-
1
-
-
84885883079
-
FAOSTAT.
-
FAOSTAT, http://faostat.fao.org
-
-
-
-
2
-
-
0037047037
-
Intraspecific violation of genetic colinearity and its implications in maize.
-
10.1073/pnas.132259199, 123182, 12060715
-
Fu H, Dooner HK. Intraspecific violation of genetic colinearity and its implications in maize. Proc Natl Acad Sci USA 2002, 99:9573-9578. 10.1073/pnas.132259199, 123182, 12060715.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 9573-9578
-
-
Fu, H.1
Dooner, H.K.2
-
3
-
-
25144488228
-
Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize.
-
10.1038/ng1615, 16056225
-
Morgante M, Brunner S, Pea G, Fengler K, Zuccolo A, Rafalski A. Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize. Nat Genet 2005, 37:997-1002. 10.1038/ng1615, 16056225.
-
(2005)
Nat Genet
, vol.37
, pp. 997-1002
-
-
Morgante, M.1
Brunner, S.2
Pea, G.3
Fengler, K.4
Zuccolo, A.5
Rafalski, A.6
-
4
-
-
84863007735
-
Maize HapMap2 identifies extant variation from a genome in flux.
-
10.1038/ng.2313, 22660545
-
Chia J-M, Song C, Bradbury PJ, Costich D, De Leon N, Doebley J, Elshire RJ, Gaut B, Geller L, Glaubitz JC, Gore M, Guill KE, Holland J, Hufford MB, Lai J, Li M, Liu X, Lu Y, McCombie R, Nelson R, Poland J, Prasanna BM, Pyhäjärvi T, Rong T, Sekhon RS, Sun Q, Tenaillon MI, Tian F, Wang J, Xu X, et al. Maize HapMap2 identifies extant variation from a genome in flux. Nat Genet 2012, 44:803-807. 10.1038/ng.2313, 22660545.
-
(2012)
Nat Genet
, vol.44
, pp. 803-807
-
-
Chia, J.-M.1
Song, C.2
Bradbury, P.J.3
Costich, D.4
De Leon, N.5
Doebley, J.6
Elshire, R.J.7
Gaut, B.8
Geller, L.9
Glaubitz, J.C.10
Gore, M.11
Guill, K.E.12
Holland, J.13
Hufford, M.B.14
Lai, J.15
Li, M.16
Liu, X.17
Lu, Y.18
McCombie, R.19
Nelson, R.20
Poland, J.21
Prasanna, B.M.22
Pyhäjärvi, T.23
Rong, T.24
Sekhon, R.S.25
Sun, Q.26
Tenaillon, M.I.27
Tian, F.28
Wang, J.29
Xu, X.30
more..
-
7
-
-
0347991996
-
Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites.
-
1462894, 14704191
-
Liu K, Goodman M, Muse S, Smith JS, Buckler ES, Doebley J. Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites. Genetics 2003, 165:2117-2128. 1462894, 14704191.
-
(2003)
Genetics
, vol.165
, pp. 2117-2128
-
-
Liu, K.1
Goodman, M.2
Muse, S.3
Smith, J.S.4
Buckler, E.S.5
Doebley, J.6
-
8
-
-
31744444117
-
Maize association population: a high-resolution platform for quantitative trait locus dissection.
-
10.1111/j.1365-313X.2005.02591.x, 16359397
-
Flint-Garcia S, Thuillet A-C, Yu J, Pressoir G, Romero SM, Mitchell SE, Doebley J, Kresovich S, Goodman MM, Buckler ES. Maize association population: a high-resolution platform for quantitative trait locus dissection. Plant J 2005, 44:1054-1064. 10.1111/j.1365-313X.2005.02591.x, 16359397.
-
(2005)
Plant J
, vol.44
, pp. 1054-1064
-
-
Flint-Garcia, S.1
Thuillet, A.-C.2
Yu, J.3
Pressoir, G.4
Romero, S.M.5
Mitchell, S.E.6
Doebley, J.7
Kresovich, S.8
Goodman, M.M.9
Buckler, E.S.10
-
9
-
-
81255144862
-
Characterization of a global germplasm collection and its potential utilization for analysis of complex quantitative traits in maize.
-
Yang X, Gao S, Xu S, Zhang Z, Prasanna BM, Li L, Li J, Yan J. Characterization of a global germplasm collection and its potential utilization for analysis of complex quantitative traits in maize. Mol Breed 2010, 28:511-526.
-
(2010)
Mol Breed
, vol.28
, pp. 511-526
-
-
Yang, X.1
Gao, S.2
Xu, S.3
Zhang, Z.4
Prasanna, B.M.5
Li, L.6
Li, J.7
Yan, J.8
-
10
-
-
79953686775
-
Effect of population structure corrections on the results of association mapping tests in complex maize diversity panels.
-
10.1007/s00122-010-1519-y, 3057001, 21221527
-
Mezmouk S, Dubreuil P, Bosio M, Décousset L, Charcosset A, Praud S, Mangin B. Effect of population structure corrections on the results of association mapping tests in complex maize diversity panels. Theor Appl Genet 2011, 122:1149-1160. 10.1007/s00122-010-1519-y, 3057001, 21221527.
-
(2011)
Theor Appl Genet
, vol.122
, pp. 1149-1160
-
-
Mezmouk, S.1
Dubreuil, P.2
Bosio, M.3
Décousset, L.4
Charcosset, A.5
Praud, S.6
Mangin, B.7
-
11
-
-
79952509464
-
Association mapping for enhancing maize (Zea mays L.) genetic improvement.
