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Volumn 9, Issue MAY, 2018, Pages

Dysbiosis and ecotypes of the salivary microbiome associated with inflammatory bowel diseases and the assistance in diagnosis of diseases using oral bacterial profiles

Author keywords

16S rRNA gene; Clusters; Dysbiosis; Indicator species analysis; Inflammatory bowel diseases; Microbiome; Saliva

Indexed keywords

GENOMIC DNA; RNA 16S;

EID: 85047820170     PISSN: None     EISSN: 1664302X     Source Type: Journal    
DOI: 10.3389/fmicb.2018.01136     Document Type: Article
Times cited : (99)

References (65)
  • 1
    • 84860433112 scopus 로고    scopus 로고
    • Periodontal disease, Porphyromonas gingivalis serum antibody levels and orodigestive cancer mortality
    • Ahn, J., Segers, S., and Hayes, R. B. (2012). Periodontal disease, Porphyromonas gingivalis serum antibody levels and orodigestive cancer mortality. Carcinogenesis 33, 1055-1058. doi: 10.1093/carcin/bgs112
    • (2012) Carcinogenesis , vol.33 , pp. 1055-1058
    • Ahn, J.1    Segers, S.2    Hayes, R.B.3
  • 2
    • 85032492045 scopus 로고    scopus 로고
    • Ectopic colonization of oral bacteria in the intestine drives TH1 cell induction and inflammation
    • Atarashi, K., Suda, W., Luo, C., Kawaguchi, T., Motoo, I., Narushima, S., et al. (2017). Ectopic colonization of oral bacteria in the intestine drives TH1 cell induction and inflammation. Science 358, 359-365. doi: 10.1126/science.aan4526
    • (2017) Science , vol.358 , pp. 359-365
    • Atarashi, K.1    Suda, W.2    Luo, C.3    Kawaguchi, T.4    Motoo, I.5    Narushima, S.6
  • 3
    • 84858709310 scopus 로고    scopus 로고
    • Freezing fecal samples prior to DNA extraction affects the Firmicutes to Bacteroidetes ratio determined by downstream quantitative PCR analysis
    • Bahl, M. I., Bergstrom, A., and Licht, T. R. (2012). Freezing fecal samples prior to DNA extraction affects the Firmicutes to Bacteroidetes ratio determined by downstream quantitative PCR analysis. FEMS Microbiol. Lett. 329, 193-197. doi: 10.1111/j.1574-6968.2012.02523.x
    • (2012) FEMS Microbiol. Lett , vol.329 , pp. 193-197
    • Bahl, M.I.1    Bergstrom, A.2    Licht, T.R.3
  • 4
    • 84891559995 scopus 로고    scopus 로고
    • Genetic variation of Helicobacter pylori in the oral cavity and stomach detected using thymine adenine cloning in children with chronic gastritis
    • Cai, H., Li, W., Shu, X., Peng, K., Zhang, Y., and Jiang, M. (2014). Genetic variation of Helicobacter pylori in the oral cavity and stomach detected using thymine adenine cloning in children with chronic gastritis. Pediatr. Infect. Dis. J. 33, e1-e6. doi: 10.1097/inf.0000000000000017
    • (2014) Pediatr. Infect. Dis. J , vol.33 , pp. e1-e6
    • Cai, H.1    Li, W.2    Shu, X.3    Peng, K.4    Zhang, Y.5    Jiang, M.6
  • 5
    • 85032505761 scopus 로고    scopus 로고
    • Intestinal inflammation induced by oral bacteria
    • Cao, X. (2017). Intestinal inflammation induced by oral bacteria. Science 358, 308-309. doi: 10.1126/science.aap9298
    • (2017) Science , vol.358 , pp. 308-309
    • Cao, X.1
  • 7
    • 84946888159 scopus 로고    scopus 로고
    • Dual role of Helicobacter and Campylobacter species in IBD: a systematic review and meta-analysis
    • Castano-Rodriguez, N., Kaakoush, N. O., Lee, W. S., and Mitchell, H. M. (2017). Dual role of Helicobacter and Campylobacter species in IBD: a systematic review and meta-analysis. Gut 66, 235-249. doi: 10.1136/gutjnl-2015-310545
    • (2017) Gut , vol.66 , pp. 235-249
    • Castano-Rodriguez, N.1    Kaakoush, N.O.2    Lee, W.S.3    Mitchell, H.M.4
  • 8
    • 38449101120 scopus 로고    scopus 로고
    • Integration of biological networks and gene expression data using Cytoscape
    • Cline, M. S., Smoot, M., Cerami, E., Kuchinsky, A., Landys, N., Workman, C., et al. (2007). Integration of biological networks and gene expression data using Cytoscape. Nat. Protoc. 2, 2366-2382. doi: 10.1038/nprot.2007.324
