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Volumn 3, Issue 2, 2010, Pages

A Transcript Accounting from Diverse Tissues of a Cultivated Strawberry

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EID: 85164797536     PISSN: None     EISSN: 19403372     Source Type: Journal    
DOI: 10.3835/plantgenome2010.02.0003     Document Type: Article
Times cited : (21)

References (34)
  • 2
    • 0036794848 scopus 로고    scopus 로고
    • Gene expression analysis of strawberry achene and receptacle maturation using DNA microarrays
    • Aharoni, A., and O'Connell, A.P. 2002. Gene expression analysis of strawberry achene and receptacle maturation using DNA microarrays. J. Exp. Bot. 53:2073–2087.10.1093/jxb/erf026. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000178254300008&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2002) J. Exp. Bot. , vol.53 , pp. 2073-2087
    • Aharoni, A.1    O'Connell, A.P.2
  • 3
    • 0001579244 scopus 로고
    • Cytogenetics and evolution in American Fragaria
    • Bringhurst, R.S. 1990. Cytogenetics and evolution in American Fragaria. HortScience 24:879–881.
    • (1990) HortScience , vol.24 , pp. 879-881
    • Bringhurst, R.S.1
  • 4
    • 0034492448 scopus 로고    scopus 로고
    • ‘Strawberry Festival’ strawberry
    • Chandler, C., Legard, D., Dunigan, D., Crocker, T., and Sims, T. 2000. ‘Strawberry Festival’ strawberry. HortScience 35:1366–1367.http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000166181400050&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2000) HortScience , vol.35 , pp. 1366-1367
    • Chandler, C.1    Legard, D.2    Dunigan, D.3    Crocker, T.4    Sims, T.5
  • 5
    • 51249169259 scopus 로고
    • A simple and efficient method for isolating RNA from pine trees
    • Chang, S., Puryear, J., and Cairney, J. 1993. A simple and efficient method for isolating RNA from pine trees. Plant Mol. Biol. Rep. 11:113–116.10.1007/BF02670468
    • (1993) Plant Mol. Biol. Rep. , vol.11 , pp. 113-116
    • Chang, S.1    Puryear, J.2    Cairney, J.3
  • 6
    • 0036137277 scopus 로고    scopus 로고
    • DNA sequence quality trimming and vector removal
    • Chou, H.H., and Holmes, M.H. 2001. DNA sequence quality trimming and vector removal. Bioinformatics 17:1093–1104.10.1093/bioinformatics/17.12.1093. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000173050500002&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2001) Bioinformatics , vol.17 , pp. 1093-1104
    • Chou, H.H.1    Holmes, M.H.2
  • 7
    • 24644503098 scopus 로고    scopus 로고
    • Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research
    • Conesa, A., Götz, S., García-Gómez, J.M., Terol, J., Talón, M., and Robles, M. 2005. Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21:3674–3676.10.1093/bioinformatics/bti610. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000231694600016&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2005) Bioinformatics , vol.21 , pp. 3674-3676
    • Conesa, A.1    Götz, S.2    García-Gómez, J.M.3    Terol, J.4    Talón, M.5    Robles, M.6
  • 8
    • 7044236524 scopus 로고
    • Tobacco streak virus in black raspberry
    • Converse, R.H. 1972. Tobacco streak virus in black raspberry. Phytopathology 62:1001–1004.10.1094/Phyto-62-1001. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1972N538900012&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (1972) Phytopathology , vol.62 , pp. 1001-1004
    • Converse, R.H.1
  • 10
    • 34250837815 scopus 로고    scopus 로고
    • Strawberry genes and genomics
    • Folta, K.M., and Davis, T.M. 2006. Strawberry genes and genomics. Crit. Rev. Plant Sci. 25:399–415.10.1080/07352680600824831. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000240635800001&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2006) Crit. Rev. Plant Sci. , vol.25 , pp. 399-415