-
Yan J, Warburton M, Crouch J. Association mapping for enhancing maize (Zea mays L.) genetic improvement. Crop Sci 2011, 51:433-449.
-
(2011)
Crop Sci
, vol.51
, pp. 433-449
-
-
Yan, J.1
Warburton, M.2
Crouch, J.3
-
12
-
-
79251561130
-
Genome-wide association study of leaf architecture in the maize nested association mapping population.
-
10.1038/ng.746, 21217756
-
Tian F, Bradbury PJ, Brown PJ, Hung H, Sun Q, Flint-Garcia S, Rocheford TR, McMullen MD, Holland JB, Buckler ES. Genome-wide association study of leaf architecture in the maize nested association mapping population. Nat Genet 2011, 43:159-162. 10.1038/ng.746, 21217756.
-
(2011)
Nat Genet
, vol.43
, pp. 159-162
-
-
Tian, F.1
Bradbury, P.J.2
Brown, P.J.3
Hung, H.4
Sun, Q.5
Flint-Garcia, S.6
Rocheford, T.R.7
McMullen, M.D.8
Holland, J.B.9
Buckler, E.S.10
-
13
-
-
79955783956
-
A robust, simple Genotyping-by-Sequencing (GBS) approach for high diversity species.
-
10.1371/journal.pone.0019379, 3087801, 21573248
-
Elshire RJ, Glaubitz JC, Sun Q, Poland JA, Kawamoto K, Buckler ES, Mitchell SE. A robust, simple Genotyping-by-Sequencing (GBS) approach for high diversity species. PLoS One 2011, 6:e19379. 10.1371/journal.pone.0019379, 3087801, 21573248.
-
(2011)
PLoS One
, vol.6
-
-
Elshire, R.J.1
Glaubitz, J.C.2
Sun, Q.3
Poland, J.A.4
Kawamoto, K.5
Buckler, E.S.6
Mitchell, S.E.7
-
14
-
-
70450202132
-
The B73 maize genome: complexity, diversity, and dynamics.
-
10.1126/science.1178534, 19965430
-
Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, Strong C, Delehaunty K, Fronick C, Courtney B, Rock SM, Belter E, Du F, Kim K, Abbott RM, Cotton M, Levy A, Marchetto P, Ochoa K, Jackson SM, Gillam B, et al. The B73 maize genome: complexity, diversity, and dynamics. Science 2009, 326:1112-1115. 10.1126/science.1178534, 19965430.
-
(2009)
Science
, vol.326
, pp. 1112-1115
-
-
Schnable, P.S.1
Ware, D.2
Fulton, R.S.3
Stein, J.C.4
Wei, F.5
Pasternak, S.6
Liang, C.7
Zhang, J.8
Fulton, L.9
Graves, T.A.10
Minx, P.11
Reily, A.D.12
Courtney, L.13
Kruchowski, S.S.14
Tomlinson, C.15
Strong, C.16
Delehaunty, K.17
Fronick, C.18
Courtney, B.19
Rock, S.M.20
Belter, E.21
Du, F.22
Kim, K.23
Abbott, R.M.24
Cotton, M.25
Levy, A.26
Marchetto, P.27
Ochoa, K.28
Jackson, S.M.29
Gillam, B.30
more..
-
15
-
-
81055145433
-
Distribution of allele frequencies and effect sizes and their interrelationships for common genetic susceptibility variants.
-
10.1073/pnas.1114759108, 3207674, 22003128
-
Park J-H, Gail MH, Weinberg CR, Carroll RJ, Chung CC, Wang Z, Chanock SJ, Fraumeni JF, Chatterjee N. Distribution of allele frequencies and effect sizes and their interrelationships for common genetic susceptibility variants. Proc Natl Acad Sci USA 2011, 108:18026-18031. 10.1073/pnas.1114759108, 3207674, 22003128.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 18026-18031
-
-
Park, J.-H.1
Gail, M.H.2
Weinberg, C.R.3
Carroll, R.J.4
Chung, C.C.5
Wang, Z.6
Chanock, S.J.7
Fraumeni, J.F.8
Chatterjee, N.9
-
16
-
-
77950299027
-
Rare genetic variation at Zea mays crtRB1 increases beta-carotene in maize grain.
-
10.1038/ng.551, 20305664
-
Yan J, Kandianis CB, Harjes CE, Bai L, Kim E-H, Yang X, Skinner DJ, Fu Z, Mitchell S, Li Q, Fernandez MGS, Zaharieva M, Babu R, Fu Y, Palacios N, Li J, Dellapenna D, Brutnell T, Buckler ES, Warburton ML, Rocheford T. Rare genetic variation at Zea mays crtRB1 increases beta-carotene in maize grain. Nat Genet 2010, 42:322-327. 10.1038/ng.551, 20305664.
-
(2010)
Nat Genet
, vol.42
, pp. 322-327
-
-
Yan, J.1
Kandianis, C.B.2
Harjes, C.E.3
Bai, L.4
Kim, E.-H.5
Yang, X.6
Skinner, D.J.7
Fu, Z.8
Mitchell, S.9
Li, Q.10
Fernandez, M.G.S.11
Zaharieva, M.12
Babu, R.13
Fu, Y.14
Palacios, N.15
Li, J.16
Dellapenna, D.17
Brutnell, T.18
Buckler, E.S.19
Warburton, M.L.20
Rocheford, T.21
more..
-
17
-
-
84855925920
-
Rare and common variants: twenty arguments.
-
10.1038/nrg3118, 22251874
-
Gibson G. Rare and common variants: twenty arguments. Nat Rev Genet 2012, 13:135-145. 10.1038/nrg3118, 22251874.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 135-145
-
-
Gibson, G.1
-
18
-
-
68449094455
-
Genetic properties of the maize nested association mapping population.
