-
1
-
-
34547227547
-
The obesity epidemic in the United States gender, age, socioeconomic, racial/ethnic, and geographic characteristics: a systematic review and meta-regression analysis
-
COI: 1:CAS:528:DC%2BD1cXhtFSntb3L
-
Wang, Y. & Beydoun, M. A. The obesity epidemic in the United States gender, age, socioeconomic, racial/ethnic, and geographic characteristics: a systematic review and meta-regression analysis. Epidemiol. Rev. 29, 6–28 (2007).
-
(2007)
Epidemiol. Rev.
, vol.29
, pp. 6-28
-
-
Wang, Y.1
Beydoun, M.A.2
-
2
-
-
84865055757
-
Analysis of the gut microbiota in the old order amish and its relation to the metabolic syndrome
-
COI: 1:CAS:528:DC%2BC38Xht1ejtb7F
-
Zupancic, M. L. et al. Analysis of the gut microbiota in the old order amish and its relation to the metabolic syndrome. PLoS ONE 7, e43052 (2012).
-
(2012)
PLoS ONE
, vol.7
-
-
Zupancic, M.L.1
-
3
-
-
34247851021
-
The epidemiology of obesity
-
Ogden, C. L., Yanovski, S. Z., Carroll, M. D. & Flegal, K. M. The epidemiology of obesity. Gastroenterology 132, 2087–2102 (2007).
-
(2007)
Gastroenterology
, vol.132
, pp. 2087-2102
-
-
Ogden, C.L.1
Yanovski, S.Z.2
Carroll, M.D.3
Flegal, K.M.4
-
4
-
-
58749112734
-
A core gut microbiome in obese and lean twins
-
Turnbaugh, P. J. et al. A core gut microbiome in obese and lean twins. Nature 457, 480–484 (2008).
-
(2008)
Nature
, vol.457
, pp. 480-484
-
-
Turnbaugh, P.J.1
-
5
-
-
84920971125
-
Molecular ecological tools to decipher the role of our microbial mass in obesity
-
COI: 1:CAS:528:DC%2BC1cXltlyisLk%3D
-
Hermes, G. D. A., Zoetendal, E. G. & Smidt, H. Molecular ecological tools to decipher the role of our microbial mass in obesity. Benef. Microbes 6, 61–81 (2015).
-
(2015)
Benef. Microbes
, vol.6
, pp. 61-81
-
-
Hermes, G.D.A.1
Zoetendal, E.G.2
Smidt, H.3
-
6
-
-
84883478660
-
Gut microbiota from twins discordant for obesity modulate metabolism in mice
-
Ridaura, V. K. et al. Gut microbiota from twins discordant for obesity modulate metabolism in mice. Science 341, 1241214 (2013).
-
(2013)
Science
, vol.341
, pp. 1241214
-
-
Ridaura, V.K.1
-
7
-
-
77950669604
-
The effect of diet on the human gutmicrobiome: a metagenomic analysis in humanized gnotobiotic mice
-
Turnbaugh, P. J. et al. The effect of diet on the human gutmicrobiome: a metagenomic analysis in humanized gnotobiotic mice. Sci. Transl. Med. 1, 6ra14–6ra14 (2009).
-
(2009)
Sci. Transl. Med.
, vol.1
, pp. 6ra14
-
-
Turnbaugh, P.J.1
-
8
-
-
33845874101
-
An obesity-associated gut microbiome with increased capacity for energy harvest
-
Turnbaugh, P. J. et al. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444, 1027–1131 (2006).
-
(2006)
Nature
, vol.444
, pp. 1027-1131
-
-
Turnbaugh, P.J.1
-
9
-
-
85018198613
-
Role of the gut microbiome in the pathogenesis of obesity and obesity-related metabolic dysfunction
-
COI: 1:CAS:528:DC%2BC2sXms1CntLc%3D
-
Bouter, K. E., van Raalte, D. H., Groen, A. K. & Nieuwdorp, M. Role of the gut microbiome in the pathogenesis of obesity and obesity-related metabolic dysfunction. Gastroenterology 152, 1671–1678 (2017).
