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Volumn 432, Issue 7016, 2004, Pages 517-522

The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II

Author keywords

[No Author keywords available]

Indexed keywords

CELLS; ENZYMES; GENES; PATTERN RECOGNITION; RNA;

EID: 9644310314     PISSN: 00280836     EISSN: None     Source Type: Journal    
DOI: 10.1038/nature03041     Document Type: Article
Times cited : (402)

References (30)
  • 2
    • 1542334001 scopus 로고    scopus 로고
    • Phosphorylation of serine 2 within the RNA polymerase II C-terminal domain couples transcription and 3′ end processing
    • Ahn, S. H., Kim, M. & Buratowski, S. Phosphorylation of serine 2 within the RNA polymerase II C-terminal domain couples transcription and 3′ end processing. Mol. Cell 13, 67-76 (2004).
    • (2004) Mol. Cell , vol.13 , pp. 67-76
    • Ahn, S.H.1    Kim, M.2    Buratowski, S.3
  • 3
    • 0032502825 scopus 로고    scopus 로고
    • Coupling termination of transcription to messenger RNA maturation in yeast
    • Birse, C. E., Minvielle-Sebastia, L., Lee, B. A., Keller, W. & Proudfoot, N. J. Coupling termination of transcription to messenger RNA maturation in yeast. Science 280, 298-301 (1998).
    • (1998) Science , vol.280 , pp. 298-301
    • Birse, C.E.1    Minvielle-Sebastia, L.2    Lee, B.A.3    Keller, W.4    Proudfoot, N.J.5
  • 4
    • 1542290655 scopus 로고    scopus 로고
    • Transitions in RNA polymerase II elongation complexes at the 3′ ends of genes
    • Kim, M., Ahn, S. H., Krogan, N. J., Greenblatt, J. F. & Buratowski, S. Transitions in RNA polymerase II elongation complexes at the 3′ ends of genes. EMBO J. 23, 354-364 (2004).
    • (2004) EMBO J. , vol.23 , pp. 354-364
    • Kim, M.1    Ahn, S.H.2    Krogan, N.J.3    Greenblatt, J.F.4    Buratowski, S.5
  • 5
    • 0024375426 scopus 로고
    • A CCAAT box sequence in the adenovirus major late promoter functions as part of an RNA polymerase 11 termination signal
    • Connelly, S. & Manley, J. L. A CCAAT box sequence in the adenovirus major late promoter functions as part of an RNA polymerase 11 termination signal. Cell 57, 561-571 (1989).
    • (1989) Cell , vol.57 , pp. 561-571
    • Connelly, S.1    Manley, J.L.2
  • 6
    • 0024562757 scopus 로고
    • How RNA polymerase II terminates transcription in higher eukaryotes
    • Proudfoot, N. J. How RNA polymerase II terminates transcription in higher eukaryotes. Trends Biochem. Sci. 14, 105-110 (1989).
    • (1989) Trends Biochem. Sci. , vol.14 , pp. 105-110
    • Proudfoot, N.J.1
  • 7
    • 0035692614 scopus 로고    scopus 로고
    • Multiple regulators of Ty1 transposition in Saccharomyces cerevisiae have conserved roles in genome maintenance
    • Scholes, D. T., Banerjee, M., Bowen, B. & Curcio, M. J. Multiple regulators of Ty1 transposition in Saccharomyces cerevisiae have conserved roles in genome maintenance. Genetics 159, 1449-1465 (2001).
    • (2001) Genetics , vol.159 , pp. 1449-1465
    • Scholes, D.T.1    Banerjee, M.2    Bowen, B.3    Curcio, M.J.4
  • 8
    • 0036143156 scopus 로고    scopus 로고
    • Systematic identification of novel protein domain families associated with nuclear functions
    • Doerks, T., Copley, R. R., Schultz, J., Ponting, C. P. & Bork, P. Systematic identification of novel protein domain families associated with nuclear functions. Genome Res. 12, 47-56 (2002).
    • (2002) Genome Res. , vol.12 , pp. 47-56
    • Doerks, T.1    Copley, R.R.2    Schultz, J.3    Ponting, C.P.4    Bork, P.5
  • 9
    • 3142615882 scopus 로고    scopus 로고
    • Recognition of RNA polymerase II carboxy-terminal domain by 3′-RNA-processing factors
    • Meinhart, A. & Cramer, P. Recognition of RNA polymerase II carboxy-terminal domain by 3′-RNA-processing factors. Nature 430, 223-226 (2004).
    • (2004) Nature , vol.430 , pp. 223-226
    • Meinhart, A.1    Cramer, P.2
  • 10
    • 0035861532 scopus 로고    scopus 로고
    • Systematic genetic analysis with ordered arrays of yeast deletion mutants
