Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2's q2-feature-classifier plugin

Microbiome

Volumn 6, Issue 1, 2018, Pages

  Bokulich, Nicholas A ^a   Kaehler, Benjamin D ^b   Rideout, Jai Ram ^a   Dillon, Matthew ^a   Bolyen, Evan ^a   Knight, Rob ^c   Huttley, Gavin A ^b   Gregory Caporaso, J ^a  

^a NORTHERN ARIZONA UNIVERSITY   (United States)

^b AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA; RNA 16S; SPACER DNA;

ALGORITHM; AMPLICON; ARTICLE; COMPARATIVE STUDY; GENE; GENE SEQUENCE; HIGH THROUGHPUT SEQUENCING; MACHINE LEARNING; MARKER GENE; MICROBIAL COMMUNITY; MICROBIOME; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; QUALITY CONTROL; SEQUENCE ANALYSIS; TAXONOMY; BACTERIUM; COMPUTER SIMULATION; FUNGUS; GENETICS; MICROFLORA; NUCLEOTIDE SEQUENCE; PROCEDURES; SEQUENCE ALIGNMENT; SOFTWARE;

ALGORITHMS; BACTERIA; BASE SEQUENCE; COMPUTER SIMULATION; DNA, INTERGENIC; FUNGI; MACHINE LEARNING; MICROBIOTA; RNA, RIBOSOMAL, 16S; SEQUENCE ALIGNMENT; SOFTWARE;

EID: 85052651259     PISSN: None     EISSN: 20492618     Source Type: Journal    
DOI: 10.1186/s40168-018-0470-z     Document Type: Article

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