-
1
-
-
0033578580
-
A comparison of the chemical characteristics of ocean DOM and extracellular DOM produced by marine algae
-
Aluwihare, L.I., and Repeta, D.J. (1999) A comparison of the chemical characteristics of ocean DOM and extracellular DOM produced by marine algae. Mar Ecol Prog Ser 186: 105–117.
-
(1999)
Mar Ecol Prog Ser
, vol.186
, pp. 105-117
-
-
Aluwihare, L.I.1
Repeta, D.J.2
-
2
-
-
0028450621
-
Rapid cycling of high-molecular-weight dissolved organic matter in the ocean
-
Amon, R.M., and Benner, R. (1994) Rapid cycling of high-molecular-weight dissolved organic matter in the ocean. Lett Nat 369: 549–552.
-
(1994)
Lett Nat
, vol.369
, pp. 549-552
-
-
Amon, R.M.1
Benner, R.2
-
3
-
-
0030052999
-
Bacterial utilization of different size classes of dissolved organic matter
-
Amon, R.M., and Benner, R. (1996) Bacterial utilization of different size classes of dissolved organic matter. Limnol Oceanogr 41: 41–51.
-
(1996)
Limnol Oceanogr
, vol.41
, pp. 41-51
-
-
Amon, R.M.1
Benner, R.2
-
4
-
-
18744362433
-
Posttranslational modifications in the CP43 subunit of photosystem II
-
Anderson, L.B., Maderia, M., Ouellette, A.J., Putnam-Evans, C., Higgins, L., Krick, T., et al. (2002) Posttranslational modifications in the CP43 subunit of photosystem II. Proc Natl Acad Sci USA 99: 14676–14681.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 14676-14681
-
-
Anderson, L.B.1
Maderia, M.2
Ouellette, A.J.3
Putnam-Evans, C.4
Higgins, L.5
Krick, T.6
-
5
-
-
84899490286
-
Phage infection of an environmentally relevant marine bacterium alters host metabolism and lysate composition
-
Ankrah, N.Y.D., May, A.L., Middleton, J.L., Jones, D.R., Hadden, M.K., Gooding, J.R., et al. (2014) Phage infection of an environmentally relevant marine bacterium alters host metabolism and lysate composition. ISME J 8: 1089–1100.
-
(2014)
ISME J
, vol.8
, pp. 1089-1100
-
-
Ankrah, N.Y.D.1
May, A.L.2
Middleton, J.L.3
Jones, D.R.4
Hadden, M.K.5
Gooding, J.R.6
-
6
-
-
78049521558
-
Metabolite identification in synechococcus sp. PCC 7002Using untargeted stable isotope assisted metabolite profiling
-
Baran, R., Bowen, B.P., Bouskill, N.J., Brodie, E.L., Yannone, S.M., and Northen, T.R. (2010) Metabolite identification in synechococcus sp. PCC 7002Using untargeted stable isotope assisted metabolite profiling. Anal Chem 82: 9034–9042.
-
(2010)
Anal Chem
, vol.82
, pp. 9034-9042
-
-
Baran, R.1
Bowen, B.P.2
Bouskill, N.J.3
Brodie, E.L.4
Yannone, S.M.5
Northen, T.R.6
-
7
-
-
80755125390
-
Untargeted metabolic footprinting reveals a surprising breadth of metabolite uptake and release by Synechococcus sp. PCC 7002
-
Baran, R., Bown, B.P., and Northen, T.R. (2011) Untargeted metabolic footprinting reveals a surprising breadth of metabolite uptake and release by Synechococcus sp. PCC 7002. Mol Biosyst 7: 3200–3206.
-
(2011)
Mol Biosyst
, vol.7
, pp. 3200-3206
-
-
Baran, R.1
Bown, B.P.2
Northen, T.R.3
-
8
-
-
77957860815
-
Evolutionary systems biology of amino acid biosynthetic cost in yeast
-
Barton, M.D., Delneri, D., Oliver, S.G., Rattray, M., and Bergman, C.M. (2010) Evolutionary systems biology of amino acid biosynthetic cost in yeast. PLoS ONE 5: e11935.
-
(2010)
PLoS ONE
, vol.5
-
-
Barton, M.D.1
Delneri, D.2
Oliver, S.G.3
Rattray, M.4
Bergman, C.M.5
-
9
-
-
84897945710
-
Closely related phytoplankton species produce similar suites of dissolved organic matter
-
Becker, J.W., Berube, P.M., Follett, C.L., Waterbury, J.B., Chrisholm, S.W., DeLong, E.F., and Repeta, D.J. (2014) Closely related phytoplankton species produce similar suites of dissolved organic matter. Front Microbiol 5: 1–14.
-
(2014)
Front Microbiol
, vol.5
, pp. 1-14
-
-
Becker, J.W.1
Berube, P.M.2
Follett, C.L.3
Waterbury, J.B.4
Chrisholm, S.W.5
DeLong, E.F.6
Repeta, D.J.7
-
10
-
-
64749088448
-
Time-resolved metabolic footprinting for nonlinear modeling of bacterial substrate utilization
-
Behrends, V., Ebbels, T.M.D., Williams, H.D., and Bundy, J.G. (2009) Time-resolved metabolic footprinting for nonlinear modeling of bacterial substrate utilization. Appl Environ Microbiol 75: 2453–2463.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 2453-2463
-
-
Behrends, V.1
Ebbels, T.M.D.2
Williams, H.D.3
Bundy, J.G.4
-
11
-
-
84975945825
-
Plant hormones in marine phytoplankton, zooplankton and seawater
-
Bentley, J.A. (1960) Plant hormones in marine phytoplankton, zooplankton and seawater. J Mar Biol Ass U.K. 39: 433–444.
-
(1960)
J Mar Biol Ass U.K.
