-
1
-
-
81055144784
-
Autophagy: renovation of cells and tissues
-
22078875
-
Mizushima N, Komatsu M. Autophagy:renovation of cells and tissues. Cell 2011; 147:728-41; PMID:22078875; http://dx.doi.org/10.1016/j.cell.2011.10.026
-
(2011)
Cell
, vol.147
, pp. 728-741
-
-
Mizushima, N.1
Komatsu, M.2
-
2
-
-
0002697457
-
Regulation of autophagic protein degradation in isolated liver cells
-
Glaumann H., Ballard F.J., (eds), London: Academic Press
-
Seglen PO. Regulation of autophagic protein degradation in isolated liver cells. In:Glaumann H, Ballard FJ, ed. Lysosomes:Their Role in Protein Breakdown. London:Academic Press, 1987:371-414
-
(1987)
Lysosomes: Their Role in Protein Breakdown
, pp. 371-414
-
-
Seglen, P.O.1
-
3
-
-
84959930214
-
An overview of macroautophagy in yeast
-
26908221
-
Wen X, Klionsky DJ. An overview of macroautophagy in yeast. J Mol Biol 2016; 428:1681-99; PMID:26908221; http://dx.doi.org/10.1016/j.jmb.2016.02.021
-
(2016)
J Mol Biol
, vol.428
, pp. 1681-1699
-
-
Wen, X.1
Klionsky, D.J.2
-
4
-
-
79952355107
-
Selective autophagy mediated by autophagic adapter proteins
-
21189453
-
Johansen T, Lamark T. Selective autophagy mediated by autophagic adapter proteins. Autophagy 2011; 7:279-96; PMID:21189453; http://dx.doi.org/10.4161/auto.7.3.14487
-
(2011)
Autophagy
, vol.7
, pp. 279-296
-
-
Johansen, T.1
Lamark, T.2
-
5
-
-
84892859905
-
Interactions between autophagy receptors and ubiquitin-like proteins form the molecular basis for selective autophagy
-
24462201
-
Rogov V, Dotsch V, Johansen T, Kirkin V. Interactions between autophagy receptors and ubiquitin-like proteins form the molecular basis for selective autophagy. Mol Cell 2014; 53:167-78; PMID:24462201; http://dx.doi.org/10.1016/j.molcel.2013.12.014
-
(2014)
Mol Cell
, vol.53
, pp. 167-178
-
-
Rogov, V.1
Dotsch, V.2
Johansen, T.3
Kirkin, V.4
-
6
-
-
0024299286
-
Prelysosomal convergence of autophagic and endocytic pathways
-
3126737
-
Gordon PB, Seglen PO. Prelysosomal convergence of autophagic and endocytic pathways. Biochem Biophys Res Commun 1988; 151:40-7; PMID:3126737; http://dx.doi.org/10.1016/0006-291X(88)90556-6
-
(1988)
Biochem Biophys Res Commun
, vol.151
, pp. 40-47
-
-
Gordon, P.B.1
Seglen, P.O.2
-
7
-
-
84892875805
-
At the end of the autophagic road: an emerging understanding of lysosomal functions in autophagy
-
24369758
-
Shen HM, Mizushima N. At the end of the autophagic road:an emerging understanding of lysosomal functions in autophagy. Trends Biochem Sci 2014; 39:61-71; PMID:24369758; http://dx.doi.org/10.1016/j.tibs.2013.12.001
-
(2014)
Trends Biochem Sci
, vol.39
, pp. 61-71
-
-
Shen, H.M.1
Mizushima, N.2
-
8
-
-
0027424777
-
Isolation and characterization of autophagy-defective mutants of Saccharomyces cerevisiae
-
8224160
-
Tsukada M, Ohsumi Y. Isolation and characterization of autophagy-defective mutants of Saccharomyces cerevisiae. FEBS Lett 1993; 333:169-74; PMID:8224160; http://dx.doi.org/10.1016/0014-5793(93)80398-E
-
(1993)
FEBS Lett
, vol.333
, pp. 169-174
-
-
Tsukada, M.1
Ohsumi, Y.2
-
9
-
-
80054025654
-
The role of Atg proteins in autophagosome formation
-
21801009
-
Mizushima N, Yoshimori T, Ohsumi Y. The role of Atg proteins in autophagosome formation. Annu Rev Cell Dev Biol 2011; 27:107-32; PMID:21801009; http://dx.doi.org/10.1146/annurev-cellbio-092910-154005
-
(2011)
Annu Rev Cell Dev Biol
, vol.27
, pp. 107-132
-
-
Mizushima, N.1
Yoshimori, T.2
Ohsumi, Y.3
-
10
-
-
79960878784
-
