-
1
-
-
55949117839
-
Phylotypes related to Ruminococcus bromii are abundant in the large bowel of humans and increase in response to a diet high in resistant starch
-
Abell, G. C. J., Cooke, C. M., Bennett, C. N., Conlon, M. A., and McOrist, A. L. (2008). Phylotypes related to Ruminococcus bromii are abundant in the large bowel of humans and increase in response to a diet high in resistant starch. FEMS Microbiol. Ecol. 66, 505-515. doi: 10.1111/j.1574-6941.2008.00527.x
-
(2008)
FEMS Microbiol. Ecol
, vol.66
, pp. 505-515
-
-
Abell, G.C.J.1
Cooke, C.M.2
Bennett, C.N.3
Conlon, M.A.4
McOrist, A.L.5
-
2
-
-
84895072373
-
Resistant starch: promise for improving human health
-
Birt, D. F., Boylston, T., Hendrich, S., Jane, J. L., Hollis, J., Li, L., et al. (2013). Resistant starch: promise for improving human health. Adv. Nutr. 4, 587-601. doi: 10.3945/an.113.004325
-
(2013)
Adv. Nutr
, vol.4
, pp. 587-601
-
-
Birt, D.F.1
Boylston, T.2
Hendrich, S.3
Jane, J.L.4
Hollis, J.5
Li, L.6
-
3
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., et al. (2010). QIIME allows analysis of high-throughput community sequencing data. Nat. Methods 7, 335-336. doi: 10.1038/nmeth.f.303
-
(2010)
Nat. Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
-
4
-
-
84910623626
-
Respiratory patterns reflect different levels of aggressiveness and emotionality in Wild-type Groningen rats
-
Carnevali, L., Nalivaiko, E., and Sgoifo, A. (2014). Respiratory patterns reflect different levels of aggressiveness and emotionality in Wild-type Groningen rats. Respir. Physiol. Neurobiol. 204, 28-35. doi: 10.1016/j.resp.2014.07.003
-
(2014)
Respir. Physiol. Neurobiol
, vol.204
, pp. 28-35
-
-
Carnevali, L.1
Nalivaiko, E.2
Sgoifo, A.3
-
5
-
-
85021359994
-
Targeting the gut microbiota with inulin-type fructans: preclinical demonstration of a novel approach in the management of endothelial dysfunction
-
[Epub ahead of print]
-
Catry, E., Bindels, L. B., Tailleux, A., Lestavel, S., Neyrinck, A. M., Goossens, J. F., et al. (2017). Targeting the gut microbiota with inulin-type fructans: preclinical demonstration of a novel approach in the management of endothelial dysfunction. Gut doi: 10.1136/gutjnl-2016-313316 [Epub ahead of print]
-
(2017)
Gut
-
-
Catry, E.1
Bindels, L.B.2
Tailleux, A.3
Lestavel, S.4
Neyrinck, A.M.5
Goossens, J.F.6
-
6
-
-
80052365606
-
Pathobionts of the gastrointestinal microbiota and inflammatory disease
-
Chow, J., Tang, H., and Mazmanian, S. K. (2011). Pathobionts of the gastrointestinal microbiota and inflammatory disease. Curr. Opin. Immunol. 23, 473-480. doi: 10.1016/j.coi.2011.07.010
-
(2011)
Curr. Opin. Immunol
, vol.23
, pp. 473-480
-
-
Chow, J.1
Tang, H.2
Mazmanian, S.K.3
-
7
-
-
84979556395
-
Polysaccharide degradation by the intestinal microbiota and its influence on human health and disease
-
Cockburn, D. W., and Koropatkin, N. M. (2016). Polysaccharide degradation by the intestinal microbiota and its influence on human health and disease. J. Mol. Biol. 428, 3230-3252. doi: 10.1016/j.jmb.2016.06.021
-
(2016)
J. Mol. Biol
, vol.428
, pp. 3230-3252
-
-
Cockburn, D.W.1
Koropatkin, N.M.2
-
8
-
-
84919795588
-
The impact of diet and lifestyle on gut microbiota and human health
-
Conlon, M. A., and Bird, A. R. (2014). The impact of diet and lifestyle on gut microbiota and human health. Nutrients 7, 17-44. doi: 10.3390/nu7010017