-
10.1126/science.1174320, 19661427
-
McMullen MD, Kresovich S, Villeda HS, Bradbury P, Li H, Sun Q, Flint-Garcia S, Thornsberry J, Acharya C, Bottoms C, Brown P, Browne C, Eller M, Guill K, Harjes C, Kroon D, Lepak N, Mitchell SE, Peterson B, Pressoir G, Romero S, Oropeza Rosas M, Salvo S, Yates H, Hanson M, Jones E, Smith S, Glaubitz JC, Goodman M, Ware D, et al. Genetic properties of the maize nested association mapping population. Science 2009, 325:737-740. 10.1126/science.1174320, 19661427.
-
(2009)
Science
, vol.325
, pp. 737-740
-
-
McMullen, M.D.1
Kresovich, S.2
Villeda, H.S.3
Bradbury, P.4
Li, H.5
Sun, Q.6
Flint-Garcia, S.7
Thornsberry, J.8
Acharya, C.9
Bottoms, C.10
Brown, P.11
Browne, C.12
Eller, M.13
Guill, K.14
Harjes, C.15
Kroon, D.16
Lepak, N.17
Mitchell, S.E.18
Peterson, B.19
Pressoir, G.20
Romero, S.21
Oropeza Rosas, M.22
Salvo, S.23
Yates, H.24
Hanson, M.25
Jones, E.26
Smith, S.27
Glaubitz, J.C.28
Goodman, M.29
Ware, D.30
more..
-
19
-
-
82955201636
-
A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome.
-
10.1371/journal.pone.0028334, 3234264, 22174790
-
Ganal MW, Durstewitz G, Polley A, Bérard A, Buckler ES, Charcosset A, Clarke JD, Graner E-M, Hansen M, Joets J, Le Paslier M-C, McMullen MD, Montalent P, Rose M, Schön C-C, Sun Q, Walter H, Martin OC, Falque M. A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome. PLoS One 2011, 6:e28334. 10.1371/journal.pone.0028334, 3234264, 22174790.
-
(2011)
PLoS One
, vol.6
-
-
Ganal, M.W.1
Durstewitz, G.2
Polley, A.3
Bérard, A.4
Buckler, E.S.5
Charcosset, A.6
Clarke, J.D.7
Graner, E.-M.8
Hansen, M.9
Joets, J.10
Le Paslier, M.-C.11
McMullen, M.D.12
Montalent, P.13
Rose, M.14
Schön, C.-C.15
Sun, Q.16
Walter, H.17
Martin, O.C.18
Falque, M.19
-
21
-
-
33646448550
-
Evolution of North American Dent Corn from Public to Proprietary Germplasm.
-
Mikel MA, Dudley JW. Evolution of North American Dent Corn from Public to Proprietary Germplasm. Crop Sci 2006, 46:1193-1205.
-
(2006)
Crop Sci
, vol.46
, pp. 1193-1205
-
-
Mikel, M.A.1
Dudley, J.W.2
-
23
-
-
70450204614
-
A first-generation haplotype map of maize.
-
10.1126/science.1177837, 19965431
-
Gore MA, Chia J-M, Elshire RJ, Sun Q, Ersoz ES, Hurwitz BL, Peiffer JA, McMullen MD, Grills GS, Ross-Ibarra J, Ware DH, Buckler ES. A first-generation haplotype map of maize. Science 2009, 326:1115-1117. 10.1126/science.1177837, 19965431.
-
(2009)
Science
, vol.326
, pp. 1115-1117
-
-
Gore, M.A.1
Chia, J.-M.2
Elshire, R.J.3
Sun, Q.4
Ersoz, E.S.5
Hurwitz, B.L.6
Peiffer, J.A.7
McMullen, M.D.8
Grills, G.S.9
Ross-Ibarra, J.10
Ware, D.H.11
Buckler, E.S.12
-
24
-
-
78049338441
-
Genome-wide patterns of genetic variation among elite maize inbred lines.
-
10.1038/ng.684, 20972441
-
Lai J, Li R, Xu X, Jin W, Xu M, Zhao H, Xiang Z, Song W, Ying K, Zhang M, Jiao Y, Ni P, Zhang J, Li D, Guo X, Ye K, Jian M, Wang B, Zheng H, Liang H, Zhang X, Wang S, Chen S, Li J, Fu Y, Springer NM, Yang H, Wang J, Dai J, Schnable PS, et al. Genome-wide patterns of genetic variation among elite maize inbred lines. Nat Genet 2010, 42:1027-1030. 10.1038/ng.684, 20972441.
-
(2010)
Nat Genet
, vol.42
, pp. 1027-1030
-
-
Lai, J.1
Li, R.2
Xu, X.3
Jin, W.4
Xu, M.5
Zhao, H.6
Xiang, Z.7
Song, W.8
Ying, K.9
Zhang, M.10
Jiao, Y.11
Ni, P.12
Zhang, J.13
Li, D.14
Guo, X.15
Ye, K.16
Jian, M.17
Wang, B.18
Zheng, H.19
Liang, H.20
Zhang, X.21
Wang, S.22
Chen, S.23
Li, J.24
Fu, Y.25
Springer, N.M.26
Yang, H.27
Wang, J.28
Dai, J.29
Schnable, P.S.30
more..
-
25
-
-
84862993359
-
Comparative population genomics of maize domestication and improvement.