    • Tong, A. H. et al. Systematic genetic analysis with ordered arrays of yeast deletion mutants. Science 294, 2364-2368 (2001).
    • (2001) Science , vol.294 , pp. 2364-2368
    • Tong, A.H.1
  • 11
    • 0029091310 scopus 로고
    • The yeast carboxyl-terminal repeat domain kinase CTDK-I is a divergent cyclin-cyclin-dependent kinase complex
    • Sterner, D. E., Lee, J. M., Hardin, S. E. & Greenleaf, A. L. The yeast carboxyl-terminal repeat domain kinase CTDK-I is a divergent cyclin-cyclin-dependent kinase complex. Mol. Cell. Biol. 15, 5716-5724 (1995).
    • (1995) Mol. Cell. Biol. , vol.15 , pp. 5716-5724
    • Sterner, D.E.1    Lee, J.M.2    Hardin, S.E.3    Greenleaf, A.L.4
  • 12
    • 0036930748 scopus 로고    scopus 로고
    • The RNA polymerase II CTD kinase CTDK-1 affects pre-mRNA 3′ cleavage/polyadenylation through the processing component Ptilp
    • Skaar, D. A. & Greenleaf, A. L. The RNA polymerase II CTD kinase CTDK-1 affects pre-mRNA 3′ cleavage/polyadenylation through the processing component Ptilp. Mol. Cell 10, 1429-1439 (2002).
    • (2002) Mol. Cell , vol.10 , pp. 1429-1439
    • Skaar, D.A.1    Greenleaf, A.L.2
  • 13
    • 0038182509 scopus 로고    scopus 로고
    • PtiIp and Ref2p found in association with themRNA 3′ end formation complex direct snoRNA maturation
    • Dheur, S. et al. PtiIp and Ref2p found in association with themRNA 3′ end formation complex direct snoRNA maturation. EMBO J. 22, 2831-2840 (2003).
    • (2003) EMBO J. , vol.22 , pp. 2831-2840
    • Dheur, S.1
  • 14
    • 0041856309 scopus 로고    scopus 로고
    • Organization and function of APT, a subcomplex of the yeast cleavage and polyadenylation factor involved in the formation of mRNA and small nucleolar RNA 3′-ends
    • Nedea, E. et al. Organization and function of APT, a subcomplex of the yeast cleavage and polyadenylation factor involved in the formation of mRNA and small nucleolar RNA 3′-ends. J. Biol. Chem. 278, 33000-33010 (2003).
    • (2003) J. Biol. Chem. , vol.278 , pp. 33000-33010
    • Nedea, E.1
  • 15
    • 0031935899 scopus 로고    scopus 로고
    • Processing of the precursors to small nucleolar RNAs and rRNAs requires common components
    • Petfalski, E., Dandekar, T., Henry, Y. & Tollervey, D. Processing of the precursors to small nucleolar RNAs and rRNAs requires common components. Mol. Cell. Biol. 18, 1181-1189 (1998).
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 1181-1189
    • Petfalski, E.1    Dandekar, T.2    Henry, Y.3    Tollervey, D.4
  • 16
    • 0032906632 scopus 로고    scopus 로고
    • Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Ratlp and RNase III in yeast
    • Qu, L. H. et al. Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Ratlp and RNase III in yeast. Mol. Cell. Biol. 19, 1144-1158 (1999).
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 1144-1158
    • Qu, L.H.1
  • 17
    • 0034073993 scopus 로고    scopus 로고
    • Saccharomyces cerevisiae RA11 (YGL246c) is homologous to human DOM3Z and encodes a protein that binds the nuclear exoribonuclease Rat1p
    • Xue, Y. et al. Saccharomyces cerevisiae RA11 (YGL246c) is homologous to human DOM3Z and encodes a protein that binds the nuclear exoribonuclease Rat1p. Mol. Cell. Biol 20, 4006-4015 (2000).
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 4006-4015
    • Xue, Y.1
  • 18
    • 0026655521 scopus 로고
    • Isolation and characterization of RAT1: An essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA
    • Amberg, D. C., Goldstein, A. L. & Cole, C. N. Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA. Genes Dev. 6, 1173-1189 (1992).
    • (1992) Genes Dev. , vol.6 , pp. 1173-1189
    • Amberg, D.C.1    Goldstein, A.L.2    Cole, C.N.3
  • 19
    • 0036723624 scopus 로고    scopus 로고
    • Coupling of termination, 3′ processing, and mRNA export
    • Hammell, C. M. et al. Coupling of termination, 3′ processing, and mRNA export. Mol. Cell. Biol. 22, 6441-6457 (2002).
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 6441-6457
    • Hammell, C.M.1
  • 21
    • 0034664803 scopus 로고    scopus 로고
    • Identification of a regulated pathway for nuclear pre-mRNA turnover
