-
1
-
-
0001258914
-
The burst size distribution in the growth of bacterial viruses (Bacteriophages)
-
Delbruck M. 1945. The burst size distribution in the growth of bacterial viruses (bacteriophages). J Bacteriol 50:131-135.
-
(1945)
J Bacteriol
, vol.50
, pp. 131-135
-
-
Delbruck, M.1
-
2
-
-
60349083295
-
Growth of an RNA virus in single cells reveals a broad fitness distribution
-
Zhu Y, Yongky A, Yin J. 2009. Growth of an RNA virus in single cells reveals a broad fitness distribution. Virology 385:39-46. https://doi.org/10.1016/j.virol.2008.10.031.
-
(2009)
Virology
, vol.385
, pp. 39-46
-
-
Zhu, Y.1
Yongky, A.2
Yin, J.3
-
3
-
-
84856235072
-
Kinetics of virus production from single cells
-
Timm A, Yin J. 2012. Kinetics of virus production from single cells. Virology 424:11-17. https://doi.org/10.1016/j.virol.2011.12.005.
-
(2012)
Virology
, vol.424
, pp. 11-17
-
-
Timm, A.1
Yin, J.2
-
4
-
-
84899811665
-
Single-cell analysis uncovers extensive biological noise in poliovirus replication
-
Schulte MB, Andino R. 2014. Single-cell analysis uncovers extensive biological noise in poliovirus replication. J Virol 88:6205-6212. https://doi.org/10.1128/JVI.03539-13.
-
(2014)
J Virol
, vol.88
, pp. 6205-6212
-
-
Schulte, M.B.1
Ino, R.2
-
5
-
-
84944213433
-
Single-cell analysis of RNA virus infection identifies multiple genetically diverse viral genomes within single infectious units
-
Combe M, Garijo R, Geller R, Cuevas JM, Sanjuan R. 2015. Single-cell analysis of RNA virus infection identifies multiple genetically diverse viral genomes within single infectious units. Cell Host Microbe 18:424-432. https://doi.org/10.1016/j.chom.2015.09.009.
-
(2015)
Cell Host Microbe
, vol.18
, pp. 424-432
-
-
Combe, M.1
Garijo, R.2
Geller, R.3
Cuevas, J.M.4
Sanjuan, R.5
-
6
-
-
84947782751
-
Single-cell analysis and stochastic modelling unveil large cell-to-cell variability in influenza A virus infection
-
Heldt FS, Kupke SY, Dorl S, Reichl U, Frensing T. 2015. Single-cell analysis and stochastic modelling unveil large cell-to-cell variability in influenza A virus infection. Nat Commun 6:8938. https://doi.org/10.1038/ncomms9938.
-
(2015)
Nat Commun
, vol.6
, pp. 8938
-
-
Heldt, F.S.1
Kupke, S.Y.2
Dorl, S.3
Reichl, U.4
Frensing, T.5
-
7
-
-
84916671985
-
Statistical studies of the nature of the infectious unit of vaccine virus
-
Parker RF. 1938. Statistical studies of the nature of the infectious unit of vaccine virus. J Exp Med 67:725-738. https://doi.org/10.1084/jem.67.5.725.
-
(1938)
J Exp Med
, vol.67
, pp. 725-738
-
-
Parker, R.F.1
-
8
-
-
0004270945
-
-
Cambridge University Press, Cambridge, United Kingdom
-
Smith JM. 1968. Mathematical ideas in biology. Cambridge University Press, Cambridge, United Kingdom.
-
(1968)
Mathematical Ideas in Biology
-
-
Smith, J.M.1
-
9
-
-
85007545288
-
Gene expression correlates with the number of herpes viral genomes initiating infection in single cells
-
Cohen EM, Kobiler O. 2016. Gene expression correlates with the number of herpes viral genomes initiating infection in single cells. PLoS Pathog 12:e1006082. https://doi.org/10.1371/journal.ppat.1006082.
-
(2016)
Plos Pathog
, vol.12
-
-
Cohen, E.M.1
Kobiler, O.2
-
10
-
-
0014961824
-
Defective viral particles and viral disease processes
-
Huang AS, Baltimore D. 1970. Defective viral particles and viral disease processes. Nature 226:325-327. https://doi.org/10.1038/226325a0.
-
(1970)
Nature
, vol.226
, pp. 325-327
-
-
Huang, A.S.1
Baltimore, D.2
-
11
-
-
84876406925
-
The role of mutational robustness in RNA virus evolution
-
Lauring AS, Frydman J, Andino R. 2013. The role of mutational robustness in RNA virus evolution. Nat Rev Microbiol 11:327-336. https://doi.org/10.1038/nrmicro3003.
-
(2013)
Nat Rev Microbiol
, vol.11
, pp. 327-336
-
-
Lauring, A.S.1
Frydman, J.2
Ino, R.3
-
12
-
-
84908357284
-
Costs and benefits of mutational robustness in RNA viruses
-
Stern A, Bianco S, Yeh MT, Wright C, Butcher K, Tang C, Nielsen R, Andino R. 2014. Costs and benefits of mutational robustness in RNA viruses. Cell Rep 8:1026-1036. https://doi.org/10.1016/j.celrep.2014.07.011.
-
(2014)
Cell Rep
, vol.8
, pp. 1026-1036
-
-
Stern, A.1
Bianco, S.2
Yeh, M.T.3
Wright, C.4
Butcher, K.5
Tang, C.6
Nielsen, R.7
Ino, R.8
-
13
-
-
0037119587
-
Stochastic gene expression in a single cell
-
Elowitz MB, Levine AJ, Siggia ED, Swain PS. 2002. Stochastic gene expression in a single cell. Science 297:1183-1186. https://doi.org/10.1126/science.1070919.