, vol.39
, pp. 433-444
-
-
Bentley, J.A.1
-
12
-
-
0032426497
-
Carbohydrates in phytoplankton and freshly produced dissolved organic matter
-
Biersmith, A., and Benner, R. (1998) Carbohydrates in phytoplankton and freshly produced dissolved organic matter. Mar Chem 63: 131–144.
-
(1998)
Mar Chem
, vol.63
, pp. 131-144
-
-
Biersmith, A.1
Benner, R.2
-
13
-
-
0034802769
-
A novel method for the measurement of dissolved adenosine and guanosine triphosphate in aquatic habitats: applications to marine microbial ecology
-
Björkman, K.M., and Karl, D.M. (2001) A novel method for the measurement of dissolved adenosine and guanosine triphosphate in aquatic habitats: applications to marine microbial ecology. J Microbiol Meth 47: 159–167.
-
(2001)
J Microbiol Meth
, vol.47
, pp. 159-167
-
-
Björkman, K.M.1
Karl, D.M.2
-
14
-
-
0030470058
-
Impact of phytoplankton bloom magnitude on a pelagic microbial food web
-
Brussaard, C.P.D., Gast, G.J., van Duyl, F.C., and Riegman, R. (1996) Impact of phytoplankton bloom magnitude on a pelagic microbial food web. Mar Ecol Prog Ser 144: 211–221.
-
(1996)
Mar Ecol Prog Ser
, vol.144
, pp. 211-221
-
-
Brussaard, C.P.D.1
Gast, G.J.2
van Duyl, F.C.3
Riegman, R.4
-
15
-
-
84867345063
-
A cross-platform toolkit for mass spectrometry and proteomics
-
Chambers, M.C., Maclean, B., Burke, R., Amode, D., Ruderman, D.L., Neumann, S., et al. (2012) A cross-platform toolkit for mass spectrometry and proteomics. Nat Biotech 30: 918–920.
-
(2012)
Nat Biotech
, vol.30
, pp. 918-920
-
-
Chambers, M.C.1
Maclean, B.2
Burke, R.3
Amode, D.4
Ruderman, D.L.5
Neumann, S.6
-
16
-
-
7344263011
-
Photosynthetically produced dissolved organic carbon: an important carbon source for planktonic bacteria
-
Cole, J.J., Likens, G.E., and Strayer, D.L. (1982) Photosynthetically produced dissolved organic carbon: an important carbon source for planktonic bacteria. Limnol Oceanogr 27: 1080–1090.
-
(1982)
Limnol Oceanogr
, vol.27
, pp. 1080-1090
-
-
Cole, J.J.1
Likens, G.E.2
Strayer, D.L.3
-
17
-
-
0034068899
-
Natural assemblages of marine proteobacteria and members of the cytophaga-flavobacteria cluster consuming low- and high-molecular-weight dissolved organic matter
-
Cottrell, M.T., and Kirchman, D.L. (2000) Natural assemblages of marine proteobacteria and members of the cytophaga-flavobacteria cluster consuming low- and high-molecular-weight dissolved organic matter. Appl Environ Microbiol 66: 1692–1697.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 1692-1697
-
-
Cottrell, M.T.1
Kirchman, D.L.2
-
18
-
-
46749112662
-
A simple and efficient method for solid-phase extraction of dissolved organic matter (SPE-DOM) from seawater
-
Dittmar, T., Koch, B., Hertkorn, N., and Kattner, G. (2008) A simple and efficient method for solid-phase extraction of dissolved organic matter (SPE-DOM) from seawater. Limnol Oceanogr Methods 6: 230–235.
-
(2008)
Limnol Oceanogr Methods
, vol.6
, pp. 230-235
-
-
Dittmar, T.1
Koch, B.2
Hertkorn, N.3
Kattner, G.4
-
19
-
-
79959342657
-
N-formylkynurenine as a marker of high light stress in photosynthesis
-
Dreaden, T.M., Chen, J., Rexroth, S., and Barry, B.A. (2011) N-formylkynurenine as a marker of high light stress in photosynthesis. J Biol Chem 286: 22632–22641.
-
(2011)
J Biol Chem
, vol.286
, pp. 22632-22641
-
-
Dreaden, T.M.1
Chen, J.2
Rexroth, S.3
Barry, B.A.4
-
20
-
-
84871610304
-
Reactive oxygen and oxidative stress: N-formyl kynurenine in photosystem II and non-photosynthetic proteins
-
Dreaden Kasson, T.M., and Barry, B.A. (2012) Reactive oxygen and oxidative stress: N-formyl kynurenine in photosystem II and non-photosynthetic proteins. Photosyn Res 114: 97–110.
-
(2012)
Photosyn Res
, vol.114
, pp. 97-110
-
-
Dreaden Kasson, T.M.1
Barry, B.A.2
-
21
-
-
84864442260
-
Light-induced oxidative stress, N-formylkynurenine, and oxygenic photosynthesis
-
Dreaden Kasson, T.M., Rexroth, S., and Barry, B.A. (2012) Light-induced oxidative stress, N-formylkynurenine, and oxygenic photosynthesis. PLoS ONE 7: e42220.
-
(2012)
PLoS ONE
, vol.7
-
-
Dreaden Kasson, T.M.1
Rexroth, S.2
Barry, B.A.3
-
22
-
-
84920964214
-
Cryptic carbon and sulfur cycling between surface ocean plankton
-
Durham, B.P., Sharma, S., Luo, H., Smith, C.B., Amin, S.A., Bender, S.J., et al. (2015) Cryptic carbon and sulfur cycling between surface ocean plankton. Proc Natl Acad Sci USA 112: 453–457.