-
(2014)
Nutrients
, vol.7
, pp. 17-44
-
-
Conlon, M.A.1
Bird, A.R.2
-
9
-
-
84874788960
-
Challenges and implications for biomedical research and intervention studies in older populations: insights from the ELDERMET study
-
Cusack, S., O'Toole, P. W., and Eldermet consortium (2013). Challenges and implications for biomedical research and intervention studies in older populations: insights from the ELDERMET study. Gerontology 59, 114-121. doi: 10.1159/000343158
-
(2013)
Gerontology
, vol.59
, pp. 114-121
-
-
Cusack, S.1
O'Toole, P.W.2
-
10
-
-
85018271791
-
Gut microbiota modulation and its relationship with obesity using prebiotic fibers and probiotics: a review
-
Dahiya, D. K., Renuka, Puniya, M., Shandilya, U. K., Dhewa, T., Kumar, N., et al. (2017). Gut microbiota modulation and its relationship with obesity using prebiotic fibers and probiotics: a review. Front. Microbiol. 8:563. doi: 10.3389/fmicb.2017.00563
-
(2017)
Front. Microbiol
, vol.8
, pp. 563
-
-
Dahiya, D.K.1
Renuka Puniya, M.2
Shandilya, U.K.3
Dhewa, T.4
Kumar, N.5
-
11
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar, R. C. (2010). Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26, 2460-2461. doi: 10.1093/bioinformatics/btq461
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
12
-
-
84864579031
-
Microbial co-occurrence relationships in the human microbiome
-
Faust, K., Sathirapongsasuti, J. F., Izard, J., Segata, N., Gevers, D., Raes, J., et al. (2012). Microbial co-occurrence relationships in the human microbiome. PLOS Comput. Biol. 8:e1002606. doi: 10.1371/journal.pcbi.1002606
-
(2012)
PLOS Comput. Biol
, vol.8
-
-
Faust, K.1
Sathirapongsasuti, J.F.2
Izard, J.3
Segata, N.4
Gevers, D.5
Raes, J.6
-
13
-
-
84873724959
-
The type and quantity of dietary fat and carbohydrate alter faecal microbiome and short-chain fatty acid excretion in a metabolic syndrome 'at-risk' population
-
Fava, F., Gitau, R., Griffin, B. A., Gibson, G. R., Tuohy, K. M., and Lovegrove, J. A. (2013). The type and quantity of dietary fat and carbohydrate alter faecal microbiome and short-chain fatty acid excretion in a metabolic syndrome 'at-risk' population. Int. J. Obes. 37, 216-223. doi: 10.1038/ijo.2012.33
-
(2013)
Int. J. Obes
, vol.37
, pp. 216-223
-
-
Fava, F.1
Gitau, R.2
Griffin, B.A.3
Gibson, G.R.4
Tuohy, K.M.5
Lovegrove, J.A.6
-
14
-
-
85027283029
-
Expert consensus document: The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics
-
Gibson, G. R., Hutkins, R., Sanders, M. E., Prescott, S. L., Reimer, R. A., Salminen, S. J., et al. (2017). Expert consensus document: The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics. Nat. Rev. Gastroenterol. Hepatol. 14, 491-502. doi: 10.1038/nrgastro.2017.75
-
(2017)
Nat. Rev. Gastroenterol. Hepatol
, vol.14
, pp. 491-502
-
-
Gibson, G.R.1
Hutkins, R.2
Sanders, M.E.3
Prescott, S.L.4
Reimer, R.A.5
Salminen, S.J.6
-
15
-
-
12744273405
-
Dietary modulation of the human colonic microbiota: updating the concept of prebiotics
-
Gibson, G. R., Probert, H. M., Loo, J. V., Rastall, R. A., and Roberfroid, M. B. (2004). Dietary modulation of the human colonic microbiota: updating the concept of prebiotics. Nutr. Res. Rev. 17, 259-275. doi: 10.1079/NRR200479
-
(2004)
Nutr. Res. Rev
, vol.17