    • Folta, K.M.1    Davis, T.M.2
  • 11
    • 33749001556 scopus 로고    scopus 로고
    • Transformation of strawberry: The basis for translational genomics in Rosaceae
    • Folta, K.M., and Dhingra, A. 2006. Transformation of strawberry: The basis for translational genomics in Rosaceae. InVitro Cell. Dev. Biol. Plant 42:482–490.10.1079/IVP2006807
    • (2006) InVitro Cell. Dev. Biol. Plant , vol.42 , pp. 482-490
    • Folta, K.M.1    Dhingra, A.2
  • 12
    • 23944490730 scopus 로고    scopus 로고
    • Expressed sequence tags (ESTs) and simple sequence repeat (SSR) markers from octoploid strawberry (Fragaria x ananassa)
    • Folta, K.M., Staton, M., Stewart, P.J., Jung, S., Bies, D.H., Jesudurai, C., and Main, D. 2005. Expressed sequence tags (ESTs) and simple sequence repeat (SSR) markers from octoploid strawberry (Fragaria x ananassa). BMC Plant Biol. 5:12.10.1186/1471-2229-5-S1-S12
    • (2005) BMC Plant Biol. , vol.5 , pp. 12
    • Folta, K.M.1    Staton, M.2    Stewart, P.J.3    Jung, S.4    Bies, D.H.5    Jesudurai, C.6    Main, D.7
  • 13
    • 34247401269 scopus 로고    scopus 로고
    • Independently evolving species in asexual bdelloid rotifers
    • see, verified 29 July 2010
    • Fontaneto, D., Herniou, E.A., Boschetti, C., Caprioli, M., Melone, G., Ricci, C., and Barracloug, T.G. 2007. Independently evolving species in asexual bdelloid rotifers. PLoS Biol. 5(4): e87; see http://www.plosbiology.org/article/info:doi%2F10.1371%2Fjournal.pbio.0050087; verified 29 July 2010. 10.1371/journal.pbio.0050087
    • (2007) PLoS Biol. , vol.5 , Issue.4
    • Fontaneto, D.1    Herniou, E.A.2    Boschetti, C.3    Caprioli, M.4    Melone, G.5    Ricci, C.6    Barracloug, T.G.7
  • 14
    • 7044230610 scopus 로고
    • Natural and experimental infection of Rubus with strawberry necrotic shock virus
    • Frazier, N.W. 1966. Natural and experimental infection of Rubus with strawberry necrotic shock virus. Phytopathology 56:568–569.http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A19667748300026&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (1966) Phytopathology , vol.56 , pp. 568-569
    • Frazier, N.W.1
  • 15
    • 33644915616 scopus 로고    scopus 로고
    • Two-phase flavonoid formation in developing strawberry (Fragaria x ananassa) fruit
    • Halbwirth, H., Puhl, I., Haas, U., Jezik, K., Treutter, D., and Stich, K. 2006. Two-phase flavonoid formation in developing strawberry (Fragaria x ananassa) fruit. J. Agric. Food Chem. 54:1479–1485.10.1021/jf0524170. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000235627800071&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2006) J. Agric. Food Chem. , vol.54 , pp. 1479-1485
    • Halbwirth, H.1    Puhl, I.2    Haas, U.3    Jezik, K.4    Treutter, D.5    Stich, K.6
  • 16
    • 0032849859 scopus 로고    scopus 로고
    • CAP3: A DNA sequence assembly program
    • Huang, X.Q., and Madan, A. 1999. CAP3: A DNA sequence assembly program. Genome Res. 9:868–877.10.1101/gr.9.9.868. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000082946400010&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (1999) Genome Res. , vol.9 , pp. 868-877
    • Huang, X.Q.1    Madan, A.2
  • 17
    • 77449117251 scopus 로고    scopus 로고
    • Strawberry genomics: Botanical history, cultivation, traditional breeding and new technologies
    • p., Folta, K.M., Gardiner, S.E., (ed.), Springer, New York
    • Hummer, K., and Hancock, J.F. 2009. Strawberry genomics: Botanical history, cultivation, traditional breeding and new technologies. p. 238–495. In Folta, K.M., and Gardiner, S.E. (ed.) Genetics and genomics of Rosaceae. Springer, New York.
