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Volumn 8, Issue 1, 2017, Pages 1-15

A plant pathology perspective of fungal genome sequencing

Author keywords

Genome size; Pathogen evolution; Pathogen lifestyle; Plant pathology

Indexed keywords


EID: 85023597779     PISSN: 22106340     EISSN: 22106359     Source Type: Journal    
DOI: 10.5598/imafungus.2017.08.01.01     Document Type: Article
Times cited : (68)

References (89)
  • 1
    • 84900843591 scopus 로고    scopus 로고
    • De novo genome assembly of the soil-borne fungus and tomato pathogen Pyrenochaeta lycopersici
    • Aragona M, Minio A, Ferrarini A, Valente MT, Bagnaresi P, et al. (2014) De novo genome assembly of the soil-borne fungus and tomato pathogen Pyrenochaeta lycopersici. BMC Genomics 15: 1-12
    • (2014) BMC Genomics , vol.15 , pp. 1-12
    • Aragona, M.1    Minio, A.2    Ferrarini, A.3    Valente, M.T.4    Bagnaresi, P.5
  • 3
    • 38349073608 scopus 로고    scopus 로고
    • A rapid method for detecting and quantifying bacterial DNA in rust fungal DNA samples
    • Barnes C, Szabo L (2008) A rapid method for detecting and quantifying bacterial DNA in rust fungal DNA samples. Phytopathology 98: 115-119
    • (2008) Phytopathology , vol.98 , pp. 115-119
    • Barnes, C.1    Szabo, L.2
  • 4
    • 0035666121 scopus 로고    scopus 로고
    • Microsatellite markers reflect intra-specific relationships between isolates of the vascular wilt pathogen Ceratocystis fimbriata
    • Barnes I, Gaur A, Burgess T, Roux J, Wingfield BD, Wingfield MJ (2001) Microsatellite markers reflect intra-specific relationships between isolates of the vascular wilt pathogen Ceratocystis fimbriata. Molecular Plant Pathology 2: 319-325
    • (2001) Molecular Plant Pathology , vol.2 , pp. 319-325
    • Barnes, I.1    Gaur, A.2    Burgess, T.3    Roux, J.4    Wingfield, B.D.5    Wingfield, M.J.6
  • 5
    • 0035161543 scopus 로고    scopus 로고
    • Genomes OnLine Database (GOLD): a monitor of genome projects world-wide
    • Bernal A, Ear U, Kyrpides N (2001) Genomes OnLine Database (GOLD): a monitor of genome projects world-wide. Nucleic Acids Research 29: 126-127
    • (2001) Nucleic Acids Research , vol.29 , pp. 126-127
    • Bernal, A.1    Ear, U.2    Kyrpides, N.3
  • 6
    • 84890791898 scopus 로고    scopus 로고
    • MAT gene idiomorphs suggest a heterothallic sexual cycle in a predominantly asexual and important pine pathogen
    • Bihon W, Wingfield MJ, Slippers B, Duong TA, Wingfield BD (2014) MAT gene idiomorphs suggest a heterothallic sexual cycle in a predominantly asexual and important pine pathogen. Fungal Genetics and Biology 62: 55-61
    • (2014) Fungal Genetics and Biology , vol.62 , pp. 55-61
    • Bihon, W.1    Wingfield, M.J.2    Slippers, B.3    Duong, T.A.4    Wingfield, B.D.5
  • 10
    • 84977477629 scopus 로고    scopus 로고
    • Transposable elements versus the fungal genome: impact on whole-genome architecture and transcriptional profiles
    • Castanera R, López-Varas L, Borgognone A, LaButti K, Lapidus A, et al. (2016) Transposable elements versus the fungal genome: impact on whole-genome architecture and transcriptional profiles. PLOS Genetics 12: e1006108
    • (2016) PLOS Genetics , vol.12
    • Castanera, R.1    López-Varas, L.2    Borgognone, A.3    LaButti, K.4    Lapidus, A.5
  • 11
    • 38849141983 scopus 로고    scopus 로고
    • Comparative genome analysis across a kingdom of eukaryotic organisms: specialization and diversification in the Fungi
    • Cornell MJ, Alam I, Soanes DM, Wong HM, Hedeler C, et al. (2007) Comparative genome analysis across a kingdom of eukaryotic organisms: specialization and diversification in the Fungi. Genome Research 17: 1809-1822
    • (2007) Genome Research , vol.17 , pp. 1809-1822
    • Cornell, M.J.1    Alam, I.2    Soanes, D.M.3    Wong, H.M.4    Hedeler, C.5
  • 12
    • 77956016484 scopus 로고    scopus 로고
    • The Fungal Genome Initiative and lessons learned from genome sequencing
    • Cuomo CA, Birren BW (2010) The Fungal Genome Initiative and lessons learned from genome sequencing. In: Methods in Enzymology: 833-855
    • (2010) In: Methods in Enzymology , pp. 833-855
    • Cuomo, C.A.1    Birren, B.W.2