, pp. 259-275
-
-
Gibson, G.R.1
Probert, H.M.2
Loo, J.V.3
Rastall, R.A.4
Roberfroid, M.B.5
-
16
-
-
0029013322
-
Dietary modulation of the human colonic microbiota: introducing the concept of prebiotics
-
Gibson, G. R., and Roberfroid, M. B. (1995). Dietary modulation of the human colonic microbiota: introducing the concept of prebiotics. J. Nutr. 125, 1401-1412
-
(1995)
J. Nutr
, vol.125
, pp. 1401-1412
-
-
Gibson, G.R.1
Roberfroid, M.B.2
-
17
-
-
84994682245
-
Obese ZDF rats fermented resistant starch with effects on gut microbiota but no reduction in abdominal fat
-
Goldsmith, F., Guice, J., Page, R., Welsh, D. A., Taylor, C. M., Blanchard, E. E., et al. (2017). Obese ZDF rats fermented resistant starch with effects on gut microbiota but no reduction in abdominal fat. Mol. Nutr. Food Res. 61:1501025 doi: 10.1002/mnfr.201501025
-
(2017)
Mol. Nutr. Food Res
, vol.61
-
-
Goldsmith, F.1
Guice, J.2
Page, R.3
Welsh, D.A.4
Taylor, C.M.5
Blanchard, E.E.6
-
18
-
-
84938846796
-
Contribution of diet to the composition of the human gut microbiota
-
Graf, D., Di Cagno, R., Fak, F., Flint, H. J., Nyman, M., Saarela, M., et al. (2015). Contribution of diet to the composition of the human gut microbiota. Microb. Ecol. Health Dis. 26:26164. doi: 10.3402/mehd.v26.26164
-
(2015)
Microb. Ecol. Health Dis
, vol.26
, pp. 26164
-
-
Graf, D.1
Di Cagno, R.2
Fak, F.3
Flint, H.J.4
Nyman, M.5
Saarela, M.6
-
19
-
-
84959421404
-
Apple-derived pectin modulates gut microbiota, improves gut barrier function, and attenuates metabolic endotoxemia in rats with diet-induced obesity
-
Jiang, T., Gao, X., Wu, C., Tian, F., Lei, Q., Bi, J., et al. (2016). Apple-derived pectin modulates gut microbiota, improves gut barrier function, and attenuates metabolic endotoxemia in rats with diet-induced obesity. Nutrients 8:126. doi: 10.3390/nu8030126
-
(2016)
Nutrients
, vol.8
, pp. 126
-
-
Jiang, T.1
Gao, X.2
Wu, C.3
Tian, F.4
Lei, Q.5
Bi, J.6
-
20
-
-
84910661497
-
Characterization of citrus pectin samples extracted under different conditions: influence of acid type and pH of extraction
-
Kaya, M., Sousa, A. G., Crepeau, M. J., Sorensen, S. O., and Ralet, M. C. (2014). Characterization of citrus pectin samples extracted under different conditions: influence of acid type and pH of extraction. Ann. Bot. 114, 1319-1326. doi: 10.1093/aob/mcu150
-
(2014)
Ann. Bot
, vol.114
, pp. 1319-1326
-
-
Kaya, M.1
Sousa, A.G.2
Crepeau, M.J.3
Sorensen, S.O.4
Ralet, M.C.5
-
21
-
-
84992745692
-
Consumption of dietary resistant starch partially corrected the growth pattern despite hyperglycemia and compromised kidney function in streptozotocin-induced diabetic rats
-
Koh, G. Y., Rowling, M. J., Schalinske, K. L., Grapentine, K., and Loo, Y. T. (2016). Consumption of dietary resistant starch partially corrected the growth pattern despite hyperglycemia and compromised kidney function in streptozotocin-induced diabetic rats. J. Agric. Food Chem. 64, 7540-7545. doi: 10.1021/acs.jafc.6b03808
-
(2016)
J. Agric. Food Chem
, vol.64
, pp. 7540-7545
-
-
Koh, G.Y.1
Rowling, M.J.2
Schalinske, K.L.3
Grapentine, K.4
Loo, Y.T.5
-
22
-
-
84994399678
-
Culture of previously uncultured members of the human gut microbiota by culturomics
-
