-
1
-
-
84979221733
-
Maize-GDB update:New tools, data and interface for the maize model organism database
-
Andorf, C.M., E.K. Cannon, J.L. Portwood, J.M. Gardiner, L.C. Harper, M.L. Schaeffer, B.L. Braun, D.A. Campbell, V.A. Vinnakota, V.V. Sribalusu, M. Huerta, K. Tak Cho, K. Wimalanathan, J.D. Richter, E.D. Mauch, B.S. Rao, S.M. Birkett, T.Z. Sen, and C.J. Lawrence-Dill. 2015. Maize-GDB update:new tools, data and interface for the maize model organism database. Nucleic Acids Res. 44:195–201.
-
(2015)
Nucleic Acids Res
, vol.44
, pp. 195-201
-
-
Andorf, C.M.1
Cannon, E.K.2
Portwood, J.L.3
Gardiner, J.M.4
Harper, L.C.5
Schaeffer, M.L.6
Braun, B.L.7
Campbell, D.A.8
Vinnakota, V.A.9
Sribalusu, V.V.10
Huerta, M.11
Cho, K.T.12
Wimalanathan, K.13
Richter, J.D.14
Mauch, E.D.15
Rao, B.S.16
Birkett, S.M.17
Sen, T.Z.18
Lawrence-Dill, C.J.19
-
2
-
-
78951473633
-
Contributions of flowering time genes to sunflower domestication and improvement
-
Blackman, B.K., D.A. Rasmussen, J.L. Strasburg, A.R. Raduski, J.M. Burke, S.J. Knapp, S.D. Michaels, and L.H. Rieseberg. 2011. Contributions of flowering time genes to sunflower domestication and improvement. Genetics 187:271–287. doi:10.1534/genetics.110.121327
-
(2011)
Genetics
, vol.187
, pp. 271-287
-
-
Blackman, B.K.1
Rasmussen, D.A.2
Strasburg, J.L.3
Raduski, A.R.4
Burke, J.M.5
Knapp, S.J.6
Michaels, S.D.7
Rieseberg, L.H.8
-
3
-
-
77953264996
-
Linkage and association mapping of Arabidopsis thaliana flowering time in nature
-
Brachi, B., N. Faure, M. Horton, E. Flahauw, A. Vazquez, M. Nordborg, J. Bergelson, J. Cuguen, and F. Roux. 2010. Linkage and association mapping of Arabidopsis thaliana flowering time in nature. PLoS Genet. 6:e1000940. doi:10.1371/journal.pgen.1000940
-
(2010)
Plos Genet
, vol.6
-
-
Brachi, B.1
Faure, N.2
Horton, M.3
Flahauw, E.4
Vazquez, A.5
Nordborg, M.6
Bergelson, J.7
Cuguen, J.8
Roux, F.9
-
4
-
-
35748946021
-
TASSEL: Software for association mapping of complex traits in diverse samples
-
Bradbury, P.J., Z. Zhang, D.E. Kroon, T.M. Casstevens, Y. Ramdoss, and E.S. Buckler. 2007. TASSEL: Software for association mapping of complex traits in diverse samples. Bioinformatics 23:2633–2635. doi:10.1093/bioinformatics/btm308
-
(2007)
Bioinformatics
, vol.23
, pp. 2633-2635
-
-
Bradbury, P.J.1
Zhang, Z.2
Kroon, D.E.3
Casstevens, T.M.4
Ramdoss, Y.5
Buckler, E.S.6
-
5
-
-
84865403874
-
Genotypic and phenotypic characterization of isogenic doubled haploid exotic introgression lines in maize
-
Brenner, E.A., M. Blanco, C. Gardner, and T. Lübberstedt. 2012. Genotypic and phenotypic characterization of isogenic doubled haploid exotic introgression lines in maize. Mol. Breed. 30:1001–1016. doi:10.1007/s11032-011-9684-5
-
(2012)
Mol. Breed.
, vol.30
, pp. 1001-1016
-
-
Brenner, E.A.1
Blanco, M.2
Gardner, C.3
Lübberstedt, T.4
-
6
-
-
68449083317
-
The genetic architecture of maize flowering time
-
Buckler, E.S., J.B. Holland, P.J. Bradbury, C.B. Acharya, P.J. Brown, C. Browne, E. Ersoz, S. Flint-Garcia, A. Garcia, J.C. Glaubitz, M.M. Goodman, C. Harjes, K. Guill, D.E. Kroon, S. Larsson, N.K. Lepak, H. Li, S.E. Mitchell, G. Pressoir, J.A. Peiffer, M.O. Rosas, T.R. Rocheford, M.C. Romay, S. Romero, S. Salvo, H.S. Villeda, H.S. de Silva, Q. Sun, F. Tian, N. Upadyayula, D. Ware, H. Yates, J. Yu, Z. Zhang, S. Kresovich, and M.D. McMullen. 2009. The genetic architecture of maize flowering time. Science 325:714–718. doi:10.1126/science.1174276
-
(2009)
Science
, vol.325
, pp. 714-718
-
-
Buckler, E.S.1
Holland, J.B.2
Bradbury, P.J.3
Acharya, C.B.4
Brown, P.J.5
Browne, C.6
Ersoz, E.7
Flint-Garcia, S.8
Garcia, A.9
Glaubitz, J.C.10
Goodman, M.M.11
Harjes, C.12
Guill, K.13
Kroon, D.E.14
Larsson, S.15
Lepak, N.K.16
Li, H.17
Mitchell, S.E.18
Pressoir, G.19
Peiffer, J.A.20
Rosas, M.O.21
Rocheford, T.R.22
Romay, M.C.23
Romero, S.24
Salvo, S.25
Villeda, H.S.26
de Silva, H.S.27
Sun, Q.28
Tian, F.29
Upadyayula, N.30
Ware, D.31
Yates, H.32
Yu, J.33
Zhang, Z.34
Kresovich, S.35
McMullen, M.D.36
more..
