메뉴 건너뛰기




Volumn 292, Issue 21, 2017, Pages 8553-8559

Microbial metabolites in health and disease: Navigating the unknown in search of function

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; BIOMOLECULES; DISEASE CONTROL; METABOLITES; RNA;

EID: 85019711051     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.R116.752899     Document Type: Review
Times cited : (107)

References (58)
  • 1
    • 84938244327 scopus 로고    scopus 로고
    • Human microbiota. Small molecules from the human microbiota
    • Donia, M. S., and Fischbach, M. A. (2015) Human microbiota. Small molecules from the human microbiota. Science 349, 1254766
    • (2015) Science , vol.349 , pp. 1254766
    • Donia, M.S.1    Fischbach, M.A.2
  • 3
    • 84979608055 scopus 로고    scopus 로고
    • An introduction to the analysis of shotgun metagenomic data
    • Sharpton, T. J. (2014) An introduction to the analysis of shotgun metagenomic data. Front. Plant Sci. 5, 209
    • (2014) Front. Plant Sci. , vol.5 , pp. 209
    • Sharpton, T.J.1
  • 6
    • 77957761759 scopus 로고    scopus 로고
    • METAREP: JCVI metagenomics reports-an open source tool for high-performance comparative metagenomics
    • Goll, J., Rusch, D. B., Tanenbaum, D. M., Thiagarajan, M., Li, K., Methe, B. A., and Yooseph, S. (2010) METAREP: JCVI metagenomics reports-an open source tool for high-performance comparative metagenomics. Bioinformatics 26, 2631-2632
    • (2010) Bioinformatics , vol.26 , pp. 2631-2632
    • Goll, J.1    Rusch, D.B.2    Tanenbaum, D.M.3    Thiagarajan, M.4    Li, K.5    Methe, B.A.6    Yooseph, S.7
  • 10
    • 0016778734 scopus 로고
    • Gnotobiotic animals in research: Their uses and limitations
    • Coates, M. E. (1975) Gnotobiotic animals in research: their uses and limitations. Lab. Anim. 9, 275-282
    • (1975) Lab. Anim. , vol.9 , pp. 275-282
    • Coates, M.E.1
  • 11
    • 84945289175 scopus 로고    scopus 로고
    • Use of germ-free animal models in microbiota-related research
    • Al-Asmakh, M., and Zadjali, F. (2015) Use of germ-free animal models in microbiota-related research. J. Microbiol. Biotechnol. 25, 1583-1588
    • (2015) J. Microbiol. Biotechnol. , vol.25 , pp. 1583-1588
    • Al-Asmakh, M.1    Zadjali, F.2
  • 12
    • 84941801496 scopus 로고    scopus 로고
    • Maintaining and monitoring the defined microbiota status of gnotobiotic rodents
    • Nicklas, W., Keubler, L., and Bleich, A. (2015) Maintaining and monitoring the defined microbiota status of gnotobiotic rodents. ILAR J. 56, 241-249
    • (2015) ILAR J. , vol.56 , pp. 241-249
    • Nicklas, W.1    Keubler, L.2    Bleich, A.3
  • 18
    • 84973480887 scopus 로고    scopus 로고
    • Analysis of exhaled breath volatile organic compounds in inflammatory bowel disease: A pilot study
    • Hicks, L. C., Huang, J., Kumar, S., Powles, S. T., Orchard, T. R., Hanna, G. B., and Williams, H. R. (2015) Analysis of exhaled breath volatile organic compounds in inflammatory bowel disease: a pilot study. J. Crohns Colitis 9, 731-737
    • (2015) J. Crohns Colitis , vol.9 , pp. 731-737
    • Hicks, L.C.1    Huang, J.2    Kumar, S.3    Powles, S.T.4    Orchard, T.R.5    Hanna, G.B.6    Williams, H.R.7
  • 19
    • 84940941884 scopus 로고    scopus 로고
    • MALDITOF mass spectrometry: An emerging technology for microbial identification and diagnosis
    • Singhal, N., Kumar, M., Kanaujia, P. K., and Virdi, J. S. (2015) MALDITOF mass spectrometry: an emerging technology for microbial identification and diagnosis. Front. Microbiol. 6, 791
    • (2015) Front. Microbiol. , vol.6 , pp. 791
    • Singhal, N.1    Kumar, M.2    Kanaujia, P.K.3    Virdi, J.S.4
  • 20
    • 77957809580 scopus 로고    scopus 로고
    • Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of clinically important yeast species
    • Stevenson, L. G., Drake, S. K., Shea, Y. R., Zelazny, A. M., and Murray, P. R. (2010) Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of clinically important yeast species. J. Clin. Microbiol. 48, 3482-3486
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 3482-3486
    • Stevenson, L.G.1    Drake, S.K.2    Shea, Y.R.3    Zelazny, A.M.4    Murray, P.R.5
  • 21
    • 84879428313 scopus 로고    scopus 로고