Lagier, J. C., Khelaifia, S., Alou, M. T., Ndongo, S., Dione, N., Hugon, P., et al. (2016). Culture of previously uncultured members of the human gut microbiota by culturomics. Nat. Microbiol. 1, 16203. doi: 10.1038/Nmicrobiol.2016.203
-
(2016)
Nat. Microbiol
, vol.1
, pp. 16203
-
-
Lagier, J.C.1
Khelaifia, S.2
Alou, M.T.3
Ndongo, S.4
Dione, N.5
Hugon, P.6
-
23
-
-
84905408730
-
Effects of diet on gut microbiota profile and the implications for health and disease
-
Lee, Y. K. (2013). Effects of diet on gut microbiota profile and the implications for health and disease. Biosci. Microbiota Food Health 32, 1-12. doi: 10.12938/bmfh.32.1
-
(2013)
Biosci. Microbiota Food Health
, vol.32
, pp. 1-12
-
-
Lee, Y.K.1
-
24
-
-
84855717953
-
Cultured representatives of two major phylogroups of human colonic Faecalibacterium prausnitzii can utilize pectin, uronic acids, and host-derived substrates for growth
-
Lopez-Siles, M., Khan, T. M., Duncan, S. H., Harmsen, H. J. M., Garcia-Gil, L. J., and Flint, H. J. (2012). Cultured representatives of two major phylogroups of human colonic Faecalibacterium prausnitzii can utilize pectin, uronic acids, and host-derived substrates for growth. Appl. Environ. Microbiol. 78, 420-428. doi: 10.1128/Aem.06858-11
-
(2012)
Appl. Environ. Microbiol
, vol.78
, pp. 420-428
-
-
Lopez-Siles, M.1
Khan, T.M.2
Duncan, S.H.3
Harmsen, H.J.M.4
Garcia-Gil, L.J.5
Flint, H.J.6
-
25
-
-
29144464937
-
UniFrac: a new phylogenetic method for comparing microbial communities
-
Lozupone, C., and Knight, R. (2005). UniFrac: a new phylogenetic method for comparing microbial communities. Appl. Environ. Microbiol. 71, 8228-8235. doi: 10.1128/Aem.71.12.8228-8235.2005
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 8228-8235
-
-
Lozupone, C.1
Knight, R.2
-
26
-
-
84855173898
-
Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts
-
Martens, E. C., Lowe, E. C., Chiang, H., Pudlo, N. A., Wu, M., McNulty, N. P., et al. (2011). Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts. PLOS Biol. 9:e1001221. doi: 10.1371/journal.pbio.1001221
-
(2011)
PLOS Biol
, vol.9
-
-
Martens, E.C.1
Lowe, E.C.2
Chiang, H.3
Pudlo, N.A.4
Wu, M.5
McNulty, N.P.6
-
27
-
-
85027954250
-
The human gut microbiota and its interactive connections to diet
-
Milani, C., Ferrario, C., Turroni, F., Duranti, S., Mangifesta, M., van Sinderen, D., et al. (2016). The human gut microbiota and its interactive connections to diet. J. Hum. Nutr. Diet. 29, 539-546. doi: 10.1111/jhn.12371
-
(2016)
J. Hum. Nutr. Diet
, vol.29
, pp. 539-546
-
-
Milani, C.1
Ferrario, C.2
Turroni, F.3
Duranti, S.4
Mangifesta, M.5
van Sinderen, D.6
-
28
-
-
84880286399
-
Assessing the fecal microbiota: an optimized ion torrent 16S rRNA gene-based analysis protocol
-
Milani, C., Hevia, A., Foroni, E., Duranti, S., Turroni, F., Lugli, G. A., et al. (2013). Assessing the fecal microbiota: an optimized ion torrent 16S rRNA gene-based analysis protocol. PLOS ONE 8:e68739. doi: 10.1371/journal.pone.0068739
-
(2013)
PLOS ONE
, vol.8
-
-
Milani, C.1
Hevia, A.2
Foroni, E.3
Duranti, S.4
Turroni, F.5
Lugli, G.A.6
-
29
-
-
84938323947
-
Description of a novel pectin-degrading bacterial species Prevotella pectinovora sp nov., based on its phenotypic and genomic traits
-
Nograsek, B., Accetto, T., Fanedl, L., and Avgutin, G. (2015). Description of a novel pectin-degrading bacterial species Prevotella pectinovora sp nov., based on its phenotypic and genomic traits. J. Microbiol. 53, 503-510. doi: 10.1007/s12275-015-5142-0