-
7
-
-
84868686736
-
PICARA, an analytical pipeline providing probabilistic inference about a prior candidates genes underlying genome-wide association QTL in plants
-
Chen, C., G. DeClerck, F. Tian, W. Spooner, S. McCouch, and E.S. Buckler. 2012. PICARA, an analytical pipeline providing probabilistic inference about a prior candidates genes underlying genome-wide association QTL in plants. PLoS One 7:e46596. doi:10.1371/journal.pone.0046596
-
(2012)
Plos One
, vol.7
-
-
Chen, C.1
Declerck, G.2
Tian, F.3
Spooner, W.4
McCouch, S.5
Buckler, E.S.6
-
8
-
-
84896705310
-
Small auxin upregulated RNA (SAUR) gene family in maize: Identification, evolution, and its phylogenetic comparison with Arabidopsis, rice, and sorghum
-
Chen, Y., X. Hao, and J. Cao. 2014. Small auxin upregulated RNA (SAUR) gene family in maize: Identification, evolution, and its phylogenetic comparison with Arabidopsis, rice, and sorghum. J. Integr. Plant Biol. 56:133–150. doi:10.1111/jipb.12127
-
(2014)
J. Integr. Plant Biol.
, vol.56
, pp. 133-150
-
-
Chen, Y.1
Hao, X.2
Cao, J.3
-
9
-
-
0034781050
-
A simple correction for multiple comparisons in interval mapping genome scans
-
Cheverud, J.M. 2001. A simple correction for multiple comparisons in interval mapping genome scans. Heredity 87:52–58. doi:10.1046/j.1365-2540.2001.00901.x
-
(2001)
Heredity
, vol.87
, pp. 52-58
-
-
Cheverud, J.M.1
-
10
-
-
0242666175
-
Human population: The next half century
-
Cohen, J. 2003. Human population: The next half century. Science 302:1172– 1175. doi:10.1126/science.1088665
-
(2003)
Science
, vol.302
, pp. 1172-1175
-
-
Cohen, J.1
-
11
-
-
53749085134
-
Involvement of the MADS-box gene ZMM4 in floral induction and inflorescence development in maize
-
Danilevskaya, O.N., X. Meng, D.A. Selinger, S. Deschamps, P. Hermon, G. Vansant, R. Gupta, E.V. Ananiev, and M.G. Muszynski. 2008. Involvement of the MADS-box gene ZMM4 in floral induction and inflorescence development in maize. Plant Physiol. 147:2054–2069. doi:10.1104/pp.107.115261
-
(2008)
Plant Physiol
, vol.147
, pp. 2054-2069
-
-
Danilevskaya, O.N.1
Meng, X.2
Selinger, D.A.3
Deschamps, S.4
Hermon, P.5
Vansant, G.6
Gupta, R.7
Ananiev, E.V.8
Muszynski, M.G.9
-
12
-
-
34547749471
-
Patterning the axis in plants-auxin in control
-
De Smet, I., and G. Jürgens. 2007. Patterning the axis in plants-auxin in control. Curr. Opin. Genet. Dev. 17:337–343. doi:10.1016/j.gde.2007.04.012
-
(2007)
Curr. Opin. Genet. Dev.
, vol.17
, pp. 337-343
-
-
de Smet, I.1
Jürgens, G.2
-
13
-
-
0001898426
-
Techniques for research in quantitative animal genetics
-
Am. Soc. Anim. Sci, New York, NY
-
Dickerson, G.E. 1969. Techniques for research in quantitative animal genetics In: Techniques and Procedures in Animal Science Research. Am. Soc. Anim. Sci, New York, NY.
-
(1969)
Techniques and Procedures in Animal Science Research
-
-
Dickerson, G.E.1
-
14
-
-
84865086356
-
A gene regulatory network model for floral transition of the shoot apex in maize and its dynamic modeling
-
Dong, Z., O. Danilevskaya, T. Abadie, C. Messina, N. Coles, and M. Cooper. 2012. A gene regulatory network model for floral transition of the shoot apex in maize and its dynamic modeling. PLoS One 7:e43450. doi:10.1371/journal.pone.0043450
-
(2012)
Plos One
, vol.7
-
-
Dong, Z.1
Danilevskaya, O.2
Abadie, T.3
Messina, C.4
Coles, N.5
Cooper, M.6
-
15
-
-
84859585404
-
Flowering time in maize: Linkage and epistasis at a major effect locus
-
Durand, E., S. Bouchet, P. Bertin, A. Ressayre, P. Jamin, A. Charcosset, C. Dillman, and M.I. Tenaillon. 2012. Flowering time in maize: Linkage and epistasis at a major effect locus. Genetics 190:1547–1562. doi:10.1534/genetics.111.136903
-
(2012)
Genetics
, vol.190
, pp. 1547-1562
-
-
Durand, E.1
Bouchet, S.2
Bertin, P.3
Ressayre, A.4
Jamin, P.5
Charcosset, A.6
Dillman, C.7
Tenaillon, M.I.8
-
16
-
-
79955783956
-
A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species
-
Elshire, R.J., J.C. Glaubitz, Q. Sun, J.A. Poland, K. Kawamoto, E.S. Buckler, and S.E. Mitchell. 2011. A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species. PLoS One 6(5):e19379. doi:10.1371/journal.pone.0019379
-
(2011)
Plos One
, vol.6
, Issue.5
-
-
Elshire, R.J.1
Glaubitz, J.C.2
Sun, Q.3
Poland, J.A.4
Kawamoto, K.5
Buckler, E.S.6
Mitchell, S.E.7
-
17
-
-
84871722099
-
The maize PIN gene family of auxin transporters
-
Forestan, C., S. Farinati, and S. Varotto. 2012. The maize PIN gene family of auxin transporters. Front. Plant Sci. 3:16. doi:10.3389/fpls.2012.00016
-
(2012)
Front. Plant Sci.
, vol.3
-
-
Forestan, C.1
Farinati, S.2
Varotto, S.3
-
18
-
-
84878289146
-
The role of auxin in shaping shoot architecture
-
Gallavotti, A. 2013. The role of auxin in shaping shoot architecture. J. Exp. Bot. 64:2593–2608. doi:10.1093/jxb/ert141
-
(2013)
J. Exp. Bot.
, vol.64
, pp. 2593-2608
-
-
Gallavotti, A.1
-
19
-
-
75649151064
-
Avoiding the high bonferroni penalty in genome-wide association studies
-
Gao, X., L.C. Becker, D.M. Becker, J.D. Starmer, and M.A. Province. 2010. Avoiding the high bonferroni penalty in genome-wide association studies. Genet. Epidemiol. 34:100–105.