-
(2015)
Proc Natl Acad Sci USA
, vol.112
, pp. 453-457
-
-
Durham, B.P.1
Sharma, S.2
Luo, H.3
Smith, C.B.4
Amin, S.A.5
Bender, S.J.6
-
23
-
-
34147103873
-
Emergent biogeography of microbial communities in a model ocean
-
Follows, M.J., Dutkiewicz, S., Grant, S., and Chisholm, S.W. (2007) Emergent biogeography of microbial communities in a model ocean. Science 315: 1843–1846.
-
(2007)
Science
, vol.315
, pp. 1843-1846
-
-
Follows, M.J.1
Dutkiewicz, S.2
Grant, S.3
Chisholm, S.W.4
-
24
-
-
34250228655
-
Thymidine incorporation as a measure of heterotrophic bacterioplankton production in marine surface waters: evaluation and field results
-
Fuhrman, J.A., and Azam, F. (1982) Thymidine incorporation as a measure of heterotrophic bacterioplankton production in marine surface waters: evaluation and field results. Mar Biol 66: 109–120.
-
(1982)
Mar Biol
, vol.66
, pp. 109-120
-
-
Fuhrman, J.A.1
Azam, F.2
-
25
-
-
0037175218
-
Cellular and extracellular production of carbohydrates and amino acids by the marine diatom Skeletonema costatum: diel variations and effects of N depletion
-
Granum, E., Kirkvold, S., and Myklestad, S.M. (2002) Cellular and extracellular production of carbohydrates and amino acids by the marine diatom Skeletonema costatum: diel variations and effects of N depletion. Mar Ecol Prog Ser 242: 83–94.
-
(2002)
Mar Ecol Prog Ser
, vol.242
, pp. 83-94
-
-
Granum, E.1
Kirkvold, S.2
Myklestad, S.M.3
-
26
-
-
36849010160
-
Interactions of planktonic algae and bacteria: effects on algal growth and organic matter dynamics
-
Grossart, H.P., and Simon, M. (2007) Interactions of planktonic algae and bacteria: effects on algal growth and organic matter dynamics. Aquat Microb Ecol 47: 163–176.
-
(2007)
Aquat Microb Ecol
, vol.47
, pp. 163-176
-
-
Grossart, H.P.1
Simon, M.2
-
27
-
-
2142786755
-
Decrease in molecular weight of photosynthetic products of marine phytoplankton during early diagenesis
-
Hama, T., Yanagi, K., and Hama, J. (2004) Decrease in molecular weight of photosynthetic products of marine phytoplankton during early diagenesis. Limnol Oceanogr 49: 471–481.
-
(2004)
Limnol Oceanogr
, vol.49
, pp. 471-481
-
-
Hama, T.1
Yanagi, K.2
Hama, J.3
-
28
-
-
84876560030
-
MetaboLights – an open-access general-purpose repository for metabolomics studies and associated meta-data
-
Haug, K., Salek, R.M., Conesa, P., Hastings, J., de Matos, P., Rijnbeek, M., et al. (2013) MetaboLights – an open-access general-purpose repository for metabolomics studies and associated meta-data. Nucl Acids Res 41: D781–D786.
-
(2013)
Nucl Acids Res
, vol.41
, pp. D781-D786
-
-
Haug, K.1
Salek, R.M.2
Conesa, P.3
Hastings, J.4
de Matos, P.5
Rijnbeek, M.6
-
29
-
-
0012625503
-
Why dissolved organic matter
-
Hansell, D.A., Carlson, C.A., (eds)., New York, New York, USA, Academic Press
-
Hedges, J.I. (2002) Why dissolved organic matter. In Biochemistry of Marine Dissolved Organic Matter. Hansell, D.A., and Carlson, C.A. (eds). New York, New York, USA: Academic Press, pp. 1–33.
-
(2002)
Biochemistry of Marine Dissolved Organic Matter
, pp. 1-33
-
-
Hedges, J.I.1
-
30
-
-
85086606452
-
Indagine sperimentale sul ruolo degli ormoni vegetali sull'essudazione delle sostanze mucillaginose dalle microalghe marine
-
Homme, E., and Mazur, H. (1992) Indagine sperimentale sul ruolo degli ormoni vegetali sull'essudazione delle sostanze mucillaginose dalle microalghe marine. Ambiente Risore Salute 6: 8–15.
-
(1992)
Ambiente Risore Salute
, vol.6
, pp. 8-15
-
-
Homme, E.1
Mazur, H.2
-
31
-
-
28144441704
-
Structure of synechobactins, new siderophores of the marine cyanobacterium Synechococcus sp. PCC 7002
-
Ito, Y., and Butler, A. (2005) Structure of synechobactins, new siderophores of the marine cyanobacterium Synechococcus sp. PCC 7002. Limnol Oceanogr 50: 1918–1923.
-
(2005)
Limnol Oceanogr
, vol.50
, pp. 1918-1923
-
-
Ito, Y.1
Butler, A.2
-
32
-
-
0031809878
-
Dynamics of dimethyl sulfide in a marine microbial mat
-
Jonkers, H.M., Koopmans, G.F., and van Gemerden, H. (1998) Dynamics of dimethyl sulfide in a marine microbial mat. Microb Ecol 36: 93–100.
-
(1998)
Microb Ecol
, vol.36
, pp. 93-100
-
-
Jonkers, H.M.1
Koopmans, G.F.2
van Gemerden, H.3
-
33
-
-
80051951093
-
Global trends in the fluorescence characteristics and distribution of marine dissolved organic matter
-
Jørgensen, L., Stedmon, C.A., Kragh, T., Markager, S., Middelboe, M., and Søndergaard, M. (2011) Global trends in the fluorescence characteristics and distribution of marine dissolved organic matter. Mar Chem 126: 139–148.
