메뉴 건너뛰기




Volumn 6, Issue 5, 2017, Pages 883-901

StrandAdvantage test for early-line and advanced-stage treatment decisions in solid tumors

(33)  Sen, Manimala a,b   Katragadda, Shanmukh a   Ravichandran, Aarthi a   Deshpande, Gouri a   Parulekar, Minothi a   Nayanala, Swetha a   Vittal, Vikram a   Shen, Weiming a   Phooi Nee Yong, Melanie a   Jacob, Jemima a   Parchuru, Sravanthi a,b   Dhanuskodi, Kalpana a,b   Eyring, Kenneth a   Agrawal, Pooja a   Agarwal, Smita a   Shanmugam, Ashwini a   Gupta, Satish a   Vishwanath, Divya a,b   Kumari, Kiran a,b   Hariharan, Arun K a,b   more..


Author keywords

Clinical utility; immunohistochemistry; next generation sequencing; solid tumors; standard of care therapy

Indexed keywords

ANAPLASTIC LYMPHOMA KINASE; DNA;

EID: 85017148866     PISSN: None     EISSN: 20457634     Source Type: Journal    
DOI: 10.1002/cam4.1037     Document Type: Article
Times cited : (4)

References (41)
  • 1
    • 84908460595 scopus 로고    scopus 로고
    • Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin
    • Hoadley, K. A., C. Yau, D. M. Wolf, A. D. Cherniack, D. Tamborero, S. Ng, et al. 2014. Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin. Cell 158:929–944.
    • (2014) Cell , vol.158 , pp. 929-944
    • Hoadley, K.A.1    Yau, C.2    Wolf, D.M.3    Cherniack, A.D.4    Tamborero, D.5    Ng, S.6
  • 2
    • 84879177690 scopus 로고    scopus 로고
    • Clinical responses to vemurafenib in patients with metastatic papillary thyroid cancer harboring BRAF(V600E) mutation
    • Kim, K. B., M. E. Cabanillas, A. J. Lazar, M. D. Williams, D. L. Sanders, J. L. Ilagan, et al. 2013. Clinical responses to vemurafenib in patients with metastatic papillary thyroid cancer harboring BRAF(V600E) mutation. Thyroid 23:1277–1283.
    • (2013) Thyroid , vol.23 , pp. 1277-1283
    • Kim, K.B.1    Cabanillas, M.E.2    Lazar, A.J.3    Williams, M.D.4    Sanders, D.L.5    Ilagan, J.L.6
  • 4
    • 84958984244 scopus 로고    scopus 로고
    • Lapatinib in gastric cancer: what is the logical next step?
    • Janjigian, Y. Y. 2016. Lapatinib in gastric cancer: what is the logical next step? J. Clin. Oncol. 34:401–403.
    • (2016) J. Clin. Oncol. , vol.34 , pp. 401-403
    • Janjigian, Y.Y.1
  • 5
    • 84938197903 scopus 로고    scopus 로고
    • Next-generation sequencing to guide cancer therapy
    • Gagan, J., and E. M. Van Allen. 2015. Next-generation sequencing to guide cancer therapy. Genome Med. 7:80.
    • (2015) Genome Med. , vol.7 , pp. 80
    • Gagan, J.1    Van Allen, E.M.2
  • 7
    • 84887491073 scopus 로고    scopus 로고
    • Development and validation of a clinical cancer genomic profiling test based on massively parallel DNA sequencing
    • Frampton, G. M., A. Fichtenholtz, G. A. Otto, K. Wang, S. R. Downing, J. He, et al. 2013. Development and validation of a clinical cancer genomic profiling test based on massively parallel DNA sequencing. Nat. Biotechnol. 31:1023–1031.
    • (2013) Nat. Biotechnol. , vol.31 , pp. 1023-1031
    • Frampton, G.M.1    Fichtenholtz, A.2    Otto, G.A.3    Wang, K.4    Downing, S.R.5    He, J.6
  • 8
    • 84882289495 scopus 로고    scopus 로고
    • Clinical validation of a next-generation sequencing screen for mutational hotspots in 46 cancer-related genes
    • Singh, R. R., K. P. Patel, M. J. Routbort, N. G. Reddy, B. A. Barkoh, B. Handal, et al. 2013. Clinical validation of a next-generation sequencing screen for mutational hotspots in 46 cancer-related genes. J. Mol. Diagn. 15:607–622.
    • (2013) J. Mol. Diagn. , vol.15 , pp. 607-622
    • Singh, R.R.1    Patel, K.P.2    Routbort, M.J.3    Reddy, N.G.4    Barkoh, B.A.5    Handal, B.6