-
(2010)
Genet. Epidemiol.
, vol.34
, pp. 100-105
-
-
Gao, X.1
Becker, L.C.2
Becker, D.M.3
Starmer, J.D.4
Province, M.A.5
-
20
-
-
43249090541
-
A multiple testing correction method for genetic association studies using correlated single nucleotide polymorphisms
-
Gao, X., J. Starmer, and E.R. Martin. 2008. A multiple testing correction method for genetic association studies using correlated single nucleotide polymorphisms. Genet. Epidemiol. 32:361–369. doi:10.1002/gepi.20310
-
(2008)
Genet. Epidemiol.
, vol.32
, pp. 361-369
-
-
Gao, X.1
Starmer, J.2
Martin, E.R.3
-
21
-
-
0038459045
-
Analysis of the molecular basis of flowering time in Arabidopsis accessions
-
Gazzani, S., A.R. Gendall, C. Lister, and C. Dean. 2003. Analysis of the molecular basis of flowering time in Arabidopsis accessions. Plant Physiol. 132:1107–1114. doi:10.1104/pp.103.021212
-
(2003)
Plant Physiol
, vol.132
, pp. 1107-1114
-
-
Gazzani, S.1
Gendall, A.R.2
Lister, C.3
Dean, C.4
-
22
-
-
84940707823
-
Producing a road map that enables plants to cope with future climate change
-
Halford, N.G., and C.H. Foyer. 2015. Producing a road map that enables plants to cope with future climate change. J. Exp. Bot. 66:3433–3434. doi:10.1093/jxb/erv277
-
(2015)
J. Exp. Bot.
, vol.66
, pp. 3433-3434
-
-
Halford, N.G.1
Foyer, C.H.2
-
23
-
-
84893800233
-
Adaptation of tropical maize germplasm to temperate environments
-
Hallauer, A.R., and M.J. Carena. 2014. Adaptation of tropical maize germplasm to temperate environments. Euphytica 196:1–11. doi:10.1007/s10681-013-1017-9
-
(2014)
Euphytica
, vol.196
, pp. 1-11
-
-
Hallauer, A.R.1
Carena, M.J.2
-
24
-
-
0003546136
-
Quantitative Genetics in Maize Breeding
-
Springer Science + Business Media, LLC, New York
-
Hallauer, A.R., M.J. Carena, and J.B. Miranda Filho. 1988. Quantitative Genetics in Maize Breeding, Handbook of Plant Breeding 6, Vol. 2. Springer Science + Business Media, LLC, New York. p. 145.
-
(1988)
Handbook of Plant Breeding 6
, vol.2
, pp. 145
-
-
Hallauer, A.R.1
Carena, M.J.2
Miranda Filho, J.B.3
-
27
-
-
84863955846
-
ZmCCT and the genetic basis of day-length adaptation underlying the postdomestication spread of maize
-
Hung, H.Y., L.M. Shannon, F. Tian, P.J. Bradbury, C. Chen, S.A. Flint-Garcia, M.D. McMullen, D. Ware, E.S. Buckler, J.F. Doebley, and J.B. Holland. 2012. ZmCCT and the genetic basis of day-length adaptation underlying the postdomestication spread of maize. Proc. Natl. Acad. Sci. USA 109:E1913–E1921. doi:10.1073/pnas.1203189109
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. E1913-E1921
-
-
Hung, H.Y.1
Shannon, L.M.2
Tian, F.3
Bradbury, P.J.4
Chen, C.5
Flint-Garcia, S.A.6
McMullen, M.D.7
Ware, D.8
Buckler, E.S.9
Doebley, J.F.10
Holland, J.B.11
-
28
-
-
0344080487
-
Comparative biology comes into bloom: Genomic and genetic comparison of flowering pathways in rice and Arabidopsis
-
Izawa, T., Y. Takahashi, and M. Yano. 2003. Comparative biology comes into bloom: Genomic and genetic comparison of flowering pathways in rice and Arabidopsis. Curr. Opin. Plant Biol. 6:113–120. doi:10.1016/S1369-5266(03)00014-1
-
(2003)
Curr. Opin. Plant Biol.
, vol.6
, pp. 113-120
-
-
Izawa, T.1
Takahashi, Y.2
Yano, M.3
-
29
-
-
84905638527
-
Regulation of inflorescence branch development in rice through a novel pathway involving pentatricopeptide repeat protein sped1-D
-
Jiang, G., Y. Xiang, J. Zhao, D. Yin, X. Zhao, L. Zhu, and W. Zhai. 2014. Regulation of inflorescence branch development in rice through a novel pathway involving pentatricopeptide repeat protein sped1-D. Genetics 197:1395–1407. doi:10.1534/genetics.114.163931
-
(2014)
Genetics
, vol.197
, pp. 1395-1407
-
-
Jiang, G.1
Xiang, Y.2
Zhao, J.3
Yin, D.4
Zhao, X.5
Zhu, L.6
Zhai, W.7
-
30
-
-
70349451699
-
Flowering time control and applications in plant breeding
-
Jung, C., and A.E. Müller. 2009. Flowering time control and applications in plant breeding. Trends Plant Sci. 14:563–573. doi:10.1016/j. tplants.2009.07.005
-
(2009)
Trends Plant Sci
, vol.14
, pp. 563-573
-
-
Jung, C.1
Müller, A.E.2
-
31
-
-
77957592239
-
Coordination of the maize transcriptome by a conserved circadian clock
-
Khan, S., S.C. Rowe, and F.G. Harmon. 2010. Coordination of the maize transcriptome by a conserved circadian clock. BMC Plant Biol. 10:126. doi:10.1186/1471-2229-10-126
-
(2010)
BMC Plant Biol
, vol.10
, pp. 126
-
-
Khan, S.1
Rowe, S.C.2
Harmon, F.G.3
-
32
-
-
78249285587
-
Two coordinately regulated homologs of FLOWERING LOCUS T are involved in the control of photoperiodic flowering in soybean
-
Kong, F., B. Liu, Z. Xia, S. Sato, B.M. Kim, S. Watanabee, T. Yamada, S. Tabata, A. Kanazawa, K. Harada, and J. Abe. 2010. Two coordinately regulated homologs of FLOWERING LOCUS T are involved in the control of photoperiodic flowering in soybean. Plant Physiol. 154:1220– 1231. doi:10.1104/pp.110.160796
-
(2010)
Plant Physiol
, vol.154
, pp. 1220-1231
-
-
Kong, F.1
Liu, B.2
Xia, Z.3
Sato, S.4
Kim, B.M.5
Watanabee, S.6
Yamada, T.7
Tabata, S.8
Kanazawa, A.9
Harada, K.10
Abe, J.11
-
33
-
-
33744963314
-
Auxin biosynthesis in maize
-
Kriechbaumer, V., W.J. Park, A. Gierl, and E. Glawischnig. 2006. Auxin biosynthesis in maize. Plant Physiol. 8:334–339.