-
(2011)
Mar Chem
, vol.126
, pp. 139-148
-
-
Jørgensen, L.1
Stedmon, C.A.2
Kragh, T.3
Markager, S.4
Middelboe, M.5
Søndergaard, M.6
-
34
-
-
0034212610
-
Determination of amino sugars in environmental samples with high salt content by high performance anion exchange chromatography and pulsed amperometric detection
-
Kaiser, K., and Benner, R. (2000) Determination of amino sugars in environmental samples with high salt content by high performance anion exchange chromatography and pulsed amperometric detection. Anal Chem 72: 2566–2572.
-
(2000)
Anal Chem
, vol.72
, pp. 2566-2572
-
-
Kaiser, K.1
Benner, R.2
-
35
-
-
38749146444
-
Major bacterial contribution to the ocean reservoir of detrital organic carbon and nitrogen
-
Kaiser, K., and Benner, R. (2008) Major bacterial contribution to the ocean reservoir of detrital organic carbon and nitrogen. Limnol Oceanogr 53: 99–112.
-
(2008)
Limnol Oceanogr
, vol.53
, pp. 99-112
-
-
Kaiser, K.1
Benner, R.2
-
36
-
-
60949109643
-
Biochemical composition and size distribution of organic matter at the Pacific and Atlantic time-series stations
-
Kaiser, K., and Benner, R. (2009) Biochemical composition and size distribution of organic matter at the Pacific and Atlantic time-series stations. Mar Chem 113: 63–77.
-
(2009)
Mar Chem
, vol.113
, pp. 63-77
-
-
Kaiser, K.1
Benner, R.2
-
37
-
-
84891760956
-
Data, information, knowledge and principle: back to metabolism in KEGG
-
Kanehisa, M., Goto, S., Sato, Y., Kawashima, M., Furumichi, M., and Tanabe, M. (2014) Data, information, knowledge and principle: back to metabolism in KEGG. Nucl Acids Res 42: D199–D205.
-
(2014)
Nucl Acids Res
, vol.42
, pp. D199-D205
-
-
Kanehisa, M.1
Goto, S.2
Sato, Y.3
Kawashima, M.4
Furumichi, M.5
Tanabe, M.6
-
38
-
-
84986815830
-
The measurement and distribution of dissolved nucleic acids in aquatic environments
-
Karl, D.M., and Bailiff, M.D. (1989) The measurement and distribution of dissolved nucleic acids in aquatic environments. Limnol Oceanogr 34: 543–558.
-
(1989)
Limnol Oceanogr
, vol.34
, pp. 543-558
-
-
Karl, D.M.1
Bailiff, M.D.2
-
39
-
-
84857081283
-
The Pathway Tools prediction algorithm
-
Karp, P.D., Latendresse, M., and Caspi, R. (2011) The Pathway Tools prediction algorithm. Stand Genom Sci 5: 424–429.
-
(2011)
Stand Genom Sci
, vol.5
, pp. 424-429
-
-
Karp, P.D.1
Latendresse, M.2
Caspi, R.3
-
40
-
-
0024123419
-
Dimethyl sulfide production and marine phytoplankton: the importance of species composition and cell size
-
Keller, M.D. (1989) Dimethyl sulfide production and marine phytoplankton: the importance of species composition and cell size. Biol Oceanogr 6: 375–382.
-
(1989)
Biol Oceanogr
, vol.6
, pp. 375-382
-
-
Keller, M.D.1
-
41
-
-
0025058973
-
Sulfur-containing amino acids as precursors of thiols in anoxic coastal sediments
-
Kiene, R.P., Malloy, K.D., and Taylor, B.F. (1990) Sulfur-containing amino acids as precursors of thiols in anoxic coastal sediments. Appl Environ Microbiol 56: 156–161.
-
(1990)
Appl Environ Microbiol
, vol.56
, pp. 156-161
-
-
Kiene, R.P.1
Malloy, K.D.2
Taylor, B.F.3
-
42
-
-
84855402302
-
CAMERA: an integrated strategy for compound spectra extraction and annotation of liquid chromatography/mass spectrometry data sets
-
Kuhl, C., Tautenhahn, R., Böttcher, C., Larson, T.R., and Neumann, S. (2012) CAMERA: an integrated strategy for compound spectra extraction and annotation of liquid chromatography/mass spectrometry data sets. Anal Chem 84: 283–289.
-
(2012)
Anal Chem
, vol.84
, pp. 283-289
-
-
Kuhl, C.1
Tautenhahn, R.2
Böttcher, C.3
Larson, T.R.4
Neumann, S.5
-
43
-
-
79953022302
-
The impact of microbial metabolism on marine dissolved organic matter
-
Kujawinski, E.B. (2011) The impact of microbial metabolism on marine dissolved organic matter. Annu Rev Mar Sci 3: 567–599.
-
(2011)
Annu Rev Mar Sci
, vol.3
, pp. 567-599
-
-
Kujawinski, E.B.1
-
44
-
-
67449159003
-
Identification of possible source markers in marine dissolved organic matter using ultrahigh resolution mass spectrometry
-
Kujawinski, E.B., Longnecker, K., Blough, N.V., Del Vecchio, R., Finlay, L., Kitner, J.B., and Giovannoni, S.J. (2009) Identification of possible source markers in marine dissolved organic matter using ultrahigh resolution mass spectrometry. Geochim Cosmo Acta 73: 4384–4399.
-
(2009)
Geochim Cosmo Acta
, vol.73
, pp. 4384-4399
-
-
Kujawinski, E.B.1
Longnecker, K.2
Blough, N.V.3
Del Vecchio, R.4
Finlay, L.5
Kitner, J.B.6
Giovannoni, S.J.7
-
45
-
-
0142226990
-
Aerobic tryptophan degradation pathway in bacteria: novel kynurenine formamidase
-
Kurnasov, O., Jablonski, L., Polanuyer, B., Dorrestein, P., Begley, T., and Osterman, A. (2003) Aerobic tryptophan degradation pathway in bacteria: novel kynurenine formamidase. FEMS Microbiol Lett 227: 219–227.
