Strawberry genes and genomics

Critical Reviews in Plant Sciences

Volumn 25, Issue 5, 2006, Pages 399-415

  Folta, Kevin M ^a   Davis, Thomas M ^b  

^a UNIVERSITY OF FLORIDA   (United States)

^b UNIVERSITY OF NEW HAMPSHIRE   (United States)

Author keywords

Cold tolerance; Disease; Flavor production; Flower development; Fragaria; Freezing tolerance; Functional genomics; Linkage mapping; Molecular markers; Nutrition; Pests; Photoperiodic flowering; Polyploid; Ripening; Rosaceae; Strawberry; Structural genomics; Volatiles

Indexed keywords

FRAGARIA; FRAGARIA X ANANASSA; ROSACEAE;

EID: 34250837815     PISSN: 07352689     EISSN: 15497836     Source Type: Book Series    
DOI: 10.1080/07352680600824831     Document Type: Review

References (145)

1. Agius, F., Gonzalez-Lamothe, R., Caballero, J. L., Munoz-Blanco, J., Botella, M. A., and Valpuesta, V. 2003. Engineering increased vitamin C levels in plants by overexpression of a D-galacturonic acid reductase. Nature Biotechnol. 21: 177-181.
2. Aharoni, A., De Vos, C. H., Wein, M., Sun, Z., Greco, R., Kroon, A., Mol, J. N., and O'Connell, A. P. 2001. The strawberry FaMYB1 transcription factor suppresses anthocyanin and flavonol accumulation in transgenic tobacco. Plant J. 28: 319-332.
3. Aharoni, A., Giri, A. P., Verstappen, F. W., Bertea, C. M., Sevenier, R., Sun, Z., Jongsma, M. A., Schwab, W., and Bouwmeester, H. J. 2004. Gain and loss of fruit flavor compounds produced by wild and cultivated strawberry species. Plant Cell 16: 3110-3131.
4. Aharoni, A., Keizer, L. C., Bouwmeester, H. J., Sun, Z., Alvarez-Huerta, M., Verhoeven, H. A., Blaas, J., van Houwelingen, A. M., De Vos, R. C., van der Voet, H., Jansen, R. C., Guis, M., Mol, J., Davis, R. W., Schena, M., van Tunen, A. J., and O'Connell, A. P. 2000. Identification of the SAAT gene involved in strawberry flavor biogenesis by use of DNA microarrays. Plant Cell 12: 647-662.
5. Aharoni, A., Keizer, L. C., Van Den Broeck, H. C., Blanco-Portales, R., Munoz-Blanco, J., Bois, G., Smit, P., De Vos, R. C., and O'Connell, A. P. 2002. Novel insight into vascular, stress, and auxin-dependent and -independent gene expression programs in strawberry, a non-climacteric fruit. Plant Physiol. 129: 1019-1031.
6. Aharoni, A., van Tunen, A., Rosin, F., and Hannapel, D. 1999. Isolation of an AGAMOUS cDNA (STAG1) from Strawberry. Plant Physiol. 121: 686.
7. Ahmadi, H., and Bringhurst, R. S. 1991. Genetics of sex expression in Fragaria species. Am. J. Bot. 78: 504-514.
8. Ahmadi, H., Bringhurst, R. S., and Voth, V. 1990. Modes of inheritance of photoperiodism in Fragaria. J. Amer. Soc. Hort. Sci. 115: 146-152.
9. Akiyama, Y., Yamamoto, Y., Ohmido, N., Oshima, M., and Fukui, K. 2001. Estimation of the nuclear DNA content of strawberries (Fragaria spp.) compared with Arabidopsis thaliana by using dual-stem flow cytometry. Cytologia 66: 431-436.
10. Albani, M. C., Battey, N. H., and Wilkinson, M. J. 2004. The development of ISSR-derived SCAR markers around the SEASONAL FLOWERING LOCUS (SFL) in Fragaria vesca. Theor. Appl. Genet. 109: 571-579.
11. Alsheikh, M. K., Suso, H. P., Robson, M., Battey, N. H., and Wetten, A. 2002. Appropriate choice of antibiotic and Agrobacterium strain improves transformation of anti biotic-sensitive Fragaria vesca and F.v. semperflorens. Plant Cell Rep. 20: 1173-1180.
12. Antonius, K., and Ahokus, H. 1996. Flow-cytometric determination of polyploid level in spontaneous clones of strawberries. Hereditas 124: 285.