-
(2017)
Gastroenterology
, vol.152
, pp. 1671-1678
-
-
Bouter, K.E.1
van Raalte, D.H.2
Groen, A.K.3
Nieuwdorp, M.4
-
10
-
-
84897138661
-
A taxonomic signature of obesity in the microbiome? Getting to the guts of the matter
-
Finucane, M. M., Sharpton, T. J., Laurent, T. J. & Pollard, K. S. A taxonomic signature of obesity in the microbiome? Getting to the guts of the matter. PLoS ONE 9, e84689 (2014).
-
(2014)
PLoS ONE
, vol.9
-
-
Finucane, M.M.1
Sharpton, T.J.2
Laurent, T.J.3
Pollard, K.S.4
-
11
-
-
84883110880
-
Richness of human gut microbiome correlates with metabolic markers
-
Le Chatelier, E. et al. Richness of human gut microbiome correlates with metabolic markers. Nature 500, 541–546 (2013).
-
(2013)
Nature
, vol.500
, pp. 541-546
-
-
Le Chatelier, E.1
-
12
-
-
84986596815
-
Looking for a signal in the noise: revisiting obesity and the microbiome
-
Sze, M. A. & Schloss, P. D. Looking for a signal in the noise: revisiting obesity and the microbiome. mBio 7, e01018–16 (2016).
-
(2016)
mBio
, vol.7
, pp. e01018-e1016
-
-
Sze, M.A.1
Schloss, P.D.2
-
13
-
-
85049133378
-
A taxonomic signature of obesity in a large study of American adults
-
Peters, B. A. et al. A taxonomic signature of obesity in a large study of American adults. Sci. Rep. 8, 9749 (2018).
-
(2018)
Sci. Rep.
, vol.8
-
-
Peters, B.A.1
-
14
-
-
60549086580
-
Human gut microbiota in obesity and after gastric bypass
-
COI: 1:CAS:528:DC%2BD1MXit12jtL4%3D
-
Zhang, H. et al. Human gut microbiota in obesity and after gastric bypass. PNAS 106, 2365–2370 (2009).
-
(2009)
PNAS
, vol.106
, pp. 2365-2370
-
-
Zhang, H.1
-
15
-
-
85014745310
-
Fecal Bacterial Communities in treated HIV infected individuals on two antiretroviral regimens
-
Pinto-Cardoso, S. et al. Fecal Bacterial Communities in treated HIV infected individuals on two antiretroviral regimens. Sci. Rep. 7, 43741–43741 (2017).
-
(2017)
Sci. Rep.
, vol.7
, pp. 43741
-
-
Pinto-Cardoso, S.1
-
16
-
-
74249119678
-
Obesity and the human microbiome
-
Ley, R. E. Obesity and the human microbiome. Curr. Opin. Gastroenterol. 26, 5–11 (2010).
-
(2010)
Curr. Opin. Gastroenterol.
, vol.26
, pp. 5-11
-
-
Ley, R.E.1
-
17
-
-
85021240855
-
Geography, Ethnicity or subsistence-specific variations in human microbiome composition and diversity
-
Gupta, V. K., Paul, S. & Dutta, C. Geography, Ethnicity or subsistence-specific variations in human microbiome composition and diversity. Front. Microbiol. 8, 1162 (2017).
-
(2017)
Front. Microbiol.
, vol.8
, pp. 1162
-
-
Gupta, V.K.1
Paul, S.2
Dutta, C.3
-
18
-
-
85058899582
-
Gut microbiota diversity across ethnicities in the United States
-
Brooks, A. W., Priya, S., Blekhman, R. & Bordenstein, S. R. Gut microbiota diversity across ethnicities in the United States. PLoS Biol. 16(12), e2006842, 10.1101/342915 (2018).