  • 9
    • 84902148239 scopus 로고    scopus 로고
    • Whole-exome sequencing and clinical interpretation of formalin-fixed, paraffin-embedded tumor samples to guide precision cancer medicine
    • Van Allen, E. M., N. Wagle, P. Stojanov, D. L. Perrin, K. Cibulskis, S. Marlow, et al. 2014. Whole-exome sequencing and clinical interpretation of formalin-fixed, paraffin-embedded tumor samples to guide precision cancer medicine. Nat. Med. 20:682–688.
    • (2014) Nat. Med. , vol.20 , pp. 682-688
    • Van Allen, E.M.1    Wagle, N.2    Stojanov, P.3    Perrin, D.L.4    Cibulskis, K.5    Marlow, S.6
  • 11
    • 3343024502 scopus 로고    scopus 로고
    • Protein overexpression and gene amplification of HER-2 and EGFR in colorectal cancers: an immunohistochemical and fluorescent in situ hybridization study
    • Ooi, A., T. Takehana, X. Li, S. Suzuki, K. Kunitomo, H. Iino, et al. 2004. Protein overexpression and gene amplification of HER-2 and EGFR in colorectal cancers: an immunohistochemical and fluorescent in situ hybridization study. Mod. Pathol. 17:895–904.
    • (2004) Mod. Pathol. , vol.17 , pp. 895-904
    • Ooi, A.1    Takehana, T.2    Li, X.3    Suzuki, S.4    Kunitomo, K.5    Iino, H.6
  • 12
    • 78049443323 scopus 로고    scopus 로고
    • Proteomic changes resulting from gene copy number variations in cancer cells
    • Geiger, T., J. Cox, and M. Mann. 2010. Proteomic changes resulting from gene copy number variations in cancer cells. PLoS Genet. 6:e1001090.
    • (2010) PLoS Genet. , vol.6
    • Geiger, T.1    Cox, J.2    Mann, M.3
  • 13
    • 84882261506 scopus 로고    scopus 로고
    • Comparison of clinical targeted next-generation sequence data from formalin-fixed and fresh-frozen tissue specimens
    • Spencer, D. H., J. K. Sehn, H. J. Abel, M. A. Watson, J. D. Pfeifer, and E. J. Duncavage. 2013. Comparison of clinical targeted next-generation sequence data from formalin-fixed and fresh-frozen tissue specimens. J. Mol. Diagn. 15:623–633.
    • (2013) J. Mol. Diagn. , vol.15 , pp. 623-633
    • Spencer, D.H.1    Sehn, J.K.2    Abel, H.J.3    Watson, M.A.4    Pfeifer, J.D.5    Duncavage, E.J.6
  • 14
    • 70349556543 scopus 로고    scopus 로고
    • Personalized copy number and segmental duplication maps using next-generation sequencing
    • Alkan, C., J. M. Kidd, T. Marques-Bonet, G. Aksay, F. Antonacci, F. Hormozdiari, et al. 2009. Personalized copy number and segmental duplication maps using next-generation sequencing. Nat. Genet. 41:1061–1067.
    • (2009) Nat. Genet. , vol.41 , pp. 1061-1067
    • Alkan, C.1    Kidd, J.M.2    Marques-Bonet, T.3    Aksay, G.4    Antonacci, F.5    Hormozdiari, F.6
  • 15
    • 0035015886 scopus 로고    scopus 로고
    • The exogenous wild-type p14ARF gene induces growth arrest and promotes radiosensitivity in human lung cancer cell lines
    • Gao, N., Y. D. Hu, X. Y. Cao, J. Zhou, and S. L. Cao. 2001. The exogenous wild-type p14ARF gene induces growth arrest and promotes radiosensitivity in human lung cancer cell lines. J. Cancer Res. Clin. Oncol. 127:359–367.
    • (2001) J. Cancer Res. Clin. Oncol. , vol.127 , pp. 359-367
    • Gao, N.1    Hu, Y.D.2    Cao, X.Y.3    Zhou, J.4    Cao, S.L.5
  • 16
    • 0031739560 scopus 로고    scopus 로고
    • Characterization of paired tumor and non-tumor cell lines established from patients with breast cancer
    • Gazdar, A. F., V. Kurvari, A. Virmani, L. Gollahon, M. Sakaguchi, M. Westerfield, et al. 1998. Characterization of paired tumor and non-tumor cell lines established from patients with breast cancer. Int. J. Cancer 78:766–774.