13. Arabidopsis Genome Initiative. 2000. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815.
14. Asao, H. G., Nishizawa, Y., Arai, S., Sato, T., Hirai, M., Yoshida, K., Shinmyo, A., and Hibi, T. 1997. Enhanced resistance against a fungal pathogen Sphaerotheca fumuli in transgenic strawberry expressing a rice chitinase gene. Plant Biotechnol. 14: 145-149.
15. Ashley, M. V., Wilk, J. A., Styan, S. M., Craft, K. J., Jones, K. L., Feldheim, K. A., Lewers, K. S., and Ashman, T. L. 2003. High variability and disomic segregation of microsatellites in the octoploid Fragaria virginiana Mill. (Rosaceae). Theor. Appl. Genet. 107: 1201-1207.
16. Atkinson, H. J., Urwin, P. E., and McPherson, M. J. 2003. Engineering plants for nematode resistance. Ann. Rev. Phytopath. 41: 615-639.
17. Balogh, A., Koncz, T., Tisza, V., Kiss, E., and Heszky, L. 2005. The effect of 1-MCP on the expression of several ripening-related genes in strawberries. Hortscience 40: 2088-2090.
18. Battey, N., Le Meire, P., Tehranifar, A., Cecik, C., Taylor, S., Shrives, K., Hadley, P., Greenland, A., Darby, J., and Wilkinson, M. 1998. Genetic and environmental control of flowering in strawberry. In: Genetic and Environmental Manipulation of Horticultural Crops. pp. 111-131. G.D. Cockshull KE, Seymour GB, Thomas B, (Ed.) CAB International, Wallingford, UK.
19. Bauer, A. 1993. Progress in breeding decaploid Fragaria xvescana. Acta Hort. 348: 60-63.
20. Bennett, M., and Leitch, I. 2004. Angiosperm DNA C-values database, release 5.0 (ed. http://www.rbgkew.org.uk/cval/homepage.html).
21. Bennett, M. D., Leitch, I. J., Price, H. J., and Johnston, J. S. 2003. Comparisons with Caenorhabditis (approximately 100 Mb) and Drosophila (approximately 175 Mb) using flow cytometry show genome size in Arabidopsis to be approximately 157 Mb and thus approximately 25% larger than the Arabidopsis genome initiative estimate of approximately 125 Mb. Ann. Bot. (Lond) 91: 547-557.
22. Blanco-Portales, R., Medina-Escobar, N., Lopez-Raez, J. A., Gonzalez-Reyes, J. A., Villalba, J. M., Moyano, E., Caballero, J. L., and Munoz-Blanco, J. 2002. Cloning, expression and immunolocalization pattern of a cinnamyl alcohol dehydrogenase gene from strawberry (Fragaria xananassa cv. Chandler). J. Exp. Bot. 53: 1723-1734.
23. Bringhurst, R. S. 1990. Cytogenetics and evolution in American Fragaria. Hortscience 25: 879-881.
24. Bringhurst, R. S., and Gill, T. 1970. Origin of Fragaria-polyploids. 2. unreduced and doubled-unreduced gametes. Am. J. Bot. 57: 969-976.
25. Brown, T., and Wareing, P. F. 1965a. Genetical control of everbearing habit and three other characters in varieties of Fragaria vesca. Euphytica 14: 97-112.
26. Byrne, D., and Jelenkovic, G. 1976. Cytological diploidization in cultivated octoploid strawberry Fragaria xananassa. Can. J. Genet. Cytol. 18: 653-659.
27. Chalavi, V., Tabaeizadeh, Z., and Thibodeau, P. 2003. Enhanced resistance to Verticillium dahliae in transgenic strawberry plants expressing a Lycopersicon chilense chitinase gene. J. Am. Soc. Hort. Sci. 128: 747-753.
28. Cipriani, G., and Testolin, R. 2004. Isolation and characterization of microsatellite loci in Fragaria. Mol. Ecol. Notes 4: 366-368.
29. Civello, P. M., Powell, A. L., Sabehat, A., and Bennett, A. B. 1999. An expansin gene expressed in ripening strawberry fruit. Plant Physiol. 121: 1273-1280.
30. Dale, A., and Sjulin, T. M. 1990. Few cytoplasms contribute to North-American strawberry cultivars. Hortscience 25: 1341-1342.
31. Darrow, G. 1966. The Strawberry. Holt, Rinehart and Winston, New York.
32. Davey, M. W., Gilot, C., Persiau, G., Ostergaard, J., Han, Y., Bauw, G. C., and Van Montagu, M. C. 1999. Ascorbate biosynthesis in Arabidopsis cell suspension culture. Plant Physiol. 121: 535-543.