    • (2007) Nat. Protoc , vol.2 , pp. 2366-2382
    • Cline, M.S.1    Smoot, M.2    Cerami, E.3    Kuchinsky, A.4    Landys, N.5    Workman, C.6
  • 9
    • 72949091232 scopus 로고    scopus 로고
    • Bacterial community variation in human body habitats across space and time
    • Costello, E. K., Lauber, C. L., Hamady, M., Fierer, N., Gordon, J. I., and Knight, R. (2009). Bacterial community variation in human body habitats across space and time. Science 326, 1694-1697. doi: 10.1126/science.1177486
    • (2009) Science , vol.326 , pp. 1694-1697
    • Costello, E.K.1    Lauber, C.L.2    Hamady, M.3    Fierer, N.4    Gordon, J.I.5    Knight, R.6
  • 10
    • 77956631921 scopus 로고    scopus 로고
    • Improving indicator species analysis by combining groups of sites
    • De Caceres, M., Legendre, P., and Moretti, M. (2010). Improving indicator species analysis by combining groups of sites. Oikos 119, 1674-1684. doi: 10.1111/j.1600-0706.2010.18334.x
    • (2010) Oikos , vol.119 , pp. 1674-1684
    • De Caceres, M.1    Legendre, P.2    Moretti, M.3
  • 11
    • 33746061683 scopus 로고    scopus 로고
    • Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
    • DeSantis, T. Z., Hugenholtz, P., Larsen, N., Rojas, M., Brodie, E. L., Keller, K., et al. (2006). Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl. Environ. Microbiol. 72, 5069-5072. doi: 10.1128/aem.03006-05
    • (2006) Appl. Environ. Microbiol , vol.72 , pp. 5069-5072
    • DeSantis, T.Z.1    Hugenholtz, P.2    Larsen, N.3    Rojas, M.4    Brodie, E.L.5    Keller, K.6
  • 13
    • 84859789740 scopus 로고    scopus 로고
    • Alterations in diversity of the oral microbiome in pediatric inflammatory bowel disease
    • Docktor, M. J., Paster, B. J., Abramowicz, S., Ingram, J., Wang, Y. E., Correll, M., et al. (2012). Alterations in diversity of the oral microbiome in pediatric inflammatory bowel disease. Inflamm. Bowel Dis. 18, 935-942. doi: 10.1002/ibd.21874
    • (2012) Inflamm. Bowel Dis , vol.18 , pp. 935-942
    • Docktor, M.J.1    Paster, B.J.2    Abramowicz, S.3    Ingram, J.4    Wang, Y.E.5    Correll, M.6
  • 15
    • 84978286049 scopus 로고    scopus 로고
    • 16S rRNA gene sequencing of mock microbial populations-impact of DNA extraction method, primer choice and sequencing platform
    • Fouhy, F., Clooney, A. G., Stanton, C., Claesson, M. J., and Cotter, P. D. (2016). 16S rRNA gene sequencing of mock microbial populations-impact of DNA extraction method, primer choice and sequencing platform. BMC Microbiol. 16:123. doi: 10.1186/s12866-016-0738-z
    • (2016) BMC Microbiol , vol.16 , pp. 123
    • Fouhy, F.1    Clooney, A.G.2    Stanton, C.3    Claesson, M.J.4    Cotter, P.D.5
  • 16
    • 35348857386 scopus 로고    scopus 로고
    • Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
    • Frank, D. N., St Amand, A. L., Feldman, R. A., Boedeker, E. C., Harpaz, N., and Pace, N. R. (2007). Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proc. Natl. Acad. Sci. U.S.A. 104, 13780-13785. doi: 10.1073/pnas.0706625104
    • (2007) Proc. Natl. Acad. Sci. U.S.A , vol.104 , pp. 13780-13785
    • Frank, D.N.1    St Amand, A.L.2    Feldman, R.A.3    Boedeker, E.C.4    Harpaz, N.5    Pace, N.R.6
  • 18
    • 33750956239 scopus 로고    scopus 로고
    • Differences between tissue-associated intestinal microfloras of patients with Crohn's disease and ulcerative colitis
    • Gophna, U., Sommerfeld, K., Gophna, S., Doolittle, W. F., and Veldhuyzen van Zanten, S. J. (2006). Differences between tissue-associated intestinal microfloras of patients with Crohn's disease and ulcerative colitis. J. Clin. Microbiol. 44, 4136-4141. doi: 10.1128/jcm.01004-06
    • (2006) J. Clin. Microbiol , vol.44 , pp. 4136-4141
    • Gophna, U.1    Sommerfeld, K.2    Gophna, S.3    Doolittle, W.F.4    Veldhuyzen van Zanten, S.J.5
  • 19
    • 79952067373 scopus 로고    scopus 로고
    • Oral health and adverse pregnancy outcomes-what's next?