-
(2003)
FEMS Microbiol Lett
, vol.227
, pp. 219-227
-
-
Kurnasov, O.1
Jablonski, L.2
Polanuyer, B.3
Dorrestein, P.4
Begley, T.5
Osterman, A.6
-
46
-
-
84879370580
-
Changes in bacterial diversity in response to dissolved organic matter supply in a continuous culture experiment
-
Landa, M., Cottrell, M.T., Kirchman, D.L., Blain, S., and Obernosterer, I. (2013) Changes in bacterial diversity in response to dissolved organic matter supply in a continuous culture experiment. Aquat Microb Ecol 69: 157–168.
-
(2013)
Aquat Microb Ecol
, vol.69
, pp. 157-168
-
-
Landa, M.1
Cottrell, M.T.2
Kirchman, D.L.3
Blain, S.4
Obernosterer, I.5
-
47
-
-
85028131927
-
Phylogenetic and structural response of heterotrophic bacteria to dissolved organic matter of different chemical composition in a continuous culture study
-
Landa, M., Cottrell, M.T., Kirchman, D.L., Kaiser, K., Medeiros, P.M., Tremblay, L., et al. (2014) Phylogenetic and structural response of heterotrophic bacteria to dissolved organic matter of different chemical composition in a continuous culture study. Environ Microbiol 16: 1668–1681.
-
(2014)
Environ Microbiol
, vol.16
, pp. 1668-1681
-
-
Landa, M.1
Cottrell, M.T.2
Kirchman, D.L.3
Kaiser, K.4
Medeiros, P.M.5
Tremblay, L.6
-
48
-
-
0028163796
-
Primary production of prochlorophytes, cyanobacteria, and eucaryotic ultraphytoplankton: measurements from flow cytometric sorting
-
Li, W.K. (1994) Primary production of prochlorophytes, cyanobacteria, and eucaryotic ultraphytoplankton: measurements from flow cytometric sorting. Limnol Oceanogr 39: 169–175.
-
(1994)
Limnol Oceanogr
, vol.39
, pp. 169-175
-
-
Li, W.K.1
-
49
-
-
84912003701
-
Dissolved organic matter produced by Thalassiosira pseudonana
-
Longnecker, K., Kido Soule, M.C., and Kujawinski, E.B. (2015) Dissolved organic matter produced by Thalassiosira pseudonana. Mar Chem 168: 114–123.
-
(2015)
Mar Chem
, vol.168
, pp. 114-123
-
-
Longnecker, K.1
Kido Soule, M.C.2
Kujawinski, E.B.3
-
50
-
-
84937081029
-
Stability of microbial auxins produced from soil application of L-tryptophan
-
Martens, D.A., and Frankenberger, W.T. (1993a) Stability of microbial auxins produced from soil application of L-tryptophan. Soil Sci 155: 263–271.
-
(1993)
Soil Sci
, vol.155
, pp. 263-271
-
-
Martens, D.A.1
Frankenberger, W.T.2
-
52
-
-
0002090709
-
Microbial production of auxin indole 3-acetic acid in marine sediments
-
Maruyama, A., Maeda, M., and Simidu, U. (1989) Microbial production of auxin indole 3-acetic acid in marine sediments. Mar Ecol Prog Ser 58: 69–75.
-
(1989)
Mar Ecol Prog Ser
, vol.58
, pp. 69-75
-
-
Maruyama, A.1
Maeda, M.2
Simidu, U.3
-
53
-
-
0027803707
-
Presence of auxin indole-3-acetic acid in the northern Adriatic Sea: phytohormones and mucilage
-
Mazur, H., and Homme, E. (1993) Presence of auxin indole-3-acetic acid in the northern Adriatic Sea: phytohormones and mucilage. Mar Ecol Prog Ser 99: 163–168.
-
(1993)
Mar Ecol Prog Ser
, vol.99
, pp. 163-168
-
-
Mazur, H.1
Homme, E.2
-
54
-
-
34548512226
-
Light-stimulated bacteria production and amino acid assimilation by cyanobacteria and other microbes in the North Atlantic Ocean
-
Michelou, V.K., Cottrell, M.T., and Kirchman, D.L. (2007) Light-stimulated bacteria production and amino acid assimilation by cyanobacteria and other microbes in the North Atlantic Ocean. Appl Environ Microbiol 73: 5539–5546.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5539-5546
-
-
Michelou, V.K.1
Cottrell, M.T.2
Kirchman, D.L.3
-
55
-
-
79953219816
-
Decomposition of dissolved organic matter released by an isolate of Microcystis aeruginosa and morphological profile of the associated bacterial community
-
Moreira, I.C., Bianchini, I., Jr, and Vieira, A. (2011) Decomposition of dissolved organic matter released by an isolate of Microcystis aeruginosa and morphological profile of the associated bacterial community. Braz J Biol 71: 57–63.
-
(2011)
Braz J Biol
, vol.71
, pp. 57-63
-
-
Moreira, I.C.1
Bianchini, I.2
Vieira, A.3
-
56
-
-
79951805840
-
Rapid differentiation of phenotypically and genotypically similar Synechococcus elongatus strains by PCR fingerprinting
-
Muralitharan, G., and Thajuddin, N. (2011) Rapid differentiation of phenotypically and genotypically similar Synechococcus elongatus strains by PCR fingerprinting. Biologia (Bratisl) 66: 238–243.
-
(2011)
Biologia (Bratisl)
, vol.66
, pp. 238-243
-
-
Muralitharan, G.1
Thajuddin, N.2
-
57
-
-
0028976515
-
Release of extracellular products by phytoplankton with special emphasis on polysaccharides
-
Myklestad, S.M. (1995) Release of extracellular products by phytoplankton with special emphasis on polysaccharides. Sci Tot Environ 165: 155–164.