33. Davis, T. M., DeMeglio, L. M., Yang, R., Styan, S. M. N., and Lewers, K. L. 2006. Assessment of SSR marker transfer from the cultivated strawberry to diploid strawberry species: Functionality, linkage group assignment, and use in diversity analysis. J. Am. Soc. Hort. Sci. 131: 506-512.
34. Davis, T. M., and Yu, H. 1997. A linkage map of the diploid strawberry, Fragaria vesca. J. Hered. 88: 215-221.
35. Davis, T. M., Yu, H., Haigis, K. M., and McGowan, P. J. 1995. Template mixing-a method of enhancing detection and interpretation of codominant rapd markers. Theor. Appl. Genet. 91: 582-588.
36. Deng, C., and Davis, T. M. 2001. Molecular identification of the yellow fruit color (c) locus in diploid strawberry: A candidate gene approach. Theor. Appl. Genet. 103: 316-322.
37. Dhingra, A., and Folta, K. 2005. ASAP: Amplification, sequencing and annotation of plastomes. BMC- Genomics 6: 176.
38. El Mansouri, I., Mercado, J. A., Valpuesta, V., LopezAranda, J. M., PliegoAlfaro, F., and Quesada, M. A. 1996. Shoot regeneration and Agrobacterium-mediated transformation of Fragaria vesca L. Plant Cell Rep. 15: 642-646.
39. Fedorova, N. 1946. Crossability and phylogenetic relations in the main European species of Fragaria. Comp. Rend. Acad. Sci. USSR 53: 545-547.
40. Firsov, A. P., and Dolgov, S. V. 1998. Agrobacterial transformation and transfer of the antifreeze protein gene of winter flounder to the strawberry. Acta. Hort. (ISHS) 484: 581-586.
41. Folta, K. M., and Dhingra, A. 2006. Transformation of strawberry: The basis for translational genomics in Rosaceae. In Vitro Cell. Dev. Biol.- Plant: in press.
42. Folta, K., Dhingra, A., Howard, L., Stewart, P., and Chandler, C. 2006. Characterization of LF9, an octoploid strawberry genotype selected for rapid regeneration and transformation. Planta in press.
43. Folta, K., Staton, M., Stewart, P., Jung, S., Bies, D., Jesudurai, C., and Main, D. 2005. Expressed sequence tags (ESTs) and simple sequence repeat (SSR) markers from octoploid strawberry (Fragaria xananassa). BMC- Plant Biol. 5: 12.
44. Gilmour, S. J., Zarka, D. G., Stockinger, E. J., Salazar, M. P., Houghton, J. M., and Thomashow, M. F. 1998. Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression. Plant J. 16: 433-442.
45. Gimenez, G., and Ballington, J. R. 2002. Inheritance of resistance to Colletotrichum acutatum Simmonds on runners of garden strawberry and its backcrosses. Hortscience 37: 686-690.
46. Good, X., Kellogg, J. A., Wagoner, W., Langhoff, D., Matsumura, W., and Bestwick, R. K. 1994. Reduced ethylene synthesis by transgenic tomatoes expressing S-adenosylmethionine hydrolase. Plant Mol. Biol. 26: 781-790.
47. Graham, J., Gordon, S. C., Smith, K., McNicol, R. J., and McNicol, J. W. 2002. The effect of the Cowpea trypspin inhibitor in strawberry on damage by vine weevil under field conditions. J. Hort. Sci. Biotech. 77: 33-40.
48. Hadonou, A. M., Sargent, D. J., Wilson, F., James, C. M., and Simpson, D. W. 2004. Development of microsatellite markers in Fragaria, their use in genetic diversity analysis, and their potential for genetic linkage mapping. Genome 47: 429-438.
49. Hancock, J. F. 1999. Strawberries. CABI Publishing, New York, NY.
50. Hancock, J. F., Luby, J. J., Dale, A., Callow, P. W., Serce, S., and El-Shiek, A. 2002. Utilizing wild Fragaria virginiana in strawberry cultivar development: Inheritance of photoperiod sensitivity, fruit size, gender, female fertility and disease resistance. Euphytica 126: 177-184.
51. Hanson, A. D., Rathinasabapathi, B., Rivoal, J., Burnet, M., Dillon, M. O., and Gage, D. A. 1994. Osmoprotective compounds in the Plumbaginaceae: A natural experiment in metabolic engineering of stress tolerance. Proc. Natl. Acad. Sci. USA 91: 306-310.
52. Harpster, M. H., Brummell, D. A., and Dunsmuir, P. 1998. Expression analysis of a ripening-specific, auxin-repressed endo-1, 4-beta-glucanase gene in strawberry. Plant Physiol. 118: 1307-1316.