-
10.1038/ng.2309, 22660546
-
Hufford MB, Xu X, Van Heerwaarden J, Pyhäjärvi T, Chia J-M, Cartwright RA, Elshire RJ, Glaubitz JC, Guill KE, Kaeppler SM, Lai J, Morrell PL, Shannon LM, Song C, Springer NM, Swanson-Wagner RA, Tiffin P, Wang J, Zhang G, Doebley J, McMullen MD, Ware D, Buckler ES, Yang S, Ross-Ibarra J. Comparative population genomics of maize domestication and improvement. Nat Genet 2012, 44:808-811. 10.1038/ng.2309, 22660546.
-
(2012)
Nat Genet
, vol.44
, pp. 808-811
-
-
Hufford, M.B.1
Xu, X.2
Van Heerwaarden, J.3
Pyhäjärvi, T.4
Chia, J.-M.5
Cartwright, R.A.6
Elshire, R.J.7
Glaubitz, J.C.8
Guill, K.E.9
Kaeppler, S.M.10
Lai, J.11
Morrell, P.L.12
Shannon, L.M.13
Song, C.14
Springer, N.M.15
Swanson-Wagner, R.A.16
Tiffin, P.17
Wang, J.18
Zhang, G.19
Doebley, J.20
McMullen, M.D.21
Ware, D.22
Buckler, E.S.23
Yang, S.24
Ross-Ibarra, J.25
more..
-
26
-
-
84863955846
-
ZmCCT and the genetic basis of day-length adaptation underlying the postdomestication spread of maize.
-
10.1073/pnas.1203189109, 3396540, 22711828
-
Hung H-Y, Shannon LM, Tian F, Bradbury PJ, Chen C, Flint-Garcia SA, McMullen MD, Ware D, Buckler ES, Doebley JF, Holland JB. ZmCCT and the genetic basis of day-length adaptation underlying the postdomestication spread of maize. Proc Natl Acad Sci USA 2012, 109:E1913-E1921. 10.1073/pnas.1203189109, 3396540, 22711828.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
-
-
Hung, H.-Y.1
Shannon, L.M.2
Tian, F.3
Bradbury, P.J.4
Chen, C.5
Flint-Garcia, S.A.6
McMullen, M.D.7
Ware, D.8
Buckler, E.S.9
Doebley, J.F.10
Holland, J.B.11
-
27
-
-
0001672954
-
Cloning of the y1 locus of maize, a gene involved in the biosynthesis of carotenoids.
-
159937, 12354969
-
Buckner B, Kelson TL, Robertson DS. Cloning of the y1 locus of maize, a gene involved in the biosynthesis of carotenoids. Plant Cell 1990, 2:867-876. 159937, 12354969.
-
(1990)
Plant Cell
, vol.2
, pp. 867-876
-
-
Buckner, B.1
Kelson, T.L.2
Robertson, D.S.3
-
28
-
-
0036791005
-
Genetic diversity and selection in the maize starch pathway.
-
10.1073/pnas.202476999, 130568, 12244216
-
Whitt SR, Wilson LM, Tenaillon MI, Gaut BS, Buckler ES. Genetic diversity and selection in the maize starch pathway. Proc Natl Acad Sci USA 2002, 99:12959-12962. 10.1073/pnas.202476999, 130568, 12244216.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 12959-12962
-
-
Whitt, S.R.1
Wilson, L.M.2
Tenaillon, M.I.3
Gaut, B.S.4
Buckler, E.S.5
-
29
-
-
0029278930
-
Characterization of the maize gene sugary1, a determinant of starch composition in kernels.
-
160793, 7773016
-
James MG, Robertson DS, Myers AM. Characterization of the maize gene sugary1, a determinant of starch composition in kernels. Plant Cell 1995, 7:417-429. 160793, 7773016.
-
(1995)
Plant Cell
, vol.7
, pp. 417-429
-
-
James, M.G.1
Robertson, D.S.2
Myers, A.M.3
-
30
-
-
34547398400
-
Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maize.
-
10.1073/pnas.0704145104, 2040906, 17595297
-
Salvi S, Sponza G, Morgante M, Tomes D, Niu X, Fengler KA, Meeley R, Ananiev E, Svitashev S, Bruggemann E, Li B, Hainey CF, Radovic S, Zaina G, Rafalski J, Tingey S V, Miao G, Phillips RL, Tuberosa R. Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maize. Proc Natl Acad Sci USA 2007, 104:11376-11381. 10.1073/pnas.0704145104, 2040906, 17595297.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 11376-11381
-
-
Salvi, S.1
Sponza, G.2
Morgante, M.3
Tomes, D.4
Niu, X.5
Fengler, K.A.6
Meeley, R.7
Ananiev, E.8
Svitashev, S.9
Bruggemann, E.10
Li, B.11
Hainey, C.F.12
Radovic, S.13
Zaina, G.14
Rafalski, J.15
Tingey, S.V.16
Miao, G.17
Phillips, R.L.18
Tuberosa, R.19
-
31
-
-
68449083317
-
The genetic architecture of maize flowering time.
-
10.1126/science.1174276, 19661422
-
Buckler ES, Holland JB, Bradbury PJ, Acharya CB, Brown PJ, Browne C, Ersoz E, Flint-Garcia S, Garcia A, Glaubitz JC, Goodman MM, Harjes C, Guill K, Kroon DE, Larsson SJ, Lepak NK, Li H, Mitchell SE, Pressoir G, Peiffer JA, Oropeza Rosas M, Rocheford TR, Romay MC, Romero S, Salvo S, Sanchez Villeda H, Da Silva HS, Sun Q, Tian F, Upadyayula N, et al. The genetic architecture of maize flowering time. Science 2009, 325:714-718. 10.1126/science.1174276, 19661422.