-
(2002)
Science
, vol.297
, pp. 1183-1186
-
-
Elowitz, M.B.1
Levine, A.J.2
Siggia, E.D.3
Swain, P.S.4
-
14
-
-
57349097152
-
Dynamic proteomics of individual cancer cells in response to a drug
-
Cohen AA, Geva-Zatorsky N, Eden E, Frenkel-Morgenstern M, Issaeva I, Sigal A, Milo R, Cohen-Saidon C, Liron Y, Kam Z, Cohen L, Danon T, Perzov N, Alon U. 2008. Dynamic proteomics of individual cancer cells in response to a drug. Science 322:1511-1516. https://doi.org/10.1126/science.1160165.
-
(2008)
Science
, vol.322
, pp. 1511-1516
-
-
Cohen, A.A.1
Geva-Zatorsky, N.2
Eden, E.3
Frenkel-Morgenstern, M.4
Issaeva, I.5
Sigal, A.6
Milo, R.7
Cohen-Saidon, C.8
Liron, Y.9
Kam, Z.10
Cohen, L.11
Danon, T.12
Perzov, N.13
Alon, U.14
-
15
-
-
77954541844
-
Single-cell NF-kappaB dynamics reveal digital activation and analogue information processing
-
Tay S, Hughey JJ, Lee TK, Lipniacki T, Quake SR, Covert MW. 2010. Single-cell NF-kappaB dynamics reveal digital activation and analogue information processing. Nature 466:267-271. https://doi.org/10.1038/nature09145.
-
(2010)
Nature
, vol.466
, pp. 267-271
-
-
Tay, S.1
Hughey, J.J.2
Lee, T.K.3
Lipniacki, T.4
Quake, S.R.5
Covert, M.W.6
-
16
-
-
81955161928
-
We are all individuals: Causes and consequences of non-genetic heterogeneity in mammalian cells
-
Loewer A, Lahav G. 2011. We are all individuals: causes and consequences of non-genetic heterogeneity in mammalian cells. Curr Opin Genet Dev 21:753-758. https://doi.org/10.1016/j.gde.2011.09.010.
-
(2011)
Curr Opin Genet Dev
, vol.21
, pp. 753-758
-
-
Loewer, A.1
Lahav, G.2
-
17
-
-
84922158115
-
Noise facilitates transcriptional control under dynamic inputs
-
Kellogg RA, Tay S. 2015. Noise facilitates transcriptional control under dynamic inputs. Cell 160:381-392. https://doi.org/10.1016/j.cell.2015.01.013.
-
(2015)
Cell
, vol.160
, pp. 381-392
-
-
Kellogg, R.A.1
Tay, S.2
-
18
-
-
70349466529
-
Population context determines cell-to-cell variability in endocytosis and virus infection
-
Snijder B, Sacher R, Ramo P, Damm E-M, Liberali P, Pelkmans L. 2009. Population context determines cell-to-cell variability in endocytosis and virus infection. Nature 461:520-523. https://doi.org/10.1038/nature08282.
-
(2009)
Nature
, vol.461
, pp. 520-523
-
-
Snijder, B.1
Sacher, R.2
Ramo, P.3
Damm, E.-M.4
Liberali, P.5
Pelkmans, L.6
-
19
-
-
84860187343
-
Single-cell analysis of populationcontext advances RNAi screening at multiple levels
-
Snijder B, Sacher R, Ramo P, Liberali P, Mench K, Wolfrum N, Burleigh L, Scott CC, Verheije MH, Mercer J, Moese S, Heger T, Theusner K, Jurgeit A, Lamparter D, Balistreri G, Schelhaas M, De Haan CAM, Marjomaki V, Hyypia T, Rottier PJM, Sodeik B, Marsh M, Gruenberg J, Amara A, Greber U, Helenius A, Pelkmans L. 2012. Single-cell analysis of populationcontext advances RNAi screening at multiple levels. Mol Syst Biol 8:579. https://doi.org/10.1038/msb.2012.9.
-
(2012)
Mol Syst Biol
, vol.8
, pp. 579
-
-
Snijder, B.1
Sacher, R.2
Ramo, P.3
Liberali, P.4
Mench, K.5
Wolfrum, N.6
Burleigh, L.7
Scott, C.C.8
Verheije, M.H.9
Mercer, J.10
Moese, S.11
Heger, T.12
Theusner, K.13
Jurgeit, A.14
Lamparter, D.15
Balistreri, G.16
Schelhaas, M.17
De Haan, C.18
Marjomaki, V.19
Hyypia, T.20
Rottier, P.21
Sodeik, B.22
Marsh, M.23
Gruenberg, J.24
Amara, A.25
Greber, U.26
Helenius, A.27
Pelkmans, L.28
more..
-
20
-
-
34247262967
-
Herpesviruses
-
chapter 68, In Baron S (ed), 4th edition. University of Texas Medical Branch at Galveston, Galveston, TX
-
Whitley RJ. Herpesviruses, chapter 68. 1996. In Baron S (ed), Medical microbiology, 4th edition. University of Texas Medical Branch at Galveston, Galveston, TX. https://www.ncbi.nlm.nih.gov/books/NBK8157/.
-
(1996)
Medical Microbiology
-
-
Whitley, R.J.1
-
21
-
-
84948712700
-
Interleukin-1α released from HSV-1-infected keratinocytes acts as a functional alarmin in the skin
-
Milora KA, Miller SL, Sanmiguel JC, Jensen LE. 2014. Interleukin-1α released from HSV-1-infected keratinocytes acts as a functional alarmin in the skin. Nat Commun 5:5230. https://doi.org/10.1038/ncomms6230.