-
(2006)
Plant Physiol
, vol.8
, pp. 334-339
-
-
Kriechbaumer, V.1
Park, W.J.2
Gierl, A.3
Glawischnig, E.4
-
34
-
-
0036010768
-
Expanding the genetic map of maize with the B73 x Mo17 (IBM) population
-
Lee, M., N. Sharopova, W.D. Beavis, D. Grant, M. Katt, D. Blair, and A. Hallauer. 2002. Expanding the genetic map of maize with the B73 x Mo17 (IBM) population. Plant Mol. Biol. 48:453–461. doi:10.1023/A:1014893521186
-
(2002)
Plant Mol. Biol.
, vol.48
, pp. 453-461
-
-
Lee, M.1
Sharopova, N.2
Beavis, W.D.3
Grant, D.4
Katt, M.5
Blair, D.6
Hallauer, A.7
-
35
-
-
84947764334
-
Genetic control of morphometric diversity in the maize shoot apical meristem
-
Leiboff, S., X. Li, H.C. Hu, N. Todt, J. Yang, X. Li, X. Yu, G.J. Muehlbauer, M.C.P. Timmermans, J. Yu, P.S. Schnable, and M.J. Scanlon. 2015. Genetic control of morphometric diversity in the maize shoot apical meristem. Nat. Commun. 6:8974. doi:10.1038/ncomms9974
-
(2015)
Nat. Commun.
, vol.6
-
-
Leiboff, S.1
Li, X.2
Hu, H.C.3
Todt, N.4
Yang, J.5
Li, X.6
Yu, X.7
Muehlbauer, G.J.8
Timmermans, M.C.P.9
Yu, J.10
Schnable, P.S.11
Scanlon, M.J.12
-
36
-
-
30744434862
-
Adjusting multiple testing in multilocus analyses using the eigenvalues of a correlation matrix
-
Li, J., and L. Ji. 2005. Adjusting multiple testing in multilocus analyses using the eigenvalues of a correlation matrix. Heredity 95:221–227. doi:10.1038/sj.hdy.6800717
-
(2005)
Heredity
, vol.95
, pp. 221-227
-
-
Li, J.1
Ji, L.2
-
37
-
-
84984905582
-
The systemic acquired resistance regulator OsNPR1 attenuates growth by repressing auxin signaling through promoting IAA-amido synthase expression
-
Li, X., D.L. Yang, L. Sun, Q. Li, B. Mao, and Z. He. 2016a. The systemic acquired resistance regulator OsNPR1 attenuates growth by repressing auxin signaling through promoting IAA-amido synthase expression. Plant Physiol. 172:546–558. doi:10.1104/pp.16.00129
-
(2016)
Plant Physiol
, vol.172
, pp. 546-558
-
-
Li, X.1
Yang, D.L.2
Sun, L.3
Li, Q.4
Mao, B.5
He, Z.6
-
38
-
-
85027938943
-
Identification of genetic variants associated with flowering time using an extremely large multi-genetic background population
-
Li, Y.X., P.J. Bradbury, X. Liu, F. Lu, C.M. Romay, J.C. Glaubitz, X. Wu, B. Peng, Y. Shi, Y. Song, D. Zhang, E.S. Buckler, Z. Zhang, Y. Li, and T. Wang. 2016b. Identification of genetic variants associated with flowering time using an extremely large multi-genetic background population. Plant J. 86:391–402. doi:10.1111/tpj.13174
-
(2016)
Plant J
, vol.86
, pp. 391-402
-
-
Li, Y.X.1
Bradbury, P.J.2
Liu, X.3
Lu, F.4
Romay, C.M.5
Glaubitz, J.C.6
Wu, X.7
Peng, B.8
Shi, Y.9
Song, Y.10
Zhang, D.11
Buckler, E.S.12
Zhang, Z.13
Li, Y.14
Wang, T.15
-
39
-
-
84866467273
-
GAPIT: Genome association and prediction integrated tool
-
Lipka, A.E., F. Tian, Q. Wang, J. Peiffer, M. Li, P.J. Bradbury, M.A. Gore, E.S. Buckler, and Z. Zhang. 2012. GAPIT: Genome association and prediction integrated tool. Bioinformatics 28:2397–2399. doi:10.1093/bioinformatics/bts444
-
(2012)
Bioinformatics
, vol.28
, pp. 2397-2399
-
-
Lipka, A.E.1
Tian, F.2
Wang, Q.3
Peiffer, J.4
Li, M.5
Bradbury, P.J.6
Gore, M.A.7
Buckler, E.S.8
Zhang, Z.9
-
40
-
-
84959921345
-
Iterative Usage of Fixed and Random Effect Models for Powerful and Efficient Genome-Wide Association Studies
-
Liu, X., M. Haung, B. Fan, E.S. Buckler, and Z. Zhang. 2016. Iterative Usage of Fixed and Random Effect Models for Powerful and Efficient Genome-Wide Association Studies. PLoS Genet. 12(2):e1005767. doi:10.1371/journal.pgen.1005767
-
(2016)
Plos Genet
, vol.12
, Issue.2
-
-
Liu, X.1
Haung, M.2
Fan, B.3
Buckler, E.S.4
Zhang, Z.5
-
41
-
-
79952745764
-
Genome-wide analysis of the auxin response factor (ARF) gene family in maize (Zea mays)
-
Liu, Y., H.Y. Jiang, W. Chen, Y. Qian, Q. Ma, B. Cheng, and S. Zhu. 2011. Genome-wide analysis of the auxin response factor (ARF) gene family in maize (Zea mays). Plant Growth Regul. 63:225–234. doi:10.1007/s10725-010-9519-0
-
(2011)
Plant Growth Regul
, vol.63
, pp. 225-234
-
-
Liu, Y.1
Jiang, H.Y.2
Chen, W.3
Qian, Y.4
Ma, Q.5
Cheng, B.6
Zhu, S.7
-
42
-
-
84940676678
-
Exploiting genetic diversity from landraces in wheat breeding for adaptation to climate change
-
Lopes, M.S., I. El-Basyoni, P.S. Baenzinger, S. Singh, C. Royo, K. Ozbek, H. Aktas, E. Ozer, F. Ozdemit, A. Manickavelu, T. Ban, and P. Vikram. 2015. Exploiting genetic diversity from landraces in wheat breeding for adaptation to climate change. J. Exp. Bot. 66:3477–3486. doi:10.1093/jxb/erv122
-
(2015)
