-
1
-
-
84995588026
-
Protein function machinery: From basic structural units to modulation of activity
-
Berezovsky, I.N. et al. (2017) Protein function machinery: from basic structural units to modulation of activity. Curr. Opin. Struct. Biol., 42, 67-74.
-
(2017)
Curr. Opin. Struct. Biol.
, vol.42
, pp. 67-74
-
-
Berezovsky, I.N.1
-
2
-
-
0033954256
-
The protein data bank
-
Berman, H.M. et al. (2000) The protein data bank. Nucleic Acids Res., 28, 235-242.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
-
3
-
-
48249141040
-
Allostery and cooperativity revisited
-
Cui, Q. and Karplus, M. (2008) Allostery and cooperativity revisited. Protein Sci., 17, 1295-1307.
-
(2008)
Protein Sci.
, vol.17
, pp. 1295-1307
-
-
Cui, Q.1
Karplus, M.2
-
4
-
-
84883568730
-
SPACER: Server for predicting allosteric communication and effects of regulation
-
Goncearenco, A. et al. (2013) SPACER: server for predicting allosteric communication and effects of regulation. Nucleic Acids Res., 41(Web Server issue), W266-W272.
-
(2013)
Nucleic Acids Res.
, vol.41
, Issue.WEB SERVER ISSUE
, pp. W266-W272
-
-
Goncearenco, A.1
-
5
-
-
84946906524
-
Allosteric sites: Remote control in regulation of protein activity
-
Guarnera, E. and Berezovsky, I.N. (2016) Allosteric sites: remote control in regulation of protein activity. Curr. Opin. Struct. Biol., 37, 1-8.
-
(2016)
Curr. Opin. Struct. Biol.
, vol.37
, pp. 1-8
-
-
Guarnera, E.1
Berezovsky, I.N.2
-
6
-
-
84962124121
-
Structure-based statistical mechanical model accounts for the causality and energetics of allosteric communication
-
Guarnera, E. and Berezovsky, I.N. (2016) Structure-based statistical mechanical model accounts for the causality and energetics of allosteric communication. PLoS Comput. Biol., 12, e1004678.
-
(2016)
PLoS Comput. Biol.
, vol.12
, pp. e1004678
-
-
Guarnera, E.1
Berezovsky, I.N.2
-
7
-
-
6344219895
-
Is allostery an intrinsic property of all dynamic proteins?
-
Gunasekaran, K. et al. (2004) Is allostery an intrinsic property of all dynamic proteins? Proteins, 57, 433-443.
-
(2004)
Proteins
, vol.57
, pp. 433-443
-
-
Gunasekaran, K.1
-
8
-
-
0001962564
-
The molecular modeling toolkit: A new approach to molecular simulations
-
Hinsen, K. (2000) The molecular modeling toolkit: a new approach to molecular simulations. J. Comput. Chem., 21, 79-85.
-
(2000)
J. Comput. Chem.
, vol.21
, pp. 79-85
-
-
Hinsen, K.1
-
9
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
Krissinel, E. and Henrick, K. (2007) Inference of macromolecular assemblies from crystalline state. J. Mol. Biol., 372, 774-797.
-
(2007)
J. Mol. Biol.
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
10
-
-
85020325128
-
Toward allosterically increased catalytic activity of insulin-degrading enzyme against amyloid peptides
-
Kurochkin, I.V. et al. (2017) Toward allosterically increased catalytic activity of insulin-degrading enzyme against amyloid peptides. Biochemistry, 56, 228-239.
-
(2017)
Biochemistry
, vol.56
, pp. 228-239
-
-
Kurochkin, I.V.1
-
11
-
-
84891765041
-
MMDB and VAST: Tracking structural similarities between macromolecular complexes
-
Madej, T. et al. (2014) MMDB and VAST: tracking structural similarities between macromolecular complexes. Nucleic Acids Res., 42(Database issue), D297-D303.
-
(2014)
Nucleic Acids Res.
, vol.42
, Issue.DATABASE ISSUE
, pp. D297-D303
-
-
Madej, T.1
-
12
-
-
84855283469
-
Coherent conformational degrees of freedom as a structural basis for allosteric communication
-
Mitternacht, S. and Berezovsky, I.N. (2011) Coherent conformational degrees of freedom as a structural basis for allosteric communication. PLoS Comput. Biol., 7, e1002301.
-
(2011)
PLoS Comput. Biol.
, vol.7
, pp. e1002301
-
-
Mitternacht, S.1
Berezovsky, I.N.2
-
13
-
-
84884546753
-
Modulation of global low-frequency motions underlies allosteric regulation: Demonstration in CRP/FNR family transcription factors
-
Rodgers, T.L. et al. (2013) Modulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors. PLoS Biol., 11, e1001651.
-
(2013)
PLoS Biol.
, vol.11
, pp. e1001651
-
-
Rodgers, T.L.1
-
14
-
-
85008178819
-
Proteome-scale investigation of protein allosteric regulation perturbed by somatic mutations in 7, 000 cancer genomes
-
Shen, Q. et al. (2017) Proteome-scale investigation of protein allosteric regulation perturbed by somatic mutations in 7, 000 cancer genomes. Am. J. Hum. Genet., 100, 5-20.
-
(2017)
Am. J. Hum. Genet.
, vol.100
, pp. 5-20
-
-
Shen, Q.1
-
15
-
-
84976873372
-
ASD v3.0: Unraveling allosteric regulation with structural mechanisms and biological networks
-
Shen, Q. et al. (2016) ASD v3.0: unraveling allosteric regulation with structural mechanisms and biological networks. Nucleic Acids Res., 44, D527-D535.
-
(2016)
Nucleic Acids Res.
, vol.44
, pp. D527-D535
-
-
Shen, Q.1
|