A cross-platform toolkit for mass spectrometry and proteomics

Nature Biotechnology

Volumn 30, Issue 10, 2012, Pages 918-920

  Chambers, Matthew C ^a   MacLean, Brendan ^b   Burke, Robert ^c   Amodei, Dario ^d   Ruderman, Daniel L ^c   Neumann, Steffen ^e   Gatto, Laurent ^f   Fischer, Bernd ^g   Pratt, Brian ^h   Egertson, Jarrett ^b   Hoff, Katherine ^c   Kessner, Darren ^c   Tasman, Natalie ^h   Shulman, Nicholas ^b   Frewen, Barbara ^b   Baker, Tahmina A ^b   Brusniak, Mi Youn ⁱ   Paulse, Christopher ⁱ   Creasy, David ^j   Flashner, Lisa ^c   Kani, Kian ^c   Moulding, Chris ^c   Seymour, Sean L ^k   Nuwaysir, Lydia M ^k   Lefebvre, Brent ^k   Kuhlmann, Frank ^l   Roark, Joe ^l   Rainer, Paape ^m   Detlev, Suckau ^m   Hemenway, Tina ⁿ   Huhmer, Andreas ⁿ   Langridge, James ^o   Connolly, Brian ^p   Chadick, Trey ^p   Holly, Krisztina ^c   Eckels, Josh ^p   Deutsch, Eric W ⁱ   Moritz, Robert L ⁱ   Katz, Jonathan E ^c   Agus, David B ^c   MacCoss, Michael ^b   Tabb, David L ^a   Mallick, Parag ^c,d   more..

^a VANDERBILT UNIVERSITY MEDICAL CENTER   (United States)

^b UNIVERSITY OF WASHINGTON   (United States)

^c UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

^d STANFORD UNIVERSITY   (United States)

^e LEIBNIZ INSTITUTE OF PLANT BIOCHEMISTRY   (Germany)

^f UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^g EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

^h Insilicos   (United States)

ⁱ INSTITUTE FOR SYSTEMS BIOLOGY   (United States)

^j Matrix Science   (United States)

^k MDS SCIEX   (Canada)

^l AGILENT TECHNOLOGIES   (United States)

^m BRUKER DALTONIK GMBH   (Germany)

ⁿ Thermo Fisher Scientific   (United States)

^o WATERS CORPORATION   (United States)

^p LabKey Software   (United States)

more..

Author keywords

[No Author keywords available]

Indexed keywords

PROTEOME;

BIOINFORMATICS; COMPUTER INTERFACE; COMPUTER PROGRAM; DATA ANALYSIS; HUMAN; LETTER; MASS SPECTROMETRY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEOMICS;

HUMANS; MASS SPECTROMETRY; PROTEOME; PROTEOMICS; SOFTWARE;

EID: 84867345063     PISSN: 10870156     EISSN: 15461696     Source Type: Journal    
DOI: 10.1038/nbt.2377     Document Type: Letter

References (15)

1. Schwanhausser, B. et al. Nature 473, 337-342 (2011).
2. Raj, L. et al. Nature 475, 231-234 (2011).
3. Bouwmeester, T. et al. Nat Cell Biol. 6, 97-105 (2004).
4. Patterson, S.D. Nat Biotechnol. 21, 221-222 (2003).
5. Askenazi, M., parikh, J.r. & Marto, J.A. Nat Methods 6, 240-241 (2009).
6. Pedrioli, P.G. et al. Nat Biotechnol. 22, 1459-1466 (2004).
7. Orchard, S. et al. Proteomics 10, 1895-1898 (2010).
8. Kessner, D., chambers, M., Burke, R., Agus, D. & Mallick, P. Bioinformatics 24, 2534-2536 (2008).
9. Sturm, M. et al. BMC Bioinformatics 9, 163 (2008).
10. Apache.software.Foundation 2004. http://www.apache. org/licenses/LIcense- 2.0.html.
11. Martens, L. et al. Mol. Cell. Proteomics 10, r110 000133 (2011).
12. Eisenacher, M. Methods Mol. Biol. 696, 161-177 (2011).
13. Benton, H.P., Wong, D.M., Trauger, S.A. & Siuzdak, G. Anal. Chem. 80, 6382-6389 (2008).
14. Luethy, R. et al. J. Proteome Res. 7, 4031-4039 (2008).
15. MacLean, B. et al. Bioinformatics 26, 966-968 (2010).