-
(2009)
Science
, vol.325
, pp. 714-718
-
-
Buckler, E.S.1
Holland, J.B.2
Bradbury, P.J.3
Acharya, C.B.4
Brown, P.J.5
Browne, C.6
Ersoz, E.7
Flint-Garcia, S.8
Garcia, A.9
Glaubitz, J.C.10
Goodman, M.M.11
Harjes, C.12
Guill, K.13
Kroon, D.E.14
Larsson, S.J.15
Lepak, N.K.16
Li, H.17
Mitchell, S.E.18
Pressoir, G.19
Peiffer, J.A.20
Oropeza Rosas, M.21
Rocheford, T.R.22
Romay, M.C.23
Romero, S.24
Salvo, S.25
Sanchez Villeda, H.26
Da Silva, H.S.27
Sun, Q.28
Tian, F.29
Upadyayula, N.30
more..
-
32
-
-
33845661508
-
Delayed flowering1 encodes a basic leucine zipper protein that mediates floral inductive signals at the shoot apex in maize.
-
10.1104/pp.106.088815, 1676038, 17071646
-
Muszynski MG, Dam T, Li B, Shirbroun DM, Hou Z, Bruggemann E, Archibald R, Ananiev E V, Danilevskaya ON. Delayed flowering1 encodes a basic leucine zipper protein that mediates floral inductive signals at the shoot apex in maize. Plant Physiol 2006, 142:1523-1536. 10.1104/pp.106.088815, 1676038, 17071646.
-
(2006)
Plant Physiol
, vol.142
, pp. 1523-1536
-
-
Muszynski, M.G.1
Dam, T.2
Li, B.3
Shirbroun, D.M.4
Hou, Z.5
Bruggemann, E.6
Archibald, R.7
Ananiev, E.V.8
Danilevskaya, O.N.9
-
33
-
-
0034644643
-
Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time.
-
10.1126/science.290.5490.344, 11030654
-
Johanson U, West J, Lister C, Michaels S, Amasino R, Dean C. Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time. Science 2000, 290:344-347. 10.1126/science.290.5490.344, 11030654.
-
(2000)
Science
, vol.290
, pp. 344-347
-
-
Johanson, U.1
West, J.2
Lister, C.3
Michaels, S.4
Amasino, R.5
Dean, C.6
-
34
-
-
3843145136
-
Structure and expression of maize phytochrome family homeologs.
-
10.1534/genetics.103.026096, 1470959, 15280251
-
Sheehan MJ, Farmer PR, Brutnell TP. Structure and expression of maize phytochrome family homeologs. Genetics 2004, 167:1395-1405. 10.1534/genetics.103.026096, 1470959, 15280251.
-
(2004)
Genetics
, vol.167
, pp. 1395-1405
-
-
Sheehan, M.J.1
Farmer, P.R.2
Brutnell, T.P.3
-
35
-
-
0034931677
-
Dwarf8 polymorphisms associate with variation in flowering time.
-
10.1038/90135, 11431702
-
Thornsberry JM, Goodman MM, Doebley J, Kresovich S, Nielsen D, Buckler ES. Dwarf8 polymorphisms associate with variation in flowering time. Nat Genet 2001, 28:286-289. 10.1038/90135, 11431702.
-
(2001)
Nat Genet
, vol.28
, pp. 286-289
-
-
Thornsberry, J.M.1
Goodman, M.M.2
Doebley, J.3
Kresovich, S.4
Nielsen, D.5
Buckler, E.S.6
-
36
-
-
3042595170
-
Selection versus demography: a multilocus investigation of the domestication process in maize.
-
10.1093/molbev/msh102, 15014173
-
Tenaillon MI, U'Ren J, Tenaillon O, Gaut BS. Selection versus demography: a multilocus investigation of the domestication process in maize. Mol Biol Evol 2004, 21:1214-1225. 10.1093/molbev/msh102, 15014173.
-
(2004)
Mol Biol Evol
, vol.21
, pp. 1214-1225
-
-
Tenaillon, M.I.1
U'Ren, J.2
Tenaillon, O.3
Gaut, B.S.4
-
37
-
-
84874780997
-
Lessons from Dwarf8 on the Strengths and Weaknesses of Structured Association Mapping.
-
10.1371/journal.pgen.1003246, 3578782, 23437002
-
Larsson SJ, Lipka AE, Buckler ES. Lessons from Dwarf8 on the Strengths and Weaknesses of Structured Association Mapping. PLoS Genetics 2013, 9:e1003246. 10.1371/journal.pgen.1003246, 3578782, 23437002.
-
(2013)
PLoS Genetics
, vol.9
-
-
Larsson, S.J.1
Lipka, A.E.2
Buckler, E.S.3
-
39
-
-
77949517584
-
Genetic characterization and linkage disequilibrium estimation of a global maize collection using SNP markers.
-
10.1371/journal.pone.0008451, 2795174, 20041112
-
Yan J, Shah T, Warburton ML, Buckler ES, McMullen MD, Crouch J. Genetic characterization and linkage disequilibrium estimation of a global maize collection using SNP markers. PLoS One 2009, 4:e8451. 10.1371/journal.pone.0008451, 2795174, 20041112.
-
(2009)
PLoS One
, vol.4
-
-
Yan, J.1
Shah, T.2
Warburton, M.L.3
Buckler, E.S.4
McMullen, M.D.5
Crouch, J.6
-
40
-
-
77953128783
-
Population structure and genetic diversity in a commercial maize breeding program assessed with SSR and SNP markers.
-
10.1007/s00122-009-1256-2, 2854351, 20063144
-
Van Inghelandt D, Melchinger AE, Lebreton C, Stich B. Population structure and genetic diversity in a commercial maize breeding program assessed with SSR and SNP markers. Theor Appl Genet 2010, 120:1289-1299. 10.1007/s00122-009-1256-2, 2854351, 20063144.