Atg8: an autophagy-related ubiquitin-like protein family
-
21867568
-
Shpilka T, Weidberg H, Pietrokovski S, Elazar Z. Atg8:an autophagy-related ubiquitin-like protein family. Genome Biol 2011; 12:226; PMID:21867568; http://dx.doi.org/10.1186/gb-2011-12-7-226
-
(2011)
Genome Biol
, vol.12
, pp. 226
-
-
Shpilka, T.1
Weidberg, H.2
Pietrokovski, S.3
Elazar, Z.4
-
11
-
-
0034707036
-
A ubiquitin-like system mediates protein lipidation
-
11100732
-
Ichimura Y, Kirisako T, Takao T, Satomi Y, Shimonishi Y, Ishihara N, Mizushima N, Tanida I, Kominami E, Ohsumi M, et al. A ubiquitin-like system mediates protein lipidation. Nature 2000; 408:488-92; PMID:11100732; http://dx.doi.org/10.1038/35044114
-
(2000)
Nature
, vol.408
, pp. 488-492
-
-
Ichimura, Y.1
Kirisako, T.2
Takao, T.3
Satomi, Y.4
Shimonishi, Y.5
Ishihara, N.6
Mizushima, N.7
Tanida, I.8
Kominami, E.9
Ohsumi, M.10
-
12
-
-
0034329418
-
LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing
-
11060023
-
Kabeya Y, Mizushima N, Ueno T, Yamamoto A, Kirisako T, Noda T, Kominami E, Ohsumi Y, Yoshimori T. LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing. EMBO J 2000; 19:5720-8; PMID:11060023; http://dx.doi.org/10.1093/emboj/19.21.5720
-
(2000)
EMBO J
, vol.19
, pp. 5720-5728
-
-
Kabeya, Y.1
Mizushima, N.2
Ueno, T.3
Yamamoto, A.4
Kirisako, T.5
Noda, T.6
Kominami, E.7
Ohsumi, Y.8
Yoshimori, T.9
-
13
-
-
84883414890
-
The LIR motif - crucial for selective autophagy
-
23908376
-
Birgisdottir AB, Lamark T, Johansen T. The LIR motif - crucial for selective autophagy. J Cell Sci 2013; 126:3237-47; PMID:23908376
-
(2013)
J Cell Sci
, vol.126
, pp. 3237-3247
-
-
Birgisdottir, A.B.1
Lamark, T.2
Johansen, T.3
-
14
-
-
47549092694
-
Atg8 controls phagophore expansion during autophagosome formation
-
18508918
-
Xie Z, Nair U, Klionsky DJ. Atg8 controls phagophore expansion during autophagosome formation. Mol Biol Cell 2008; 19:3290-8; PMID:18508918; http://dx.doi.org/10.1091/mbc.E07-12-1292
-
(2008)
Mol Biol Cell
, vol.19
, pp. 3290-3298
-
-
Xie, Z.1
Nair, U.2
Klionsky, D.J.3
-
15
-
-
77953122645
-
LC3 and GATE-16/GABARAP subfamilies are both essential yet act differently in autophagosome biogenesis
-
20418806
-
Weidberg H, Shvets E, Shpilka T, Shimron F, Shinder V, Elazar Z. LC3 and GATE-16/GABARAP subfamilies are both essential yet act differently in autophagosome biogenesis. EMBO J 2010; 29:1792-802; PMID:20418806; http://dx.doi.org/10.1038/emboj.2010.74
-
(2010)
EMBO J
, vol.29
, pp. 1792-1802
-
-
Weidberg, H.1
Shvets, E.2
Shpilka, T.3
Shimron, F.4
Shinder, V.5
Elazar, Z.6
-
16
-
-
84893500894
-
Molecular mechanism of autophagic membrane-scaffold assembly and disassembly
-
24485455
-
Kaufmann A, Beier V, Franquelim HG, Wollert T. Molecular mechanism of autophagic membrane-scaffold assembly and disassembly. Cell 2014; 156:469-81; PMID:24485455; http://dx.doi.org/10.1016/j.cell.2013.12.022
-
(2014)
Cell
, vol.156
, pp. 469-481
-
-
Kaufmann, A.1
Beier, V.2
Franquelim, H.G.3
Wollert, T.4
-
17
-
-
0034676037
-
The reversible modification regulates the membrane-binding state of Apg8/Aut7 essential for autophagy and the cytoplasm to vacuole targeting pathway
-
11038174
-
Kirisako T, Ichimura Y, Okada H, Kabeya Y, Mizushima N, Yoshimori T, Ohsumi M, Takao T, Noda T, Ohsumi Y. The reversible modification regulates the membrane-binding state of Apg8/Aut7 essential for autophagy and the cytoplasm to vacuole targeting pathway. J Cell Biol 2000; 151:263-76; PMID:11038174; http://dx.doi.org/10.1083/jcb.151.2.263