    • Han, Y. W. (2011). Oral health and adverse pregnancy outcomes-what's next? J. Dent. Res. 90, 289-293. doi: 10.1177/0022034510381905
    • (2011) J. Dent. Res , vol.90 , pp. 289-293
    • Han, Y.W.1
  • 20
    • 0034007897 scopus 로고    scopus 로고
    • Increased salivary acetaldehyde levels in heavy drinkers and smokers: a microbiological approach to oral cavity cancer
    • Homann, N., Tillonen, J., Meurman, J. H., Rintamaki, H., Lindqvist, C., Rautio, M., et al. (2000). Increased salivary acetaldehyde levels in heavy drinkers and smokers: a microbiological approach to oral cavity cancer. Carcinogenesis 21, 663-668. doi: 10.1093/carcin/21.4.663
    • (2000) Carcinogenesis , vol.21 , pp. 663-668
    • Homann, N.1    Tillonen, J.2    Meurman, J.H.3    Rintamaki, H.4    Lindqvist, C.5    Rautio, M.6
  • 21
    • 84906942512 scopus 로고    scopus 로고
    • Predictive modeling of gingivitis severity and susceptibility via oral microbiota
    • Huang, S., Li, R., Zeng, X., He, T., Zhao, H., Chang, A., et al. (2014). Predictive modeling of gingivitis severity and susceptibility via oral microbiota. ISME J. 8, 1768-1780. doi: 10.1038/ismej.2014.32
    • (2014) ISME J , vol.8 , pp. 1768-1780
    • Huang, S.1    Li, R.2    Zeng, X.3    He, T.4    Zhao, H.5    Chang, A.6
  • 22
    • 84862276328 scopus 로고    scopus 로고
    • Structure, function and diversity of the healthy human microbiome
    • Huttenhower, C., Gevers, D., Knight, R., Abubucker, S., Badger, J. H., Chinwalla, A. T., et al. (2012). Structure, function and diversity of the healthy human microbiome. Nature 486, 207-214. doi: 10.1038/nature11234
    • (2012) Nature , vol.486 , pp. 207-214
    • Huttenhower, C.1    Gevers, D.2    Knight, R.3    Abubucker, S.4    Badger, J.H.5    Chinwalla, A.T.6
  • 24
    • 85007478309 scopus 로고    scopus 로고
    • Understanding and preventing the global increase of inflammatory bowel disease
    • Kaplan, G. G., and Ng, S. C. (2017). Understanding and preventing the global increase of inflammatory bowel disease. Gastroenterology 152, 313.e2-321.e2. doi: 10.1053/j.gastro.2016.10.020
    • (2017) Gastroenterology , vol.152 , pp. 313.e2-321.e2
    • Kaplan, G.G.1    Ng, S.C.2
  • 25
    • 77952316009 scopus 로고    scopus 로고
    • Inflammatory bowel disease
    • Kaser, A., Zeissig, S., and Blumberg, R. S. (2010). Inflammatory bowel disease. Annu. Rev. Immunol. 28, 573-621. doi: 10.1146/annurev-immunol-030409-101225
    • (2010) Annu. Rev. Immunol , vol.28 , pp. 573-621
    • Kaser, A.1    Zeissig, S.2    Blumberg, R.S.3
  • 26
    • 84948160354 scopus 로고    scopus 로고
    • Alterations of the subgingival microbiota in pediatric Crohn's disease studied longitudinally in discovery and validation cohorts
    • Kelsen, J., Bittinger, K., Pauly-Hubbard, H., Posivak, L., Grunberg, S., Baldassano, R., et al. (2015). Alterations of the subgingival microbiota in pediatric Crohn's disease studied longitudinally in discovery and validation cohorts. Inflamm. Bowel Dis. 21, 2797-2805. doi: 10.1097/mib.0000000000000557
    • (2015) Inflamm. Bowel Dis , vol.21 , pp. 2797-2805
    • Kelsen, J.1    Bittinger, K.2    Pauly-Hubbard, H.3    Posivak, L.4    Grunberg, S.5    Baldassano, R.6
  • 27
    • 84859753092 scopus 로고    scopus 로고
    • Infection of specific strains of Streptococcus mutans, oral bacteria, confers a risk of ulcerative colitis