  • 13
    • 84870667343 scopus 로고    scopus 로고
    • The genomes of the fungal plant pathogens Cladosporium fulvum and Dothistroma septosporum reveal adaptation to different hosts and lifestyles but also signatures of common ancestry
    • De Wit PJ, Van Der Burgt A, ökmen B, Stergiopoulos I, Abd-Elsalam KA, et al. (2012) The genomes of the fungal plant pathogens Cladosporium fulvum and Dothistroma septosporum reveal adaptation to different hosts and lifestyles but also signatures of common ancestry. PLOS Genetics 8: e1003088
    • (2012) PLOS Genetics , vol.8
    • De Wit, P.J.1    Van Der Burgt, A.2    Ökmen, B.3    Stergiopoulos, I.4    Abd-Elsalam, K.A.5
  • 14
    • 79952296285 scopus 로고    scopus 로고
    • Genome and transcriptome analyses of the mountain pine beetle-fungal symbiont Grosmannia clavigera, a lodgepole pine pathogen
    • DiGuistini S, Wang Y, Liao NY, Taylor G, Tanguay P, et al. (2011) Genome and transcriptome analyses of the mountain pine beetle-fungal symbiont Grosmannia clavigera, a lodgepole pine pathogen. Proceedings of the National Academy of Sciences, USA 108: 2504-2509
    • (2011) Proceedings of the National Academy of Sciences, USA , vol.108 , pp. 2504-2509
    • DiGuistini, S.1    Wang, Y.2    Liao, N.Y.3    Taylor, G.4    Tanguay, P.5
  • 15
    • 84897715814 scopus 로고    scopus 로고
    • Nomenclatural novelties
    • Doweld AB (2013) Nomenclatural novelties. Index Fungorum 42: 1-2
    • (2013) Index Fungorum , vol.42 , pp. 1-2
    • Doweld, A.B.1
  • 17
    • 78149233217 scopus 로고    scopus 로고
    • A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres
    • Ellwood SR, Liu Z, Syme RA, Lai Z, Hane JK, et al. (2010) A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres. Genome Biology 11: 1-14
    • (2010) Genome Biology , vol.11 , pp. 1-14
    • Ellwood, S.R.1    Liu, Z.2    Syme, R.A.3    Lai, Z.4    Hane, J.K.5
  • 19
    • 33746576136 scopus 로고    scopus 로고
    • Emergence of a new disease as a result of interspecific virulence gene transfer
    • Friesen TL, Stukenbrock EH, Liu Z, Meinhardt S, Ling H, et al.(2006) Emergence of a new disease as a result of interspecific virulence gene transfer. Nature Genetics 38: 953-956
    • (2006) Nature Genetics , vol.38 , pp. 953-956
    • Friesen, T.L.1    Stukenbrock, E.H.2    Liu, Z.3    Meinhardt, S.4    Ling, H.5
  • 20
    • 85023632762 scopus 로고    scopus 로고
    • Fungal Genome Initiative (white paper)
    • Fungal Research Community (2002) Fungal Genome Initiative (white paper)
    • (2002) Fungal Research Community
  • 21
    • 84927144729 scopus 로고    scopus 로고
    • The next epidemic-Lessons from Ebola
    • Gates B (2015) The next epidemic-Lessons from Ebola. New England Journal of Medicine 372: 1381-1384
    • (2015) New England Journal of Medicine , vol.372 , pp. 1381-1384
    • Gates, B.1
  • 22
    • 84891336769 scopus 로고    scopus 로고
    • Climate change and its impact on plant diseases
    • Gautam H, Bhardwaj M, Kumar R (2013) Climate change and its impact on plant diseases. Current Science 105: 1685-1691
    • (2013) Current Science , vol.105 , pp. 1685-1691
    • Gautam, H.1    Bhardwaj, M.2    Kumar, R.3
  • 23
    • 71049176982 scopus 로고    scopus 로고
    • Genome 10K: a proposal to obtain whole-genome sequence for 10 000 vertebrate s species
    • Genome 10K Community of Scientists (2009) Genome 10K: a proposal to obtain whole-genome sequence for 10 000 vertebrate s species. Journal of Heredity 100: 659-674
    • (2009) Journal of Heredity , vol.100 , pp. 659-674
  • 28
    • 84919950034 scopus 로고    scopus 로고
    • Microsatellite and mating type primers for the maize and sorghum pathogen, Exserohilum turcicum
    • Haasbroek MP, Craven M, Barnes I, Crampton BG (2014) Microsatellite and mating type primers for the maize and sorghum pathogen, Exserohilum turcicum. Australasian Plant Pathology 43: 577-581
    • (2014) Australasian Plant Pathology , vol.43 , pp. 577-581
    • Haasbroek, M.P.1    Craven, M.2    Barnes, I.3    Crampton, B.G.4
  • 29
    • 84864815656 scopus 로고    scopus 로고
    • Global species numbers of fungi: are tropical studies and molecular approaches contributing to a more robust estimate?