-
(2014)
Nat Commun
, vol.5
, pp. 5230
-
-
Milora, K.A.1
Miller, S.L.2
Sanmiguel, J.C.3
Jensen, L.E.4
-
22
-
-
84995511503
-
Herpes simplex virus 1 enters human keratinocytes by a nectin-1-dependent, rapid plasma membrane fusion pathway that functions at low temperature
-
Sayers CL, Elliott G. 2016. Herpes simplex virus 1 enters human keratinocytes by a nectin-1-dependent, rapid plasma membrane fusion pathway that functions at low temperature. J Virol 90:10379-10389. https://doi.org/10.1128/JVI.01582-16.
-
(2016)
J Virol
, vol.90
, pp. 10379-10389
-
-
Sayers, C.L.1
Elliott, G.2
-
23
-
-
0024276563
-
Formation of DNA replication structures in herpes virus-infected cells requires a viral DNA binding protein
-
de Bruyn Kops A, Knipe DM. 1988. Formation of DNA replication structures in herpes virus-infected cells requires a viral DNA binding protein. Cell 55:857-868. https://doi.org/10.1016/0092-8674(88)90141-9.
-
(1988)
Cell
, vol.55
, pp. 857-868
-
-
De Bruyn Kops, A.1
Knipe, D.M.2
-
24
-
-
0034652406
-
Herpes simplex virus type 1 infection imposes a G1/S block in asynchronously growing cells and prevents G1 entry in quiescent cells
-
Ehmann GL, McLean TI, Bachenheimer SL. 2000. Herpes simplex virus type 1 infection imposes a G1/S block in asynchronously growing cells and prevents G1 entry in quiescent cells. Virology 267:335-349. https://doi.org/10.1006/viro.1999.0147.
-
(2000)
Virology
, vol.267
, pp. 335-349
-
-
Ehmann, G.L.1
McLean, T.I.2
Bachenheimer, S.L.3
-
25
-
-
0034652407
-
Herpes simplex virus infection blocks events in the G1 phase of the cell cycle
-
Song B, Liu JJ, Yeh KC, Knipe DM. 2000. Herpes simplex virus infection blocks events in the G1 phase of the cell cycle. Virology 267:326-334. https://doi.org/10.1006/viro.1999.0146.
-
(2000)
Virology
, vol.267
, pp. 326-334
-
-
Song, B.1
Liu, J.J.2
Yeh, K.C.3
Knipe, D.M.4
-
26
-
-
0032863957
-
Herpes simplex virus type 1 immediateearly protein Vmw110 inhibits progression of cells through mitosis and from G1 into S phase of the cell cycle
-
Lomonte P, Everett RD. 1999. Herpes simplex virus type 1 immediateearly protein Vmw110 inhibits progression of cells through mitosis and from G1 into S phase of the cell cycle. J Virol 73:9456-9467.
-
(1999)
J Virol
, vol.73
, pp. 9456-9467
-
-
Lomonte, P.1
Everett, R.D.2
-
27
-
-
0344995285
-
Perturbation of cell cycle progression and cellular gene expression as a function of herpes simplex virus ICP0
-
Hobbs WE, DeLuca NA. 1999. Perturbation of cell cycle progression and cellular gene expression as a function of herpes simplex virus ICP0. J Virol 73:8245-8255.
-
(1999)
J Virol
, vol.73
, pp. 8245-8255
-
-
Hobbs, W.E.1
Deluca, N.A.2
-
28
-
-
42749092510
-
Chk2 is required for HSV-1 ICP0-mediated G2/M arrest and enhancement of virus growth
-
Li H, Baskaran R, Krisky DM, Bein K, Grandi P, Cohen JB, Glorioso JC. 2008. Chk2 is required for HSV-1 ICP0-mediated G2/M arrest and enhancement of virus growth. Virology 375:13-23. https://doi.org/10.1016/j.virol.2008.01.038.
-
(2008)
Virology
, vol.375
, pp. 13-23
-
-
Li, H.1
Baskaran, R.2
Krisky, D.M.3
Bein, K.4
Grandi, P.5
Cohen, J.B.6
Glorioso, J.C.7
-
29
-
-
0035950918
-
Herpes simplex virus gene products required for viral inhibition of expression of G1-phase functions
-
Song B, Yeh KC, Liu J, Knipe DM. 2001. Herpes simplex virus gene products required for viral inhibition of expression of G1-phase functions. Virology 290:320-328. https://doi.org/10.1006/viro.2001.1175.
-
(2001)
Virology
, vol.290
, pp. 320-328
-
-
Song, B.1
Yeh, K.C.2
Liu, J.3
Knipe, D.M.4
-
30
-
-
84896961038
-
Identification of herpesvirus proteins that contribute to G1/S arrest
-
Paladino P, Marcon E, Greenblatt J, Frappier L. 2014. Identification of herpesvirus proteins that contribute to G1/S arrest. J Virol 88:4480-4492. https://doi.org/10.1128/JVI.00059-14.
-
(2014)
J Virol
, vol.88
, pp. 4480-4492
-
-
Paladino, P.1
Marcon, E.2
Greenblatt, J.3
Frappier, L.4
-
31
-
-
84872478119
-
Virus strategies for passing the nuclear envelope barrier
-
Kobiler O, Drayman N, Butin-Israeli V, Oppenheim A. 2012. Virus strategies for passing the nuclear envelope barrier. Nucleus 3:526-539. https://doi.org/10.4161/nucl.21979.
-
(2012)
Nucleus
, vol.3
, pp. 526-539
-
-
Kobiler, O.1
Drayman, N.2
Butin-Israeli, V.3
Oppenheim, A.4
-
32
-
-
57349146688
-
Herpes simplex virus ICP0 promotes both histone removal and acetylation on viral DNA during lytic infection
-
Cliffe AR, Knipe DM. 2008. Herpes simplex virus ICP0 promotes both histone removal and acetylation on viral DNA during lytic infection. J Virol 82:12030-12038. https://doi.org/10.1128/JVI.01575-08.