-
(2010)
Theor Appl Genet
, vol.120
, pp. 1289-1299
-
-
Van Inghelandt, D.1
Melchinger, A.E.2
Lebreton, C.3
Stich, B.4
-
41
-
-
80052824966
-
Comparative SNP and haplotype analysis reveals a higher genetic diversity and rapider LD decay in tropical than temperate germplasm in maize.
-
10.1371/journal.pone.0024861, 3174237, 21949770
-
Lu Y, Shah T, Hao Z, Taba S, Zhang S, Gao S, Liu J, Cao M, Wang J, Prakash AB, Rong T, Xu Y. Comparative SNP and haplotype analysis reveals a higher genetic diversity and rapider LD decay in tropical than temperate germplasm in maize. PLoS One 2011, 6:e24861. 10.1371/journal.pone.0024861, 3174237, 21949770.
-
(2011)
PLoS One
, vol.6
-
-
Lu, Y.1
Shah, T.2
Hao, Z.3
Taba, S.4
Zhang, S.5
Gao, S.6
Liu, J.7
Cao, M.8
Wang, J.9
Prakash, A.B.10
Rong, T.11
Xu, Y.12
-
42
-
-
84864526930
-
Historical genomics of North American maize.
-
10.1073/pnas.1209275109, 3412004, 22802642
-
Van Heerwaarden J, Hufford MB, Ross-Ibarra J. Historical genomics of North American maize. Proc Natl Acad Sci USA 2012, 109:12420-12425. 10.1073/pnas.1209275109, 3412004, 22802642.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 12420-12425
-
-
Van Heerwaarden, J.1
Hufford, M.B.2
Ross-Ibarra, J.3
-
43
-
-
73649121258
-
Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content.
-
10.1371/journal.pgen.1000734, 2780416, 19956538
-
Springer NM, Ying K, Fu Y, Ji T, Yeh C-T, Jia Y, Wu W, Richmond T, Kitzman J, Rosenbaum H, Iniguez AL, Barbazuk WB, Jeddeloh JA, Nettleton D, Schnable PS. Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content. PLoS Genet 2009, 5:e1000734. 10.1371/journal.pgen.1000734, 2780416, 19956538.
-
(2009)
PLoS Genet
, vol.5
-
-
Springer, N.M.1
Ying, K.2
Fu, Y.3
Ji, T.4
Yeh, C.-T.5
Jia, Y.6
Wu, W.7
Richmond, T.8
Kitzman, J.9
Rosenbaum, H.10
Iniguez, A.L.11
Barbazuk, W.B.12
Jeddeloh, J.A.13
Nettleton, D.14
Schnable, P.S.15
-
44
-
-
84873505245
-
Switchgrass genomic diversity, ploidy and evolution: novel insights from a network-based SNP discovery protocol.
-
10.1371/journal.pgen.1003215, 3547862, 23349638
-
Lu F, Lipka A, Elshire R, Glaubitz J, Cherney J, Casler M, Buckler E, Costich D. Switchgrass genomic diversity, ploidy and evolution: novel insights from a network-based SNP discovery protocol. PLoS Genet 2013, 9:e1003215. 10.1371/journal.pgen.1003215, 3547862, 23349638.
-
(2013)
PLoS Genet
, vol.9
-
-
Lu, F.1
Lipka, A.2
Elshire, R.3
Glaubitz, J.4
Cherney, J.5
Casler, M.6
Buckler, E.7
Costich, D.8
-
45
-
-
27544474337
-
Ascertainment bias in studies of human genome-wide polymorphism.
-
10.1101/gr.4107905, 1310637, 16251459
-
Clark AG, Hubisz MJ, Bustamante CD, Williamson SH, Nielsen R. Ascertainment bias in studies of human genome-wide polymorphism. Genome Res 2005, 15:1496-1502. 10.1101/gr.4107905, 1310637, 16251459.
-
(2005)
Genome Res
, vol.15
, pp. 1496-1502
-
-
Clark, A.G.1
Hubisz, M.J.2
Bustamante, C.D.3
Williamson, S.H.4
Nielsen, R.5
-
46
-
-
79961091828
-
Demographic history and rare allele sharing among human populations.
-
10.1073/pnas.1019276108, 3142009, 21730125
-
Gravel S, Henn BM, Gutenkunst RN, Indap AR, Marth GT, Clark AG, Yu F, Gibbs RA, Bustamante CD, Altshuler DL, Durbin RM, Abecasis GR, Bentley DR, Chakravarti A, Collins FS, De La Vega FM, Donnelly P, Egholm M, Flicek P, Gabriel SB, Knoppers BM, Lander ES, Lehrach H, Mardis ER, McVean GA, Nickerson DA, Peltonen L, Schafer AJ, Sherry ST, Wang J, et al. Demographic history and rare allele sharing among human populations. Proc Natl Acad Sci USA 2011, 108:11983-11988. 10.1073/pnas.1019276108, 3142009, 21730125.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 11983-11988
-
-
Gravel, S.1
Henn, B.M.2
Gutenkunst, R.N.3
Indap, A.R.4
Marth, G.T.5
Clark, A.G.6
Yu, F.7
Gibbs, R.A.8
Bustamante, C.D.9
Altshuler, D.L.10
Durbin, R.M.11
Abecasis, G.R.12
Bentley, D.R.13
Chakravarti, A.14
Collins, F.S.15
De La Vega, F.M.16
Donnelly, P.17
Egholm, M.18
Flicek, P.19
Gabriel, S.B.20
Knoppers, B.M.21
Lander, E.S.22
Lehrach, H.23
Mardis, E.R.24
McVean, G.A.25
Nickerson, D.A.26
Peltonen, L.27
Schafer, A.J.28
Sherry, S.T.29
Wang, J.30
more..