J. Exp. Bot.
, vol.66
, pp. 3477-3486
-
-
Lopes, M.S.1
El-Basyoni, I.2
Baenzinger, P.S.3
Singh, S.4
Royo, C.5
Ozbek, K.6
Aktas, H.7
Ozer, E.8
Ozdemit, F.9
Manickavelu, A.10
Ban, T.11
Vikram, P.12
-
43
-
-
67649515019
-
Auxin-induced, SCF(TIR1)-mediated poly-ubiquitination marks AUX/IAA proteins for degradation
-
Maraschin, F.S., J. Memelink, and R. Offringa. 2009. Auxin-induced, SCF(TIR1)-mediated poly-ubiquitination marks AUX/IAA proteins for degradation. Plant J. 59:100–109. doi:10.1111/j.1365-313X.2009.03854.x
-
(2009)
Plant J
, vol.59
, pp. 100-109
-
-
Maraschin, F.S.1
Memelink, J.2
Offringa, R.3
-
44
-
-
84873513977
-
The flowering repressor SVP underlies a novel Arabidopsis thaliana QTL interacting with the genetic background
-
Méndez-Vigo, B., J.M. Martínez-Zapater, and C. Alonso-Blanco. 2013. The flowering repressor SVP underlies a novel Arabidopsis thaliana QTL interacting with the genetic background. PLoS Genet. 9:e1003289.
-
(2013)
Plos Genet
, vol.9
-
-
Méndez-Vigo, B.1
Martínez-Zapater, J.M.2
Alonso-Blanco, C.3
-
46
-
-
84938421504
-
Exploiting natural variation in exotic germplasm for increasing provitamin-A carotenoids in tropical maize
-
Menkir, A., T. Rocheford, B. Maziya-Dixon, and S. Tanumihardjo. 2015. Exploiting natural variation in exotic germplasm for increasing provitamin-A carotenoids in tropical maize. Euphytica 205:203–217. doi:10.1007/s10681-015-1426-z
-
(2015)
Euphytica
, vol.205
, pp. 203-217
-
-
Menkir, A.1
Rocheford, T.2
Maziya-Dixon, B.3
Tanumihardjo, S.4
-
47
-
-
50249187303
-
On multiple-testing correction in genome-wide association studies
-
Moskvina, V., and K.M. Schmidt. 2008. On multiple-testing correction in genome-wide association studies. Genet. Epidemiol. 32:567–573. doi:10.1002/gepi.20331
-
(2008)
Genet. Epidemiol.
, vol.32
, pp. 567-573
-
-
Moskvina, V.1
Schmidt, K.M.2
-
48
-
-
67649525152
-
Subcellular homeostasis of phytohormone auxin is mediated by the ER-localized PIN5 transporter
-
Mravec, J., P. Skupa, A. Bailly, K. Hoyerova, P. Krecek, A. Bielach, J. Petrasek, J. Zhang, V. Gaykova, Y.D. Stierhof, P.I. Dobrev, K. Schwarzerova, J. Rolcik, D. Seifertova, C. Luschnig, E. Benkova, E. Zazimalova, Geisler, M., and J. Friml. 2009. Subcellular homeostasis of phytohormone auxin is mediated by the ER-localized PIN5 transporter. Nature 459:1136– 1140. doi:10.1038/nature08066
-
(2009)
Nature
, vol.459
, pp. 1136-1140
-
-
Mravec, J.1
Skupa, P.2
Bailly, A.3
Hoyerova, K.4
Krecek, P.5
Bielach, A.6
Petrasek, J.7
Zhang, J.8
Gaykova, V.9
Stierhof, Y.D.10
Dobrev, P.I.11
Schwarzerova, K.12
Rolcik, J.13
Seifertova, D.14
Luschnig, C.15
Benkova, E.16
Zazimalova, E.17
Geisler, M.18
Friml, J.19
-
49
-
-
80053632751
-
Coincident light and clock regulation of pseudoresponse regulator protein 37 (PRR37) controls photoperiod flowering in sorghum
-
Murphy, R.L., R.R. Klein, D.T. Morishige, J.A. Brady, W.L. Rooney, F.R. Miller, D.V. Dugas, P.E. Klein, and J.E. Mullet. 2011. Coincident light and clock regulation of pseudoresponse regulator protein 37 (PRR37) controls photoperiod flowering in sorghum. Proc. Natl. Acad. Sci. USA 108:16469–16474. doi:10.1073/pnas.1106212108
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 16469-16474
-
-
Murphy, R.L.1
Klein, R.R.2
Morishige, D.T.3
Brady, J.A.4
Rooney, W.L.5
Miller, F.R.6
Dugas, D.V.7
Klein, P.E.8
Mullet, J.E.9
-
50
-
-
33845661508
-
Delayed flower-ing1 encodes a basic leucine zipper protein that mediates floral inductive signals at the shoot apex in maize
-
Muszynski, M.G., T. Dam, B. Li, D.M. Shirbroun, Z. Hou, E. Bruggemann, R. Archibald, E.V. Ananiev, and O.N. Danilevskaya. 2006. delayed flower-ing1 encodes a basic leucine zipper protein that mediates floral inductive signals at the shoot apex in maize. Plant Physiol. 142:1523–1536. doi:10.1104/pp.106.088815
-
(2006)
Plant Physiol
, vol.142
, pp. 1523-1536
-
-
Muszynski, M.G.1
Dam, T.2
Li, B.3
Shirbroun, D.M.4
Hou, Z.5
Bruggemann, E.6
Archibald, R.7
Ananiev, E.V.8
Danilevskaya, O.N.9
-
51
-
-
0141907762
-
Characterization and functional analysis of three wheat genes with homology to the CONSTANS flowering time gene in transgenic rice
-
Nemoto, Y., M. Kisaka, T. Fuse, M. Yano, and Y. Ogihara. 2003. Characterization and functional analysis of three wheat genes with homology to the CONSTANS flowering time gene in transgenic rice. Plant J. 36:82-93.