    • (1998) Int. J. Cancer , vol.78 , pp. 766-774
    • Gazdar, A.F.1    Kurvari, V.2    Virmani, A.3    Gollahon, L.4    Sakaguchi, M.5    Westerfield, M.6
  • 17
    • 84880749878 scopus 로고    scopus 로고
    • Identification of a lung adenocarcinoma cell line with CCDC6-RET fusion gene and the effect of RET inhibitors in vitro and in vivo
    • Suzuki, M., H. Makinoshima, S. Matsumoto, A. Suzuki, S. Mimaki, K. Matsushima, et al. 2013. Identification of a lung adenocarcinoma cell line with CCDC6-RET fusion gene and the effect of RET inhibitors in vitro and in vivo. Cancer Sci. 104:896–903.
    • (2013) Cancer Sci. , vol.104 , pp. 896-903
    • Suzuki, M.1    Makinoshima, H.2    Matsumoto, S.3    Suzuki, A.4    Mimaki, S.5    Matsushima, K.6
  • 18
    • 36849065315 scopus 로고    scopus 로고
    • Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer
    • Rikova, K., A. Guo, Q. Zeng, A. Possemato, J. Yu, H. Haack, et al. 2007. Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer. Cell 131:1190–1203.
    • (2007) Cell , vol.131 , pp. 1190-1203
    • Rikova, K.1    Guo, A.2    Zeng, Q.3    Possemato, A.4    Yu, J.5    Haack, H.6
  • 19
    • 84859183431 scopus 로고    scopus 로고
    • Melanoma whole-exome sequencing identifies (V600E)B-RAF amplification-mediated acquired B-RAF inhibitor resistance
    • Shi, H., G. Moriceau, X. Kong, M. K. Lee, H. Lee, R. C. Koya, et al. 2012. Melanoma whole-exome sequencing identifies (V600E)B-RAF amplification-mediated acquired B-RAF inhibitor resistance. Nat. Commun. 3:724.
    • (2012) Nat. Commun. , vol.3 , pp. 724
    • Shi, H.1    Moriceau, G.2    Kong, X.3    Lee, M.K.4    Lee, H.5    Koya, R.C.6
  • 20
    • 84883347910 scopus 로고    scopus 로고
    • Mutation incidence and coincidence in non small-cell lung cancer: meta-analyses by ethnicity and histology (mutMap)
    • Dearden, S., J. Stevens, Y. L. Wu, and D. Blowers. 2013. Mutation incidence and coincidence in non small-cell lung cancer: meta-analyses by ethnicity and histology (mutMap). Ann. Oncol. 24:2371–2376.
    • (2013) Ann. Oncol. , vol.24 , pp. 2371-2376
    • Dearden, S.1    Stevens, J.2    Wu, Y.L.3    Blowers, D.4
  • 21
    • 84857781883 scopus 로고    scopus 로고
    • MYC gene amplification is often acquired in lethal distant breast cancer metastases of unamplified primary tumors
    • Singhi, A. D., A. Cimino-Mathews, R. B. Jenkins, F. Lan, S. R. Fink, H. Nassar, et al. 2012. MYC gene amplification is often acquired in lethal distant breast cancer metastases of unamplified primary tumors. Mod. Pathol. 25:378–387.
    • (2012) Mod. Pathol. , vol.25 , pp. 378-387
    • Singhi, A.D.1    Cimino-Mathews, A.2    Jenkins, R.B.3    Lan, F.4    Fink, S.R.5    Nassar, H.6
  • 23
    • 76649119826 scopus 로고    scopus 로고
    • Aurora-A gene is frequently amplified in basal-like breast cancer
    • Staff, S., J. Isola, M. Jumppanen, and M. Tanner. 2010. Aurora-A gene is frequently amplified in basal-like breast cancer. Oncol. Rep. 23:307–312.
    • (2010) Oncol. Rep. , vol.23 , pp. 307-312
    • Staff, S.1    Isola, J.2    Jumppanen, M.3    Tanner, M.4
  • 24
    • 77951627056 scopus 로고    scopus 로고
    • The chromosomal instability pathway in colon cancer
    • Pino, M. S., and D. C. Chung. 2010. The chromosomal instability pathway in colon cancer. Gastroenterology 138:2059–2072.
    • (2010) Gastroenterology , vol.138 , pp. 2059-2072
    • Pino, M.S.1    Chung, D.C.2
  • 25
    • 76649120544 scopus 로고    scopus 로고
    • Aurora kinase inhibitors–rising stars in cancer therapeutics?
    • Dar, A. A., L. W. Goff, S. Majid, J. Berlin, and W. El-Rifai. 2010. Aurora kinase inhibitors–rising stars in cancer therapeutics? Mol. Cancer Ther. 9:268–278.