-
(2015)
J. Microbiol
, vol.53
, pp. 503-510
-
-
Nograsek, B.1
Accetto, T.2
Fanedl, L.3
Avgutin, G.4
-
30
-
-
84956937938
-
The effect of dietary resistant starch type 2 on the microbiota and markers of gut inflammation in rural Malawi children
-
Ordiz, M. I., May, T. D., Mihindukulasuriya, K., Martin, J., Crowley, J., Tarr, P. I., et al. (2015). The effect of dietary resistant starch type 2 on the microbiota and markers of gut inflammation in rural Malawi children. Microbiome 3, 37. doi: 10.1186/s40168-015-0102-9
-
(2015)
Microbiome
, vol.3
, pp. 37
-
-
Ordiz, M.I.1
May, T.D.2
Mihindukulasuriya, K.3
Martin, J.4
Crowley, J.5
Tarr, P.I.6
-
31
-
-
84955070529
-
Hydrolysed inulin alleviates the azoxymethane-induced preneoplastic aberrant crypt foci by altering selected intestinal microbiota in Sprague-Dawley rats
-
Pattananandecha, T., Sirilun, S., Duangjitcharoen, Y., Sivamaruthi, B. S., Suwannalert, P., Peerajan, S., et al. (2016). Hydrolysed inulin alleviates the azoxymethane-induced preneoplastic aberrant crypt foci by altering selected intestinal microbiota in Sprague-Dawley rats. Pharm. Biol. 54, 1596-1605. doi: 10.3109/13880209.2015.1110597
-
(2016)
Pharm. Biol
, vol.54
, pp. 1596-1605
-
-
Pattananandecha, T.1
Sirilun, S.2
Duangjitcharoen, Y.3
Sivamaruthi, B.S.4
Suwannalert, P.5
Peerajan, S.6
-
32
-
-
70449713952
-
The NIH human microbiome project
-
Peterson, J., Garges, S., Giovanni, M., McInnes, P., Wang, L., Schloss, J. A., et al. (2009). The NIH human microbiome project. Genome Res. 19, 2317-2323. doi: 10.1101/gr.096651.109
-
(2009)
Genome Res
, vol.19
, pp. 2317-2323
-
-
Peterson, J.1
Garges, S.2
Giovanni, M.3
McInnes, P.4
Wang, L.5
Schloss, J.A.6
-
33
-
-
84873739311
-
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
-
Quast, C., Pruesse, E., Yilmaz, P., Gerken, J., Schweer, T., Yarza, P., et al. (2013). The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res. 41, D590-D596. doi: 10.1093/nar/gks1219
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D590-D596
-
-
Quast, C.1
Pruesse, E.2
Yilmaz, P.3
Gerken, J.4
Schweer, T.5
Yarza, P.6
-
34
-
-
84927692256
-
The first 1000 cultured species of the human gastrointestinal microbiota
-
Rajilic-Stojanovic, M., and de Vos, W. M. (2014). The first 1000 cultured species of the human gastrointestinal microbiota. FEMS Microbiol. Rev. 38, 996-1047. doi: 10.1111/1574-6976.12075
-
(2014)
FEMS Microbiol. Rev
, vol.38
, pp. 996-1047
-
-
Rajilic-Stojanovic, M.1
de Vos, W.M.2
-
35
-
-
63849164050
-
Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii
-
Ramirez-Farias, C., Slezak, K., Fuller, Z., Duncan, A., Holtrop, G., and Louis, P. (2009). Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii. Br. J. Nutr. 101, 541-550. doi: 10.1017/S0007114508019880
-
(2009)
Br. J. Nutr
, vol.101
, pp. 541-550
-
-
Ramirez-Farias, C.1
Slezak, K.2
Fuller, Z.3
Duncan, A.4
Holtrop, G.5
Louis, P.6
-
36
-
-
84911468165
-
Recent developments in prebiotics to selectively impact beneficial microbes and promote intestinal health
-
Rastall, R. A., and Gibson, G. R. (2015). Recent developments in prebiotics to selectively impact beneficial microbes and promote intestinal health. Curr. Opin. Biotechnol. 32, 42-46. doi: 10.1016/j.copbio.2014.11.002