-
(2008)
J Virol
, vol.82
, pp. 12030-12038
-
-
Cliffe, A.R.1
Knipe, D.M.2
-
33
-
-
41149097014
-
Temporal association of the herpes simplex virus genome with histone proteins during a lytic infection
-
Oh J, Fraser NW. 2008. Temporal association of the herpes simplex virus genome with histone proteins during a lytic infection. J Virol 82: 3530-3537. https://doi.org/10.1128/JVI.00586-07.
-
(2008)
J Virol
, vol.82
, pp. 3530-3537
-
-
Oh, J.1
Fraser, N.W.2
-
34
-
-
84937820106
-
The 3 facets of regulation of herpes simplex virus gene expression: A critical inquiry
-
Roizman B, Zhou G. 2015. The 3 facets of regulation of herpes simplex virus gene expression: a critical inquiry. Virology 479-480:562-567. https://doi.org/10.1016/j.virol.2015.02.036.
-
(2015)
Virology
, vol.479-480
, pp. 562-567
-
-
Roizman, B.1
Zhou, G.2
-
35
-
-
84923049179
-
HSV-1 ICP0: An E3 ubiquitin ligase that counteracts host intrinsic and innate immunity
-
Lanfranca MP, Mostafa HH, Davido DJ. 2014. HSV-1 ICP0: an E3 ubiquitin ligase that counteracts host intrinsic and innate immunity. Cells 3:438-454. https://doi.org/10.3390/cells3020438.
-
(2014)
Cells
, vol.3
, pp. 438-454
-
-
Lanfranca, M.P.1
Mostafa, H.H.2
Davido, D.J.3
-
36
-
-
85017149394
-
Time-resolved global and chromatin proteomics during herpes simplex virus type 1 (HSV-1) infection
-
Kulej K, Avgousti DC, Sidoli S, Herrmann C, Della Fera AN, Kim ET, Garcia BA, Weitzman MD. 2017. Time-resolved global and chromatin proteomics during herpes simplex virus type 1 (HSV-1) infection. Mol Cell Proteomics 16:S92-S107. https://doi.org/10.1074/mcp.M116.065987.
-
(2017)
Mol Cell Proteomics
, vol.16
, pp. SS92-S107
-
-
Kulej, K.1
Avgousti, D.C.2
Sidoli, S.3
Herrmann, C.4
Della Fera, A.N.5
Kim, E.T.6
Garcia, B.A.7
Weitzman, M.D.8
-
37
-
-
33845257870
-
Variability and memory of protein levels in human cells
-
Sigal A, Milo R, Cohen A, Geva-Zatorsky N, Klein Y, Liron Y, Rosenfeld N, Danon T, Perzov N, Alon U. 2006. Variability and memory of protein levels in human cells. Nature 444:643-646. https://doi.org/10.1038/nature05316.
-
(2006)
Nature
, vol.444
, pp. 643-646
-
-
Sigal, A.1
Milo, R.2
Cohen, A.3
Geva-Zatorsky, N.4
Klein, Y.5
Liron, Y.6
Rosenfeld, N.7
Danon, T.8
Perzov, N.9
Alon, U.10
-
38
-
-
79951472959
-
Proteome half-life dynamics in living human cells
-
Eden E, Geva-Zatorsky N, Issaeva I, Cohen A, Dekel E, Danon T, Cohen L, Mayo A, Alon U. 2011. Proteome half-life dynamics in living human cells. Science 331:764-768. https://doi.org/10.1126/science.1199784.
-
(2011)
Science
, vol.331
, pp. 764-768
-
-
Eden, E.1
Geva-Zatorsky, N.2
Issaeva, I.3
Cohen, A.4
Dekel, E.5
Danon, T.6
Cohen, L.7
Mayo, A.8
Alon, U.9
-
39
-
-
34250719724
-
Generation of a fluorescently labeled endogenous protein library in living human cells
-
Sigal A, Danon T, Cohen A, Milo R, Geva-Zatorsky N, Lustig G, Liron Y, Alon U, Perzov N. 2007. Generation of a fluorescently labeled endogenous protein library in living human cells. Nat Protoc 2:1515-1527. https://doi.org/10.1038/nprot.2007.197.
-
(2007)
Nat Protoc
, vol.2
, pp. 1515-1527
-
-
Sigal, A.1
Danon, T.2
Cohen, A.3
Milo, R.4
Geva-Zatorsky, N.5
Lustig, G.6
Liron, Y.7
Alon, U.8
Perzov, N.9
-
40
-
-
0016162063
-
Regulation of herpesvirus macromolecular synthesis. I. Cascade regulation of the synthesis of three groups of viral proteins
-
Honess RW, Roizman B. 1974. Regulation of herpesvirus macromolecular synthesis. I. Cascade regulation of the synthesis of three groups of viral proteins. J Virol 14:8-19.
-
(1974)
J Virol
, vol.14
, pp. 8-19
-
-
Honess, R.W.1
Roizman, B.2
-
41
-
-
0032511148
-
Geminin, an inhibitor of DNA replication, is degraded during mitosis
-
McGarry TJ, Kirschner MW. 1998. Geminin, an inhibitor of DNA replication, is degraded during mitosis. Cell 93:1043-1053. https://doi.org/10.1016/S0092-8674(00)81209-X.
-
(1998)
Cell
, vol.93
, pp. 1043-1053
-
-
McGarry, T.J.1
Kirschner, M.W.2
-
42
-
-
0031577261
-
Assembly of functional regulatory complexes on MHC class II promoters in vivo
-
Fontes JD, Jabrane-Ferrat N, Peterlin BM. 1997. Assembly of functional regulatory complexes on MHC class II promoters in vivo. J Mol Biol 270:336-345. https://doi.org/10.1006/jmbi.1997.1121.
