-
1
-
-
45849110321
-
Diversity of lactic acid bacteria and yeasts in Airag and Tarag, traditional fermented milk products of Mongolia
-
Watanabe K, Fujimoto J, Sasamoto M, Dugersuren J, Tumursuh T et al. Diversity of lactic acid bacteria and yeasts in Airag and Tarag, traditional fermented milk products of Mongolia. World J Microbiol Biotechnol 2008;24:1313-1325.
-
(2008)
World J Microbiol Biotechnol
, vol.24
, pp. 1313-1325
-
-
Watanabe, K.1
Fujimoto, J.2
Sasamoto, M.3
Dugersuren, J.4
Tumursuh, T.5
-
2
-
-
84927784046
-
The genus Lactobacillus
-
Holzapfel WH and Wood BJB (editors), West Sussex, UK:John Wiley & Sons Ltd
-
Pot B, Felis GE, De Bruyne K, Takalidou E, Papadimitriou K et al. The genus Lactobacillus. In: Holzapfel WH and Wood BJB (editors). Lactic Acid Bacteria: Biodiversity and Taxonomy. West Sussex, UK:John Wiley & Sons Ltd; 2014. pp. 249-353.
-
(2014)
Lactic Acid Bacteria: Biodiversity and Taxonomy
, pp. 249-353
-
-
Pot, B.1
Felis, G.E.2
De Bruyne, K.3
Takalidou, E.4
Papadimitriou, K.5
-
3
-
-
84964350689
-
Review: Diversity of microorganisms in global fermented foods and beverages
-
Tamang JP, Watanabe K, Holzapfel WH. Review: diversity of microorganisms in global fermented foods and beverages. Front Microbiol 2016;7:377-404.
-
(2016)
Front Microbiol
, vol.7
, pp. 377-404
-
-
Tamang, J.P.1
Watanabe, K.2
Holzapfel, W.H.3
-
4
-
-
85053820394
-
Thai fermented foods as a versatile source of bioactive microorganisms-a comprehensive review
-
Sivamaruthi BS, Kesika P, Chaiyasut C. Thai fermented foods as a versatile source of bioactive microorganisms-a comprehensive review. Sci Pharm 2018;86:37.
-
(2018)
Sci Pharm
, vol.86
, pp. 37
-
-
Sivamaruthi, B.S.1
Kesika, P.2
Chaiyasut, C.3
-
5
-
-
33745438534
-
Isolation and characterization of lactic acid bacteria from suan-tsai (fermented mustard), a traditional fermented food in Taiwan
-
Chen YS, Yanagida F, Hsu JS. Isolation and characterization of lactic acid bacteria from suan-tsai (fermented mustard), a traditional fermented food in Taiwan. J Appl Microbiol 2006;101:125-130.
-
(2006)
J Appl Microbiol
, vol.101
, pp. 125-130
-
-
Chen, Y.S.1
Yanagida, F.2
Hsu, J.S.3
-
6
-
-
70349764689
-
Diversity of lactic acid bacteria in suan-tsai and fu-tsai, traditional fermented mustard products of Taiwan
-
Chao SH, Wu RJ, Watanabe K, Tsai YC. Diversity of lactic acid bacteria in suan-tsai and fu-tsai, traditional fermented mustard products of Taiwan. Int J Food Microbiol 2009;135:203-210.
-
(2009)
Int J Food Microbiol
, vol.135
, pp. 203-210
-
-
Chao, S.H.1
Wu, R.J.2
Watanabe, K.3
Tsai, Y.C.4
-
7
-
-
25144459549
-
Lactobacillus harbinensis sp. nov., consisted of strains isolated from traditional fermented vegetables ‘Suan cai’ in Harbin, Northeastern China and Lactobacillus perolens DSM 12745
-
Miyamoto M, Seto Y, Hao DH, Teshima T, Sun YB et al. Lactobacillus harbinensis sp. nov., consisted of strains isolated from traditional fermented vegetables ‘Suan cai’ in Harbin, Northeastern China and Lactobacillus perolens DSM 12745. Syst Appl Microbiol 2005;28:688-694.
-
(2005)
Syst Appl Microbiol
, vol.28
, pp. 688-694
-
-
Miyamoto, M.1
Seto, Y.2
Hao, D.H.3
Teshima, T.4
Sun, Y.B.5
-
8
-
-
84857989699
-
Lactobacillus futsaii sp. nov., isolated from fu-tsai and suan-tsai, traditional Taiwanese fermented mustard products
-
Chao SH, Kudo Y, Tsai YC, Watanabe K. Lactobacillus futsaii sp. nov., isolated from fu-tsai and suan-tsai, traditional Taiwanese fermented mustard products. Int J Syst Evol Microbiol 2012;62:489-494.