53. Harrison, E. P., McQueen-Mason, S. J., and Manning, K. 2001. Expression of six expansin genes in relation to extension activity in developing strawberry fruit. J. Exp. Bot. 52: 1437-1446.
54. Harrison, R. E., Luby, J. J., and Furnier, G. R. 1997a. Chloroplast DNA restriction fragment variation among strawberry (Fragaria spp.) taxa. J. Am. Soc. Hort. Sci. 122: 63-68.
55. Harrison, R. E., Luby, J. J., Furnier, G. R., and Hancock, J. F. 1997b. Morphological and molecular variation among populations of octoploid Fragaria virginiana and F. chiloensis (Rosaceae) from North America. Am. J. Bot. 84: 612-620.
56. Haymes, K. M., and Davis, T. M. 1998. Agrobacterium mediated transformation of 'Alpine' Fragaria vesca, and transmission of transgenes to R1 progeny. Plant Cell Rep. 17: 279-283.
57. Haymes, K. M., Henken, B., Davis, T. M., and vandeWeg, W. E. 1997. Identification of RAPD markers linked to a Phytophthora fragariae resistance gene (Rpf1) in the cultivated strawberry. Theo. App. Genet. 94: 1097-1101.
58. Hokanson, S. C. 2001. SNiPs, chips, BACs, and YACs: Are small fruits part of the party mix? Hortscience 36: 859-871.
59. Hokanson, S. C., and Maas, J. L. 2001. Strawberry Biotechnology. In Plant Breeding Reviews, pp. 139-180. John Wiley and Sons, Inc.
60. Houde, M., Dallaire, S., N'Dong, D., and Sarhan, F. 2004. Overexpression of the acidic dehydrin WCOR410 improves freezing tolerance in transgenic strawberry leaves. Plant Biotech. J. 2: 381-387.
61. James, C. M., Wilson, F., Hadonou, A. M., and Tobutt, K. R. 2003. Isolation and characterization of polymorphic microsatellites in diploid strawberry (Fragaria vesca L.) for mapping, diversity studies and clone identification. Mol. Ecol. Notes 3: 171-173.
62. James, D. J., Passey, A. J., and Barbara, D. J. 1990. Agrobacterium mediated transformation of the cultivated strawberry (Fragaria xananassa Duch) using disarmed binary vectors. Plant Sci. 69: 79-94.
63. Jimenez-Bermudez, S., Redondo-Nevado, J., Munoz-Blanco, J., Caballero, J. L., Lopez-Aranda, J. M., Valpuesta, V., Pliego-Alfaro, F., Quesada, M. A., and Mercado, J. A. 2002. Manipulation of strawberry fruit softening by antisense expression of a pectate lyase gene. Plant Physiol. 128: 751-759.
64. Knee, M., Sargent, J. A., and Osborne, D. J. 1977. Cell wall metabolism in developing strawberry fruits. J. Exp. Bot. 28: 377-396.
65. Konieczny, A., and Ausubel, F. M. 1993. A procedure for mapping Arabidopsis mutations using codominant ecotype-specific PCR-based markers. Plant J. 4: 403-410.
66. Kunihisa, M., Fukino, N., and Matsumoto, S. 2003. Development of cleavage amplified polymorphic sequence (CAPS) markers for identification of strawberry cultivars. Euphytica 134: 209-215.
67. Kunihisa, M., Fukino, N., and Matsumoto, S. 2005. CAPS markers improved by cluster-specific amplification for identification of octoploid strawberry (Fragaria xananassa Duch.) cultivars, and their disomic inheritance. Theor. and Appl. Genet. 110: 1410-1418.
68. Kuroyanagi, M., Shimamura, E., Kim, M., Arakawa, N., Fujiwara, Y., and Otsuka, M. 2002. Effects of L-ascorbic acid on lysyl oxidase in the formation of collagen cross-links. Biosci. Biotechnol. Biochem. 66: 2077-2082.
69. Lerceteau-Kohler, E., Guerin, G., and Denoyes-Rothan, B. 2005. Identification of SCAR markers linked to Rca2 anthracnose resistance gene and their assessment in strawberry germplasm. Theor. Appl. Genet. 111: 862-870.
70. Lerceteau-Kohler, E., Guerin, G., Laigret, F., and Denoyes-Rothan, B. 2003. Characterization of mixed disomic and polysomic inheritance in the octoploid strawberry (Fragaria xananassa) using AFLP mapping. Theor. Appl. Genet. 107: 619-628.
71. Lewers, K. S., Styan, S. M. N., Hokanson, S. C., and Bassil, N. V. 2005. Strawberry GenBank-derived and genomic simple sequence repeat (SSR) markers and their utility with strawberry, blackberry, and red and black raspberry. J. Am. Soc. Hort. Sci. 130: 102-115.