-
(1997)
J Mol Biol
, vol.270
, pp. 336-345
-
-
Fontes, J.D.1
Jabrane-Ferrat, N.2
Peterlin, B.M.3
-
43
-
-
84874346987
-
Dynamics extracted from fixed cells reveal feedback linking cell growth to cell cycle
-
Kafri R, Levy J, Ginzberg MB, Oh S, Lahav G, Kirschner MW. 2013. Dynamics extracted from fixed cells reveal feedback linking cell growth to cell cycle. Nature 494:480-483. https://doi.org/10.1038/nature11897.
-
(2013)
Nature
, vol.494
, pp. 480-483
-
-
Kafri, R.1
Levy, J.2
Ginzberg, M.B.3
Oh, S.4
Lahav, G.5
Kirschner, M.W.6
-
44
-
-
84959123422
-
Trajectories of cell cycle progression from fixed cell populations
-
Gut G, Tadmor MD, Pe’er D, Pelkmans L, Liberali P. 2015. Trajectories of cell cycle progression from fixed cell populations. Nat Methods 12: 951-954. https://doi.org/10.1038/nmeth.3545.
-
(2015)
Nat Methods
, vol.12
, pp. 951-954
-
-
Gut, G.1
Tadmor, M.D.2
Pe’Er, D.3
Pelkmans, L.4
Liberali, P.5
-
45
-
-
84953896921
-
Label-free cell cycle analysis for high-throughput imaging flow cytometry
-
Blasi T, Hennig H, Summers HD, Theis FJ, Cerveira J, Patterson JO, Davies D, Filby A, Carpenter AE, Rees P. 2016. Label-free cell cycle analysis for high-throughput imaging flow cytometry. Nat Commun 7:10256. https://doi.org/10.1038/ncomms10256.
-
(2016)
Nat Commun
, vol.7
, pp. 10256
-
-
Blasi, T.1
Hennig, H.2
Summers, H.D.3
Theis, F.J.4
Cerveira, J.5
Patterson, J.O.6
Davies, D.7
Filby, A.8
Carpenter, A.E.9
Rees, P.10
-
46
-
-
0001328089
-
Studies on synchronous division of tissue culture cells initiated by excess thymidine
-
Bootsma D, Budke L, Vos O. 1964. Studies on synchronous division of tissue culture cells initiated by excess thymidine. Exp Cell Res 33: 301-309. https://doi.org/10.1016/S0014-4827(64)81035-1.
-
(1964)
Exp Cell Res
, vol.33
, pp. 301-309
-
-
Bootsma, D.1
Budke, L.2
Vos, O.3
-
47
-
-
84903133881
-
Interferon controls SUMO availability via the Lin28 and let-7 axis to impede virus replication
-
Sahin U, Ferhi O, Carnec X, Zamborlini A, Peres L, Jollivet F, Vitaliano-Prunier A, de The H, Lallemand-Breitenbach V. 2014. Interferon controls SUMO availability via the Lin28 and let-7 axis to impede virus replication. Nat Commun 5:4187. https://doi.org/10.1038/ncomms5187.
-
(2014)
Nat Commun
, vol.5
, pp. 4187
-
-
Sahin, U.1
Ferhi, O.2
Carnec, X.3
Zamborlini, A.4
Peres, L.5
Jollivet, F.6
Vitaliano-Prunier, A.7
De The, H.8
Lallemand-Breitenbach, V.9
-
48
-
-
84938775131
-
Analysis of the SUMO2 proteome during HSV-1 infection
-
Sloan E, Tatham MH, Groslambert M, Glass M, Orr A, Hay RT, Everett RD. 2015. Analysis of the SUMO2 proteome during HSV-1 infection. PLoS Pathog 11:e1005059. https://doi.org/10.1371/journal.ppat.1005059.
-
(2015)
Plos Pathog
, vol.11
-
-
Sloan, E.1
Tatham, M.H.2
Groslambert, M.3
Glass, M.4
Orr, A.5
Hay, R.T.6
Everett, R.D.7
-
49
-
-
0014540716
-
Ribonucleic acid synthesis in cells infected with herpes simplex virus. I. Patterns of ribonucleic acid synthesis in productively infected cells
-
Wagner EK, Roizman B. 1969. Ribonucleic acid synthesis in cells infected with herpes simplex virus. I. Patterns of ribonucleic acid synthesis in productively infected cells. J Virol 4:36-46.
-
(1969)
J Virol
, vol.4
, pp. 36-46
-
-
Wagner, E.K.1
Roizman, B.2
-
50
-
-
0028069405
-
RNA polymerase II is aberrantly phosphorylated and localized to viral replication compartments following herpes simplex virus infection
-
Rice SA, Long MC, Lam V, Spencer CA. 1994. RNA polymerase II is aberrantly phosphorylated and localized to viral replication compartments following herpes simplex virus infection. J Virol 68:988-1001.
-
(1994)
J Virol
, vol.68
, pp. 988-1001
-
-
Rice, S.A.1
Long, M.C.2
Lam, V.3
Spencer, C.A.4
-
51
-
-
0031058732
-
Repression of host RNA polymerase II transcription by herpes simplex virus type 1
-
Spencer CA, Dahmus ME, Rice SA. 1997. Repression of host RNA polymerase II transcription by herpes simplex virus type 1. J Virol 71: 2031-2040.
-
(1997)
J Virol
, vol.71
, pp. 2031-2040
-
-
Spencer, C.A.1
Dahmus, M.E.2
Rice, S.A.3
-
52
-
-
0034812851
-
RNA polymerase II holoenzyme modifications accompany transcription reprogramming in herpes simplex virus type 1-infected cells
-
Jenkins HL, Spencer CA. 2001. RNA polymerase II holoenzyme modifications accompany transcription reprogramming in herpes simplex virus type 1-infected cells. J Virol 75:9872-9884. https://doi.org/10.1128/JVI.75.20.9872-9884.2001.