-
(2015)
Curr. Opin. Biotechnol
, vol.32
, pp. 42-46
-
-
Rastall, R.A.1
Gibson, G.R.2
-
37
-
-
84901251583
-
Phylogenetic distribution of three pathways for propionate production within the human gut microbiota
-
Reichardt, N., Duncan, S. H., Young, P., Belenguer, A., Leitch, C. M., Scott, K. P., et al. (2014). Phylogenetic distribution of three pathways for propionate production within the human gut microbiota. ISME J. 8, 1323-1335. doi: 10.1038/ismej.2014.14
-
(2014)
ISME J
, vol.8
, pp. 1323-1335
-
-
Reichardt, N.1
Duncan, S.H.2
Young, P.3
Belenguer, A.4
Leitch, C.M.5
Scott, K.P.6
-
38
-
-
84992077605
-
Inulin supplementation lowered the metabolic defects of prolonged exposure to chlorpyrifos from gestation to young adult stage in offspring rats
-
Reygner, J., Lichtenberger, L., Elmhiri, G., Dou, S., Bahi-Jaber, N., Rhazi, L., et al. (2016). Inulin supplementation lowered the metabolic defects of prolonged exposure to chlorpyrifos from gestation to young adult stage in offspring rats. PLOS ONE 11:e0164614. doi: 10.1371/journal.pone.0164614
-
(2016)
PLOS ONE
, vol.11
-
-
Reygner, J.1
Lichtenberger, L.2
Elmhiri, G.3
Dou, S.4
Bahi-Jaber, N.5
Rhazi, L.6
-
39
-
-
84962195820
-
Intestinal short chain fatty acids and their link with diet and human health
-
Rios-Covian, D., Ruas-Madiedo, P., Margolles, A., Gueimonde, M., de los Reyes-Gavilan, C. G., and Salazar, N. (2016). Intestinal short chain fatty acids and their link with diet and human health. Front. Microbiol. 7:185. doi: 10.3389/Fmicb.2016.00185
-
(2016)
Front. Microbiol
, vol.7
, pp. 185
-
-
Rios-Covian, D.1
Ruas-Madiedo, P.2
Margolles, A.3
Gueimonde, M.4
de los Reyes-Gavilan, C.G.5
Salazar, N.6
-
40
-
-
78149272756
-
Prebiotic effects: metabolic and health benefits
-
Roberfroid, M., Gibson, G. R., Hoyles, L., McCartney, A. L., Rastall, R., Rowland, I., et al. (2010). Prebiotic effects: metabolic and health benefits. Br. J. Nutr. 104, S1-63. doi: 10.1017/S0007114510003363
-
(2010)
Br. J. Nutr
, vol.104
, pp. S1-63
-
-
Roberfroid, M.1
Gibson, G.R.2
Hoyles, L.3
McCartney, A.L.4
Rastall, R.5
Rowland, I.6
-
41
-
-
84861872173
-
Bacteroides sartorii is an earlier heterotypic synonym of Bacteroides chinchillae and has priority
-
Sakamoto, M., and Ohkuma, M. (2012). Bacteroides sartorii is an earlier heterotypic synonym of Bacteroides chinchillae and has priority. Int. J. Syst. Evol. Microbiol. 62, 1241-1244. doi: 10.1099/ijs.0.035659-0
-
(2012)
Int. J. Syst. Evol. Microbiol
, vol.62
, pp. 1241-1244
-
-
Sakamoto, M.1
Ohkuma, M.2
-
42
-
-
84876708253
-
Fiber and prebiotics: mechanisms and health benefits
-
Slavin, J. (2013). Fiber and prebiotics: mechanisms and health benefits. Nutrients 5, 1417-1435. doi: 10.3390/nu5041417
-
(2013)
Nutrients
, vol.5
, pp. 1417-1435
-
-
Slavin, J.1
-
43
-
-
84940568338
-
Probiotic Bifidobacterium longum alters gut luminal metabolism through modification of the gut microbial community
-
Sugahara, H., Odamaki, T., Fukuda, S., Kato, T., Xiao, J. Z., Abe, F., et al. (2015). Probiotic Bifidobacterium longum alters gut luminal metabolism through modification of the gut microbial community. Sci. Rep. 5:13548. doi: 10.1038/Srep13548
-
(2015)
Sci. Rep
, vol.5
, pp. 13548
-
-
Sugahara, H.1
Odamaki, T.2
Fukuda, S.3
Kato, T.4
Xiao, J.Z.5
Abe, F.6
-
44
-
-