72. Lin, J. and Davis, T. M. 2000. S1 analysis of long PCR heteroduplexes: Detection of chloroplast indel polymorphisms in Fragaria. Theor. App. Genet. 101: 415-420.
73. Maas, J. L. 1987. Availability of strawberry germplasm resistant to 10 United States races of Phytopthora fragariae and several isolates of Verticillium. Phytopath. 77: 1774-1774.
74. Manning, K. 1994. Changes in gene-expression during strawberry fruit ripening and their regulation by auxin. Planta 194: 62-68.
75. Manning, K. 1998. Isolation of a set of ripening-related genes from strawberry: Their identification and possible relationship to fruit quality traits. Planta 205: 622-631.
76. Martinez, M., Abraham, Z., Gambardella, M., Echaide, M., Carbonero, P., and Diaz, I. 2005. The strawberry gene Cyf1 encodes a phytocystatin with antifungal properties. J. Exp. Bot. 56: 1821-1829.
77. Martinez Zamora, M. G., Castagnaro, A. P., and Diaz Ricci, J. C. 2004. Isolation and diversity analysis of resistance gene analogues (RGAs) from cultivated and wild strawberries. Mol. Genet. Genomics 272: 480-487.
78. Marty, I., Douat, C., Tichit, L., Jungsup, K., Leustek, T., and Albagnac, G. 2000. The cystathionine-gamma-synthase gene involved in methionine biosynthesis is highly expressed and auxin-repressed during wild strawberry (Fragaria vesca L.) fruit ripening. Theor. Appl. Genet. 100: 1129-1136.
79. Mathews, H., Wagoner, W., Kellogg, J., and Bestwick, R. 1995. Genetic transformation of strawberry-Stable integration of a gene to control biosynthesis of ethylene. In Vitro Cell. Dev. Biol.-Plant 31: 36-43.
80. McNeil, S. D., Nuccio, M. L., Ziemak, M. J., and Hanson, A. D. 2001. Enhanced synthesis of choline and glycine betaine in transgenic tobacco plants that overexpress phosphoethanolamine N-methyltransferase. Proc. Natl. Acad. Sci. USA 98: 10001-10005.
81. Medina-Escobar, N., Cardenas, J., Moyano, E., Caballero, J. L., and Munoz-Blanco, J. 1997. Cloning, molecular characterization and expression pattern of a strawberry ripening-specific cDNA with sequence homology to pectate lyase from higher plants. Plant Mol. Biol. 34: 867-877.
82. Medina-Escobar, N., Cardenas, J., Munoz-Blanco, J., and Caballero, J. L. 1998. Cloning and molecular characterization of a strawberry fruit ripening-related cDNA corresponding a mRNA for a low-molecular-weight heat-shock protein. Plant Mol. Biol. 36: 33-42.
83. Mehli, L., Kjellsen, T. D., Dewey, F. M., and Hietala, A. M. 2005. A case study from the interaction of strawberry and Botrytis cinerea highlights the benefits of comonitoring both partners at genomic and mRNA level. New Phytol. 168: 465-474.
84. Mehli, L., Schaart, J. G., Kjellsen, T. D., Tran, D. H., Salentijn, E. M. J., Schouten, H. J., and Iversen, T. H. 2004. A gene encoding a polygalacturonase-inhibiting protein (PGIP) shows developmental regulation and pathogen-induced expression in strawberry. New Phytol. 163: 99-110.
85. Meyers, B. C., Dickerman, A. W., Michelmore, R. W., Sivaramakrishnan, S., Sobral, B. W., and Young, N. D. 1999. Plant disease resistance genes encode members of an ancient and diverse protein family within the nucleotide-binding superfamily. Plant J. 20: 317-332.
86. Mezzetti, B., Landi, L., Pandolfini, T., and Spena, A. 2004. The defH9-iaaM auxin-synthesizing gene increases plant fecundity and fruit production in strawberry and raspberry. BMC-Biotechnol. 4: 4.
87. Mochizuki, T., Sone, K., and Noguchi, Y. 2002. Processing quality of decaploid strawberry lines derived from Fragaria xananassa and diploid wild species. Acta Hort. 567: 239-242.
88. Monfort, A., Vilanova, S., Davis, T. M., and Arus, P. 2006. A newset of polymorphic simple sequence repeat (SSR) markers from a wild strawberry (Fragaria vesca) are transferable to other diploid Fragaria species and to Fragaria xananassa. Mol. Ecol. Notes 6: 197-200.