-
(2001)
J Virol
, vol.75
, pp. 9872-9884
-
-
Jenkins, H.L.1
Spencer, C.A.2
-
53
-
-
84961125715
-
Infection by herpes simplex virus 1 causes near-complete loss of RNA polymerase II occupancy on the host cell genome
-
Abrisch RG, Eidem TM, Yakovchuk P, Kugel JF, Goodrich JA. 2015. Infection by herpes simplex virus 1 causes near-complete loss of RNA polymerase II occupancy on the host cell genome. J Virol 90:2503-2513. https://doi.org/10.1128/JVI.02665-15.
-
(2015)
J Virol
, vol.90
, pp. 2503-2513
-
-
Abrisch, R.G.1
Eidem, T.M.2
Yakovchuk, P.3
Kugel, J.F.4
Goodrich, J.A.5
-
54
-
-
0024465766
-
Herpes simplex virus type 1 ICP0 plays a critical role in the de novo synthesis of infectious virus following transfection of viral DNA
-
Cai WZ, Schaffer PA. 1989. Herpes simplex virus type 1 ICP0 plays a critical role in the de novo synthesis of infectious virus following transfection of viral DNA. J Virol 63:4579-4589.
-
(1989)
J Virol
, vol.63
, pp. 4579-4589
-
-
Cai, W.Z.1
Schaffer, P.A.2
-
55
-
-
36749024118
-
Filopodia: The fingers that do the walking
-
Gupton SL, Gertler FB. 2007. Filopodia: the fingers that do the walking. Sci STKE 2007:re5. https://doi.org/10.1126/stke.4002007re5.
-
(2007)
Sci STKE 2007
-
-
Gupton, S.L.1
Gertler, F.B.2
-
56
-
-
79956141898
-
Subversion of the actin cytoskeleton during viral infection
-
Taylor MP, Koyuncu OO, Enquist LW. 2011. Subversion of the actin cytoskeleton during viral infection. Nat Rev Microbiol 9:427-439. https://doi.org/10.1038/nrmicro2574.
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 427-439
-
-
Taylor, M.P.1
Koyuncu, O.O.2
Enquist, L.W.3
-
57
-
-
0035031922
-
Herpesvirus lytic replication and the cell cycle: Arresting new developments
-
Flemington EK. 2001. Herpesvirus lytic replication and the cell cycle: arresting new developments. J Virol 75:4475-4481. https://doi.org/10.1128/JVI.75.10.4475-4481.2001.
-
(2001)
J Virol
, vol.75
, pp. 4475-4481
-
-
Flemington, E.K.1
-
58
-
-
84945231548
-
Remote activation of host cell DNA synthesis in uninfected cells signaled by infected cells in advance of virus transmission
-
Schmidt N, Hennig T, Serwa RA, Marchetti M, O’Hare P. 2015. Remote activation of host cell DNA synthesis in uninfected cells signaled by infected cells in advance of virus transmission. J Virol 89:11107-11115. https://doi.org/10.1128/JVI.01950-15.
-
(2015)
J Virol
, vol.89
, pp. 11107-11115
-
-
Schmidt, N.1
Hennig, T.2
Serwa, R.A.3
Marchetti, M.4
O’Hare, P.5
-
59
-
-
0015076210
-
Deoxyribonucleic acid synthesis in synchronized mammalian KB cells infected with herpes simplex virus
-
Cohen GH, Vaughan RK, Lawrence WC. 1971. Deoxyribonucleic acid synthesis in synchronized mammalian KB cells infected with herpes simplex virus. J Virol 7:783-791.
-
(1971)
J Virol
, vol.7
, pp. 783-791
-
-
Cohen, G.H.1
Vaughan, R.K.2
Lawrence, W.C.3
-
60
-
-
33646203460
-
Cellular stress rather than stage of the cell cycle enhances the replication and plating efficiencies of herpessimplex virus type 1 ICP0_ viruses
-
Bringhurst RM, Schaffer PA. 2006. Cellular stress rather than stage of the cell cycle enhances the replication and plating efficiencies of herpessimplex virus type 1 ICP0_ viruses. J Virol 80:4528-4537. https://doi.org/10.1128/JVI.80.9.4528-4537.2006.
-
(2006)
J Virol
, vol.80
, pp. 4528-4537
-
-
Bringhurst, R.M.1
Schaffer, P.A.2
-
61
-
-
84923536650
-
Substrate recognition and function of the R2TP complex in response to cellular stress
-
von Morgen P, Hořejši Z, Macurek L. 2015. Substrate recognition and function of the R2TP complex in response to cellular stress. Front Genet 6:69. https://doi.org/10.3389/fgene.2015.00069.
-
(2015)
Front Genet
, vol.6
, pp. 69
-
-
Von Morgen, P.1
Hořejši, Z.2
Macurek, L.3
-
62
-
-
43949120109
-
Herpes simplex virus virion host shutoff attenuates establishment of the antiviral state
-
Pasieka TJ, Lu B, Crosby SD, Wylie KM, Morrison LA, Alexander DE, Menachery VD, Leib DA. 2008. Herpes simplex virus virion host shutoff attenuates establishment of the antiviral state. J Virol 82:5527-5535. https://doi.org/10.1128/JVI.02047-07.
-
(2008)
J Virol
, vol.82
, pp. 5527-5535
-
-
Pasieka, T.J.1
Lu, B.2
Crosby, S.D.3
Wylie, K.M.4
Morrison, L.A.5
Alexander, D.E.6
Menachery, V.D.7
Leib, D.A.8
-
63
-
-
84888048397
-
Herpes simplex virus 1 counteracts tetherin restriction via its virion host shutoff activity
-
Zenner HL, Mauricio R, Banting G, Crump CM. 2013. Herpes simplex virus 1 counteracts tetherin restriction via its virion host shutoff activity. J Virol 87:13115-13123. https://doi.org/10.1128/JVI.02167-13.