-
(2018)
PLoS Biol.
, vol.16
, Issue.12
-
-
Brooks, A.W.1
Priya, S.2
Blekhman, R.3
Bordenstein, S.R.4
-
19
-
-
84862141704
-
Human gut microbiome viewed across age and geography
-
Yatsunenko, T. et al. Human gut microbiome viewed across age and geography. Nature 10.1038/nature11053 (2012).
-
(2012)
Nature
, vol.486
, Issue.7402
, pp. 222-227
-
-
Yatsunenko, T.1
Rey, F.E.2
Manary, M.J.3
Trehan, I.4
Dominguez-Bello, M.G.5
Contreras, M.6
Magris, M.7
Hidalgo, G.8
Baldassano, R.N.9
Anokhin, A.P.10
Heath, A.C.11
Warner, B.12
Reeder, J.13
Kuczynski, J.14
Caporaso, J.G.15
Lozupone, C.A.16
Lauber, C.17
Clemente, J.C.18
Knights, D.19
Knight, R.20
Gordon, J.I.21
more..
-
20
-
-
85049197113
-
American Gut: an Open Platform for Citizen-Science Microbiome Research
-
McDonald, D. et al. American Gut: an Open Platform for Citizen-Science Microbiome Research. mSystems 3(3), e00031-18, 10.1101/277970 (2018).
-
(2018)
mSystems
, vol.3
, Issue.3
-
-
McDonald, D.1
-
21
-
-
85052298458
-
Gut microbiota in adolescents and the association with fatty liver: the EPOCH study
-
Stanislawski, M. A. et al. Gut microbiota in adolescents and the association with fatty liver: the EPOCH study. Pediatric Res. 84, 219–227 (2018).
-
(2018)
Pediatric Research
, vol.84
, Issue.2
, pp. 219-227
-
-
Stanislawski, M.A.1
Lozupone, C.A.2
Wagner, B.D.3
Eggesbø, M.4
Sontag, M.K.5
Nusbacher, N.M.6
Martinez, M.7
Dabelea, D.8
-
22
-
-
84883864245
-
Meta-analyses of studies of the human microbiota
-
Lozupone, C. et al. Meta-analyses of studies of the human microbiota. Genome Res. 10.1101/gr.151803.112 (2013).
-
(2013)
Genome Research
, vol.23
, Issue.10
, pp. 1704-1714
-
-
Lozupone, C.A.1
Stombaugh, J.2
Gonzalez, A.3
Ackermann, G.4
Wendel, D.5
Vazquez-Baeza, Y.6
Jansson, J.K.7
Gordon, J.I.8
Knight, R.9
-
23
-
-
78751575501
-
UniFrac: an effective distance metric for microbial community comparison
-
Lozupone, C., Lladser, M. E., Knights, D., Stombaugh, J. & Knight, R. UniFrac: an effective distance metric for microbial community comparison. ISME J. 5, 169 (2011).
-
(2011)
ISME J.
, vol.5
, pp. 169
-
-
Lozupone, C.1
Lladser, M.E.2
Knights, D.3
Stombaugh, J.4
Knight, R.5
-
24
-
-
77957075815
-
Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa
-
Filippo, C. D. et al. Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa. PNAS 107, 14691–14696 (2010).
-
(2010)
PNAS
, vol.107
, pp. 14691-14696
-
-
Filippo, C.D.1
-
25
-
-
0032819488
-
Resiliency factors protecting against teenage alcohol use and smoking: influences of religion, religious involvement and values, and ethnicity in the Missouri Adolescent Female Twin Study
-
COI: 1:STN:280:DyaK1MvgvVKhtA%3D%3D
-
Heath, A. et al. Resiliency factors protecting against teenage alcohol use and smoking: influences of religion, religious involvement and values, and ethnicity in the Missouri Adolescent Female Twin Study. Twin Res. 2, 145–155 (1999).