-
(2003)
Plant J
, vol.36
, pp. 82-93
-
-
Nemoto, Y.1
Kisaka, M.2
Fuse, T.3
Yano, M.4
Ogihara, Y.5
-
52
-
-
1842539516
-
A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium and each other
-
Nyholt, D.R. 2004. A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium and each other. Am. J. Hum. Genet. 74:765–769. doi:10.1086/383251
-
(2004)
Am. J. Hum. Genet.
, vol.74
, pp. 765-769
-
-
Nyholt, D.R.1
-
53
-
-
84860490535
-
TEMPRA-NILLO genes link photoperiod and gibberellin pathways to control flowering in Arabidopsis
-
Osnato, M., C. Castillejo, L. Matías-Hernández, and S. Pelaz. 2012. TEMPRA-NILLO genes link photoperiod and gibberellin pathways to control flowering in Arabidopsis. Nat. Commun. 3:808. doi:10.1038/ncomms1810
-
(2012)
Nat. Commun.
, vol.3
-
-
Osnato, M.1
Castillejo, C.2
Matías-Hernández, L.3
Pelaz, S.4
-
54
-
-
84901312138
-
The genetic architecture of maize height
-
Peiffer, J.A., M.C. Romay, M.A. Gore, S.A. Flint-Garcia, Z. Shang, M.J. Millard, C.A.C. Gardner, M.D. McMullen, J.B. Holland, P.J. Bradbury, and E.S. Buckler. 2014. The genetic architecture of maize height. Genetics 196:1337–1356. doi:10.1534/genetics.113.159152
-
(2014)
Genetics
, vol.196
, pp. 1337-1356
-
-
Peiffer, J.A.1
Romay, M.C.2
Gore, M.A.3
Flint-Garcia, S.A.4
Shang, Z.5
Millard, M.J.6
Gardner, C.A.C.7
McMullen, M.D.8
Holland, J.B.9
Bradbury, P.J.10
Buckler, E.S.11
-
56
-
-
84886257715
-
Arabidopsis WAT1 is a vacuolar auxin transport facilitator required for auxin homeostasis
-
Ranocha, P., O. Dima, R. Nagy, J. Felten, C. Corratgé-Faillie, O. Novák, K. Morreel, B. Lacombe, Y. Martinez, S. Pfrunder, X. Jin, J.P. Renou, J.B. Thibaud, K. Ljung, U. Fischer, E. Martinoia, W. Boerjan, and D. Goffner. 2013. Arabidopsis WAT1 is a vacuolar auxin transport facilitator required for auxin homeostasis. Nat. Commun. 4:2625. doi:10.1038/ncomms3625
-
(2013)
Nat. Commun.
, vol.4
-
-
Ranocha, P.1
Dima, O.2
Nagy, R.3
Felten, J.4
Corratgé-Faillie, C.5
Novák, O.6
Morreel, K.7
Lacombe, B.8
Martinez, Y.9
Pfrunder, S.10
Jin, X.11
Renou, J.P.12
Thibaud, J.B.13
Ljung, K.14
Fischer, U.15
Martinoia, E.16
Boerjan, W.17
Goffner, D.18
-
57
-
-
84898638467
-
Global maize production, utilization, and consumption
-
Ranum, P., J.P. Peña-Rosas, and M.N. Garcis-Casal. 2014. Global maize production, utilization, and consumption. Ann. N. Y. Acad. Sci. 1321:105–112.
-
(2014)
Ann. N. Y. Acad. Sci.
, vol.1321
, pp. 105-112
-
-
Ranum, P.1
Peña-Rosas, J.P.2
Garcis-Casal, M.N.3
-
58
-
-
84938748087
-
SAUR proteins as effectors of hormonal and environmental signals in plant growth
-
Ren, H., and W.M. Gray. 2015. SAUR proteins as effectors of hormonal and environmental signals in plant growth. Mol. Plant 8:1153–1164. doi:10.1016/j.molp.2015.05.003
-
(2015)
Mol. Plant
, vol.8
, pp. 1153-1164
-
-
Ren, H.1
Gray, W.M.2
-
59
-
-
33845690372
-
In: Vivo haploid induction in maize-Performance of new inducers and significance of doubled haploid lines in hybrid breeding
-
Röber, F.K., G.A. Gordillo, and H.H. Geiger. 2005. In: vivo haploid induction in maize-Performance of new inducers and significance of doubled haploid lines in hybrid breeding. Maydica 50:275–283.
