Proteomic profiling of erythrocyte proteins by proteolytic digestion chip and identification using two-dimensional electrospray ionization tandem mass spectrometry

Journal of Proteome Research

Volumn 4, Issue 3, 2005, Pages 748-757

  Tyan, Yu Chang ^a   Jong, Shiang Bin ^b   Liao, Jiunn Der ^a   Liao, Pao Chi ^a   Yang, Ming Hui ^c   Liu, Chia Yuan ^a   Klauser, Ruth ^d   Himmelhaus, Michael ^e   Grunze, Michael ^e  

^a NATIONAL CHENG KUNG UNIVERSITY   (Taiwan)

^b KAOHSIUNG MEDICAL UNIVERSITY   (Taiwan)

^c TEXAS CHRISTIAN UNIVERSITY   (United States)

^d NATIONAL SYNCHROTRON RADIATION RESEARCH CENTER   (Taiwan)

^e UNIVERSITY OF HEIDELBERG   (Germany)

Author keywords

Protein digestion; Proteomics; Self assembled monolayers (SAMs); Two dimensional nano high performance liquid chromatography electrospray ionization tandem mass spectrometry (2D nano HPLC ESI MS MS)

Indexed keywords

PLASMA PROTEIN; TRYPSIN;

ADULT; ARTICLE; BLOOD SAMPLING; ELECTRON TRANSPORT; ELECTROSPRAY MASS SPECTROMETRY; ERYTHROCYTE; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HUMAN; HUMAN EXPERIMENT; INFRARED SPECTROSCOPY; MOLECULAR INTERACTION; NORMAL HUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DEGRADATION; PROTEIN LOCALIZATION; PROTEIN STRUCTURE; PROTEOMICS; SURFACE PROPERTY; TANDEM MASS SPECTROMETRY; X RAY PHOTOELECTRON SPECTROSCOPY;

ADULT; ERYTHROCYTES; HUMANS; MICROCHIP ANALYTICAL PROCEDURES; PEPTIDE HYDROLASES; PROTEINS; PROTEOMICS; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; SPECTROSCOPY, FOURIER TRANSFORM INFRARED; TRYPSIN;

EID: 20844445270     PISSN: 15353893     EISSN: None     Source Type: Journal    
DOI: 10.1021/pr0497780     Document Type: Article

References (44)