-
(2012)
Int J Syst Evol Microbiol
, vol.62
, pp. 489-494
-
-
Chao, S.H.1
Kudo, Y.2
Tsai, Y.C.3
Watanabe, K.4
-
9
-
-
85042022947
-
Polyphasic characterization of a novel species in the Lactobacillus casei group from cow manure of Taiwan: Description of L. chiayiensis sp. nov
-
Huang CH, Liou JS, Lee AY, Tseng M, Miyashita M et al. Polyphasic characterization of a novel species in the Lactobacillus casei group from cow manure of Taiwan: Description of L. chiayiensis sp. nov. Syst Appl Microbiol 2018;41:270-278.
-
(2018)
Syst Appl Microbiol
, vol.41
, pp. 270-278
-
-
Huang, C.H.1
Liou, J.S.2
Lee, A.Y.3
Tseng, M.4
Miyashita, M.5
-
10
-
-
85051164092
-
Lactobacillus bambusae sp. nov., isolated from traditional fermented ma bamboo shoots in Taiwan
-
Guu JR, Wang LT, Hamada M, Wang C, Lin RW et al. Lactobacillus bambusae sp. nov., isolated from traditional fermented ma bamboo shoots in Taiwan. Int J Syst Evol Microbiol 2018;68:2424-2430.
-
(2018)
Int J Syst Evol Microbiol
, vol.68
, pp. 2424-2430
-
-
Guu, J.R.1
Wang, L.T.2
Hamada, M.3
Wang, C.4
Lin, R.W.5
-
11
-
-
37549058842
-
Identification of lactobacilli by pheS and rpoA gene sequence analyses
-
Naser SM, Dawyndt P, Hoste B, Gevers D, Vandemeulebroecke K et al. Identification of lactobacilli by pheS and rpoA gene sequence analyses. Int J Syst Evol Microbiol 2007;57:2777-2789.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 2777-2789
-
-
Naser, S.M.1
Dawyndt, P.2
Hoste, B.3
Gevers, D.4
Vandemeulebroecke, K.5
-
12
-
-
84863230041
-
Introducing EzTaxon-e: A prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species
-
Kim OS, Cho YJ, Lee K, Yoon SH, Kim M et al. Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int J Syst Evol Microbiol 2012;62:716-721.
-
(2012)
Int J Syst Evol Microbiol
, vol.62
, pp. 716-721
-
-
Kim, O.S.1
Cho, Y.J.2
Lee, K.3
Yoon, S.H.4
Kim, M.5
-
13
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 1997;25:4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
14
-
-
85022158148
-
MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets
-
Kumar S, Stecher G, Tamura K. MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol 2016;33:1870-1874.
-
(2016)
Mol Biol Evol
, vol.33
, pp. 1870-1874
-
-
Kumar, S.1
Stecher, G.2
Tamura, K.3
-
15
-
-
33244461129
-
Maximum likelihood Jukes-Cantor triplets: Analytic solutions
-
Chor B, Hendy MD, Snir S. Maximum likelihood Jukes-Cantor triplets:analytic solutions. Mol Biol Evol 2006;23:626-632.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 626-632
-
-
Chor, B.1
Hendy, M.D.2
Snir, S.3
-
16
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 1985;39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
17
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987;4:406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
18
-
-
0026660413
-
A simple method for estimating and testing minimum-evolution trees
-
Rzhetsky A, Nei M. A simple method for estimating and testing minimum-evolution trees. Mol Biol Evol 1992;9:945-967.
-
(1992)
Mol Biol Evol
, vol.9
, pp. 945-967
-
-
Rzhetsky, A.1
Nei, M.2
-
19
-
-
84897944635
-
Recommended minimal standards for description of new taxa of the genera Bifidobacterium, Lactobacillus and related genera
-
Mattarelli P, Holzapfel W, Franz CM, Endo A, Felis GE et al. Recommended minimal standards for description of new taxa of the genera Bifidobacterium, Lactobacillus and related genera. Int J Syst Evol Microbiol 2014;64:1434-1451.
-
(2014)
Int J Syst Evol Microbiol
, vol.64
, pp. 1434-1451
-
-
Mattarelli, P.1
Holzapfel, W.2
Franz, C.M.3
Endo, A.4
Felis, G.E.5
-
21
-
-
58149186488
-
The national center for biotechnology information’s protein clusters database
-
Klimke W, Agarwala R, Badretdin A, Chetvernin S, Ciufo S et al. The national center for biotechnology information’s protein clusters database. Nucleic Acids Res 2009;37:D216-D223.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. D216-D223
-
-
Klimke, W.1
Agarwala, R.2
Badretdin, A.3
Chetvernin, S.4
Ciufo, S.5
-
22
-
-
67649159262
-
EDGAR: A software framework for the comparative analysis of prokaryotic genomes
-
Blom J, Albaum SP, Doppmeier D, Pühler A, Vorhölter FJ et al. EDGAR: a software framework for the comparative analysis of prokaryotic genomes. BMC Bioinformatics 2009;10:154.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 154
-
-
Blom, J.1
Albaum, S.P.2
Doppmeier, D.3
Pühler, A.4
Vorhölter, F.J.5
-
23
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar RC. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 2004;32:1792-1797.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
24
-
-
77949718257
-
FastTree 2-approximately maximum- likelihood trees for large alignments
-
Price MN, Dehal PS, Arkin AP. FastTree 2-approximately maximum- likelihood trees for large alignments. PLoS One 2010;5:e9490.