-
(2005)
Maydica
, vol.50
, pp. 275-283
-
-
Röber, F.K.1
Gordillo, G.A.2
Geiger, H.H.3
-
60
-
-
84878685948
-
Comprehensive genotyping of the USA national maize inbred seed bank
-
Romay, C.M., M.J. Millard, J.C. Glaubitz, J.A. Peiffer, K.L. Swarts, T.M. Casstevens, R.J. Elshire, C.B. Acharya, S.E. Mitchell, S.A. Flint-Garcia, M.D. McMullen, J.B. Holland, E.S. Buckler, and C.A. Gardner. 2013. Comprehensive genotyping of the USA national maize inbred seed bank. Genome Biol. 14:R55. doi:10.1186/gb-2013-14-6-r55
-
(2013)
Genome Biol
, vol.14
, pp. 55
-
-
Romay, C.M.1
Millard, M.J.2
Glaubitz, J.C.3
Peiffer, J.A.4
Swarts, K.L.5
Casstevens, T.M.6
Elshire, R.J.7
Acharya, C.B.8
Mitchell, S.E.9
Flint-Garcia, S.A.10
McMullen, M.D.11
Holland, J.B.12
Buckler, E.S.13
Gardner, C.A.14
-
61
-
-
0000246384
-
Registration of B70 and B73 parental lines of maize
-
Russell, W.A. 1972. Registration of B70 and B73 parental lines of maize. Crop Sci. 12:721. doi:10.2135/cropsci1972.0011183X001200050085x
-
(1972)
Crop Sci
, vol.12
, pp. 721
-
-
Russell, W.A.1
-
62
-
-
34547398400
-
Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maize
-
Salvi, S., G. Sponza, M. Morgante, D. Tomes, X. Niu, K.A. Fengler, R. Mee-ley, E.V. Ananiev, S. Svitashev, E. Bruggemann, B. Li, C.F. Hainey, S. Radovic, G. Zaina, J. Antoni Rafalski, S.V. Tingey, G.H. Miao, R.L. Phillips, and R. Tuberosa. 2007. Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maize. Proc. Natl. Acad. Sci. USA 104:11376–11381. doi:10.1073/pnas.0704145104
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 11376-11381
-
-
Salvi, S.1
Sponza, G.2
Morgante, M.3
Tomes, D.4
Niu, X.5
Fengler, K.A.6
Mee-Ley, R.7
Ananiev, E.V.8
Svitashev, S.9
Bruggemann, E.10
Li, B.11
Hainey, C.F.12
Radovic, S.13
Zaina, G.14
Antoni Rafalski, J.15
Tingey, S.V.16
Miao, G.H.17
Phillips, R.L.18
Tuberosa, R.19
-
63
-
-
70450202132
-
The B73 maize genome: Complexity, diversity
-
Schnable, P.S., D. Ware, R.S. Fulton, J.C. Stein, F. Wei, S. Pasternak, C. Liang, J. Zhang, L. Fulton, T.A. Graves, et al. 2009. The B73 maize genome: Complexity, diversity, and dynamics. Science 326:1112–1115.
-
(2009)
And Dynamics. Science
, vol.326
, pp. 1112-1115
-
-
Schnable, P.S.1
Ware, D.2
Fulton, R.S.3
Stein, J.C.4
Wei, F.5
Pasternak, S.6
Liang, C.7
Zhang, J.8
Fulton, L.9
Graves, T.A.10
-
64
-
-
84855654255
-
CONSTANS and ASYMMETRIC LEAVES 1 complex is involved in the induction of FLOWERING LOCUS T in photoperiodic flowering in Arabidopsis
-
Song, Y.H., I. Lee, S.Y. Lee, T. Imaizumi, and J.C. Hong. 2012. CONSTANS and ASYMMETRIC LEAVES 1 complex is involved in the induction of FLOWERING LOCUS T in photoperiodic flowering in Arabidopsis. Plant J. 69:332–342. doi:10.1111/j.1365-313X.2011.04793.x
-
(2012)
Plant J
, vol.69
, pp. 332-342
-
-
Song, Y.H.1
Lee, I.2
Lee, S.Y.3
Imaizumi, T.4
Hong, J.C.5
-
65
-
-
84873048968
-
ZmGA3ox2, a candidate gene for a major QTL, qPH3.1, for plant height in maize
-
Teng, F., L. Zhai, R. Liu, W. Bai, L. Wang, D. Huo, Y. Tao, Y. Zheng, and Z. Zhang. 2013. ZmGA3ox2, a candidate gene for a major QTL, qPH3.1, for plant height in maize. Plant J. 73:405–416. doi:10.1111/tpj.12038
-
(2013)
Plant J
, vol.73
, pp. 405-416
-
-
Teng, F.1
Zhai, L.2
Liu, R.3
Bai, W.4
Wang, L.5
Huo, D.6
Tao, Y.7
Zheng, Y.8
Zhang, Z.9
-
67
-
-
55849133422
-
Efficient methods to compute genomic predictions
-
VanRaden, P.M. 2008. Efficient methods to compute genomic predictions. J. Dairy Sci. 91:4414–4423. doi:10.3168/jds.2007-0980
-
(2008)
J. Dairy Sci.
, vol.91
, pp. 4414-4423
-
-
Vanraden, P.M.1
-
68
-
-
84958891563
-
Overexpression of GA20-OXIDASE1 impacts plant height, biomass allocation and saccharification efficiency in maize
-
Voorend, W., H. Nelissen, R. Vanholme, A. De Vliegher, F. Van Breuse-gem, W. Boerjan, I. Roldán-Ruiz, H. Muylle, and D. Inzé. 2016. Overexpression of GA20-OXIDASE1 impacts plant height, biomass allocation and saccharification efficiency in maize. Plant Biotechnol. J. 14:997–1007. doi:10.1111/pbi.12458
-
(2016)
Plant Biotechnol. J.
, vol.14
, pp. 997-1007
-
-
Voorend, W.1
Nelissen, H.2
Vanholme, R.3
de Vliegher, A.4
van Breuse-Gem, F.5
Boerjan, W.6
Roldán-Ruiz, I.7
Muylle, H.8
Inzé, D.9
-
69
-
-
80052307056
-
Prototype cell-to-cell auxin transport mechanism by intercellular auxin compartmentalization
-
Wabnik, W., J. Kleine-Vehn, W. Govaerts, and J. Friml. 2011. Prototype cell-to-cell auxin transport mechanism by intercellular auxin compartmentalization. Trends Plant Sci. 16:468–475. doi:10.1016/j. tplants.2011.05.002
-
(2011)
Trends Plant Sci
, vol.16
, pp. 468-475
-
-
Wabnik, W.1
Kleine-Vehn, J.2
Govaerts, W.3
Friml, J.4
-
70
-
-
84984808208
-
Genome-wide association for plant height and flowering time across 15 tropical maize populations under managed drought stress and well-watered conditions in sub-Saharan Africa
-
Wallace, J., X. Zhang, Y. Beyene, K. Semagn, M. Olsen, B. Prasanna, and E.S. Buckler. 2016. Genome-wide association for plant height and flowering time across 15 tropical maize populations under managed drought stress and well-watered conditions in sub-Saharan Africa. Crop Sci. 56:2365–2378. doi:10.2135/cropsci2015.10.0632
-
(2016)
Crop Sci
, vol.56
, pp. 2365-2378
-
-
Wallace, J.1
Zhang, X.2
Beyene, Y.3
Semagn, K.4
Olsen, M.5
Prasanna, B.6
Buckler, E.S.7
-
71
-
-
84878916296
-
Gibberellin biosynthetic deficiency is responsible for maize dominant dwarf11 (D11) mutant phenotype: Physiological and transcriptomic evidence
-
Wang, Y., D. Deng, H. Ding, X. Xu, R. Zhang, S. Wang, Y. Bian, Z. Yin, and Y. Chen. 2013. Gibberellin biosynthetic deficiency is responsible for maize dominant dwarf11 (D11) mutant phenotype: Physiological and transcriptomic evidence. PLoS One 8:e66466. doi:10.1371/journal.pone.0066466
-
(2013)
Plos One
, vol.8
-
-
Wang, Y.1
Deng, D.2
Ding, H.3
Xu, X.4
Zhang, R.5
Wang, S.6
Bian, Y.7
Yin, Z.8
Chen, Y.9
-
72
-
-
84863850809
-
Diversity, phenology, and evolution of auxin response factor (ARF) family: Insights gain from analyzing maize ARF genes
-
Wang, Y., D. Deng, Y. Shi, N. Miao, Y. Bian, and Z. Yin. 2012. Diversity, phenology, and evolution of auxin response factor (ARF) family: Insights gain from analyzing maize ARF genes. Mol. Biol. Rep. 39:2401–2415. doi:10.1007/s11033-011-0991-z
-
(2012)
Mol. Biol. Rep.