-
(1995)
Sci Tot Environ
, vol.165
, pp. 155-164
-
-
Myklestad, S.M.1
-
58
-
-
84891301536
-
Organic matter-bacteria interactions in seawater
-
Kirchman, D.L., (ed.)., Hoboken, New Jersey, USA, John Wiley & Sons
-
Nagata, T. (2008) Organic matter-bacteria interactions in seawater. In Microbial Ecology of the Oceans. Kirchman, D.L. (ed.). Hoboken, New Jersey, USA: John Wiley & Sons, pp. 207–241.
-
(2008)
Microbial Ecology of the Oceans
, pp. 207-241
-
-
Nagata, T.1
-
59
-
-
0027091372
-
Release of macromolecular organic complexes by heterotrophic marine flagellates
-
Nagata, T., and Kirchman, D.L. (1992) Release of macromolecular organic complexes by heterotrophic marine flagellates. Mar Ecol Prog Ser 83: 233–240.
-
(1992)
Mar Ecol Prog Ser
, vol.83
, pp. 233-240
-
-
Nagata, T.1
Kirchman, D.L.2
-
60
-
-
0037350018
-
Microbial degradation of peptidoglycan in seawater
-
Nagata, T., Meon, B., and Kirchman, D.L. (2003) Microbial degradation of peptidoglycan in seawater. Limnol Oceanogr 48: 745–754.
-
(2003)
Limnol Oceanogr
, vol.48
, pp. 745-754
-
-
Nagata, T.1
Meon, B.2
Kirchman, D.L.3
-
61
-
-
84861929666
-
Tracking differential incorporation of dissolved organic carbon types among diverse lineages of Sargasso Sea bacterioplankton
-
Nelson, C.E., and Carlson, C.A. (2012) Tracking differential incorporation of dissolved organic carbon types among diverse lineages of Sargasso Sea bacterioplankton. Environ Microbiol 14: 1500–1516.
-
(2012)
Environ Microbiol
, vol.14
, pp. 1500-1516
-
-
Nelson, C.E.1
Carlson, C.A.2
-
62
-
-
0021473380
-
Membrane protein damage and repair: removal and replacement of inactivated 32-kilodalton polypeptides in chloroplast membranes
-
Ohad, I., Kyle, D.J., and Arntzen, C.J. (1984) Membrane protein damage and repair: removal and replacement of inactivated 32-kilodalton polypeptides in chloroplast membranes. J Cell Biol 99: 481–485.
-
(1984)
J Cell Biol
, vol.99
, pp. 481-485
-
-
Ohad, I.1
Kyle, D.J.2
Arntzen, C.J.3
-
63
-
-
0029028356
-
Polyamines alter sequence-specific DNA-protein interactions
-
Panagiotidis, C.A., Artandi, S., Calame, K., and Silverstein, S.J. (1995) Polyamines alter sequence-specific DNA-protein interactions. Nucleic Acids Res 23: 1800–1809.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 1800-1809
-
-
Panagiotidis, C.A.1
Artandi, S.2
Calame, K.3
Silverstein, S.J.4
-
64
-
-
84858790233
-
Metabolomics: the apogee of the omics trilogy
-
Patti, G.J., Yanes, O., and Siuzdak, G. (2012) Metabolomics: the apogee of the omics trilogy. Nature Rev Mol Cell Biol 13: 263–269.
-
(2012)
Nature Rev Mol Cell Biol
, vol.13
, pp. 263-269
-
-
Patti, G.J.1
Yanes, O.2
Siuzdak, G.3
-
65
-
-
84903730114
-
Molecular mapping of sorbent selectivities with respect to isolation of Arctic dissolved organic matter as measured by Fourier transform mass spectrometry
-
Perminova, I.V., Dubinenkov, I.V., Kononikhin, A.S., Konstantinov, A.I., Zherebker, A.Y., Andzhushev, M.A., et al. (2014) Molecular mapping of sorbent selectivities with respect to isolation of Arctic dissolved organic matter as measured by Fourier transform mass spectrometry. Environ Sci Technol Lett 48: 7461–7468.
-
(2014)
Environ Sci Technol Lett
, vol.48
, pp. 7461-7468
-
-
Perminova, I.V.1
Dubinenkov, I.V.2
Kononikhin, A.S.3
Konstantinov, A.I.4
Zherebker, A.Y.5
Andzhushev, M.A.6
-
66
-
-
34548023950
-
Acidic acetonitrile for cellular metabolome extraction from escherichia coli
-
Rabinowitz, J.D., and Kimball, E. (2007) Acidic acetonitrile for cellular metabolome extraction from escherichia coli. Anal Chem 79: 6167–6173.
-
(2007)
Anal Chem
, vol.79
, pp. 6167-6173
-
-
Rabinowitz, J.D.1
Kimball, E.2
-
67
-
-
0029812956
-
Concentrations and uptake of neutral monosaccharides along 140°W in the equatorial Pacific: contribution of glucose to heterotrophic bacterial activity and the DOM flux
-
Rich, J.H., Ducklow, H.W., and Kirchman, D.L. (1996) Concentrations and uptake of neutral monosaccharides along 140°W in the equatorial Pacific: contribution of glucose to heterotrophic bacterial activity and the DOM flux. Limnol Oceanogr 41: 595–604.
-
(1996)
Limnol Oceanogr
, vol.41
, pp. 595-604
-
-
Rich, J.H.1
Ducklow, H.W.2
Kirchman, D.L.3
-
68
-
-
0028977830
-
On the trophic fate of Phaeocystis pouchetii (Hariot): VI. Significance of Phaeocystis-derived mucus for vertical flux
-
Riebesell, U., Reigstad, M., Wassmann, P., Noji, T., and Passow, U. (1995) On the trophic fate of Phaeocystis pouchetii (Hariot): VI. Significance of Phaeocystis-derived mucus for vertical flux. Neth J Sea Res 33: 193–203.