1. Tyers, M.; Mann, M. Nature 2003, 422, 193-197.
2. Fujii, K.; Nakano, T.; Kawamura, T.; Usui, F.; Bando, Y.; Wang, R.; Nishimura, T. J. Proteome Res. 2004, 3, 712-718.
3. Hamler, R. L.; Zhu, K.; Buchanan, N. S.; Kreunin, P.; Kachmam, M. T.; Miller, F. R.; Lubman, D. M. Proteomics 2004, 4, 562-577.
4. Wolters, D. A.; Washburn, M. P.; Yates, J. R. Anal. Chem. 2001, 73, 5683-5690.
5. Horne, J. C.; Blanchard, G. J. J. Am. Chem. Soc. 1998, 120, 6336-6344.
6. Morhard, F.; Schumacher, J.; Lenenbach, A.; Wilhelm, T.; Dahint, R.; Grunze, M.; Everhart, D. S. Proc.-Electrochem. Soc. 1997, 19, 1058-1065.
7. Bierbaum, K.; Grunze, M.; Baski, A. A.; Chi, L. F.; Schrepp, W.; Fuchs, H. Langmuir 1995, 11, 2143-2150.
8. Schertel, A.; Woll, C.; Grunze, M. J. Phys. 1997, 7, 537-538.
9. Yan, C.; Zharnikov, M.; Goelzhaeuser, A.; Grunze, M. Langmuir 2000, 16, 6208-6215.
10. Himmel, H. J.; Weiss, K.; Jaeger, B.; Dannenberger, O.; Grunze, M.; Woell, C. Langmuir 1997, 13, 4943-4947.
11. Jung, C.; Dannenberger, O.; Xu, Y.; Buck, M.; Grunze, M. Langmuir 1998, 14, 1103-1107.
12. Bain, C. D.; Troughton, E. B.; Tao, Y.; Evall, J.; Whitesides, G. M.; Nuzzo, R. G. J. Am. Chem. Soc. 1989, 111, 321-335.
13. Ulman, A. An Introduction to Ultrathin Origanic Films; Academic Press: San Diego, 1991.
14. Dubois, L. H.; Nuzzo, R. G. Annu. Rev. Phy. Chem. 1992, 43, 437-463.
15. Ulman, A. Chem. Rev. 1996, 96, 1533-1554.
16. Laibinis, P. E.; Nuzzo, R. G. J. Phys. Chem. 1992, 96, 5097-5105.
17. Joyce, S. A.; Thomas, R. C.; Houston, J. E.; Michalske, T. A.; Crooks, R. M. Phys. Rev. Lett. 1992, 68, 2790-2793.
18. Gooding, J. J.; Hibbert, D. B. Trends Anal. Chem. 1999, 18, 525-533.
19. Erdelen, C.; Häussling, L.; Naumann, R.; Ringsdorf, H.; Wolf, H.; Yang, J.; Liley, M.; Spinke, J.; Knoll, W. Langmuir 1994, 10, 1246-1250.
20. Laibinis, P. E.; Whitesides, G. M. J. Am. Chem. Soc. 1992, 114, 9022-9028.
21. Buerk, D. G. Biosensor: Theory and Applications; Technol. Pub. Comput. Inc.: New York, 1993.
22. Kang, I. K.; Kwon, B. K.; Lee, J. H.; Lee, H. B. Biomaterials 1993, 14, 792-797.
23. Tyan, Y. C.; Liao, J. D.; Kalause, R.; Wu, I. D.; Weng, C. C. Biomaterials 2002, 23, 65-76.
24. Frey, B. L.; Corn, R. M. Anal. Chem. 1996, 68, 3187-3193.
25. Smith, E. L.; Alves, C. A.; Andereg, J. W.; Porter, M. D.; Siperko, L. M. Langmuir 1992, 8, 2707-2714.
26. Sun, L.; Crooks, R. M.; Ricco, A. J. Langmuir 1993, 9, 1775-1780.
27. Miura, Y.; Kimura, S.; Imanishi, Y.; Umemura, J. Langmuir 1999, 15, 1155-1160.
28. Delden, C. J.; Lens, J. P.; Kooyman, R. P. H.; Engbers, G. H. M.; Feijen, J. Biomaterials 1997, 18, 845-852.
29. Kuijpers, A. J.; Wachem, P. B.; Luyn, M. J. A.; Brouwer, L. A.; Engbers, G. H. M.; Krijgsveld, I.; Zaat, S. A. J.; Dankert, J.; Feijen, J. Biomaterials 2000, 21, 1763-1772.
30. Yang, J. M.; Wang, M. C.; Hsu, Y. G.; Chang, V. H.; Lo, S. K. J. Appl. Polym. Sci. 1998, 138, 19-27.
31. Yang, J. M.; Jong, Y. J.; Hsu, K. Y.; Chang, C. H. J. Biomed. Mater. Res. 1998, 39, 86-91.
32. Lestelius, M.; Liedberg, B.; Tengvall, P. Langmuir 1997, 13, 5900-5908.
33. Marcus, K.; Immler, D.; Sternberger, J.; Meyer, H. E. Electrophoresis 2000, 21, 2622-2636.
34. Bradford, M. M. Anal. Biochem. 1976, 72, 248-254.
35. Schwartz, H.; Mitulovic, G.; Soest, R. V.; Gils, M. V.; VerBerkmoes, N.; Hettich, R. PharmaGenomics 2002, July, 42-50.
36. Wolters, D. A.; Washburn, M. P.; Yate, III, J. R. Anal. Chem. 2001, 73, 5683-5690.
37. Noble-Luginbuhl, A. R.; Nuzzo, R. G. Langmuir 2001, 17, 3937-3944.
38. Chidsey, C. E. D.; Loiacono, D. N. Langmuir 1990, 6, 682-691.
39. Laibinis, P. E.; Whitesides, G. M.; Allara, D. L.; Tao, Y. T.; Parikh, A. N.; Nuzzo, R. G. J. Am. Chem. Soc. 1991, 113, 7152-7167.
40. Ito, Y.; Kajihara, M.; Imanishi, Y. J. Biomed. Mater. Res. 1991, 25, 1325-1337.
41. Tyan, Y. C.; Liao, J. D.; Lin, S. P.; Chen, C. C. J. Biomed. Mater. Res. 2002, 67A, 1033-1043.
42. Moulder, J. F.; Stickle, W. F.; Sobol, P. E.; Bomben, K. D. Handbook of X-ray Photoelectron Spectroscopy; Physical Electronics, Inc.: Eden Prairie, Minnesota, 1995; 42-43.
43. Beamson, G.; Briggs, D. High-Resolution XPS of Organic Polymers. The Scienta ESCA300 Database; Wiley & Sons Inc.: New York, 1992.
44. O'Donovan, C.; Martin, M. J.; Gattiker, A.; Gasteiger, E.; Bairoch, A.; Apweiler, R. Brief. Bioinform. 2002, 3, 275-284.