-
(2000)
J Cell Biol
, vol.151
, pp. 263-276
-
-
Kirisako, T.1
Ichimura, Y.2
Okada, H.3
Kabeya, Y.4
Mizushima, N.5
Yoshimori, T.6
Ohsumi, M.7
Takao, T.8
Noda, T.9
Ohsumi, Y.10
-
18
-
-
34548259958
-
p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy
-
17580304
-
Pankiv S, Clausen TH, Lamark T, Brech A, Bruun JA, Outzen H, Overvatn A, Bjorkoy G, Johansen T. p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy. J Biol Chem 2007; 282:24131-45; PMID:17580304; http://dx.doi.org/10.1074/jbc.M702824200
-
(2007)
J Biol Chem
, vol.282
, pp. 24131-24145
-
-
Pankiv, S.1
Clausen, T.H.2
Lamark, T.3
Brech, A.4
Bruun, J.A.5
Outzen, H.6
Overvatn, A.7
Bjorkoy, G.8
Johansen, T.9
-
19
-
-
84869222326
-
ATG8 family proteins act as scaffolds for assembly of the ULK complex: Sequence Requirements For LC3-Interacting Region (LIR) Motifs
-
23043107
-
Alemu EA, Lamark T, Torgersen KM, Birgisdottir AB, Larsen KB, Jain A, Olsvik H, Overvatn A, Kirkin V, Johansen T. ATG8 family proteins act as scaffolds for assembly of the ULK complex:Sequence Requirements For LC3-Interacting Region (LIR) Motifs. J Biol Chem 2012; 287:39275-90; PMID:23043107; http://dx.doi.org/10.1074/jbc.M112.378109
-
(2012)
J Biol Chem
, vol.287
, pp. 39275-39290
-
-
Alemu, E.A.1
Lamark, T.2
Torgersen, K.M.3
Birgisdottir, A.B.4
Larsen, K.B.5
Jain, A.6
Olsvik, H.7
Overvatn, A.8
Kirkin, V.9
Johansen, T.10
-
20
-
-
84957432947
-
Mitophagy programs: mechanisms and physiological implications of mitochondrial targeting by autophagy
-
26611876
-
Hamacher-Brady A, Brady NR. Mitophagy programs:mechanisms and physiological implications of mitochondrial targeting by autophagy. Cell Mol Life Sci 2016; 73:775-95; PMID:26611876; http://dx.doi.org/10.1007/s00018-015-2087-8
-
(2016)
Cell Mol Life Sci
, vol.73
, pp. 775-795
-
-
Hamacher-Brady, A.1
Brady, N.R.2
-
21
-
-
84891461247
-
The LC3 interactome at a glance
-
24345374
-
Wild P, McEwan DG, Dikic I. The LC3 interactome at a glance. J Cell Sci 2014; 127:3-9; PMID:24345374; http://dx.doi.org/10.1242/jcs.140426
-
(2014)
J Cell Sci
, vol.127
, pp. 3-9
-
-
Wild, P.1
McEwan, D.G.2
Dikic, I.3
-
22
-
-
53049103308
-
Structural basis for sorting mechanism of p62 in selective autophagy
-
18524774
-
Ichimura Y, Kumanomidou T, Sou YS, Mizushima T, Ezaki J, Ueno T, Kominami E, Yamane T, Tanaka K, Komatsu M. Structural basis for sorting mechanism of p62 in selective autophagy. J Biol Chem 2008; 283:22847-57; PMID:18524774; http://dx.doi.org/10.1074/jbc.M802182200
-
(2008)
J Biol Chem
, vol.283
, pp. 22847-22857
-
-
Ichimura, Y.1
Kumanomidou, T.2
Sou, Y.S.3
Mizushima, T.4
Ezaki, J.5
Ueno, T.6
Kominami, E.7
Yamane, T.8
Tanaka, K.9
Komatsu, M.10
-
23
-
-
57249083972
-
Structural basis of target recognition by Atg8/LC3 during selective autophagy
-
19021777
-
Noda NN, Kumeta H, Nakatogawa H, Satoo K, Adachi W, Ishii J, Fujioka Y, Ohsumi Y, Inagaki F. Structural basis of target recognition by Atg8/LC3 during selective autophagy. Genes Cells 2008; 13:1211-8; PMID:19021777; http://dx.doi.org/10.1111/j.1365-2443.2008.01238.x
-
(2008)
Genes Cells
, vol.13
, pp. 1211-1218
-
-
Noda, N.N.1
Kumeta, H.2
Nakatogawa, H.3
Satoo, K.4
Adachi, W.5
Ishii, J.6
Fujioka, Y.7
Ohsumi, Y.8
Inagaki, F.9
-
24
-
-
84920380278
-
The functional and pathologic relevance of autophagy proteases
-
25654548
-
Fernandez AF, Lopez-Otin C. The functional and pathologic relevance of autophagy proteases. J Clin Invest 2015; 125:33-41; PMID:25654548; http://dx.doi.org/10.1172/JCI73940