    • Hawksworth DL (2012) Global species numbers of fungi: are tropical studies and molecular approaches contributing to a more robust estimate? Biodiversity and Conservation 21: 2425-2433
    • (2012) Biodiversity and Conservation , vol.21 , pp. 2425-2433
    • Hawksworth, D.L.1
  • 31
    • 84866276946 scopus 로고    scopus 로고
    • Tools to kill: genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina
    • Islam MS, Haque MS, Islam MM, Emdad EM, Halim A, et al. (2012) Tools to kill: genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina. BMC Genomics 13: 1-16
    • (2012) BMC Genomics , vol.13 , pp. 1-16
    • Islam, M.S.1    Haque, M.S.2    Islam, M.M.3    Emdad, E.M.4    Halim, A.5
  • 32
    • 0000860860 scopus 로고
    • Host-pathogen interactions IV. Studies on the polysaccharide-degrading enzymes secreted by Fusarium oxysporum f
    • Jones TM, Anderson AJ, Albersheim P (1972) Host-pathogen interactions IV. Studies on the polysaccharide-degrading enzymes secreted by Fusarium oxysporum f. sp. lycopersici. Physiological Plant Pathology 2: 153-166
    • (1972) sp. lycopersici. Physiological Plant Pathology , vol.2 , pp. 153-166
    • Jones, T.M.1    Anderson, A.J.2    Albersheim, P.3
  • 33
    • 33750597877 scopus 로고    scopus 로고
    • Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis
    • Kamper J, Kahmann R, Bolker M, Ma L-J, Brefort T, et al. (2006) Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis. Nature 444: 97-101
    • (2006) Nature , vol.444 , pp. 97-101
    • Kamper, J.1    Kahmann, R.2    Bolker, M.3    Ma, L.-J.4    Brefort, T.5
  • 36
    • 0036021699 scopus 로고    scopus 로고
    • Transposable elements and the evolution of genome size in eukaryotes
    • Kidwell MG (2002) Transposable elements and the evolution of genome size in eukaryotes. Genetica 115: 49-63
    • (2002) Genetica , vol.115 , pp. 49-63
    • Kidwell, M.G.1
  • 38
    • 79960934898 scopus 로고    scopus 로고
    • Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens
    • Klosterman SJ, Subbarao KV, Kang S, Veronese P, Gold SE, et al. (2011) Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens. PLOS Pathogens 7: e1002137
    • (2011) PLOS Pathogens , vol.7
    • Klosterman, S.J.1    Subbarao, K.V.2    Kang, S.3    Veronese, P.4    Gold, S.E.5
  • 42
    • 15244357386 scopus 로고    scopus 로고
    • Functional analysis of all nonribosomal peptide synthetases in Cochliobolus heterostrophus reveals a factor, NPS6, involved in virulence and resistance to oxidative stress
    • Lee B-N, Kroken S, Chou DYT, Robbertse B, Yoder OC, Turgeon BG (2005) Functional analysis of all nonribosomal peptide synthetases in Cochliobolus heterostrophus reveals a factor, NPS6, involved in virulence and resistance to oxidative stress. Eukaryotic Cell 4: 545-555
    • (2005) Eukaryotic Cell , vol.4 , pp. 545-555
    • Lee, B.-N.1    Kroken, S.2    Chou, D.Y.T.3    Robbertse, B.4    Yoder, O.C.5    Turgeon, B.G.6
  • 43
    • 84923677391 scopus 로고    scopus 로고
    • A novel sterol regulatory element-binding protein gene sreA identified in Penicillium digitatum is required for prochloraz resistance, full Virulence and erg11 (cyp51) regulation
    • Liu J, Yuan Y, Wu Z, Li N, Chen Y, et al. (2015) A novel sterol regulatory element-binding protein gene sreA identified in Penicillium digitatum is required for prochloraz resistance, full Virulence and erg11 (cyp51) regulation PLOS One 10: e0117115
    • (2015) PLOS One , vol.10
    • Liu, J.1    Yuan, Y.2    Wu, Z.3    Li, N.4    Chen, Y.5