89. Moyano, E., Portero-Robles, I., Medina-Escobar, N., Valpuesta, V., Munoz-Blanco, J., and Caballero, J. L. 1998. A fruit-specific putative dihydroflavonol 4-reductase gene is differentially expressed in strawberry during the ripening process. Plant Physiol. 117: 711-716.
90. Nam, Y. W., Tichit, L., Leperlier, M., Cuerq, B., Marty, I., and Lelievre, J. M. 1999. Isolation and characterization of mRNAs differentially expressed during ripening of wild strawberry (Fragaria vesca L.) fruits. Plant Mol. Biol. 39: 629-636.
91. N'Dong, C. N., Ouellet, F., Houde, M., and Sarhan, F. 1997. Gene expression during cold acclimation in strawberry. Plant Cell Physiol. 38: 863-870.
92. Nehra, N. S., Chibbar, R. N., Kartha, K. K., Datla, R. S. S., Crosby, W. L., and Stushnoff, C. 1990a. Agrobacterium mediated transformation of strawberry calli and recovery of transgenic plants. Plant Cell Rep. 9: 10-13.
93. Nehra, N. S., Chibbar, R. N., Kartha, K. K., Datla, R. S. S., Crosby, W. L., and Stushnoff, C. 1990b. Genetic-transformation of strawberry by Agrobacterium tumefaciens using a leaf disk regeneration system. Plant Cell Rep. 9: 293-298.
94. Nehra, N. S., Kartha, K. K., and Stushnoff, C. 1991. Nuclear DNA content and isozyme variation in relation to morphogenic potential of strawberry (Fragaria ananassa) callus cultures. Can. J. Bot. Rev. 69: 239-244.
95. Nitsch, J. P. 1950. Growth and morphogenesis of the strawberry as related to auxin. Am. J. Bot. 37: 211-215.
96. Norman, C. S. 2005. Potential impacts of imposing methyl bromide phaseout on US strawberry growers: a case study of a nomination for a critical use exemption under the Montreal Protocol. J. Environ. Manage. 75: 167-176.
97. Nourse, S. M., Fickus, E., Cregan, P., and Hokanson, S. 2002. Development of simple sequence repeat (SSR) molecular markers in strawberry. In: Strawberry research to 2001. pp. 48-53. S. Hokanson and A. Jamieson, (Eds.) ASHS Press, Alexandria, Virginia.
98. Nyman, M., and Wallin, A. 1992. Improved culture technique for strawberry (Fragaria xananassa-Duch) protoplasts and the determination of DNA content in protoplast derived plants. Plant Cell Tissue Organ Cult. 30: 127-133.
99. Oosumi, T., Gruszewski, H. A., Blischak, L. A., Baxter, A. J., Wadl, P. A., Shuman, J. L., Veilleux, R. E., and Shulaev, V. 2005. High-efficiency transformation of the diploid strawberry (Fragaria vesca) for functional genomics. Planta 223: 1219-1230.
100. Owens, C. L., Thomashow, M. F., Hancock, J. F., and Iezzoni, A. F. 2002. CBF1 orthologs in sour cherry and strawberry and the heterologous expression of CBF1 in strawberry. J. Am. Soc. Hort. Sci. 127: 489-494.
101. Paran, I., and Michelmore, R. W. 1993. Development of Reliable Pcr-Based Markers Linked to Downy Mildew Resistance Genes in Lettuce. Theor. App. Genet. 85: 985-993.
102. Park, E. J., Jeknic, Z., Sakamoto, A., DeNoma, J., Yuwansiri, R., Murata, N., and Chen, T. H. 2004. Genetic engineering of glycinebetaine synthesis in tomato protects seeds, plants, and flowers from chilling damage. Plant J. 40: 474-487.
103. Passey, A. J., Barrett, K. J., and James, D. J. 2003. Adventitious shoot regeneration from seven commercial strawberry cultivars (Fragaria xananassa Duch.) using a range of explant types. Plant Cell Rep. 21: 397-401.
104. Perkins-Veazie, P. M. 1995. Growth and ripening of strawberry fruit. Hortic. Rev. 17: 267-297.
105. Perkins-Veazie, P. M., Huber, D. J., and Brecht, J. K. 1996. In vitro growth and ripening of strawberry fruit in the presence of ACC, STS or propylene. Ann. App. Biol. 128: 105-116.
106. Potter, D., Luby, J. J., and Harrison, R. E. 2000. Phylogenetic relationships among species of Fragaria (Rosaceae) inferred from non-coding nuclear and chloroplast DNA sequences. Syst. Bot. 25: 337-348.