    • (2010) Mol. Cancer Ther. , vol.9 , pp. 268-278
    • Dar, A.A.1    Goff, L.W.2    Majid, S.3    Berlin, J.4    El-Rifai, W.5
  • 26
    • 84894666732 scopus 로고    scopus 로고
    • Aurora kinase inhibition as an anticancer strategy
    • Hilton, J. F., and G. I. Shapiro. 2014. Aurora kinase inhibition as an anticancer strategy. J. Clin. Oncol. 32:57–59.
    • (2014) J. Clin. Oncol. , vol.32 , pp. 57-59
    • Hilton, J.F.1    Shapiro, G.I.2
  • 27
    • 84925440138 scopus 로고    scopus 로고
    • Prognostic value of FGFR gene amplification in patients with different types of cancer: a systematic review and meta-analysis
    • Chang, J., X. Liu, S. Wang, Z. Zhang, Z. Wu, X. Zhang, et al. 2014. Prognostic value of FGFR gene amplification in patients with different types of cancer: a systematic review and meta-analysis. PLoS ONE 9:e105524.
    • (2014) PLoS ONE , vol.9
    • Chang, J.1    Liu, X.2    Wang, S.3    Zhang, Z.4    Wu, Z.5    Zhang, X.6
  • 28
    • 68549122653 scopus 로고    scopus 로고
    • Chemoresponsiveness associated with canonical molecular changes in colorectal adenocarcinomas
    • Kim, J. C., S. A. Roh, D. H. Cho, T. W. Kim, S. N. Yoon, C. W. Kim, et al. 2009. Chemoresponsiveness associated with canonical molecular changes in colorectal adenocarcinomas. Anticancer Res. 29:3115–3123.
    • (2009) Anticancer Res. , vol.29 , pp. 3115-3123
    • Kim, J.C.1    Roh, S.A.2    Cho, D.H.3    Kim, T.W.4    Yoon, S.N.5    Kim, C.W.6
  • 29
    • 67749148920 scopus 로고    scopus 로고
    • Prognostic significance of interaction between somatic APC mutations and 5-fluorouracil adjuvant chemotherapy in Taiwanese colorectal cancer subjects
    • Chen, S. P., C. C. Wu, S. Z. Lin, J. C. Kang, C. C. Su, Y. L. Chen, et al. 2009. Prognostic significance of interaction between somatic APC mutations and 5-fluorouracil adjuvant chemotherapy in Taiwanese colorectal cancer subjects. Am. J. Clin. Oncol. 32:122–126.
    • (2009) Am. J. Clin. Oncol. , vol.32 , pp. 122-126
    • Chen, S.P.1    Wu, C.C.2    Lin, S.Z.3    Kang, J.C.4    Su, C.C.5    Chen, Y.L.6
  • 30
    • 84924583833 scopus 로고    scopus 로고
    • Targeting the DNA replication checkpoint by pharmacologic inhibition of Chk1 kinase: a strategy to sensitize APC mutant colon cancer cells to 5-fluorouracil chemotherapy
    • Martino-Echarri, E., B. R. Henderson, and M. G. Brocardo. 2014. Targeting the DNA replication checkpoint by pharmacologic inhibition of Chk1 kinase: a strategy to sensitize APC mutant colon cancer cells to 5-fluorouracil chemotherapy. Oncotarget 5:9889–9900.
    • (2014) Oncotarget , vol.5 , pp. 9889-9900
    • Martino-Echarri, E.1    Henderson, B.R.2    Brocardo, M.G.3
  • 31
    • 84932627972 scopus 로고    scopus 로고
    • The 2015 Oncology Drug Pipeline: Innovation Drives the Race to Cure Cancer
    • Buffery, D. 2015. The 2015 Oncology Drug Pipeline: Innovation Drives the Race to Cure Cancer. Am. Health Drug Benefits 8:216–222.
    • (2015) Am. Health Drug Benefits , vol.8 , pp. 216-222
    • Buffery, D.1
  • 32
    • 77449130761 scopus 로고    scopus 로고
    • Microsatellite instability in colorectal cancer
    • Boland, C. R., and A. Goel. 2010. Microsatellite instability in colorectal cancer. Gastroenterology 138:2073––87 e3.
    • (2010) Gastroenterology , vol.138
    • Boland, C.R.1    Goel, A.2
  • 34
    • 70349741007 scopus 로고    scopus 로고
    • Identification of novel gene amplifications in breast cancer and coexistence of gene amplification with an activating mutation of PIK3CA