  • 46
    • 84907781948 scopus 로고    scopus 로고
    • Plant disease management
    • Maloy OC (2005) Plant disease management. The Plant Health Instructor 10: DOI: 10.1094/PHI-I-2005-0202-1001
    • (2005) The Plant Health Instructor , vol.10
    • Maloy, O.C.1
  • 47
    • 84883177540 scopus 로고    scopus 로고
    • Comparative genomics of a plant-pathogenic fungus, Pyrenophora tritici-repentis, reveals transduplication and the impact of repeat elements on pathogenicity and population divergence
    • Manning VA, Pandelova I, Dhillon B, Wilhelm LJ, Goodwin SB, et al. (2013) Comparative genomics of a plant-pathogenic fungus, Pyrenophora tritici-repentis, reveals transduplication and the impact of repeat elements on pathogenicity and population divergence. Genes|Genomes|Genetics 3: 41-63
    • (2013) Genes|Genomes|Genetics , vol.3 , pp. 41-63
    • Manning, V.A.1    Pandelova, I.2    Dhillon, B.3    Wilhelm, L.J.4    Goodwin, S.B.5
  • 48
    • 72449164089 scopus 로고    scopus 로고
    • Acquisition of prokaryotic genes by fungal genomes
    • Marcet-Houben M, Gabaldón T (2010) Acquisition of prokaryotic genes by fungal genomes. Trends in Genetics 26: 5-8
    • (2010) Trends in Genetics , vol.26 , pp. 5-8
    • Marcet-Houben, M.1    Gabaldón, T.2
  • 49
    • 84869233554 scopus 로고    scopus 로고
    • Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus
    • Marcet-Houben M, Ballester A-R, de la Fuente B, Harries E, Marcos JF, et al. (2012) Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus. BMC Genomics 13: 1-18
    • (2012) BMC Genomics , vol.13 , pp. 1-18
    • Marcet-Houben, M.1    Ballester, A.-R.2    de la Fuente, B.3    Harries, E.4    Marcos, J.F.5
  • 51
    • 0036028757 scopus 로고    scopus 로고
    • Pathogen population genetics, evolutionary potential, and durable resistance
    • McDonald BA, Linde C (2002) Pathogen population genetics, evolutionary potential, and durable resistance. Annual Review of Phytopathology 40: 349-379
    • (2002) Annual Review of Phytopathology , vol.40 , pp. 349-379
    • McDonald, B.A.1    Linde, C.2
  • 54
    • 84865693932 scopus 로고    scopus 로고
    • Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses
    • O'Connell RJ, Thon MR, Hacquard S, Amyotte SG, Kleemann J, et al. (2012) Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses. Nature Genetics 44: 1060-1065
    • (2012) Nature Genetics , vol.44 , pp. 1060-1065
    • O'Connell, R.J.1    Thon, M.R.2    Hacquard, S.3    Amyotte, S.G.4    Kleemann, J.5
  • 55
    • 32644445902 scopus 로고    scopus 로고
    • Genomics, molecular targets and the discovery of antifungal drugs
    • Odds FC (2005) Genomics, molecular targets and the discovery of antifungal drugs. Revista Iberoamericana de Micología 22: 229-237
    • (2005) Revista Iberoamericana de Micología , vol.22 , pp. 229-237
    • Odds, F.C.1
  • 56
    • 84868159385 scopus 로고    scopus 로고
    • Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi
    • Ohm RA, Feau N, Henrissat B, Schoch CL, Horwitz BA, et al. (2012) Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi. PLOS Pathogens 8: e1003037
    • (2012) PLOS Pathogens , vol.8
    • Ohm, R.A.1    Feau, N.2    Henrissat, B.3    Schoch, C.L.4    Horwitz, B.A.5
  • 57
    • 84860511529 scopus 로고    scopus 로고
    • Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen
    • Olson Å, Aerts A, Asiegbu F, Belbahri L, Bouzid O, et al. (2012) Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. New Phytologist 194: 1001-1013