-
(1995)
Neth J Sea Res
, vol.33
, pp. 193-203
-
-
Riebesell, U.1
Reigstad, M.2
Wassmann, P.3
Noji, T.4
Passow, U.5
-
69
-
-
83155191056
-
Net production and consumption of fluorescent colored dissolved organic matter by natural bacterial assemblages growing on marine phytoplankton exudates
-
Romera-Castillo, C., Sarmento, H., Álvarez-Salgado, X.A., Gasol, J.M., and Marrase, C. (2011) Net production and consumption of fluorescent colored dissolved organic matter by natural bacterial assemblages growing on marine phytoplankton exudates. Appl Environ Microbiol 77: 7490–7498.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 7490-7498
-
-
Romera-Castillo, C.1
Sarmento, H.2
Álvarez-Salgado, X.A.3
Gasol, J.M.4
Marrase, C.5
-
70
-
-
40249103778
-
Metabolic evidence for biogeographic isolation of the extremophilic bacterium Salinibacter ruber
-
Rosselló-Mora, R., Lucio, M., Peña, A., Brito-Echeverría, J., López-López, A., Valens-Vadell, M., et al. (2008) Metabolic evidence for biogeographic isolation of the extremophilic bacterium Salinibacter ruber. ISME J 2: 242–253.
-
(2008)
ISME J
, vol.2
, pp. 242-253
-
-
Rosselló-Mora, R.1
Lucio, M.2
Peña, A.3
Brito-Echeverría, J.4
López-López, A.5
Valens-Vadell, M.6
-
71
-
-
33947238287
-
The sorcerer II global ocean sampling expedition: northwest atlantic through eastern tropical pacific
-
Rusch, D.B., Halpern, A.L., Sutton, G., Heidelberg, K.B., Williamson, S., Yooseph, S., et al. (2007) The sorcerer II global ocean sampling expedition: northwest atlantic through eastern tropical pacific. PLoS Biol 5: e77.
-
(2007)
PLoS Biol
, vol.5
-
-
Rusch, D.B.1
Halpern, A.L.2
Sutton, G.3
Heidelberg, K.B.4
Williamson, S.5
Yooseph, S.6
-
72
-
-
0036098886
-
Molecular ecology of the marine cyanobacterial genera Prochlorococcus and Synechococcus
-
Scanlan, D.J., and West, N.J. (2002) Molecular ecology of the marine cyanobacterial genera Prochlorococcus and Synechococcus. FEMS Microbiol Ecol 40: 1–12.
-
(2002)
FEMS Microbiol Ecol
, vol.40
, pp. 1-12
-
-
Scanlan, D.J.1
West, N.J.2
-
73
-
-
0036942569
-
Evidence for production of the phytohormone indole-3-acetic acid by cyanobacteria
-
Sergeeva, E., Liaimer, A., and Bergman, B. (2002) Evidence for production of the phytohormone indole-3-acetic acid by cyanobacteria. Planta 215: 229–238.
-
(2002)
Planta
, vol.215
, pp. 229-238
-
-
Sergeeva, E.1
Liaimer, A.2
Bergman, B.3
-
74
-
-
77954246266
-
Chemotactic response of marine bacteria to the extracellular products of Synechococcus and Prochlorococcus
-
Seymour, J.R., Ahmed, T., Durham, W.M., and Stocker, R. (2010) Chemotactic response of marine bacteria to the extracellular products of Synechococcus and Prochlorococcus. Aquat Microb Ecol 59: 161–168.
-
(2010)
Aquat Microb Ecol
, vol.59
, pp. 161-168
-
-
Seymour, J.R.1
Ahmed, T.2
Durham, W.M.3
Stocker, R.4
-
75
-
-
0031468625
-
Primary structure characterization of the photosystem II D1 and D2 subunits
-
Sharma, J., Panico, M., Shipton, C.A., Nilsson, F., Morris, H.R., and Barber, J. (1997) Primary structure characterization of the photosystem II D1 and D2 subunits. J Biol Chem 272: 33158–33166.
-
(1997)
J Biol Chem
, vol.272
, pp. 33158-33166
-
-
Sharma, J.1
Panico, M.2
Shipton, C.A.3
Nilsson, F.4
Morris, H.R.5
Barber, J.6
-
76
-
-
32444432587
-
METLIN a metabolite mass spectral database
-
Smith, C.A., O'Maille, G., Want, E.J., Qin, C., Trauger, S.A., Brandon, T.R., et al. (2005) METLIN a metabolite mass spectral database. Ther Drug Monit 27: 747–751.
-
(2005)
Ther Drug Monit
, vol.27
, pp. 747-751
-
-
Smith, C.A.1
O'Maille, G.2
Want, E.J.3
Qin, C.4
Trauger, S.A.5
Brandon, T.R.6
-
77
-
-
32444446805
-
XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification
-
Smith, C.A., Want, E.J., O'Maille, G., Abagyan, R., and Siuzdak, G. (2006) XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification. Anal Chem 78: 779–787.
-
(2006)
Anal Chem
, vol.78
, pp. 779-787
-
-
Smith, C.A.1
Want, E.J.2
O'Maille, G.3
Abagyan, R.4
Siuzdak, G.5
-
78
-
-
0037130223
-
An antioxidant function for DMSP and DMS in marine algae
-
Sunda, W., Kleber, D.J., Kiene, R.P., and Huntsman, S. (2002) An antioxidant function for DMSP and DMS in marine algae. Lett Nat 418: 317–320.