-
(1999)
Twin Res.
, vol.2
, pp. 145-155
-
-
Heath, A.1
-
26
-
-
84978081339
-
Human gut microbes impact host serum metabolome and insulin sensitivity
-
COI: 1:CAS:528:DC%2BC28Xht1yqsLnP
-
Pedersen, H. K. et al. Human gut microbes impact host serum metabolome and insulin sensitivity. Nature 535, 376–381 (2016).
-
(2016)
Nature
, vol.535
, pp. 376-381
-
-
Pedersen, H.K.1
-
27
-
-
84949491459
-
Dietary fiber-induced improvement in glucose metabolism is associated with increased abundance of prevotella
-
COI: 1:CAS:528:DC%2BC2MXhsl2mtr%2FM
-
Kovatcheva-Datchary, P. et al. Dietary fiber-induced improvement in glucose metabolism is associated with increased abundance of prevotella. Cell Metab. 22, 971–982 (2015).
-
(2015)
Cell Metab.
, vol.22
, pp. 971-982
-
-
Kovatcheva-Datchary, P.1
-
28
-
-
85045051458
-
Smoking and the intestinal microbiome
-
COI: 1:CAS:528:DC%2BC1cXntlemtLg%3D
-
Savin, Z., Kivity, S., Yonath, H. & Yehuda, S. Smoking and the intestinal microbiome. Arch. Microbiol. 200, 677–684 (2018).
-
(2018)
Arch. Microbiol.
, vol.200
, pp. 677-684
-
-
Savin, Z.1
Kivity, S.2
Yonath, H.3
Yehuda, S.4
-
29
-
-
84929483934
-
Relationship between Smoking and Obesity: a Cross-Sectional Study of 499,504 Middle-Aged Adults in the UK General Population
-
&
-
Dare, S., Mackay, D. F. & Pell, J. P. Relationship between Smoking and Obesity: a Cross-Sectional Study of 499,504 Middle-Aged Adults in the UK General Population. PLoS ONE 10(4), e0123579 (2015).
-
(2015)
PLoS ONE
, vol.10
, Issue.4
-
-
Dare, S.1
Mackay, D.F.2
Pell, J.P.3
-
30
-
-
84910096224
-
Human genetics shape the gut microbiome
-
COI: 1:CAS:528:DC%2BC2cXhvV2msrnJ
-
Goodrich, J. K. et al. Human genetics shape the gut microbiome. Cell 159, 789–799 (2014).
-
(2014)
Cell
, vol.159
, pp. 789-799
-
-
Goodrich, J.K.1
-
31
-
-
84862276328
-
Structure, function and diversity of the healthy human microbiome
-
Human Microbiome Project Consortium. Structure, function and diversity of the healthy human microbiome. Nature 486, 207–214 (2012).
-
(2012)
Nature
, vol.486
, pp. 207-214
-
-
-
32
-
-
84886019355
-
Deep sequencing identifies ethnicity-specific bacterial signatures in the oral microbiome
-
COI: 1:CAS:528:DC%2BC3sXhs12qu7nI
-
Mason, M. R., Nagaraja, H. N., Camerlengo, T., Joshi, V. & Kumar, P. S. Deep sequencing identifies ethnicity-specific bacterial signatures in the oral microbiome. PLoS ONE 8, e77287 (2013).
-
(2013)
PLoS ONE
, vol.8
-
-
Mason, M.R.1
Nagaraja, H.N.2
Camerlengo, T.3
Joshi, V.4
Kumar, P.S.5
-
33
-
-
84908078004
-
Differences in vaginal microbiome in African American women versus women of European ancestry
-
COI: 1:CAS:528:DC%2BC2cXitVelurfM
-
Fettweis, J. M. et al. Differences in vaginal microbiome in African American women versus women of European ancestry. Microbiology 160, 2272–2282 (2014).