    • (2012) New Phytologist , vol.194 , pp. 1001-1013
    • Olson, Å.1    Aerts, A.2    Asiegbu, F.3    Belbahri, L.4    Bouzid, O.5
  • 58
    • 38549176698 scopus 로고    scopus 로고
    • CFGP: a webbased, comparative fungal genomics platform
    • Park J, Park B, Jung K, Jang S, Yu K, et al. (2008) CFGP: a webbased, comparative fungal genomics platform. Nucleic Acids Research 36: D562-D571
    • (2008) Nucleic Acids Research , vol.36 , pp. D562-D571
    • Park, J.1    Park, B.2    Jung, K.3    Jang, S.4    Yu, K.5
  • 59
    • 84931267244 scopus 로고    scopus 로고
    • Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus
    • Perlin MH, Amselem J, Fontanillas E, Toh SS, Chen Z, et al. (2015) Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus. BMC Genomics 16: 1-24
    • (2015) BMC Genomics , vol.16 , pp. 1-24
    • Perlin, M.H.1    Amselem, J.2    Fontanillas, E.3    Toh, S.S.4    Chen, Z.5
  • 60
    • 85012224997 scopus 로고    scopus 로고
    • Genomics-based marker discovery and diagnostic assay development for Wheat Blast
    • Pieck ML, Ruck A, Farman M, Peterson GL, Stack JP, et al. (2016) Genomics-based marker discovery and diagnostic assay development for Wheat Blast. Plant Disease: http://dx.doi. org/10.1094/PDIS-04-16-0500-RE
    • (2016) Plant Disease
    • Pieck, M.L.1    Ruck, A.2    Farman, M.3    Peterson, G.L.4    Stack, J.P.5
  • 61
    • 84861182813 scopus 로고    scopus 로고
    • Genome evolution in filamentous plant pathogens: why bigger can be better
    • Raffaele S, Kamoun S (2012) Genome evolution in filamentous plant pathogens: why bigger can be better. Nature Reviews Microbiology 10: 417-430
    • (2012) Nature Reviews Microbiology , vol.10 , pp. 417-430
    • Raffaele, S.1    Kamoun, S.2
  • 62
    • 85023625582 scopus 로고    scopus 로고
    • 5: a metadata management system based on a four level (meta) genome project classification. Nucleic Acids Research: gku950
    • Reddy T, Thomas AD, Stamatis D, Bertsch J, Isbandi M, et al. (2014) The Genomes OnLine Database (GOLD) v. 5: a metadata management system based on a four level (meta) genome project classification. Nucleic Acids Research: gku950
    • (2014) The Genomes OnLine Database (GOLD) v
    • Reddy, T.1    Thomas, A.D.2    Stamatis, D.3    Bertsch, J.4    Isbandi, M.5
  • 66
    • 78650100793 scopus 로고    scopus 로고
    • Pathogenicity determinants in smut fungi revealed by genome comparison
    • Schirawski J, Mannhaupt G, Münch K, Brefort T, Schipper K, et al. (2010) Pathogenicity determinants in smut fungi revealed by genome comparison. Science 330: 1546-1548
    • (2010) Science , vol.330 , pp. 1546-1548
    • Schirawski, J.1    Mannhaupt, G.2    Münch, K.3    Brefort, T.4    Schipper, K.5
  • 67
    • 77956097573 scopus 로고    scopus 로고
    • Studying plant-pathogen interactions in the genomics era: beyond molecular Koch's postulates to systems biology
    • Schneider DJ, Collmer A (2010) Studying plant-pathogen interactions in the genomics era: beyond molecular Koch's postulates to systems biology. Annual Review of Phytopathology 48: 457-479
    • (2010) Annual Review of Phytopathology , vol.48 , pp. 457-479
    • Schneider, D.J.1    Collmer, A.2
  • 68
    • 84864462544 scopus 로고    scopus 로고
    • A map of the cis-regulatory sequences in the mouse genome
    • Shen Y, Yue F, McCleary DF, Ye Z, Edsall L, et al. (2012) A map of the cis-regulatory sequences in the mouse genome. Nature 488: 116-120
    • (2012) Nature , vol.488 , pp. 116-120