-
(2002)
Lett Nat
, vol.418
, pp. 317-320
-
-
Sunda, W.1
Kleber, D.J.2
Kiene, R.P.3
Huntsman, S.4
-
80
-
-
14844313671
-
Matrix effects: the Achilles heel of quantitative high-performance liquid chromatography-electrospray-tandem mass spectrometry
-
Taylor, P.J. (2005) Matrix effects: the Achilles heel of quantitative high-performance liquid chromatography-electrospray-tandem mass spectrometry. Clin Biochem 38: 328–334.
-
(2005)
Clin Biochem
, vol.38
, pp. 328-334
-
-
Taylor, P.J.1
-
81
-
-
78650869963
-
Composition and function of mucilage macroaggregates in the northern Adriatic
-
Turk, V., Hagstrom, A., Kovač, N., and Faganeli, J. (2010) Composition and function of mucilage macroaggregates in the northern Adriatic. Aquat Microb Ecol 61: 279–289.
-
(2010)
Aquat Microb Ecol
, vol.61
, pp. 279-289
-
-
Turk, V.1
Hagstrom, A.2
Kovač, N.3
Faganeli, J.4
-
82
-
-
84885922460
-
A guideline to univariate statistical analysis for LC/MS-based untargeted metabolomics-derived data
-
Vinaixa, M., Samino, S., Saez, I., Duran, J., Guinovart, J.J., and Yanes, O. (2012) A guideline to univariate statistical analysis for LC/MS-based untargeted metabolomics-derived data. Metabolites 2: 775–795.
-
(2012)
Metabolites
, vol.2
, pp. 775-795
-
-
Vinaixa, M.1
Samino, S.2
Saez, I.3
Duran, J.4
Guinovart, J.J.5
Yanes, O.6
-
83
-
-
0028290591
-
Demethylation and cleavage of dimethylsulfoniopropionate in marine intertidal sediments
-
Visscher, P.T., Kiene, R.P., and Taylor, B.F. (1994) Demethylation and cleavage of dimethylsulfoniopropionate in marine intertidal sediments. FEMS Microbiol Ecol 14: 179–189.
-
(1994)
FEMS Microbiol Ecol
, vol.14
, pp. 179-189
-
-
Visscher, P.T.1
Kiene, R.P.2
Taylor, B.F.3
-
84
-
-
0004217638
-
-
2nd edn, New York, New York, USA, Springer-Verlag
-
Wetzel, R.G., and Likens, G.E. (1991) Limnological Analyses, 2nd edn. New York, New York, USA: Springer-Verlag.
-
(1991)
Limnological Analyses
-
-
Wetzel, R.G.1
Likens, G.E.2
-
85
-
-
77952302069
-
In silico fragmentation for computer assisted identification of metabolite mass spectra
-
Wolf, S., Schmidt, S., Müller-Hannemann, M., and Neumann, S. (2010) In silico fragmentation for computer assisted identification of metabolite mass spectra. BMC Bioinform 11: 148–159.
-
(2010)
BMC Bioinform
, vol.11
, pp. 148-159
-
-
Wolf, S.1
Schmidt, S.2
Müller-Hannemann, M.3
Neumann, S.4
-
86
-
-
0042178311
-
Distribution and alteration of amino acids in bulk DOM along a transect from bay to oceanic waters
-
Yamashita, Y., and Tanoue, E. (2003) Distribution and alteration of amino acids in bulk DOM along a transect from bay to oceanic waters. Mar Chem 82: 145–160.
-
(2003)
Mar Chem
, vol.82
, pp. 145-160
-
-
Yamashita, Y.1
Tanoue, E.2
-
87
-
-
0036952070
-
Dimethylsulfoniopropionate: its sources, role in the marine food web, and biological degradation to dimethylsulfide
-
Yoch, D.C. (2002) Dimethylsulfoniopropionate: its sources, role in the marine food web, and biological degradation to dimethylsulfide. Appl Environ Microbiol 68: 5804–5815.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 5804-5815
-
-
Yoch, D.C.1
-
88
-
-
84898641269
-
Molecular and structural characterization of dissolved organic matter during and post cyanobacterial bloom in Taihu by combination of NMR spectroscopy and FTICR mass spectrometry
-
Zhang, F., Harir, M., Moritz, F., Zhang, J., Witting, M., Wu, Y., et al. (2014) Molecular and structural characterization of dissolved organic matter during and post cyanobacterial bloom in Taihu by combination of NMR spectroscopy and FTICR mass spectrometry. Water Res 57: 280–294.
-
(2014)
Water Res
, vol.57
, pp. 280-294
-
-
Zhang, F.1
Harir, M.2
Moritz, F.3
Zhang, J.4
Witting, M.5
Wu, Y.6
-
89
-
-
0037313141
-
High rate of uptake of organic nitrogen compounds by Prochlorococcus cyanobacteria as a key to their dominance in oligotrophic oceanic waters
-
Zubkov, M.V., Fuchs, B.M., Tarran, G.A., Burkhill, P.H., and Amann, R. (2003) High rate of uptake of organic nitrogen compounds by Prochlorococcus cyanobacteria as a key to their dominance in oligotrophic oceanic waters. Appl Environ Microbiol 69: 1299–1304.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 1299-1304
-
-
Zubkov, M.V.1
Fuchs, B.M.2
Tarran, G.A.3
Burkhill, P.H.4
Amann, R.5
-
90
-
-
0027330960
-
Consumption of dissolved organic carbon by marine bacteria and demand for inorganic nutrients
-
Zweifel, U.L., Norrman, B., and Hagström, Å. (1993) Consumption of dissolved organic carbon by marine bacteria and demand for inorganic nutrients. Mar Ecol Prog Ser 101: 23–32.
-
(1993)
Mar Ecol Prog Ser
, vol.101
, pp. 23-32
-
-
Zweifel, U.L.1
Norrman, B.2
Hagström, Å.3
|