-
48
-
-
54949106977
-
Molecular characterization of maize inbreds with expired U.S. plant variety protection.
-
Nelson PT, Coles ND, Holland JB, Bubeck DM, Smith S, Goodman MM. Molecular characterization of maize inbreds with expired U.S. plant variety protection. Crop Sci 2008, 48:1673-1686.
-
(2008)
Crop Sci
, vol.48
, pp. 1673-1686
-
-
Nelson, P.T.1
Coles, N.D.2
Holland, J.B.3
Bubeck, D.M.4
Smith, S.5
Goodman, M.M.6
-
49
-
-
79952483763
-
Genetic composition of contemporary U.S. commercial dent corn germplasm.
-
Mikel MA. Genetic composition of contemporary U.S. commercial dent corn germplasm. Crop Sci 2011, 51:592-599.
-
(2011)
Crop Sci
, vol.51
, pp. 592-599
-
-
Mikel, M.A.1
-
50
-
-
85101891316
-
Broadening the genetic diversity in maize breeding by use of exotic germplasm.
-
Coors JG, Pandey S Madison: ASA, CSSA
-
Goodman MM. Broadening the genetic diversity in maize breeding by use of exotic germplasm. The Genetics and Exploitation of Heterosis in Crops 1999, 139-148. Coors JG, Pandey S Madison: ASA, CSSA.
-
(1999)
The Genetics and Exploitation of Heterosis in Crops
, pp. 139-148
-
-
Goodman, M.M.1
-
51
-
-
33746466609
-
Latin American Maize Project (LAMP) and Germplasm Enhancement of Maize (GEM) project: generating useful breeding germplasm 1.
-
Salhuana W, Pollak L. Latin American Maize Project (LAMP) and Germplasm Enhancement of Maize (GEM) project: generating useful breeding germplasm 1. Maydica 2006, 51:339-355.
-
(2006)
Maydica
, vol.51
, pp. 339-355
-
-
Salhuana, W.1
Pollak, L.2
-
52
-
-
79958163084
-
Extent and genome-wide distribution of linkage disequilibrium in commercial maize germplasm.
-
10.1007/s00122-011-1562-3, 21404061
-
Van Inghelandt D, Reif JC, Dhillon BS, Flament P, Melchinger AE. Extent and genome-wide distribution of linkage disequilibrium in commercial maize germplasm. Theor Appl Genet 2011, 123:11-20. 10.1007/s00122-011-1562-3, 21404061.
-
(2011)
Theor Appl Genet
, vol.123
, pp. 11-20
-
-
Van Inghelandt, D.1
Reif, J.C.2
Dhillon, B.S.3
Flament, P.4
Melchinger, A.E.5
-
53
-
-
77953233453
-
Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines.
-
10.1038/nature08800, 3023908, 20336072
-
Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, De Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JDG, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, et al. Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature 2010, 465:627-631. 10.1038/nature08800, 3023908, 20336072.
-
(2010)
Nature
, vol.465
, pp. 627-631
-
-
Atwell, S.1
Huang, Y.S.2
Vilhjálmsson, B.J.3
Willems, G.4
Horton, M.5
Li, Y.6
Meng, D.7
Platt, A.8
Tarone, A.M.9
Hu, T.T.10
Jiang, R.11
Muliyati, N.W.12
Zhang, X.13
Amer, M.A.14
Baxter, I.15
Brachi, B.16
Chory, J.17
Dean, C.18
Debieu, M.19
De Meaux, J.20
Ecker, J.R.21
Faure, N.22
Kniskern, J.M.23
Jones, J.D.G.24
Michael, T.25
Nemri, A.26
Roux, F.27
Salt, D.E.28
Tang, C.29
Todesco, M.30
more..
-
54
-
-
80053388300
-
Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa.
-
3195253, 21915109
-
Zhao K, Tung C-W, Eizenga GC, Wright MH, Ali ML, Price AH, Norton GJ, Islam MR, Reynolds A, Mezey J, McClung AM, Bustamante CD, McCouch SR. Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa. Nat Commun 2011, 2:467. 3195253, 21915109.
-
(2011)
Nat Commun
, vol.2
, pp. 467
-
-
Zhao, K.1
Tung, C.-W.2
Eizenga, G.C.3
Wright, M.H.4
Ali, M.L.5
Price, A.H.6
Norton, G.J.7
Islam, M.R.8
Reynolds, A.9
Mezey, J.10
McClung, A.M.11
Bustamante, C.D.12
McCouch, S.R.13
-
55
-
-
84859585404
-
Flowering time in maize: linkage and epistasis at a major effect locus.
-
10.1534/genetics.111.136903, 3316663, 22298708
-
Durand E, Bouchet S, Bertin P, Ressayre A, Jamin P, Charcosset A, Dillmann C, Tenaillon MI. Flowering time in maize: linkage and epistasis at a major effect locus. Genetics 2012, 190:1547-1562. 10.1534/genetics.111.136903, 3316663, 22298708.
-
(2012)
Genetics
, vol.190
, pp. 1547-1562
-
-
Durand, E.1
Bouchet, S.2
Bertin, P.3
Ressayre, A.4
Jamin, P.5
Charcosset, A.6
Dillmann, C.7
Tenaillon, M.I.8
-
56
-
-
79955609230
-
The FT-like ZCN8 Gene Functions as a Floral Activator and Is Involved in Photoperiod Sensitivity in Maize.