    • Shen, Y.1    Yue, F.2    McCleary, D.F.3    Ye, Z.4    Edsall, L.5
  • 69
    • 79151477225 scopus 로고    scopus 로고
    • Horizontal transfer of a large and highly toxic secondary metabolic gene cluster between fungi
    • Slot JC, Rokas A (2011) Horizontal transfer of a large and highly toxic secondary metabolic gene cluster between fungi. Current Biology 21: 134-139
    • (2011) Current Biology , vol.21 , pp. 134-139
    • Slot, J.C.1    Rokas, A.2
  • 70
    • 84905465132 scopus 로고    scopus 로고
    • Horizontal gene transfer in eukaryotic plant pathogens
    • Soanes D, Richards TA (2014) Horizontal gene transfer in eukaryotic plant pathogens. Annual Review of Phytopathology 52: 583-614
    • (2014) Annual Review of Phytopathology , vol.52 , pp. 583-614
    • Soanes, D.1    Richards, T.A.2
  • 71
    • 78650122420 scopus 로고    scopus 로고
    • Genome expansion and gene loss in powdery mildew fungi reveal tradeoffs in extreme parasitism
    • Spanu PD, Abbott JC, Amselem J, Burgis TA, Soanes DM, S et al. (2010) Genome expansion and gene loss in powdery mildew fungi reveal tradeoffs in extreme parasitism. Science 330: 1543-1546
    • (2010) Science , vol.330 , pp. 1543-1546
    • Spanu, P.D.1    Abbott, J.C.2    Amselem, J.3    Burgis, T.A.4    Soanes, D.M.S.5
  • 72
    • 84869109892 scopus 로고    scopus 로고
    • 1000 fungal genomes to be sequenced
    • Spatafora J (2011) 1000 fungal genomes to be sequenced. IMA Fungus 2: (41)
    • (2011) IMA Fungus , vol.2 , Issue.41
    • Spatafora, J.1
  • 73
    • 84992209034 scopus 로고    scopus 로고
    • A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
    • Spatafora JW, Chang Y, Benny GL, Lazarus K, Smith ME, et al. (2016) A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data. Mycologia 108: 1028-1046
    • (2016) Mycologia , vol.108 , pp. 1028-1046
    • Spatafora, J.W.1    Chang, Y.2    Benny, G.L.3    Lazarus, K.4    Smith, M.E.5
  • 76
    • 82955200227 scopus 로고    scopus 로고
    • The making of a new pathogen: Insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species
    • Stukenbrock EH, Bataillon T, Dutheil JY, Hansen TT, Li R, Z et al. (2011) The making of a new pathogen: Insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species. Genome Research 21: 2157-2166
    • (2011) Genome Research , vol.21 , pp. 2157-2166
    • Stukenbrock, E.H.1    Bataillon, T.2    Dutheil, J.Y.3    Hansen, T.T.4    Li, R.Z.5
  • 77
    • 84875539053 scopus 로고    scopus 로고
    • Multiple interkingdom horizontal gene transfers in Pyrenophora and closely related species and their contributions to phytopathogenic lifestyles
    • Sun B-F, Xiao J-H, He S, Liu L, Murphy RW, Huang D-W (2013) Multiple interkingdom horizontal gene transfers in Pyrenophora and closely related species and their contributions to phytopathogenic lifestyles. PLOS One 8: e60029
    • (2013) PLOS One , vol.8
    • Sun, B.-F.1    Xiao, J.-H.2    He, S.3    Liu, L.4    Murphy, R.W.5    Huang, D.-W.6
  • 78
    • 84885468708 scopus 로고    scopus 로고
    • Genomewide investigation into DNA elements and ABC transporters involved in imazalil resistance in Penicillium digitatum
    • Sun X, Ruan R, Lin L, Zhu C, Zhang T, et al. (2013) Genomewide investigation into DNA elements and ABC transporters involved in imazalil resistance in Penicillium digitatum. FEMS Microbiology Letters 348: 11-18
    • (2013) FEMS Microbiology Letters , vol.348 , pp. 11-18
    • Sun, X.1    Ruan, R.2    Lin, L.3    Zhu, C.4    Zhang, T.5
  • 79
    • 26444604135 scopus 로고    scopus 로고