107. Raab, T., Lopez-Raez, J. A., Klein, D., Caballero, J. L., Moyano, E., Schwab, W., and Munoz-Blanco, J. 2006. FaQR, Required for the biosynthesis of the strawberry flavor compound 4-Hydroxy-2,5-Dimethyl-3(2H)-Furanone, encodes an enone oxidoreductase. Plant Cell 18: 1023-1037.
108. Rajashekar, C. B., Zhou, H., Marcum, K. B., and Prakash, O. 1999. Glycine betaine accumulation and induction of cold tolerance in strawberry (Fragaria xananassa Duch.) plants. Plant Sci. 148: 175-183.
109. Reddy, A. S. N., Jena, P. K., Mukherjee, S. K., and Poovaiah, B. W. 1990. Molecular cloning of cDNAs for auxin-induced messenger-RNAs and developmental expression of the auxin-inducible genes. Plant Mol. Biol. 14: 643-653.
110. Redondo-Nevado, J., Moyano, E., Medina-Escobar, N., Caballero, J. L., and Munoz-Blanco, J. 2001. A fruit-specific and developmentally regulated endopolygalacturonase gene from strawberry (Fragaria xananassa cv. Chandler). J. Exp. Bot. 52: 1941-1945.
111. Ronaghi, M., Uhlen, M., and Nyren, P. 1998. A sequencing method based on real-time pyrophosphate. Science 281: 363, 365.
112. Rosin, F. M., Aharoni, A., Salentijn, E. M. J., Schaart, J. G., Boone, M. J., and Hannapel, D. J. 2003. Expression patterns of a putative homolog of AGAMOUS, STAG1, from strawberry. Plant Sci. 165: 959-968.
113. Rosin, F. M., and Hannapel, D. J. 1999. RNA localization of a strawberry MADS-box gene (SAG1) involved in fruit development. Hortscience 10: 119-120.
114. Sargent, D. J., Clarke, J., Simpson, D. W., Tobutt, K. R., Arus, P., Monfort, A., Vilanova, S., Denoyes-Rothan, B., Rousseau, M., Folta, K. M., Bassil, N. V., and Battey, N. H. 2006. An enhanced microsatellite map of diploid Fragaria. Theor. App. Genet. 112: 1349-1359.
115. Sargent, D. J., Davis, T. M., Tobutt, K. R., Wilkinson, M. J., Battey, N. H., and Simpson, D. W. 2004. A genetic linkage map of microsatellite, gene-specific and morphological markers in diploid Fragaria. Theor. App. Genet. 109: 1385-1391.
116. Sargent, D. J., Hadonou, A. M., and Simpson, D. W. 2003. Development and characterization of polymorphic microsatellite markers from Fragaria viridis, a wild diploid strawberry. Molec. Ecol. Notes 3: 550-552.
117. Schaart, J. G., Mehli, L., and Schouten, H. J. 2005. Quantification of allele-specific expression of a gene encoding strawberry polygalacturonase- inhibiting protein (PGIP) using pyrosequencing(TM). Plant J. 41: 493-500.
118. Schestibratov, K. A. and Dolgov, S. V. 2005. Transgenic strawberry plants expressing a thaumatin II gene demonstrate enhanced resistance to Botrytis cinerea. Scientia Hort. 106: 177-189.
119. Senanayake, Y. D. A. and Bringhurst, R. S. 1967. Origin of Fragaria polyploids. I. cytological analysis. Am. J. Bot. 54: 221-228.
120. Serce, S., and Hancock, J. F. 2005. Inheritance of day-neutrality in octoploid species of Fragaria. J. Am. Soc. Hort. Sci. 130: 580-584.
121. Shaw, D. V. 2003. Heterogeneity of segregation ratios from selfed progenies demonstrate polygenic inheritance for day neutrality in strawberry (Fragaria xananassa Duch.). J. Am. Soc. Hort. Sci. 128: 504-507.
122. Shaw, D. V., and Famula, T. R. 2005. Complex segregation analysis of day-neutrality in domestic strawberry (Fragaria xananassa Duch.). Euphytica 145: 331-338.
123. Sjulin, T. M., and Dale, A. 1987. Genetic diversity of North-American strawberry cultivars. J. Am. Soc. Hort. Sci. 112: 375-385.
124. Stafstrom, J., Ripley, B., Drake, B., Devitt, M., Stoudt, W., Krueger, M., and Lloyd, D. 1997. Dormancy-associated gene expression in pea axillary buds. Plant Physiol. 114: 1632-1632.
