Red blood cell proteomics update: Is there more to discover?

Blood Transfusion

Volumn 15, Issue 2, 2017, Pages 182-187

  D'Alessandro, Angelo ^a   Dzieciatkowska, Monika ^a   Nemkov, Travis ^a   Hansen, Kirk C ^a  

^a UNIVERSITY OF COLORADO SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEOME; GLUCOSE;

ARTICLE; BLOOD SAMPLING; ERYTHROCYTE; ERYTHROCYTE TRANSFUSION; HUMAN; LIQUID CHROMATOGRAPHY-MASS SPECTROMETRY; METABOLOMICS; NORMAL HUMAN; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEOMICS; CHEMISTRY; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; METABOLISM; PROCEDURES;

CHROMATOGRAPHY, LIQUID; ERYTHROCYTES; GLUCOSE; HUMANS; MASS SPECTROMETRY; METABOLOMICS; PROTEOME; PROTEOMICS;

EID: 85016012245     PISSN: 17232007     EISSN: None     Source Type: Journal    
DOI: 10.2450/2017.0293-16     Document Type: Article

References (23)

1. Bianconi E, Piovesan A, Facchin F, et al. An estimation of the number of cells in the human body. Ann Hum Biol 2013; 40: 463-71.
2. Sender R, Fuchs S, Milo R. Revised estimates for the number of human and bacteria cells in the body. PLoS Biol 2016; 14: e1002533.
3. Ballas SK. Erythrocyte concentration and volume are inversely related. Clin Chim Acta 1987; 164: 243-4.
4. D'Alessandro A, Kriebardis AG, Rinalducci S, et al. An update on red blood cell storage lesions, as gleaned through biochemistry and omics technologies. Transfusion 2015; 55: 205-19.
5. Low TY, Seow TK, Chung MC. Separation of human erythrocyte membrane associated proteins with onedimensional and two-dimensional gel electrophoresis followed by identification with matrix-assisted laser desorption/ ionization-time of flight mass spectrometry. Proteomics 2002; 2: 1229-39.
6. Tyan Y-C, Jong S-B, Liao J-D, et al. Proteomic profiling of erythrocyte proteins by proteolytic digestion chip and identification using two-dimensional electrospray ionization tandem mass spectrometry. J. Proteome Res 2005; 4: 748-57.
7. Kakhniashvili DG, Bulla LA, Goodman SR. The human erythrocyte proteome analysis by ion trap mass spectrometry. Mol Cell Proteomics 2004; 3: 501-9.
8. Pasini EM, Kirkegaard M, Mortensen P, et al. In-depth analysis of the membrane and cytosolic proteome of red blood cells. Blood 2006; 108: 791-801.
9. Goodman SR, Kurdia A, Ammann L, et al. The human red blood cell proteome and interactome. Exp Biol Med 2007; 232: 1391-408.
10. Bachi A, Sim C, Restuccia U, et al. Performance of combinatorial peptide libraries in capturing the low-abundance proteome of red blood cells. 2. Behavior of resins containing individual amino acids. Anal Chem 2008; 80: 3557-65.
11. Roux-Dalvai F, Gonzalez de Peredo A, Sim C, et al. Extensive analysis of the cytoplasmic proteome of human erythrocytes using the peptide ligand library technology and advanced mass spectrometry. Mol Cell Proteomics 2008; 7: 2254-69.
12. Wilson MC, Trakarnsanga K, Heesom KJ, et al. Comparison of the proteome of adult and cord erythroid cells, and changes in the proteome following reticulocyte maturation. Mol Cell Proteomics 2016; 15: 1938-46.
13. Goodman SR, Daescu O, Kakhniashvili DG, Zivanic M. The proteomics and interactomics of human erythrocytes. Exp Biol Med 2013; 238: 509-18.
14. D'Alessandro A, Righetti PG, Zolla L. The red blood cell proteome and interactome: an update. J Proteome Res 2010; 9: 144-63.
15. Kim M-S, Pinto SM, Getnet D, et al. A draft map of the human proteome. Nature 2014; 509: 575-81.
16. Wilhelm M, Schlegl J, Hahne H, et al. Mass-spectrometrybased draft of the human proteome. Nature 2014; 509: 582-7.
17. Dzieciatkowska M, Hill R, Hansen KC. GeLC-MS/MS analysis of complex protein mixtures. Methods Mol Biol 2014; 1156: 53-66.
18. D'Alessandro A, Nemkov T, Kelher M, et al. Routine storage of red blood cell (RBC) units in additive solution-3: a comprehensive investigation of the RBC metabolome. Transfusion 2015; 55: 1155-68.
19. Reisz JA, Wither MJ, Dzieciatkowska M, et al. Oxidative modifications of glyceraldehyde 3-phosphate dehydrogenase regulate metabolic reprogramming of stored red blood cells. Blood 2016; 128: e32-42.
20. Ringrose JH, van Solinge WW, Mohammed S, et al. Highly efficient depletion strategy for the two most abundant erythrocyte soluble proteins improves proteome coverage dramatically. J Proteome Res 2008; 7: 3060-3.
21. D'Amici GM, Rinalducci S, Zolla L. Depletion of hemoglobin and carbonic anhydrase from erythrocyte cytosolic samples by preparative clear native electrophoresis. Nat Protoc 2012; 7: 36-44.
22. Ellinger JJ, Lewis IA, Markley JL. Role of aminotransferases in glutamate metabolism of human erythrocytes. J Biomol NMR 2011; 49: 221-9.
23. Zhang Y, Berka V, Song A, et al. Elevated sphingosine-1-phosphate promotes sickling and sickle cell disease progression. J Clin Invest 2014; 124: 2750-61.