    • Cambridge MA: Whitehead Institute
    • The Fungal Genome Initiative Steering Commitee (2003) A White Paper for Fungal Comparative Genomics. Cambridge MA: Whitehead Institute; http://www.broadinstitute.org/annotation/fungi/fgi/FGI_02_whitepaper_2003.pdf
    • (2003) A White Paper for Fungal Comparative Genomics
  • 80
    • 85023632445 scopus 로고    scopus 로고
    • Cambridge, MA: The Broad Institute of Harvard and MIT
    • The Fungal Genome Initiative Steering Committee (2004) A White Paper for Fungal Genomics. Cambridge, MA: The Broad Institute of Harvard and MIT
    • (2004) A White Paper for Fungal Genomics
  • 81
    • 33745033975 scopus 로고    scopus 로고
    • The role of transposable element clusters in genome evolution and loss of synteny in the rice blast fungus Magnaporthe oryzae
    • Thon MR, Pan H, Diener S, Papalas J, Taro A, et al. (2006) The role of transposable element clusters in genome evolution and loss of synteny in the rice blast fungus Magnaporthe oryzae. Genome Biology 7: 1-9
    • (2006) Genome Biology , vol.7 , pp. 1-9
    • Thon, M.R.1    Pan, H.2    Diener, S.3    Papalas, J.4    Taro, A.5
  • 84
    • 84988311545 scopus 로고    scopus 로고
    • Living apart together: crosstalk between the core and supernumerary genomes in a fungal plant pathogen
    • Vanheule A, Audenaert K, Warris S, Van de Geest H, Schijlen E, et al. (2016) Living apart together: crosstalk between the core and supernumerary genomes in a fungal plant pathogen. BMC Genomics 17: 1-18
    • (2016) BMC Genomics , vol.17 , pp. 1-18
    • Vanheule, A.1    Audenaert, K.2    Warris, S.3    Van de Geest, H.4    Schijlen, E.5
  • 85
    • 84977552415 scopus 로고    scopus 로고
    • Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes
    • Wibberg D, Andersson L, Tzelepis G, Rupp O, Blom J, et al. (2016) Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes. BMC Genomics 17: 1-12
    • (2016) BMC Genomics , vol.17 , pp. 1-12
    • Wibberg, D.1    Andersson, L.2    Tzelepis, G.3    Rupp, O.4    Blom, J.5
  • 87
    • 84988972440 scopus 로고    scopus 로고
    • Using next-generation sequencing to develop molecular diagnostics for Pseudoperonospora cubensis, the Cucurbit Downy Mildew pathogen
    • Withers S, Gongora-Castillo E, Gent D, Thomas A, Ojiambo PS, Quesada-Ocampo LM (2016) Using next-generation sequencing to develop molecular diagnostics for Pseudoperonospora cubensis, the Cucurbit Downy Mildew pathogen. Phytopathology 106: 1105-1116
    • (2016) Phytopathology , vol.106 , pp. 1105-1116
    • Withers, S.1    Gongora-Castillo, E.2    Gent, D.3    Thomas, A.4    Ojiambo, P.S.5    Quesada-Ocampo, L.M.6
  • 88
    • 0036944312 scopus 로고    scopus 로고
    • Repetitive DNA elements in fungi (Mycota): impact on genomic architecture and evolution
    • Wöstemeyer J, Kreibich A (2002) Repetitive DNA elements in fungi (Mycota): impact on genomic architecture and evolution. Current Genetics 41: 189-198
    • (2002) Current Genetics , vol.41 , pp. 189-198
    • Wöstemeyer, J.1    Kreibich, A.2
  • 89
    • 84864647695 scopus 로고    scopus 로고
    • Sequencing the genome of Marssonina brunnea reveals fungus-poplar co-evolution
    • Zhu S, Cao Y-Z, Jiang C, Tan B-Y, Wang Z, et al. (2012) Sequencing the genome of Marssonina brunnea reveals fungus-poplar co-evolution. BMC Genomics 13: 382
    • (2012) BMC Genomics , vol.13 , pp. 382
    • Zhu, S.1    Cao, Y.-Z.2    Jiang, C.3    Tan, B.-Y.4    Wang, Z.5


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