-
10.1105/tpc.110.081406, 3082274, 21441432
-
Meng X, Muszynski MG, Danilevskaya ON. The FT-like ZCN8 Gene Functions as a Floral Activator and Is Involved in Photoperiod Sensitivity in Maize. The Plant cell 2011, 23:942-960. 10.1105/tpc.110.081406, 3082274, 21441432.
-
(2011)
The Plant cell
, vol.23
, pp. 942-960
-
-
Meng, X.1
Muszynski, M.G.2
Danilevskaya, O.N.3
-
57
-
-
78650044769
-
Genetic diversity of a maize association population with restricted phenology.
-
Hansey CN, Johnson JM, Sekhon RS, Kaeppler SM, De Leon N. Genetic diversity of a maize association population with restricted phenology. Crop Sci 2011, 51:704-715.
-
(2011)
Crop Sci
, vol.51
, pp. 704-715
-
-
Hansey, C.N.1
Johnson, J.M.2
Sekhon, R.S.3
Kaeppler, S.M.4
De Leon, N.5
-
58
-
-
35748946021
-
TASSEL: software for association mapping of complex traits in diverse samples.
-
10.1093/bioinformatics/btm308, 17586829
-
Bradbury PJ, Zhang Z, Kroon DE, Casstevens TM, Ramdoss Y, Buckler ES. TASSEL: software for association mapping of complex traits in diverse samples. Bioinformatics 2007, 23:2633-2635. 10.1093/bioinformatics/btm308, 17586829.
-
(2007)
Bioinformatics
, vol.23
, pp. 2633-2635
-
-
Bradbury, P.J.1
Zhang, Z.2
Kroon, D.E.3
Casstevens, T.M.4
Ramdoss, Y.5
Buckler, E.S.6
-
59
-
-
84885876009
-
Panzea.
-
Panzea, http://www.panzea.org
-
-
-
-
60
-
-
34548292504
-
PLINK: a toolset for whole-genome association and population-based linkage analysis.
-
10.1086/519795, 1950838, 17701901
-
Purcell S, Neale B, Todd-Brown K, Thomas L, Ferreira MAR, Bender D, Maller J, Sklar P, De Bakker PIW, Daly MJ, Sham PC. PLINK: a toolset for whole-genome association and population-based linkage analysis. Am J Hum Genet 2007, 81:559-575. 10.1086/519795, 1950838, 17701901.
-
(2007)
Am J Hum Genet
, vol.81
, pp. 559-575
-
-
Purcell, S.1
Neale, B.2
Todd-Brown, K.3
Thomas, L.4
Ferreira, M.A.R.5
Bender, D.6
Maller, J.7
Sklar, P.8
De Bakker, P.I.W.9
Daly, M.J.10
Sham, P.C.11
-
61
-
-
85166916238
-
Gephi: an open source software for exploring and manipulating networks.
-
Bastian M, Heymann S, Jacomy M. Gephi: an open source software for exploring and manipulating networks. AJS 2009, 2:361-362.
-
(2009)
AJS
, vol.2
, pp. 361-362
-
-
Bastian, M.1
Heymann, S.2
Jacomy, M.3
-
63
-
-
0021566877
-
Estimating F-Statistics for the analysis of population structure.
-
Weir BS, Cockerham CC. Estimating F-Statistics for the analysis of population structure. Evolution 1984, 38:1358-1370.
-
(1984)
Evolution
, vol.38
, pp. 1358-1370
-
-
Weir, B.S.1
Cockerham, C.C.2
-
65
-
-
84866467273
-
GAPIT: Genome Association and Prediction Integrated Tool.
-
10.1093/bioinformatics/bts444, 22796960
-
Lipka AE, Tian F, Wang Q, Peiffer J, Li M, Bradbury PJ, Gore MA, Buckler ES, Zhang Z. GAPIT: Genome Association and Prediction Integrated Tool. Bioinformatics 2012, 28:2397-2399. 10.1093/bioinformatics/bts444, 22796960.
-
(2012)
Bioinformatics
, vol.28
, pp. 2397-2399
-
-
Lipka, A.E.1
Tian, F.2
Wang, Q.3
Peiffer, J.4
Li, M.5
Bradbury, P.J.6
Gore, M.A.7
Buckler, E.S.8
Zhang, Z.9
-
66
-
-
77950299137
-
Mixed linear model approach adapted for genome-wide association studies.
-
10.1038/ng.546, 2931336, 20208535
-
Zhang Z, Ersoz E, Lai C-Q, Todhunter RJ, Tiwari HK, Gore MA, Bradbury PJ, Yu J, Arnett DK, Ordovas JM, Buckler ES. Mixed linear model approach adapted for genome-wide association studies. Nat Genet 2010, 42:355-360. 10.1038/ng.546, 2931336, 20208535.
-
(2010)
Nat Genet
, vol.42
, pp. 355-360
-
-
Zhang, Z.1
Ersoz, E.2
Lai, C.-Q.3
Todhunter, R.J.4
Tiwari, H.K.5
Gore, M.A.6
Bradbury, P.J.7
Yu, J.8
Arnett, D.K.9
Ordovas, J.M.10
Buckler, E.S.11
-
67
-
-
55849133422
-
Efficient methods to compute genomic predictions.
-
10.3168/jds.2007-0980, 18946147
-
VanRaden P. Efficient methods to compute genomic predictions. J Dairy Sci 2008, 91:4414-4423. 10.3168/jds.2007-0980, 18946147.
-
(2008)
J Dairy Sci
, vol.91
, pp. 4414-4423
-
-
VanRaden, P.1
|