    • Kojima, A., Nakano, K., Wada, K., Takahashi, H., Katayama, K., Yoneda, M., et al. (2012). Infection of specific strains of Streptococcus mutans, oral bacteria, confers a risk of ulcerative colitis. Sci. Rep. 2:332. doi: 10.1038/srep00332
    • (2012) Sci. Rep , vol.2 , pp. 332
    • Kojima, A.1    Nakano, K.2    Wada, K.3    Takahashi, H.4    Katayama, K.5    Yoneda, M.6
  • 28
    • 84897530070 scopus 로고    scopus 로고
    • Aggravation of inflammatory bowel diseases by oral streptococci
    • Kojima, A., Nomura, R., Naka, S., Okawa, R., Ooshima, T., and Nakano, K. (2014). Aggravation of inflammatory bowel diseases by oral streptococci. Oral Dis. 20, 359-366. doi: 10.1111/odi.12125
    • (2014) Oral Dis , vol.20 , pp. 359-366
    • Kojima, A.1    Nomura, R.2    Naka, S.3    Okawa, R.4    Ooshima, T.5    Nakano, K.6
  • 29
    • 85013173938 scopus 로고    scopus 로고
    • Rhea: a transparent and modular R pipeline for microbial profiling based on 16S rRNA gene amplicons
    • Lagkouvardos, I., Fischer, S., Kumar, N., and Clavel, T. (2017). Rhea: a transparent and modular R pipeline for microbial profiling based on 16S rRNA gene amplicons. PeerJ 5:e2836. doi: 10.7717/peerj.2836
    • (2017) PeerJ , vol.5
    • Lagkouvardos, I.1    Fischer, S.2    Kumar, N.3    Clavel, T.4
  • 30
    • 84884127512 scopus 로고    scopus 로고
    • Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
    • Langille, M. G., Zaneveld, J., Caporaso, J. G., McDonald, D., Knights, D., Reyes, J. A., et al. (2013). Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nat. Biotechnol. 31, 814-821. doi: 10.1038/nbt.2676
    • (2013) Nat. Biotechnol , vol.31 , pp. 814-821
    • Langille, M.G.1    Zaneveld, J.2    Caporaso, J.G.3    McDonald, D.4    Knights, D.5    Reyes, J.A.6
  • 31
    • 84890340717 scopus 로고    scopus 로고
    • Oral manifestation in inflammatory bowel disease: a review
    • Lankarani, K. B., Sivandzadeh, G. R., and Hassanpour, S. (2013). Oral manifestation in inflammatory bowel disease: a review. World J. Gastroenterol. 19, 8571-8579. doi: 10.3748/wjg.v19.i46.8571
    • (2013) World J. Gastroenterol , vol.19 , pp. 8571-8579
    • Lankarani, K.B.1    Sivandzadeh, G.R.2    Hassanpour, S.3
  • 32
    • 33845901507 scopus 로고    scopus 로고
    • Microbial ecology: human gut microbes associated with obesity
    • Ley, R. E., Turnbaugh, P. J., Klein, S., and Gordon, J. I. (2006). Microbial ecology: human gut microbes associated with obesity. Nature 444, 1022-1023. doi: 10.1038/4441022a
    • (2006) Nature , vol.444 , pp. 1022-1023
    • Ley, R.E.1    Turnbaugh, P.J.2    Klein, S.3    Gordon, J.I.4
  • 33
    • 80054913451 scopus 로고    scopus 로고
    • FLASH: fast length adjustment of short reads to improve genome assemblies
    • Magoc, T., and Salzberg, S. L. (2011). FLASH: fast length adjustment of short reads to improve genome assemblies. Bioinformatics 27, 2957-2963. doi: 10.1093/bioinformatics/btr507
    • (2011) Bioinformatics , vol.27 , pp. 2957-2963
    • Magoc, T.1    Salzberg, S.L.2
  • 34
    • 78650386765 scopus 로고    scopus 로고
    • Host attachment, invasion, and stimulation of proinflammatory cytokines by Campylobacter concisus and other non-Campylobacter jejuni Campylobacter species