    • (2009) Genetics and genomics of Rosaceae , pp. 238-495
    • Hummer, K.1    Hancock, J.F.2
  • 18
    • 7044285498 scopus 로고
    • Seed transmission of tobacco streak virus in strawberry
    • Johnson, H.A.Jr., Converse, R.H., Amorao, A., Espejo, J.I., and Frazier, N.W. 1984. Seed transmission of tobacco streak virus in strawberry. Plant Dis. 68:390–391.10.1094/PD-69-390. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1984SP83700009&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (1984) Plant Dis. , vol.68 , pp. 390-391
    • Johnson, H.A.1    Converse, R.H.2    Amorao, A.3    Espejo, J.I.4    Frazier, N.W.5
  • 19
    • 0037014309 scopus 로고    scopus 로고
    • Aroma biosynthesis in strawberry: S-adenosylmethionine:furaneol o-methyltransferase activity in ripening fruits
    • Lavid, N., Schwab, W., Kafkas, E., Koch-Dean, M., Bar, E., Larkov, O., Ravid, U., and Lewinsohn, E. 2002. Aroma biosynthesis in strawberry: S-adenosylmethionine:furaneol o-methyltransferase activity in ripening fruits. J. Agric. Food Chem. 3:4025–4030.10.1021/jf011409q
    • (2002) J. Agric. Food Chem. , vol.3 , pp. 4025-4030
    • Lavid, N.1    Schwab, W.2    Kafkas, E.3    Koch-Dean, M.4    Bar, E.5    Larkov, O.6    Ravid, U.7    Lewinsohn, E.8
  • 21
    • 39049187246 scopus 로고    scopus 로고
    • Strawberry (Fragaria x ananassa)
    • Mezzetti, B., and Costantini, E. 2006. Strawberry (Fragaria x ananassa). Methods Mol. Biol. 344:287–295.
    • (2006) Methods Mol. Biol. , vol.344 , pp. 287-295
    • Mezzetti, B.1    Costantini, E.2
  • 22
    • 33646404085 scopus 로고    scopus 로고
    • High-efficiency transformation of the diploid strawberry (Fragaria vesca) for functional genomics
    • Oosumi, T., Gruszewski, H.A., Blischak, L.A., Baxter, A.J., Wadl, P.A., Shuman, J.L., Veilleux, R.E., and Shulaev, V. 2006. High-efficiency transformation of the diploid strawberry (Fragaria vesca) for functional genomics. Planta 223:1219–1230.10.1007/s00425-005-0170-3. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000237335300011&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2006) Planta , vol.223 , pp. 1219-1230
    • Oosumi, T.1    Gruszewski, H.A.2    Blischak, L.A.3    Baxter, A.J.4    Wadl, P.A.5    Shuman, J.L.6    Veilleux, R.E.7    Shulaev, V.8
  • 23
    • 68149167809 scopus 로고    scopus 로고
    • Flower-inhabiting Frankliniella thrips (Thysanoptera: Thripidae), pesticides, and fusarium hardlock in cotton
    • Osekre, E.A., Wright, D.L., Marois, J.J., and Funderburk, J. 2009a. Flower-inhabiting Frankliniella thrips (Thysanoptera: Thripidae), pesticides, and fusarium hardlock in cotton. J. Econ. Entomol. 102:887–896.10.1603/029.102.0305. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000266641700005&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2009) J. Econ. Entomol. , vol.102 , pp. 887-896
    • Osekre, E.A.1    Wright, D.L.2    Marois, J.J.3    Funderburk, J.4
  • 24
    • 69849113093 scopus 로고    scopus 로고
    • Population dynamics and within-plant distribution of Frankliniella spp. thrips (Thysanoptera: Thripidae) in cotton
    • Osekre, E.A., Wright, D.L., Marois, J.J., and Funderburk, J. 2009b. Population dynamics and within-plant distribution of Frankliniella spp. thrips (Thysanoptera: Thripidae) in cotton. Environ. Entomol. 38:1205–1210.10.1603/022.038.0430. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000268659500030&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2009) Environ. Entomol. , vol.38 , pp. 1205-1210
    • Osekre, E.A.1    Wright, D.L.2    Marois, J.J.3    Funderburk, J.4
  • 25
    • 0037460985 scopus 로고    scopus 로고
    • TIGR Gene Indices clustering tools (TGICL): A software system for fast clustering of large EST datasets
    • Pertea, G., Huang, X.Q., Liang, F., Antonescu, V., Sultana, R., Karamycheva, S., Lee, Y., White, J., Cheung, F., Parvizi, B., Tsai, J., and Quackenbush, J. 2003. TIGR Gene Indices clustering tools (TGICL): A software system for fast clustering of large EST datasets. Bioinformatics 19:651–652.10.1093/bioinformatics/btg034. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000181964600014&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2003) Bioinformatics , vol.19 , pp. 651-652