125. Staudt, G. 1973. Fragaria iturupensis, eine neue Erdbeerart aus Ostasien. Willdenowia 7: 101-104.
126. Staudt, G. 1989. The species of Fragaria, their taxonomy and geographic distribution. Acta Hort. 265: 23-33.
127. Staudt, G. 1999. Systematics and Geographical Distribution of the American Strawberry Species. In Taxonomic Studies in the Genus Fragaria(Rosaceae: Potentilleae), pp. 162. University of California Press.
128. Staudt, G. 2003. Notes on Asiatic species III: Fragaria orientalis Losinsk. and Fragaria mandshurica spec. nov. Bot. Jahrb. Syst. 124: 397-419.
129. Staudt, G. 2005. Notes on the Asiatic Fragaria species: IV. Fragaria iinumae. Bot. Jahrb. Syst. 126: 163-175.
130. Staudt, G., and Dickore, W. B. 2001. Notes on Asiatic Fragaria species II: Fragaria pentaphylla Losinsk. and Fragarai tibetica spec. nov. Bot. Jahrb. Syst. 123: 341-354.
131. Staudt, G., DiMeglio, L., Davis, T., and Gerstberger, P. 2003. Fragaria xbifera Duch.: Origin and taxonomy. Bot. Jahrb. Syst. 125: 53-72.
132. Sugimoto, T., Tamaki, K., Matsumoto, J., Yamamoto, Y., Shiwaku, K., and Watanabe, K. 2005. Detection of RAPD markers linked to the everbearing gene in Japanese cultivated strawberry. Plant Breeding 124: 498-501.
133. Trainotti, L., Pavanello, A., and Casadoro, G. 2005. Different ethylene receptors show an increased expression during the ripening of strawberries: Does such an increment imply a role for ethylene in the ripening of these non-climacteric fruits? J. Exp. Bot. 56: 2037-2046.
134. Trainotti, L., Spolaore, S., Pavanello, A., Baldan, B., and Casadoro, G. 1999. A novel E-type endo-beta-1,4-glucanase with a putative cellulose-binding domain is highly expressed in ripening strawberry fruits. Plant Mol. Biol. 40: 323-332.
135. Urwin, P. E., Troth, K. M., Zubko, E. I., and Atkinson, H. J. 2001. Effective transgenic resistance to Globodera pallida in potato field trials. Molec. Breeding 8: 95-101.
136. van de Weg, W. E. 1997a. A gene-for-gene model to explain interactions between cultivars of strawberry and races of Phytophthora fragariae var fragariae. Theo. App. Genet. 94: 445-451.
137. van de Weg, W. E. 1997b. Resistance to Phytophthora fragariae var. fragariae in strawberry: The Rpf2 gene. Theo. App. Genet. 94: 1092-1096.
138. Vellicce, G. R., Ricci, J. C. D., Hernandez, L., and Castagnaro, A. P. 2006. Enhanced resistance to Botrytis cinerea mediated by the transgenic expression of the chitinase gene ch5B in strawberry. Transgenic Res. 15: 57-68.
139. Wein, M., Lavid, N., Lunkenbein, S., Lewinsohn, E., Schwab, W., and Kaldenhoff, R. 2002. Isolation, cloning and expression of a multifunctional O-methyltransferase capable of forming 2,5-dimethyl-4-methoxy-3(2H)-furanone, one of the key aroma compounds in strawberry fruits. Plant J. 31: 755-765.
140. Wendel, J. F., Schnabel, A., and Seelanan, T. 1995. Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium). Proc. Nat. Acad. Sci. USA 92: 280-284.
141. Wilkinson, J. Q., Lanahan, M. B., Conner, T. W., and Klee, H. J. 1995. Identification of messenger RNAs with enhanced expression in ripening strawberry fruit using polymerase chain reaction differential display. Plant Mol. Biol. 27: 1097-1108.
142. Williamson, S. C., Yu, H., and Davis, T. M. 1995. Shikimate dehydrogenase allozymes-inheritance and close linkage to fruit color in the diploid strawberry. J. Hered. 86: 74-76.
143. Woolley, L. C., James, D. J., and Manning, K. 2001. Purification and properties of an endo-beta-1,4-glucanase from strawberry and down-regulation of the corresponding gene, cel1. Planta 214: 11-21.
144. Yu, H. R., and Davis, T. M. 1995. Genetic-linkage between runnering and phosphoglucoisomerase allozymes, and systematic distortion of monogenic segregation ratios in diploid strawberry. J. Am. Soc. Hort. Sci. 120: 687-690.
145. Zhang, J. Z., Creelman, R. A., and Zhu, J. K. 2004. From laboratory to field. Using information from Arabidopsis to engineer salt, cold, and drought tolerance in crops. Plant Physiol. 135: 615-621.