3042523533
-
Dysbiosis as a prerequisite for IBD
-
Tamboli, C. P., Neut, C., Desreumaux, P., and Colombel, J. F. (2004). Dysbiosis as a prerequisite for IBD. Gut 53, 1057-1057
-
(2004)
Gut
, vol.53
, pp. 1057-1057
-
-
Tamboli, C.P.1
Neut, C.2
Desreumaux, P.3
Colombel, J.F.4
-
45
-
-
0001578469
-
Effects of administration of TOS and Bifidobacterium breve 4006 on the human faecal flora
-
Tanaka, R., Takayama, H., Morotomi, M., Kuroshima, T., Ueyama, T., Matsumoto, K., et al. (1983). Effects of administration of TOS and Bifidobacterium breve 4006 on the human faecal flora. Bifidobacteria Microflora 2, 17-24
-
(1983)
Bifidobacteria Microflora
, vol.2
, pp. 17-24
-
-
Tanaka, R.1
Takayama, H.2
Morotomi, M.3
Kuroshima, T.4
Ueyama, T.5
Matsumoto, K.6
-
46
-
-
80052841892
-
Microbial metabolomics
-
Tang, J. (2011). Microbial metabolomics. Curr. Genomics 12, 391-403. doi: 10.2174/138920211797248619
-
(2011)
Curr. Genomics
, vol.12
, pp. 391-403
-
-
Tang, J.1
-
47
-
-
85027942594
-
Effects of pectin supplementation on the fermentation patterns of different structural carbohydrates in rats
-
Tian, L., Scholte, J., Borewicz, K., van den Bogert, B., Smidt, H., Scheurink, A. J., et al. (2016). Effects of pectin supplementation on the fermentation patterns of different structural carbohydrates in rats. Mol. Nutr. Food Res. 60, 2256-2266. doi: 10.1002/mnfr.201600149
-
(2016)
Mol. Nutr. Food Res
, vol.60
, pp. 2256-2266
-
-
Tian, L.1
Scholte, J.2
Borewicz, K.3
van den Bogert, B.4
Smidt, H.5
Scheurink, A.J.6
-
48
-
-
84957831193
-
Deciphering bifidobacterial-mediated metabolic interactions and their impact on gut microbiota by a multi-omics approach
-
Turroni, F., Milani, C., Duranti, S., Mancabelli, L., Mangifesta, M., Viappiani, A., et al. (2016). Deciphering bifidobacterial-mediated metabolic interactions and their impact on gut microbiota by a multi-omics approach. ISME J. 10, 1656-1668. doi: 10.1038/ismej.2015.236
-
(2016)
ISME J
, vol.10
, pp. 1656-1668
-
-
Turroni, F.1
Milani, C.2
Duranti, S.3
Mancabelli, L.4
Mangifesta, M.5
Viappiani, A.6
-
49
-
-
45449098444
-
Human gut microbiota and bifidobacteria: from composition to functionality
-
Turroni, F., Ribbera, A., Foroni, E., van Sinderen, D., and Ventura, M. (2008). Human gut microbiota and bifidobacteria: from composition to functionality. Antonie Van Leeuwenhoek 94, 35-50. doi: 10.1007/s10482-008-9232-4
-
(2008)
Antonie Van Leeuwenhoek
, vol.94
, pp. 35-50
-
-
Turroni, F.1
Ribbera, A.2
Foroni, E.3
van Sinderen, D.4
Ventura, M.5
-
50
-
-
84938483135
-
Resistant starch diet induces change in the swine microbiome and a predominance of beneficial bacterial populations
-
Umu, O. C., Frank, J. A., Fangel, J. U., Oostindjer, M., da Silva, C. S., Bolhuis, E. J., et al. (2015). Resistant starch diet induces change in the swine microbiome and a predominance of beneficial bacterial populations. Microbiome 3, 16. doi: 10.1186/s40168-015-0078-5
-
(2015)
Microbiome
, vol.3
, pp. 16
-
-
Umu, O.C.1
Frank, J.A.2
Fangel, J.U.3
Oostindjer, M.4
da Silva, C.S.5
Bolhuis, E.J.6
-
51
-
-
80053652303
-
Arabinoxylans and inulin differentially modulate the mucosal and luminal gut microbiota and mucin-degradation in humanized rats
-