, vol.39
, pp. 2401-2415
-
-
Wang, Y.1
Deng, D.2
Shi, Y.3
Miao, N.4
Bian, Y.5
Yin, Z.6
-
73
-
-
34547634071
-
Physical and genetic structure of the maize genome reflects its complex evolutionary history
-
Wei, F., E. Coe, W. Nelson, A.K. Bharti, F. Engler, E. Butler, H.R. Kim, J.L. Goicoechea, M. Chen, S. Lee, G. Fuks, H. Sanchez-Villeda, S. Schroeder, Z. Fang, M. McMullen, G. Davis, J.E. Bowers, A.H. Paterson, M. Schaeffer, J. Gardiner, K. Cone, J. Messing, C. Soderlund, and R.A. Wing. 2007. Physical and genetic structure of the maize genome reflects its complex evolutionary history. PLoS Genet. 3:e123. doi:10.1371/journal.pgen.0030123
-
(2007)
Plos Genet
, vol.3
-
-
Wei, F.1
Coe, E.2
Nelson, W.3
Bharti, A.K.4
Engler, F.5
Butler, E.6
Kim, H.R.7
Goicoechea, J.L.8
Chen, M.9
Lee, S.10
Fuks, G.11
Sanchez-Villeda, H.12
Schroeder, S.13
Fang, Z.14
McMullen, M.15
Davis, G.16
Bowers, J.E.17
Paterson, A.H.18
Schaeffer, M.19
Gardiner, J.20
Cone, K.21
Messing, J.22
Soderlund, C.23
Wing, R.A.24
more..
-
74
-
-
0031441767
-
Recovering Information in Augmented Designs, Using SAS PROC GLM and PROC MIXED
-
Wolfinger, R.D., W.T. Federer, and O. Codero-Brana. 1997. Recovering Information in Augmented Designs, Using SAS PROC GLM and PROC MIXED. Agron. J. 89:856–859. doi:10.2134/agronj1997.00021 962008900060002x
-
(1997)
Agron. J.
, vol.89
, pp. 856-859
-
-
Wolfinger, R.D.1
Federer, W.T.2
Codero-Brana, O.3
-
75
-
-
19744371138
-
The effects of artificial selection on the maize genome
-
Wright, S.I., I.V. Bi, S.G. Schroeder, M. Yamasaki, J.F. Doebley, M.D. McMullen, and B.S. Gaut. 2005. The effects of artificial selection on the maize genome. Science 308:1310–1314. doi:10.1126/science.1107891
-
(2005)
Science
, vol.308
, pp. 1310-1314
-
-
Wright, S.I.1
Bi, I.V.2
Schroeder, S.G.3
Yamasaki, M.4
Doebley, J.F.5
McMullen, M.D.6
Gaut, B.S.7
-
76
-
-
84885829511
-
CACTA-like transposable element in ZmCCT attenuated photoperiod sensitivity and accelerated the postdomestication spread of maize
-
Yang, Q., Z. Li, W. Li, L. Ku, C. Wang, J. Ye, K. Li, N. Yang, Y. Li, T. Zhong, J. Li, Y. Chen, J. Yan, Z. Yang, and M. Xu. 2013. CACTA-like transposable element in ZmCCT attenuated photoperiod sensitivity and accelerated the postdomestication spread of maize. Proc. Natl. Acad. Sci. USA 110:16969–16974. doi:10.1073/pnas.1310949110
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 16969-16974
-
-
Yang, Q.1
Li, Z.2
Li, W.3
Ku, L.4
Wang, C.5
Ye, J.6
Li, K.7
Yang, N.8
Li, Y.9
Zhong, T.10
Li, J.11
Chen, Y.12
Yan, J.13
Yang, Z.14
Xu, M.15
-
77
-
-
31744440502
-
A unified mixed-model method for association mapping that accounts for multiple levels of relatedness
-
Yu, J., G. Pressoir, W.H. Briggs, I.V. Bi, M. Yamasaki, J.F. Doebley, M.D. McMullen, B.S. Gaut, D.M. Nielsen, J.B. Holland, S. Kresovich, and E.S. Buckler. 2006. A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nat. Genet. 38:203–208. doi:10.1038/ng1702
-
(2006)
Nat. Genet.
, vol.38
, pp. 203-208
-
-
Yu, J.1
Pressoir, G.2
Briggs, W.H.3
Bi, I.V.4
Yamasaki, M.5
Doebley, J.F.6
McMullen, M.D.7
Gaut, B.S.8
Nielsen, D.M.9
Holland, J.B.10
Kresovich, S.11
Buckler, E.S.12
-
78
-
-
0000860835
-
Registration of 20 maize parental lines
-
Zuber, M.S. 1973. Registration of 20 maize parental lines. Crop Sci. 13:779– 780. doi:10.2135/cropsci1973.0011183X001300060085x
-
(1973)
Crop Sci
, vol.13
, pp. 779-780
-
-
Zuber, M.S.1
|