-
(2014)
Microbiology
, vol.160
, pp. 2272-2282
-
-
Fettweis, J.M.1
-
34
-
-
84899019032
-
Selected vaginal bacteria and risk of preterm birth: an ecological perspective
-
Wen, A. et al. Selected vaginal bacteria and risk of preterm birth: an ecological perspective. J. Infect. Dis. 209, 1087–1094 (2014).
-
(2014)
J. Infect. Dis.
, vol.209
, pp. 1087-1094
-
-
Wen, A.1
-
35
-
-
72449190581
-
Associations between dietary habits and body mass index with gut microbiota composition and fecal water genotoxicity: an observational study in African American and Caucasian American volunteers
-
Mai, V., McCrary, Q. M., Sinha, R. & Glei, M. Associations between dietary habits and body mass index with gut microbiota composition and fecal water genotoxicity: an observational study in African American and Caucasian American volunteers. Nutr. J. 8, 49 (2009).
-
(2009)
Nutr. J.
, vol.8
-
-
Mai, V.1
McCrary, Q.M.2
Sinha, R.3
Glei, M.4
-
36
-
-
84929094853
-
Fat, fibre and cancer risk in African Americans and rural Africans
-
O’Keefe, S. J. D. et al. Fat, fibre and cancer risk in African Americans and rural Africans. Nat. Commun. 6, 6342 (2015).
-
(2015)
Nat. Commun.
, vol.6
, pp. 6342
-
-
O’Keefe, S.J.D.1
-
37
-
-
85043351358
-
Environment dominates over host genetics in shaping human gut microbiota
-
COI: 1:CAS:528:DC%2BC1cXjsFaitLg%3D
-
Rothschild, D. et al. Environment dominates over host genetics in shaping human gut microbiota. Nature 555, 210–215 (2018).
-
(2018)
Nature
, vol.555
, pp. 210-215
-
-
Rothschild, D.1
-
38
-
-
84920797739
-
The genetic ancestry of African Americans, Latinos, and European Americans across the United States
-
COI: 1:CAS:528:DC%2BC2MXmt12itQ%3D%3D
-
Bryc, K., Durand, E. Y., Macpherson, J. M., Reich, D. & Mountain, J. L. The genetic ancestry of African Americans, Latinos, and European Americans across the United States. Am. J. Hum. Genet. 96, 37–53 (2015).
-
(2015)
Am. J. Hum. Genet.
, vol.96
, pp. 37-53
-
-
Bryc, K.1
Durand, E.Y.2
Macpherson, J.M.3
Reich, D.4
Mountain, J.L.5
-
39
-
-
77956109573
-
Genetic make up and structure of Colombian populations by means of uniparental and biparental DNA markers
-
Rojas, W. et al. Genetic make up and structure of Colombian populations by means of uniparental and biparental DNA markers. Am. J. Phys. Anthropol. 143, 13–20 (2010).
-
(2010)
Am. J. Phys. Anthropol.
, vol.143
, pp. 13-20
-
-
Rojas, W.1
-
40
-
-
85044620123
-
Pre-treatment microbial Prevotella-to-Bacteroides ratio, determines body fat loss success during a 6-month randomized controlled diet intervention
-
COI: 1:STN:280:DC%2BC1cblvVKrsg%3D%3D
-
Hjorth, M. F. et al. Pre-treatment microbial Prevotella-to-Bacteroides ratio, determines body fat loss success during a 6-month randomized controlled diet intervention. Int. J. Obes. 42, 580–583 (2018).
-
(2018)
Int. J. Obes.
, vol.42
, pp. 580-583
-
-
Hjorth, M.F.1
-
41
-
-
84942114309
-
Effect of dietary carbohydrate restriction on an obesity-related prevotella-dominated human fecal microbiota metagenomics
-
Durban, A., Abell, J. J., Latorre, A. & Moya, A. Effect of dietary carbohydrate restriction on an obesity-related prevotella-dominated human fecal microbiota metagenomics. Metagenomics 2, 1–4, 10.4303/mg/235722 (2013).