    • Identification of rare pathogenic bacteria in a clinical microbiology laboratory: Impact of matrix-assisted laser desorption ionization-time of flight mass spectrometry
    • Seng, P., Abat, C., Rolain, J. M., Colson, P., Lagier, J.-C., Gouriet, F., Fournier, P. E., Drancourt, M., La Scola, B., and Raoult, D. (2013) Identification of rare pathogenic bacteria in a clinical microbiology laboratory: impact of matrix-assisted laser desorption ionization-time of flight mass spectrometry. J. Clin. Microbiol. 51, 2182-2194
    • (2013) J. Clin. Microbiol. , vol.51 , pp. 2182-2194
    • Seng, P.1    Abat, C.2    Rolain, J.M.3    Colson, P.4    Lagier, J.-C.5    Gouriet, F.6    Fournier, P.E.7    Drancourt, M.8    La Scola, B.9    Raoult, D.10
  • 25
    • 36348980985 scopus 로고    scopus 로고
    • Current progress in computational metabolomics
    • Wishart, D. S. (2007) Current progress in computational metabolomics. Brief Bioinform. 8, 279-293
    • (2007) Brief Bioinform. , vol.8 , pp. 279-293
    • Wishart, D.S.1
  • 26
    • 84939536885 scopus 로고    scopus 로고
    • Computational approaches to natural product discovery
    • Medema, M. H., and Fischbach, M. A. (2015) Computational approaches to natural product discovery. Nat. Chem. Biol. 11, 639-648
    • (2015) Nat. Chem. Biol. , vol.11 , pp. 639-648
    • Medema, M.H.1    Fischbach, M.A.2
  • 28
    • 84872535919 scopus 로고    scopus 로고
    • Xenobiotics shape the physiology and gene expression of the active human gut microbiome
    • Maurice, C. F., Haiser, H. J., and Turnbaugh, P. J. (2013) Xenobiotics shape the physiology and gene expression of the active human gut microbiome. Cell 152, 39-50
    • (2013) Cell , vol.152 , pp. 39-50
    • Maurice, C.F.1    Haiser, H.J.2    Turnbaugh, P.J.3
  • 29
    • 84880439384 scopus 로고    scopus 로고
    • Predicting and manipulating cardiac drug inactivation by the human gut bacterium Eggerthella lenta
    • Haiser, H. J., Gootenberg, D. B., Chatman, K., Sirasani, G., Balskus, E. P., and Turnbaugh, P. J. (2013) Predicting and manipulating cardiac drug inactivation by the human gut bacterium Eggerthella lenta. Science 341, 295-298
    • (2013) Science , vol.341 , pp. 295-298
    • Haiser, H.J.1    Gootenberg, D.B.2    Chatman, K.3    Sirasani, G.4    Balskus, E.P.5    Turnbaugh, P.J.6
  • 30
    • 74949136754 scopus 로고    scopus 로고
    • In vitro interaction of L-dopa with bacterial adhesins of Helicobacter pylori: An explanation for clinical differences in bioavailability?
    • Niehues, M., and Hensel, A. (2009) In vitro interaction of L-dopa with bacterial adhesins of Helicobacter pylori: an explanation for clinical differences in bioavailability? J. Pharm. Pharmacol. 61, 1303-1307
    • (2009) J. Pharm. Pharmacol. , vol.61 , pp. 1303-1307
    • Niehues, M.1    Hensel, A.2
  • 31
    • 84907487928 scopus 로고    scopus 로고
    • Host-microbial interactions in the metabolism of therapeutic and diet-derived xenobiotics
    • Carmody, R. N., and Turnbaugh, P. J. (2014) Host-microbial interactions in the metabolism of therapeutic and diet-derived xenobiotics. J. Clin. Invest. 124, 4173-4181
    • (2014) J. Clin. Invest. , vol.124 , pp. 4173-4181
    • Carmody, R.N.1    Turnbaugh, P.J.2
  • 33
    • 84978852361 scopus 로고    scopus 로고
    • The human gut microbiome and its dysfunctions through the meta-omics prism
    • Mondot, S., and Lepage, P. (2016) The human gut microbiome and its dysfunctions through the meta-omics prism. Ann. N.Y. Acad. Sci. 1372, 9-19
    • (2016) Ann. N.Y. Acad. Sci. , vol.1372 , pp. 9-19
    • Mondot, S.1    Lepage, P.2
  • 34
    • 84884650652 scopus 로고    scopus 로고
    • Diet, microbes, and host genetics: The perfect storm in inflammatory bowel diseases
    • Leone, V., Chang, E. B., and Devkota, S. (2013) Diet, microbes, and host genetics: the perfect storm in inflammatory bowel diseases. J. Gastroenterol. 48, 315-321
    • (2013) J. Gastroenterol. , vol.48 , pp. 315-321
    • Leone, V.1    Chang, E.B.2    Devkota, S.3
  • 37
    • 84977507546 scopus 로고    scopus 로고
    • Microbial metabolism of dietary components to bioactive metabolites: Opportunities for new therapeutic interventions