    • Kadota, M., M. Sato, B. Duncan, A. Ooshima, H. H. Yang, N. Diaz-Meyer, et al. 2009. Identification of novel gene amplifications in breast cancer and coexistence of gene amplification with an activating mutation of PIK3CA. Cancer Res. 69:7357–7365.
    • (2009) Cancer Res. , vol.69 , pp. 7357-7365
    • Kadota, M.1    Sato, M.2    Duncan, B.3    Ooshima, A.4    Yang, H.H.5    Diaz-Meyer, N.6
  • 35
    • 84906854269 scopus 로고    scopus 로고
    • Targeting c-Met in melanoma: mechanism of resistance and efficacy of novel combinatorial inhibitor therapy
    • Etnyre, D., A. L. Stone, J. T. Fong, R. J. Jacobs, S. B. Uppada, G. M. Botting, et al. 2014. Targeting c-Met in melanoma: mechanism of resistance and efficacy of novel combinatorial inhibitor therapy. Cancer Biol. Ther. 15:1129–1141.
    • (2014) Cancer Biol. Ther. , vol.15 , pp. 1129-1141
    • Etnyre, D.1    Stone, A.L.2    Fong, J.T.3    Jacobs, R.J.4    Uppada, S.B.5    Botting, G.M.6
  • 37
    • 77950278598 scopus 로고    scopus 로고
    • FGFR1 amplification drives endocrine therapy resistance and is a therapeutic target in breast cancer
    • Turner, N., A. Pearson, R. Sharpe, M. Lambros, F. Geyer, M. A. Lopez-Garcia, et al. 2010. FGFR1 amplification drives endocrine therapy resistance and is a therapeutic target in breast cancer. Cancer Res. 70:2085–2094.
    • (2010) Cancer Res. , vol.70 , pp. 2085-2094
    • Turner, N.1    Pearson, A.2    Sharpe, R.3    Lambros, M.4    Geyer, F.5    Lopez-Garcia, M.A.6
  • 38
    • 84888391516 scopus 로고    scopus 로고
    • ESR1 ligand-binding domain mutations in hormone-resistant breast cancer
    • Toy, W., Y. Shen, H. Won, B. Green, R. A. Sakr, M. Will, et al. 2013. ESR1 ligand-binding domain mutations in hormone-resistant breast cancer. Nat. Genet. 45:1439–1445.
    • (2013) Nat. Genet. , vol.45 , pp. 1439-1445
    • Toy, W.1    Shen, Y.2    Won, H.3    Green, B.4    Sakr, R.A.5    Will, M.6
  • 39
    • 84884559238 scopus 로고    scopus 로고
    • Endocrine-therapy-resistant ESR1 variants revealed by genomic characterization of breast-cancer-derived xenografts
    • Li, S., D. Shen, J. Shao, R. Crowder, W. Liu, A. Prat, et al. 2013. Endocrine-therapy-resistant ESR1 variants revealed by genomic characterization of breast-cancer-derived xenografts. Cell Rep. 4:1116–1130.
    • (2013) Cell Rep. , vol.4 , pp. 1116-1130
    • Li, S.1    Shen, D.2    Shao, J.3    Crowder, R.4    Liu, W.5    Prat, A.6
  • 40
    • 33644984327 scopus 로고    scopus 로고
    • Fulvestrant in women with advanced breast cancer after progression on prior aromatase inhibitor therapy: North Central Cancer Treatment Group Trial N0032
    • Ingle, J. N., V. J. Suman, K. M. Rowland, D. Mirchandani, A. M. Bernath, J. K. Camoriano, et al. 2006. Fulvestrant in women with advanced breast cancer after progression on prior aromatase inhibitor therapy: North Central Cancer Treatment Group Trial N0032. J. Clin. Oncol. 24:1052–1056.
    • (2006) J. Clin. Oncol. , vol.24 , pp. 1052-1056
    • Ingle, J.N.1    Suman, V.J.2    Rowland, K.M.3    Mirchandani, D.4    Bernath, A.M.5    Camoriano, J.K.6
  • 41
    • 84964770218 scopus 로고    scopus 로고
    • Impact of molecular profiling on overall survival of patients with advanced ovarian cancer
    • Herzog, T. J., D. Spetzler, N. Xiao, K. Burnett, T. Maney, A. Voss, et al. 2016. Impact of molecular profiling on overall survival of patients with advanced ovarian cancer. Oncotarget 7:19840–19849.
    • (2016) Oncotarget , vol.7 , pp. 19840-19849
    • Herzog, T.J.1    Spetzler, D.2    Xiao, N.3    Burnett, K.4    Maney, T.5    Voss, A.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.