    • Man, S. M., Kaakoush, N. O., Leach, S. T., Nahidi, L., Lu, H. K., Norman, J., et al. (2010). Host attachment, invasion, and stimulation of proinflammatory cytokines by Campylobacter concisus and other non-Campylobacter jejuni Campylobacter species. J. Infect. Dis. 202, 1855-1865. doi: 10.1086/657316
    • (2010) J. Infect. Dis , vol.202 , pp. 1855-1865
    • Man, S.M.1    Kaakoush, N.O.2    Leach, S.T.3    Nahidi, L.4    Lu, H.K.5    Norman, J.6
  • 35
    • 84986607529 scopus 로고    scopus 로고
    • Disease severity and immune activity relate to distinct Interkingdom gut microbiome states in ethnically distinct ulcerative colitis patients
    • Mar, J. S., LaMere, B. J., Lin, D. L., Levan, S., Nazareth, M., Mahadevan, U., et al. (2016). Disease severity and immune activity relate to distinct Interkingdom gut microbiome states in ethnically distinct ulcerative colitis patients. mBio 7:e01072-16. doi: 10.1128/mBio.01072-16
    • (2016) mBio , vol.7
    • Mar, J.S.1    LaMere, B.J.2    Lin, D.L.3    Levan, S.4    Nazareth, M.5    Mahadevan, U.6
  • 36
    • 84886019355 scopus 로고    scopus 로고
    • Deep sequencing identifies ethnicity-specific bacterial signatures in the oral microbiome
    • Mason, M. R., Nagaraja, H. N., Camerlengo, T., Joshi, V., and Kumar, P. S. (2013). Deep sequencing identifies ethnicity-specific bacterial signatures in the oral microbiome. PLoS One 8:e77287. doi: 10.1371/journal.pone.0077287
    • (2013) PLoS One , vol.8
    • Mason, M.R.1    Nagaraja, H.N.2    Camerlengo, T.3    Joshi, V.4    Kumar, P.S.5
  • 37
    • 84857122937 scopus 로고    scopus 로고
    • An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
    • McDonald, D., Price, M. N., Goodrich, J., Nawrocki, E. P., DeSantis, T. Z., Probst, A., et al. (2012). An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea. ISME J. 6, 610-618. doi: 10.1038/ismej.2011.139
    • (2012) ISME J , vol.6 , pp. 610-618
    • McDonald, D.1    Price, M.N.2    Goodrich, J.3    Nawrocki, E.P.4    DeSantis, T.Z.5    Probst, A.6
  • 38
    • 72849144434 scopus 로고    scopus 로고
    • Sequencing technologies-the next generation
    • Metzker, M. L. (2010). Sequencing technologies-the next generation. Nat. Rev. Genet. 11, 31-46. doi: 10.1038/nrg2626
    • (2010) Nat. Rev. Genet , vol.11 , pp. 31-46
    • Metzker, M.L.1
  • 39
    • 0000635715 scopus 로고
    • The human mouth as a focus of infection
    • Miller, W. D. (1891). The human mouth as a focus of infection. Dent. Cosmos 33, 689-706. doi: 10.1016/S0140-6736(02)01387-9
    • (1891) Dent. Cosmos , vol.33 , pp. 689-706
    • Miller, W.D.1
  • 40
    • 84977085549 scopus 로고    scopus 로고
    • The gut microbiota and inflammatory bowel diseases
    • Miyoshi, J., and Chang, E. B. (2017). The gut microbiota and inflammatory bowel diseases. Transl. Res. 179, 38-48. doi: 10.1016/j.trsl.2016.06.002
    • (2017) Transl. Res , vol.179 , pp. 38-48
    • Miyoshi, J.1    Chang, E.B.2
  • 41
    • 83755219473 scopus 로고    scopus 로고
    • Increasing incidence and prevalence of the inflammatory bowel diseases with time, based on systematic review
    • Molodecky, N. A., Soon, I. S., Rabi, D. M., Ghali, W. A., Ferris, M., Chernoff, G., et al. (2012). Increasing incidence and prevalence of the inflammatory bowel diseases with time, based on systematic review. Gastroenterology 142, 46-54. doi: 10.1053/j.gastro.2011.10.001
    • (2012) Gastroenterology , vol.142 , pp. 46-54