-
(2013)
Metagenomics
, vol.2
, pp. 1-4
-
-
Durban, A.1
Abell, J.J.2
Latorre, A.3
Moya, A.4
-
42
-
-
85068229887
-
The complex comprises four distinct clades that are underrepresented in Westernised populations
-
Tett, A. et al. The complex comprises four distinct clades that are underrepresented in Westernised populations. bioRxiv. 10.1101/600593 (2019).
-
(2019)
bioRxiv
-
-
Tett, A.1
-
43
-
-
80053618114
-
Linking long-term dietary patterns with gut microbial enterotypes
-
COI: 1:CAS:528:DC%2BC3MXht1Gms77K
-
Wu, G. D. et al. Linking long-term dietary patterns with gut microbial enterotypes. Science 334, 105–108 (2011).
-
(2011)
Science
, vol.334
, pp. 105-108
-
-
Wu, G.D.1
-
44
-
-
84887323708
-
Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis
-
Scher, J. U. et al. Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis. eLife 2, e01202 (2013).
-
(2013)
eLife
, vol.2
-
-
Scher, J.U.1
-
45
-
-
85048287255
-
Meta-analysis of human genome-microbiome association studies: the MiBioGen consortium initiative
-
Wang, J. et al. Meta-analysis of human genome-microbiome association studies: the MiBioGen consortium initiative. Microbiome 6, 101 (2018).
-
(2018)
Microbiome
, vol.6
-
-
Wang, J.1
-
46
-
-
84940392207
-
The role of the gut microbiota in metabolic health
-
Janssen, A. W. F. & Kersten, S. The role of the gut microbiota in metabolic health. FASEB J. 10.1096/fj.14-269514 (2015).
-
(2015)
The FASEB Journal
, vol.29
, Issue.8
, pp. 3111-3123
-
-
Janssen, A.W.F.1
Kersten, S.2
-
47
-
-
84962130461
-
Characterization of the gut microbiome in epidemiologic studies: the multiethnic cohort experience
-
Fu, B. C. et al. Characterization of the gut microbiome in epidemiologic studies: the multiethnic cohort experience. Ann. Epidemiol. 26, 373–379 (2016).
-
(2016)
Ann. Epidemiol.
, vol.26
, pp. 373-379
-
-
Fu, B.C.1
-
48
-
-
79953732420
-
Mice: Multivariate imputation by chained equations in R
-
van Buuren, S. & Groothuis-Oudshoorn, K. Mice: Multivariate imputation by chained equations in R. J. Stat. Softw. 45(3), 1–67 https://www.jstatsoft.org/v45/i03/ (2018).
-
(2018)
J. Stat. Softw.
, vol.45
, Issue.3
, pp. 1-67
-
-
van Buuren, S.1
Groothuis-Oudshoorn, K.2
-
49
-
-
85044039990
-
-
R Foundation for Statistical Computing
-
R Core Team. R: The R Project for Statistical Computing. (R Foundation for Statistical Computing, 2018) https://www.r-project.org/.
-
(2018)
R: The R Project for Statistical Computing
-
-
-
50
-
-
85068207187
-
-
vegan: Community Ecology Package. R package version 2.5-2
-
Oksanen, J. et al. vegan: Community Ecology Package. R package version 2.5-2. https://CRAN.R-project.org/package=vegan (2018).
-
(2018)
-
-
Oksanen, J.1
-
51
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
COI: 1:CAS:528:DC%2BC3cXksFalurg%3D
-
Caporaso, J. G. et al. QIIME allows analysis of high-throughput community sequencing data. Nat. Methods 7, 335–336 (2010).
-
(2010)
Nat. Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
|