-
(2013)
J Virol
, vol.87
, pp. 13115-13123
-
-
Zenner, H.L.1
Mauricio, R.2
Banting, G.3
Crump, C.M.4
-
64
-
-
35748967921
-
A novel member of the SAF (Scaffold attachment factor)-box protein family inhibits gene expression and induces apoptosis
-
Chan CW, Lee Y-B, Uney J, Flynn A, Tobias JH, Norman M. 2007. A novel member of the SAF (scaffold attachment factor)-box protein family inhibits gene expression and induces apoptosis. Biochem J 407:355-362. https://doi.org/10.1042/BJ20070170.
-
(2007)
Biochem J
, vol.407
, pp. 355-362
-
-
Chan, C.W.1
Lee, Y.-B.2
Uney, J.3
Flynn, A.4
Tobias, J.H.5
Norman, M.6
-
65
-
-
2642616195
-
SAF-B protein couples transcription and pre-mRNA splicing to SAR/MAR elements
-
Nayler O, Stratling W, Bourquin JP, Stagljar I, Lindemann L, Jasper H, Hartmann AM, Fackelmayer FO, Ullrich A, Stamm S. 1998. SAF-B protein couples transcription and pre-mRNA splicing to SAR/MAR elements. Nucleic Acids Res 26:3542-3549. https://doi.org/10.1093/nar/26.15.3542.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 3542-3549
-
-
Nayler, O.1
Stratling, W.2
Bourquin, J.P.3
Stagljar, I.4
Lindemann, L.5
Jasper, H.6
Hartmann, A.M.7
Fackelmayer, F.O.8
Ullrich, A.9
Stamm, S.10
-
66
-
-
84951786426
-
ICLIP identifies novel roles for SAFB1 in regulating RNA processing and neuronal function
-
Rivers C, Idris J, Scott H, Rogers M, Lee Y-B, Gaunt J, Phylactou L, Curk T, Campbell C, Ule J, Norman M, Uney JB. 2015. iCLIP identifies novel roles for SAFB1 in regulating RNA processing and neuronal function. BMC Biol 13:111. https://doi.org/10.1186/s12915-015-0220-7.
-
(2015)
BMC Biol
, vol.13
, pp. 111
-
-
Rivers, C.1
Idris, J.2
Scott, H.3
Rogers, M.4
Lee, Y.-B.5
Gaunt, J.6
Phylactou, L.7
Curk, T.8
Campbell, C.9
Ule, J.10
Norman, M.11
Uney, J.B.12
-
67
-
-
84958624251
-
Nuclear m6A reader YTHDC1 regulates mRNA splicing
-
Xiao W, Adhikari S, Dahal U, Chen Y-S, Hao Y-J, Sun B-F, Sun H-Y, Li A, Ping X-L, Lai W-Y, Wang X, Ma H-L, Huang C-M, Yang Y, Huang N, Jiang G-B, Wang H-L, Zhou Q, Wang X-J, Zhao Y-L, Yang Y-G. 2016. Nuclear m6A reader YTHDC1 regulates mRNA splicing. Mol Cell 61:507-519. https://doi.org/10.1016/j.molcel.2016.01.012.
-
(2016)
Mol Cell
, vol.61
, pp. 507-519
-
-
Xiao, W.1
Adhikari, S.2
Dahal, U.3
Chen, Y.-S.4
Hao, Y.-J.5
Sun, B.-F.6
Sun, H.-Y.7
Li, A.8
Ping, X.-L.9
Lai, W.-Y.10
Wang, X.11
Ma, H.-L.12
Huang, C.-M.13
Yang, Y.14
Huang, N.15
Jiang, G.-B.16
Wang, H.-L.17
Zhou, Q.18
Wang, X.-J.19
Zhao, Y.-L.20
Yang, Y.-G.21
more..
-
68
-
-
84929355793
-
Systematic discovery of Xist RNA binding proteins
-
Chu C, Zhang QC, da Rocha ST, Flynn RA, Bharadwaj M, Calabrese JM, Magnuson T, Heard E, Chang HY. 2015. Systematic discovery of Xist RNA binding proteins. Cell 161:404-416. https://doi.org/10.1016/j.cell.2015.03.025.
-
(2015)
Cell
, vol.161
, pp. 404-416
-
-
Chu, C.1
Zhang, Q.C.2
Da Rocha, S.T.3
Flynn, R.A.4
Bharadwaj, M.5
Calabrese, J.M.6
Magnuson, T.7
Heard, E.8
Chang, H.Y.9
-
69
-
-
0033015180
-
A novel hnRNP protein (HAP/SAF-B) enters a subset of hnRNP complexes and relocates in nuclear granules in response to heat shock
-
Weighardt F, Cobianchi F, Cartegni L, Chiodi I, Villa A, Riva S, Biamonti G. 1999. A novel hnRNP protein (HAP/SAF-B) enters a subset of hnRNP complexes and relocates in nuclear granules in response to heat shock. J Cell Sci 112:1465-1476.
-
(1999)
J Cell Sci
, vol.112
, pp. 1465-1476
-
-
Weighardt, F.1
Cobianchi, F.2
Cartegni, L.3
Chiodi, I.4
Villa, A.5
Riva, S.6
Biamonti, G.7
-
70
-
-
0028029752
-
Herpes simplex virus inhibits host cell splicing, and regulatory protein ICP27 is required for this effect
-
Hardy WR, Sandri-Goldin RM. 1994. Herpes simplex virus inhibits host cell splicing, and regulatory protein ICP27 is required for this effect. J Virol 68:7790-7799.