    • Molodecky, N.A.1    Soon, I.S.2    Rabi, D.M.3    Ghali, W.A.4    Ferris, M.5    Chernoff, G.6
  • 42
    • 84866549438 scopus 로고    scopus 로고
    • Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment
    • Morgan, X. C., Tickle, T. L., Sokol, H., Gevers, D., Devaney, K. L., Ward, D. V., et al. (2012). Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment. Genome Biol. 13:R79. doi: 10.1186/gb-2012-13-9-r79
    • (2012) Genome Biol , vol.13
    • Morgan, X.C.1    Tickle, T.L.2    Sokol, H.3    Gevers, D.4    Devaney, K.L.5    Ward, D.V.6
  • 43
    • 84946144999 scopus 로고    scopus 로고
    • Gut mucosal microbiome across stages of colorectal carcinogenesis
    • Nakatsu, G., Li, X., Zhou, H., Sheng, J., Wong, S. H., Wu, W. K., et al. (2015). Gut mucosal microbiome across stages of colorectal carcinogenesis. Nat. Commun. 6:8727. doi: 10.1038/ncomms9727
    • (2015) Nat. Commun , vol.6 , pp. 8727
    • Nakatsu, G.1    Li, X.2    Zhou, H.3    Sheng, J.4    Wong, S.H.5    Wu, W.K.6
  • 45
    • 2342442430 scopus 로고    scopus 로고
    • Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease
    • Ott, S. J., Musfeldt, M., Wenderoth, D. F., Hampe, J., Brant, O., Folsch, U. R., et al. (2004). Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease. Gut 53, 685-693. doi: 10.1136/gut.2003.025403
    • (2004) Gut , vol.53 , pp. 685-693
    • Ott, S.J.1    Musfeldt, M.2    Wenderoth, D.F.3    Hampe, J.4    Brant, O.5    Folsch, U.R.6
  • 46
    • 84866448342 scopus 로고    scopus 로고
    • Helicobacter pylori DNA's anti-inflammatory effect on experimental colitis
    • Owyang, S. Y., Luther, J., Owyang, C. C., Zhang, M., and Kao, J. Y. (2012). Helicobacter pylori DNA's anti-inflammatory effect on experimental colitis. Gut Microbes 3, 168-171. doi: 10.4161/gmic.19181
    • (2012) Gut Microbes , vol.3 , pp. 168-171
    • Owyang, S.Y.1    Luther, J.2    Owyang, C.C.3    Zhang, M.4    Kao, J.Y.5
  • 47
    • 84907225684 scopus 로고    scopus 로고
    • Alterations of the human gut microbiome in liver cirrhosis
    • Qin, N., Yang, F., Li, A., Prifti, E., Chen, Y., Shao, L., et al. (2014). Alterations of the human gut microbiome in liver cirrhosis. Nature 513, 59-64. doi: 10.1038/nature13568
    • (2014) Nature , vol.513 , pp. 59-64
    • Qin, N.1    Yang, F.2    Li, A.3    Prifti, E.4    Chen, Y.5    Shao, L.6
  • 48
    • 0030695381 scopus 로고    scopus 로고
    • Search for Mycobacterium paratuberculosis DNA in orofacial granulomatosis and oral Crohn's disease tissue by polymerase chain reaction
    • Riggio, M. P., Gibson, J., Lennon, A., Wray, D., and MacDonald, D. G. (1997). Search for Mycobacterium paratuberculosis DNA in orofacial granulomatosis and oral Crohn's disease tissue by polymerase chain reaction. Gut 41, 646-650. doi: 10.1136/gut.41.5.646
    • (1997) Gut , vol.41 , pp. 646-650
    • Riggio, M.P.1    Gibson, J.2    Lennon, A.3    Wray, D.4    MacDonald, D.G.5
  • 49
    • 84867103263 scopus 로고    scopus 로고
    • Chronic intestinal inflammation: inflammatory bowel disease and colitis-associated colon cancer
    • Rubin, D. C., Shaker, A., and Levin, M. S. (2012). Chronic intestinal inflammation: inflammatory bowel disease and colitis-associated colon cancer. Front. Immunol. 3:107. doi: 10.3389/fimmu.2012.00107
    • (2012) Front. Immunol , vol.3 , pp. 107
    • Rubin, D.C.1    Shaker, A.2    Levin, M.S.3
  • 50