Van den Abbeele, P., Gerard, P., Rabot, S., Bruneau, A., El Aidy, S., Derrien, M., et al. (2011). Arabinoxylans and inulin differentially modulate the mucosal and luminal gut microbiota and mucin-degradation in humanized rats. Environ. Microbiol. 13, 2667-2680. doi: 10.1111/j.1462-2920.2011.02533.x
-
(2011)
Environ. Microbiol
, vol.13
, pp. 2667-2680
-
-
Van den Abbeele, P.1
Gerard, P.2
Rabot, S.3
Bruneau, A.4
El Aidy, S.5
Derrien, M.6
-
52
-
-
84886890138
-
Different human gut models reveal the distinct fermentation patterns of Arabinoxylan versus inulin
-
Van den Abbeele, P., Venema, K., Van de Wiele, T., Verstraete, W., and Possemiers, S. (2013). Different human gut models reveal the distinct fermentation patterns of Arabinoxylan versus inulin. J. Agric. Food Chem. 61, 9819-9827. doi: 10.1021/jf4021784
-
(2013)
J. Agric. Food Chem
, vol.61
, pp. 9819-9827
-
-
Van den Abbeele, P.1
Venema, K.2
Van Wiele, T.3
Verstraete, W.4
Possemiers, S.5
-
53
-
-
78751580602
-
Dominant and diet-responsive groups of bacteria within the human colonic microbiota
-
Walker, A. W., Ince, J., Duncan, S. H., Webster, L. M., Holtrop, G., Ze, X., et al. (2011). Dominant and diet-responsive groups of bacteria within the human colonic microbiota. ISME J. 5, 220-230. doi: 10.1038/ismej.2010.118
-
(2011)
ISME J
, vol.5
, pp. 220-230
-
-
Walker, A.W.1
Ince, J.2
Duncan, S.H.3
Webster, L.M.4
Holtrop, G.5
Ze, X.6
-
54
-
-
41449097785
-
Comparisons of diets used in animal models of high-fat feeding
-
Warden, C. H., and Fisler, J. S. (2008). Comparisons of diets used in animal models of high-fat feeding. Cell Metab. 7, 277-277. doi: 10.1016/j.cmet.2008.03.014
-
(2008)
Cell Metab
, vol.7
, pp. 277-277
-
-
Warden, C.H.1
Fisler, J.S.2
-
56
-
-
85014021507
-
Prebiotic inulin-type fructans and galacto-oligosaccharides: definition, specificity, function, and application in gastrointestinal disorders
-
Wilson, B., and Whelan, K. (2017). Prebiotic inulin-type fructans and galacto-oligosaccharides: definition, specificity, function, and application in gastrointestinal disorders. J. Gastroenterol. Hepatol. 32(Suppl. 1), 64-68. doi: 10.1111/jgh.13700
-
(2017)
J. Gastroenterol. Hepatol
, vol.32
, pp. 64-68
-
-
Wilson, B.1
Whelan, K.2
-
57
-
-
85027944984
-
Dietary effects on human gut microbiome diversity
-
Xu, Z. J., and Knight, R. (2015). Dietary effects on human gut microbiome diversity. Br. J. Nutr. 113, S1-S5. doi: 10.1017/S0007114514004127
-
(2015)
Br. J. Nutr
, vol.113
, pp. S1-S5
-
-
Xu, Z.J.1
Knight, R.2
-
58
-
-
84866150476
-
Changes in bowel microbiota induced by feeding weanlings resistant starch stimulate transcriptomic and physiological responses
-
Young, W., Roy, N. C., Lee, J., Lawley, B., Otter, D., Henderson, G., et al. (2012). Changes in bowel microbiota induced by feeding weanlings resistant starch stimulate transcriptomic and physiological responses. Appl. Environ. Microbiol. 78, 6656-6664. doi: 10.1128/Aem.01536-12
-
(2012)
Appl. Environ. Microbiol
, vol.78
, pp. 6656-6664
-
-
Young, W.1
Roy, N.C.2
Lee, J.3
Lawley, B.4
Otter, D.5
Henderson, G.6
-
59
-
-
84863990011
-
Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon
-
Ze, X. L., Duncan, S. H., Louis, P., and Flint, H. J. (2012). Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon. ISME J. 6, 1535-1543. doi: 10.1038/ismej.2012.4
-
(2012)
ISME J
, vol.6
, pp. 1535-1543
-
-
Ze, X.L.1
Duncan, S.H.2
Louis, P.3
Flint, H.J.4
|