-
(1994)
J Virol
, vol.68
, pp. 7790-7799
-
-
Hardy, W.R.1
Sandri-Goldin, R.M.2
-
71
-
-
0036067973
-
Splicing inhibition at the level of spliceosome assembly in the presence of herpes simplex virus protein ICP27
-
Lindberg A, Kreivi J-P. 2002. Splicing inhibition at the level of spliceosome assembly in the presence of herpes simplex virus protein ICP27. Virology 294:189-198. https://doi.org/10.1006/viro.2001.1301.
-
(2002)
Virology
, vol.294
, pp. 189-198
-
-
Lindberg, A.1
Kreivi, J.-P.2
-
72
-
-
0037387122
-
ICP27 interacts with SRPK1 to mediate HSV splicing inhibition by altering SR protein phosphorylation
-
Sciabica KS, Dai QJ, Sandri-Goldin RM. 2003. ICP27 interacts with SRPK1 to mediate HSV splicing inhibition by altering SR protein phosphorylation. EMBO J 22:1608-1619. https://doi.org/10.1093/emboj/cdg166.
-
(2003)
EMBO J
, vol.22
, pp. 1608-1619
-
-
Sciabica, K.S.1
Dai, Q.J.2
Sandri-Goldin, R.M.3
-
73
-
-
84930225632
-
Widespread disruption of host transcription termination in HSV-1 infection
-
Rutkowski AJ, Erhard F, L’Hernault A, Bonfert T, Schilhabel M, Crump C, Rosenstiel P, Efstathiou S, Zimmer R, Friedel CC, Dolken L. 2015. Widespread disruption of host transcription termination in HSV-1 infection. Nat Commun 6:7126. https://doi.org/10.1038/ncomms8126.
-
(2015)
Nat Commun
, vol.6
, pp. 7126
-
-
Rutkowski, A.J.1
Erhard, F.2
L’Hernault, A.3
Bonfert, T.4
Schilhabel, M.5
Crump, C.6
Rosenstiel, P.7
Efstathiou, S.8
Zimmer, R.9
Friedel, C.C.10
Dolken, L.11
-
74
-
-
84860779086
-
Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq
-
Dominissini D, Moshitch-Moshkovitz S, Schwartz S, Salmon-Divon M, Ungar L, Osenberg S, Cesarkas K, Jacob-Hirsch J, Amariglio N, Kupiec M, Sorek R, Rechavi G. 2012. Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq. Nature 485:201-206. https://doi.org/10.1038/nature11112.
-
(2012)
Nature
, vol.485
, pp. 201-206
-
-
Dominissini, D.1
Moshitch-Moshkovitz, S.2
Schwartz, S.3
Salmon-Divon, M.4
Ungar, L.5
Osenberg, S.6
Cesarkas, K.7
Jacob-Hirsch, J.8
Amariglio, N.9
Kupiec, M.10
Sorek, R.11
Rechavi, G.12
-
75
-
-
84862649489
-
Comprehensive analysis of mRNA methylation reveals enrichment in 3= UTRs and near stop codons
-
Meyer KD, Saletore Y, Zumbo P, Elemento O, Mason CE, Jaffrey SR. 2012. Comprehensive analysis of mRNA methylation reveals enrichment in 3= UTRs and near stop codons. Cell 149:1635-1646. https://doi.org/10.1016/j.cell.2012.05.003.
-
(2012)
Cell
, vol.149
, pp. 1635-1646
-
-
Meyer, K.D.1
Saletore, Y.2
Zumbo, P.3
Elemento, O.4
Mason, C.E.5
Jaffrey, S.R.6
-
76
-
-
0022978685
-
Isolation and characterization of a herpes simplex virus type 1 mutant containing a deletion within the gene encoding the immediate early polypeptide Vmw110
-
Stow ND, Stow EC. 1986. Isolation and characterization of a herpes simplex virus type 1 mutant containing a deletion within the gene encoding the immediate early polypeptide Vmw110. J Gen Virol 67: 2571-2585. https://doi.org/10.1099/0022-1317-67-12-2571.
-
(1986)
J Gen Virol
, vol.67
, pp. 2571-2585
-
-
Stow, N.D.1
Stow, E.C.2
-
77
-
-
85008912335
-
Histone deacetylase inhibitors reduce the number of herpes simplex virus-1 genomes initiating expression in individual cells
-
Shapira L, Ralph M, Tomer E, Cohen S, Kobiler O. 2016. Histone deacetylase inhibitors reduce the number of herpes simplex virus-1 genomes initiating expression in individual cells. Front Microbiol 7:1970. https://doi.org/10.3389/fmicb.2016.01970.
-
(2016)
Front Microbiol
, vol.7
, pp. 1970
-
-
Shapira, L.1
Ralph, M.2
Tomer, E.3
Cohen, S.4
Kobiler, O.5
-
78
-
-
33745391854
-
Dynamic proteomics in individual human cells uncovers widespread cell cycle dependence of nuclear proteins
-
Sigal A, Milo R, Cohen A, Geva-Zatorsky N, Klein Y, Alaluf I, Swerdlin N, Perzov N, Danon T, Liron Y, Raveh T, Carpenter AE, Lahav G, Alon U. 2006. Dynamic proteomics in individual human cells uncovers widespread cell cycle dependence of nuclear proteins. Nat Methods 3:525-531. https://doi.org/10.1038/nmeth892.
-
(2006)
Nat Methods
, vol.3
, pp. 525-531
-
-
Sigal, A.1
Milo, R.2
Cohen, A.3
Geva-Zatorsky, N.4
Klein, Y.5
Alaluf, I.6
Swerdlin, N.7
Perzov, N.8
Danon, T.9
Liron, Y.10
Raveh, T.11
Carpenter, A.E.12
Lahav, G.13
Alon, U.14
|