    • 84894541081 scopus 로고    scopus 로고
    • Dysbiosis of salivary microbiota in inflammatory bowel disease and its association with oral immunological biomarkers
    • Said, H. S., Suda, W., Nakagome, S., Chinen, H., Oshima, K., Kim, S., et al. (2014). Dysbiosis of salivary microbiota in inflammatory bowel disease and its association with oral immunological biomarkers. DNA Res. 21, 15-25. doi: 10.1093/dnares/dst037
    • (2014) DNA Res , vol.21 , pp. 15-25
    • Said, H.S.1    Suda, W.2    Nakagome, S.3    Chinen, H.4    Oshima, K.5    Kim, S.6
  • 51
    • 33845699451 scopus 로고    scopus 로고
    • Differences in microbiological composition of saliva and dental plaque in subjects with different drinking habits
    • Signoretto, C., Burlacchini, G., Bianchi, F., Cavalleri, G., and Canepari, P. (2006). Differences in microbiological composition of saliva and dental plaque in subjects with different drinking habits. New Microbiol. 29, 293-302
    • (2006) New Microbiol , vol.29 , pp. 293-302
    • Signoretto, C.1    Burlacchini, G.2    Bianchi, F.3    Cavalleri, G.4    Canepari, P.5
  • 52
    • 18744408812 scopus 로고    scopus 로고
    • Periodontitis as manifestation of Crohn's disease in primary dentition: a case report
    • Sigusch, B. W. (2004). Periodontitis as manifestation of Crohn's disease in primary dentition: a case report. J. Dent. Child. 71, 193-196
    • (2004) J. Dent. Child , vol.71 , pp. 193-196
    • Sigusch, B.W.1
  • 53
    • 84975143308 scopus 로고    scopus 로고
    • Immune dysregulation mediated by the oral microbiome: potential link to chronic inflammation and atherosclerosis
    • Slocum, C., Kramer, C., and Genco, C. A. (2016). Immune dysregulation mediated by the oral microbiome: potential link to chronic inflammation and atherosclerosis. J. Intern. Med. 280, 114-128. doi: 10.1111/joim.12476
    • (2016) J. Intern. Med , vol.280 , pp. 114-128
    • Slocum, C.1    Kramer, C.2    Genco, C.A.3
  • 55
    • 33745612095 scopus 로고    scopus 로고
    • Pvclust: an R package for assessing the uncertainty in hierarchical clustering
    • Suzuki, R., and Shimodaira, H. (2006). Pvclust: an R package for assessing the uncertainty in hierarchical clustering. Bioinformatics 22, 1540-1542. doi: 10.1093/bioinformatics/btl117
    • (2006) Bioinformatics , vol.22 , pp. 1540-1542
    • Suzuki, R.1    Shimodaira, H.2
  • 56
    • 84941271231 scopus 로고    scopus 로고
    • Prediction of early childhood caries via spatial-temporal variations of oral microbiota
    • Teng, F., Yang, F., Huang, S., Bo, C., Xu, Z. Z., Amir, A., et al. (2015). Prediction of early childhood caries via spatial-temporal variations of oral microbiota. Cell Host Microbe 18, 296-306. doi: 10.1016/j.chom.2015.08.005
    • (2015) Cell Host Microbe , vol.18 , pp. 296-306
    • Teng, F.1    Yang, F.2    Huang, S.3    Bo, C.4    Xu, Z.Z.5    Amir, A.6
  • 57
    • 0026198498 scopus 로고
    • Synergistic degradation of mucin by Streptococcus oralis and Streptococcus sanguis in mixed chemostat cultures
    • Van der Hoeven, J. S., and Camp, P. J. (1991). Synergistic degradation of mucin by Streptococcus oralis and Streptococcus sanguis in mixed chemostat cultures. J. Dent. Res. 70, 1041-1044. doi: 10.1177/00220345910700070401
    • (1991) J. Dent. Res , vol.70 , pp. 1041-1044
    • Van der Hoeven, J.S.1    Camp, P.J.2
  • 58