    • Pertea, G.1    Huang, X.Q.2    Liang, F.3    Antonescu, V.4    Sultana, R.5    Karamycheva, S.6    Lee, Y.7    White, J.8    Cheung, F.9    Parvizi, B.10    Tsai, J.11    Quackenbush, J.12
  • 26
  • 27
    • 38749091304 scopus 로고    scopus 로고
    • Pyrobayes: An improved base caller for SNP discovery in pyrosequences
    • Quinlan, A.R., Stewart, D.A., Stromberg, M.P., and Marth, G.T. 2008. Pyrobayes: An improved base caller for SNP discovery in pyrosequences. Nat. Methods 5:179–181.10.1038/nmeth.1172. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000252750700021&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2008) Nat. Methods , vol.5 , pp. 179-181
    • Quinlan, A.R.1    Stewart, D.A.2    Stromberg, M.P.3    Marth, G.T.4
  • 28
    • 33745453677 scopus 로고    scopus 로고
    • FaQR, required for the biosynthesis of the strawberry flavor compound 4-hydroxy-2,5-dimethyl-3(2H)-furanone, encodes an enone oxidoreductase
    • Raab, T., López-Ráez, J.A., Klein, D., Caballero, J.L., Moyano, E., Schwab, W., and Muñoz-Blanco, J. 2006. FaQR, required for the biosynthesis of the strawberry flavor compound 4-hydroxy-2,5-dimethyl-3(2H)-furanone, encodes an enone oxidoreductase. Plant Cell 18:1023–1037.10.1105/tpc.105.039784. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000236726200018&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2006) Plant Cell , vol.18 , pp. 1023-1037
    • Raab, T.1    López-Ráez, J.A.2    Klein, D.3    Caballero, J.L.4    Moyano, E.5    Schwab, W.6    Muñoz-Blanco, J.7
  • 31
    • 73249122662 scopus 로고    scopus 로고
    • Fragaria vesca, A useful tool for Rosaceae genomics
    • P., Ventura, CA. 9–12 Feb. 2007., American Society for Horticultural Science, Alexandria, VA
    • Slovin, J., and Rabinowicz, P.D. 2007. Fragaria vesca, A useful tool for Rosaceae genomics. P. 112–117. In North American Strawberry Symposium, 6th, Ventura, CA. 9–12 Feb. 2007. American Society for Horticultural Science, Alexandria, VA.
    • (2007) North American Strawberry Symposium, 6th , pp. 112-117
    • Slovin, J.1    Rabinowicz, P.D.2
  • 32
    • 21344434773 scopus 로고    scopus 로고
    • An alcohol acyl transferase from apple (cv. Royal Gala), MpAAT1, produces esters involved in apple fruit flavor
    • Souleyre, E.J., Greenwood, D.R., Friel, E.N., Karunairetnam, S., and Newcomb, R.D. 2005. An alcohol acyl transferase from apple (cv. Royal Gala), MpAAT1, produces esters involved in apple fruit flavor. FEBS J. 272:3132–3144.10.1111/j.1742-4658.2005.04732.x. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000230088000021&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2005) FEBS J. , vol.272 , pp. 3132-3144
    • Souleyre, E.J.1    Greenwood, D.R.2    Friel, E.N.3    Karunairetnam, S.4    Newcomb, R.D.5
  • 33
    • 18744383071 scopus 로고    scopus 로고
    • GMAP: A genomic mapping and alignment program for mRNA and EST sequences
    • Wu, T.D., and Watanabe, C.K. 2005. GMAP: A genomic mapping and alignment program for mRNA and EST sequences. Bioinformatics 21:1859–1875.http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000228783000016&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2005) Bioinformatics , vol.21 , pp. 1859-1875
    • Wu, T.D.1    Watanabe, C.K.2
  • 34
    • 0034053725 scopus 로고    scopus 로고
    • A greedy algorithm for aligning DNA sequences
    • Zhang, Z., Schwartz, S., Wagner, L., and Miller, W. 2000. A greedy algorithm for aligning DNA sequences. J. Comput. Biol. 7:203–214.10.1089/10665270050081478. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000087833300012&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2000) J. Comput. Biol. , vol.7 , pp. 203-214
    • Zhang, Z.1    Schwartz, S.2    Wagner, L.3    Miller, W.4


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