    • Zhang, L. S., and Davies, S. S. (2016) Microbial metabolism of dietary components to bioactive metabolites: opportunities for new therapeutic interventions. Genome Med. 8, 46
    • (2016) Genome Med. , vol.8 , pp. 46
    • Zhang, L.S.1    Davies, S.S.2
  • 39
    • 0015349085 scopus 로고
    • Tryptophan metabolism in microorganisms
    • Nozaki, M., and Ishimura, Y. (1972) Tryptophan metabolism in microorganisms. Biochem. J. 128, 24P-25P
    • (1972) Biochem. J. , vol.128 , pp. 24P-25P
    • Nozaki, M.1    Ishimura, Y.2
  • 40
    • 76249101130 scopus 로고    scopus 로고
    • The bacterial signal indole increases epithelial-cell tight-junction resistance and attenuates indicators of inflammation
    • Bansal, T., Alaniz, R. C., Wood, T. K., and Jayaraman, A. (2010) The bacterial signal indole increases epithelial-cell tight-junction resistance and attenuates indicators of inflammation. Proc. Natl. Acad. Sci. U.S.A. 107, 228-233
    • (2010) Proc. Natl. Acad. Sci. U.S.A. , vol.107 , pp. 228-233
    • Bansal, T.1    Alaniz, R.C.2    Wood, T.K.3    Jayaraman, A.4
  • 41
    • 84894263389 scopus 로고    scopus 로고
    • Commensal bacteria-dependent indole production enhances epithelial barrier function in the colon
    • Shimada, Y., Kinoshita, M., Harada, K., Mizutani, M., Masahata, K., Kayama, H., and Takeda, K. (2013) Commensal bacteria-dependent indole production enhances epithelial barrier function in the colon. PLoS ONE 8, e80604
    • (2013) PLoS ONE , vol.8 , pp. e80604
    • Shimada, Y.1    Kinoshita, M.2    Harada, K.3    Mizutani, M.4    Masahata, K.5    Kayama, H.6    Takeda, K.7
  • 43
    • 84930818280 scopus 로고    scopus 로고
    • Aryl hydrocarbon receptor activation down-regulates IL-7 and reduces inflammation in a mouse model of DSS-induced colitis
    • Ji, T., Xu, C., Sun, L., Yu, M., Peng, K., Qiu, Y., Xiao, W., and Yang, H. (2015) Aryl hydrocarbon receptor activation down-regulates IL-7 and reduces inflammation in a mouse model of DSS-induced colitis. Dig. Dis. Sci. 60, 1958-1966
    • (2015) Dig. Dis. Sci. , vol.60 , pp. 1958-1966
    • Ji, T.1    Xu, C.2    Sun, L.3    Yu, M.4    Peng, K.5    Qiu, Y.6    Xiao, W.7    Yang, H.8
  • 47
    • 84964389293 scopus 로고    scopus 로고
    • From gut dysbiosis to altered brain function and mental illness: Mechanisms and pathways
    • Rogers, G. B., Keating, D. J., Young, R. L., Wong, M.-L., Licinio, J., and Wesselingh, S. (2016) From gut dysbiosis to altered brain function and mental illness: mechanisms and pathways. Mol. Psychiatry 21, 738-748
    • (2016) Mol. Psychiatry , vol.21 , pp. 738-748
    • Rogers, G.B.1    Keating, D.J.2    Young, R.L.3    Wong, M.-L.4    Licinio, J.5    Wesselingh, S.6
  • 54
    • 84959573656 scopus 로고    scopus 로고
    • Integrated metabolomics and metagenomics analysis of plasma and urine identified microbial metabolites associated with coronary heart disease
    • Feng, Q., Liu, Z., Zhong, S., Li, R., Xia, H., Jie, Z., Wen, B., Chen, X., Yan, W., Fan, Y., Guo, Z., Meng, N., Chen, J., Yu, X., Zhang, Z., et al. (2016) Integrated metabolomics and metagenomics analysis of plasma and urine identified microbial metabolites associated with coronary heart disease. Sci. Rep. 6, 22525
    • (2016) Sci. Rep. , vol.6 , pp. 22525
    • Feng, Q.1    Liu, Z.2    Zhong, S.3    Li, R.4    Xia, H.5    Jie, Z.6    Wen, B.7    Chen, X.8    Yan, W.9    Fan, Y.10    Guo, Z.11    Meng, N.12    Chen, J.13    Yu, X.14    Zhang, Z.15
  • 58
    • 84908293710 scopus 로고    scopus 로고
    • Differential modulation by Akkermansia muciniphila and Faecalibacterium prausnitzii of host peripheral lipid metabolism and histone acetylation in mouse gut organoids
    • Lukovac, S., Belzer, C., Pellis, L., Keijser, B. J., de Vos, W. M., Montijn, R. C., and Roeselers, G. (2014) Differential modulation by Akkermansia muciniphila and Faecalibacterium prausnitzii of host peripheral lipid metabolism and histone acetylation in mouse gut organoids. MBio 5, e01438
    • (2014) MBio , vol.5 , pp. e01438
    • Lukovac, S.1    Belzer, C.2    Pellis, L.3    Keijser, B.J.4    De Vos, W.M.5    Montijn, R.C.6    Roeselers, G.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.