    • 84873708523 scopus 로고    scopus 로고
    • The oral microbiome in health and disease
    • Wade, W. G. (2013). The oral microbiome in health and disease. Pharmacol. Res. 69, 137-143. doi: 10.1016/j.phrs.2012.11.006
    • (2013) Pharmacol. Res , vol.69 , pp. 137-143
    • Wade, W.G.1
  • 59
    • 78650973052 scopus 로고    scopus 로고
    • High-throughput clone library analysis of the mucosa-associated microbiota reveals dysbiosis and differences between inflamed and non-inflamed regions of the intestine in inflammatory bowel disease
    • Walker, A. W., Sanderson, J. D., Churcher, C., Parkes, G. C., Hudspith, B. N., Rayment, N., et al. (2011). High-throughput clone library analysis of the mucosa-associated microbiota reveals dysbiosis and differences between inflamed and non-inflamed regions of the intestine in inflammatory bowel disease. BMC Microbiol. 11:7. doi: 10.1186/1471-2180-11-7
    • (2011) BMC Microbiol , vol.11 , pp. 7
    • Walker, A.W.1    Sanderson, J.D.2    Churcher, C.3    Parkes, G.C.4    Hudspith, B.N.5    Rayment, N.6
  • 60
    • 69949129819 scopus 로고    scopus 로고
    • Proteolytic degradation of human salivary MUC5B by dental biofilms
    • Wickstrom, C., Herzberg, M. C., Beighton, D., and Svensater, G. (2009). Proteolytic degradation of human salivary MUC5B by dental biofilms. Microbiology 155(Pt 9), 2866-2872. doi: 10.1099/mic.0.030536-0
    • (2009) Microbiology , vol.155 , pp. 2866-2872
    • Wickstrom, C.1    Herzberg, M.C.2    Beighton, D.3    Svensater, G.4
  • 61
    • 84928174785 scopus 로고    scopus 로고
    • Helicobacter pylori infection and inflammatory bowel disease in Asians: a meta-analysis
    • Wu, X. W., Ji, H. Z., Yang, M. F., Wu, L., and Wang, F. Y. (2015). Helicobacter pylori infection and inflammatory bowel disease in Asians: a meta-analysis. World J. Gastroenterol. 21, 4750-4756. doi: 10.3748/wjg.v21.i15.4750
    • (2015) World J. Gastroenterol , vol.21 , pp. 4750-4756
    • Wu, X.W.1    Ji, H.Z.2    Yang, M.F.3    Wu, L.4    Wang, F.Y.5
  • 62
    • 84925042093 scopus 로고    scopus 로고
    • Oral cavity contains distinct niches with dynamic microbial communities
    • Xu, X., He, J. Z., Xue, J., Wang, Y., Li, K., Zhang, K. K., et al. (2015). Oral cavity contains distinct niches with dynamic microbial communities. Environ. Microbiol. 17, 699-710. doi: 10.1111/1462-2920.12502
    • (2015) Environ. Microbiol , vol.17 , pp. 699-710
    • Xu, X.1    He, J.Z.2    Xue, J.3    Wang, Y.4    Li, K.5    Zhang, K.K.6
  • 63
    • 84954427783 scopus 로고    scopus 로고
    • Helicobacter pylori colonization of the oral cavity: a milestone discovery
    • Yee, J. K. (2016). Helicobacter pylori colonization of the oral cavity: a milestone discovery. World J. Gastroenterol. 22, 641-648. doi: 10.3748/wjg.v22.i2.641
    • (2016) World J. Gastroenterol , vol.22 , pp. 641-648
    • Yee, J.K.1
  • 65
    • 84938817346 scopus 로고    scopus 로고
    • The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment
    • Zhang, X., Zhang, D. Y., Jia, H. J., Feng, Q., Wang, D. H., Liang, D., et al. (2015). The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment. Nat. Med. 21, 895-905. doi: 10.1038/nm.3914
    • (2015) Nat. Med , vol.21 , pp. 895-905
    • Zhang, X.1    Zhang, D.Y.2    Jia, H.J.3    Feng, Q.4    Wang, D.H.5    Liang, D.6


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