-
(2010)
PLoS One
, vol.5
, pp. 490
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
25
-
-
84960373245
-
OrthoANI: An improved algorithm and software for calculating average nucleotide identity
-
Lee I, Ouk Kim Y, Park SC, Chun J. OrthoANI: an improved algorithm and software for calculating average nucleotide identity. Int J Syst Evol Microbiol 2016;66:1100-1103.
-
(2016)
Int J Syst Evol Microbiol
, vol.66
, pp. 1100-1103
-
-
Lee, I.1
Ouk Kim, Y.2
Park, S.C.3
Chun, J.4
-
26
-
-
84874011652
-
Genome sequence-based species delimitation with confidence intervals and improved distance functions
-
Meier-Kolthoff JP, Auch AF, Klenk HP, Göker M. Genome sequence-based species delimitation with confidence intervals and improved distance functions. BMC Bioinformatics 2013;14:60.
-
(2013)
BMC Bioinformatics
, vol.14
, pp. 60
-
-
Meier-Kolthoff, J.P.1
Auch, A.F.2
Klenk, H.P.3
Göker, M.4
-
27
-
-
14044262978
-
Genomic insights that advance the species definition for prokaryotes
-
Konstantinidis KT, Tiedje JM. Genomic insights that advance the species definition for prokaryotes. Proc Natl Acad Sci USA 2005;102:2567-2572.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 2567-2572
-
-
Konstantinidis, K.T.1
Tiedje, J.M.2
-
28
-
-
24944587193
-
Towards a genome-based taxonomy for prokaryotes
-
Konstantinidis KT, Tiedje JM. Towards a genome-based taxonomy for prokaryotes. J Bacteriol 2005;187:6258-6264.
-
(2005)
J Bacteriol
, vol.187
, pp. 6258-6264
-
-
Konstantinidis, K.T.1
Tiedje, J.M.2
-
29
-
-
0021077093
-
A rapid analysis for chemical grouping of aerobic actinomycetes
-
Hasegawa T, Takizawa M, Tanida S. A rapid analysis for chemical grouping of aerobic actinomycetes. J Gen Appl Microbiol 1983;29:319-322.
-
(1983)
J Gen Appl Microbiol
, vol.29
, pp. 319-322
-
-
Hasegawa, T.1
Takizawa, M.2
Tanida, S.3
-
30
-
-
84865698247
-
Luteimicrobium album sp. nov., a novel actinobacterium isolated from a lichen collected in Japan, and emended description of the genus Luteimicrobium
-
Hamada M, Yamamura H, Komukai C, Tamura T, Suzuki K et al. Luteimicrobium album sp. nov., a novel actinobacterium isolated from a lichen collected in Japan, and emended description of the genus Luteimicrobium. J Antibiot 2012;65:427-431.
-
(2012)
J Antibiot
, vol.65
, pp. 427-431
-
-
Hamada, M.1
Yamamura, H.2
Komukai, C.3
Tamura, T.4
Suzuki, K.5
-
31
-
-
34547634358
-
Reliable and sensitive analysis of amino acids in the peptidoglycan of actinomycetes using the advanced Marfey’s method
-
Nozawa Y, Sakai N, Arai K, Kawasaki Y, Harada K. Reliable and sensitive analysis of amino acids in the peptidoglycan of actinomycetes using the advanced Marfey’s method. J Microbiol Methods 2007;70:306-311.
-
(2007)
J Microbiol Methods
, vol.70
, pp. 306-311
-
-
Nozawa, Y.1
Sakai, N.2
Arai, K.3
Kawasaki, Y.4
Harada, K.5
-
32
-
-
4344606186
-
Chitinibacter tainanensis gen. nov., sp. nov., a chitin-degrading aerobe from soil in Taiwan
-
Chern LL, Stackebrandt E, Lee SF, Lee FL, Chen JK et al. Chitinibacter tainanensis gen. nov., sp. nov., a chitin-degrading aerobe from soil in Taiwan. Int J Syst Evol Microbiol 2004;54:1387-1391.
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 1387-1391
-
-
Chern, L.L.1
Stackebrandt, E.2
Lee, S.F.3
Lee, F.L.4
Chen, J.K.5
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