    • Bousquet-Antonelli, C., Presutti, C. &Tollervey, D. Identification of a regulated pathway for nuclear pre-mRNA turnover. Cell 102, 765-775 (2000).
    • (2000) Cell , vol.102 , pp. 765-775
    • Bousquet-Antonelli, C.1    Presutti, C.2    Tollervey, D.3
  • 22
    • 0042632964 scopus 로고    scopus 로고
    • Degradation of normal mRNA in the nucleus of Saccharomyces cerevisiae
    • Das, B., Butler, J. S. & Sherman, F. Degradation of normal mRNA in the nucleus of Saccharomyces cerevisiae. Mol. Cell. Biol. 23, 5502-5515 (2003).
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 5502-5515
    • Das, B.1    Butler, J.S.2    Sherman, F.3
  • 23
    • 0034679725 scopus 로고    scopus 로고
    • Transcriptional termination and coupled polyadenylation in vitro
    • Yonaha, M. & Proudfoot, N. J. Transcriptional termination and coupled polyadenylation in vitro. EMBO J. 19, 3770-3777 (2000).
    • (2000) EMBO J. , vol.19 , pp. 3770-3777
    • Yonaha, M.1    Proudfoot, N.J.2
  • 24
    • 0032567081 scopus 로고    scopus 로고
    • Dissecting the regulatory circuitry of a eukaryotic genome
    • Holstege, F. C. et al. Dissecting the regulatory circuitry of a eukaryotic genome. Cell 95,717-7281 (1998).
    • (1998) Cell , vol.95 , pp. 717-7281
    • Holstege, F.C.1
  • 25
    • 0032794289 scopus 로고    scopus 로고
    • Active-site mutations in the XrnIp exoribonuclease of Saccharomyces cerevisiae reveal a specific role in meiosis
    • Solinger, J. A., Pascolini, D. & Heyer, W. D. Active-site mutations in the XrnIp exoribonuclease of Saccharomyces cerevisiae reveal a specific role in meiosis. Mol. Cell. Biol. 19, 5930-5942 (1999).
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 5930-5942
    • Solinger, J.A.1    Pascolini, D.2    Heyer, W.D.3
  • 26
    • 0037031891 scopus 로고    scopus 로고
    • RNA polymerase II transcription complexes may become arrested if the nascent RNA is shortened to less than 50 nucleotides
    • Ujvari, A., Pal, M. & Luse, D. S. RNA polymerase II transcription complexes may become arrested if the nascent RNA is shortened to less than 50 nucleotides, J. Biol. Chem. 277, 32527-32537 (2002).
    • (2002) J. Biol. Chem. , vol.277 , pp. 32527-32537
    • Ujvari, A.1    Pal, M.2    Luse, D.S.3
  • 27
    • 9644308046 scopus 로고    scopus 로고
    • Human 5′ → 3′ exonuclease XRN2 promotes transcription termination from co-transcriptional cleavage sites
    • doi: 10.1038/nature 03035 (this issue)
    • West, S., Gromak, N. & Proudfpot, N. Human 5′ → 3′ exonuclease XRN2 promotes transcription termination from co-transcriptional cleavage sites. Nature doi: 10.1038/nature03035 (this issue).
    • Nature
    • West, S.1    Gromak, N.2    Proudfpot, N.3
  • 28
    • 0036787862 scopus 로고    scopus 로고
    • RNA polymerase II elongation factors of Saccharomyces cerevisiae: A targeted proteomics approach
    • Krogan, N. J. et al. RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach. Mol. Cell. Biol. 22, 6979-6992 (2002).
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 6979-6992
    • Krogan, N.J.1
  • 29
    • 0032721092 scopus 로고    scopus 로고
    • Pta1, a component of yeast CF II, is required for both cleavage and poly(A) addition of mRNA precursor
    • Zhao, J., Kessler, M., Helmling, S., O'Connor, J. P. & Moore, C. Pta1, a component of yeast CF II, is required for both cleavage and poly(A) addition of mRNA precursor. Mol. Cell. Biol. 19, 7733-7740 (1999).
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 7733-7740
    • Zhao, J.1    Kessler, M.2    Helmling, S.3    O'Connor, J.P.4    Moore, C.5
  • 30
    • 0030699475 scopus 로고    scopus 로고
    • Yeast microarrays for genome wide parallel genetic and gene expression analysis
    • Lashkari, D. A. et al. Yeast microarrays for genome wide parallel genetic and gene expression analysis. Proc. Natl Acad. Sci. USA 94, 13057-13062 (1997).
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 13057-13062
    • Lashkari, D.A.1


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