-
(2015)
J Clin Invest
, vol.125
, pp. 33-41
-
-
Fernandez, A.F.1
Lopez-Otin, C.2
-
25
-
-
0347695019
-
A single protease, Apg4B, is specific for the autophagy-related ubiquitin-like proteins GATE-16, MAP1-LC3, GABARAP, and Apg8L
-
14530254
-
Hemelaar J, Lelyveld VS, Kessler BM, Ploegh HL. A single protease, Apg4B, is specific for the autophagy-related ubiquitin-like proteins GATE-16, MAP1-LC3, GABARAP, and Apg8L. J Biol Chem 2003; 278:51841-50; PMID:14530254; http://dx.doi.org/10.1074/jbc.M308762200
-
(2003)
J Biol Chem
, vol.278
, pp. 51841-51850
-
-
Hemelaar, J.1
Lelyveld, V.S.2
Kessler, B.M.3
Ploegh, H.L.4
-
26
-
-
79953190772
-
Kinetics comparisons of mammalian Atg4 homologues indicate selective preferences toward diverse Atg8 substrates
-
21177865
-
Li M, Hou Y, Wang J, Chen X, Shao ZM, Yin XM. Kinetics comparisons of mammalian Atg4 homologues indicate selective preferences toward diverse Atg8 substrates. J Biol Chem 2011; 286:7327-38; PMID:21177865; http://dx.doi.org/10.1074/jbc.M110.199059
-
(2011)
J Biol Chem
, vol.286
, pp. 7327-7338
-
-
Li, M.1
Hou, Y.2
Wang, J.3
Chen, X.4
Shao, Z.M.5
Yin, X.M.6
-
27
-
-
9144224360
-
Human light chain 3/MAP1LC3B is cleaved at its carboxyl-terminal Met121 to expose Gly120 for lipidation and targeting to autophagosomal membranes
-
15355958
-
Tanida I, Ueno T, Kominami E. Human light chain 3/MAP1LC3B is cleaved at its carboxyl-terminal Met121 to expose Gly120 for lipidation and targeting to autophagosomal membranes. J Biol Chem 2004; 279:47704-10; PMID:15355958; http://dx.doi.org/10.1074/jbc.M407016200
-
(2004)
J Biol Chem
, vol.279
, pp. 47704-47710
-
-
Tanida, I.1
Ueno, T.2
Kominami, E.3
-
28
-
-
3242888703
-
LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation
-
15169837
-
Kabeya Y, Mizushima N, Yamamoto A, Oshitani-Okamoto S, Ohsumi Y, Yoshimori T. LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation. J Cell Sci 2004; 117:2805-12; PMID:15169837; http://dx.doi.org/10.1242/jcs.01131
-
(2004)
J Cell Sci
, vol.117
, pp. 2805-2812
-
-
Kabeya, Y.1
Mizushima, N.2
Yamamoto, A.3
Oshitani-Okamoto, S.4
Ohsumi, Y.5
Yoshimori, T.6
-
29
-
-
0037515749
-
The COOH terminus of GATE-16, an intra-Golgi transport modulator, is cleaved by the human cysteine protease HsApg4A
-
12473658
-
Scherz-Shouval R, Sagiv Y, Shorer H, Elazar Z. The COOH terminus of GATE-16, an intra-Golgi transport modulator, is cleaved by the human cysteine protease HsApg4A. J Biol Chem 2003; 278:14053-8; PMID:12473658; http://dx.doi.org/10.1074/jbc.M212108200
-
(2003)
J Biol Chem
, vol.278
, pp. 14053-14058
-
-
Scherz-Shouval, R.1
Sagiv, Y.2
Shorer, H.3
Elazar, Z.4
-
30
-
-
69649090647
-
Caspase cleavage of Atg4D stimulates GABARAP-L1 processing and triggers mitochondrial targeting and apoptosis
-
19549685
-
Betin VM, Lane JD. Caspase cleavage of Atg4D stimulates GABARAP-L1 processing and triggers mitochondrial targeting and apoptosis. J Cell Sci 2009; 122:2554-66; PMID:19549685; http://dx.doi.org/10.1242/jcs.046250
-
(2009)
J Cell Sci
, vol.122
, pp. 2554-2566
-
-
Betin, V.M.1
Lane, J.D.2
-
31
-
-
34547132328
-
Tissue-specific autophagy alterations and increased tumorigenesis in mice deficient in Atg4C/autophagin-3
-
17442669
-
Marino G, Salvador-Montoliu N, Fueyo A, Knecht E, Mizushima N, Lopez-Otin C. Tissue-specific autophagy alterations and increased tumorigenesis in mice deficient in Atg4C/autophagin-3. J Biol Chem 2007; 282:18573-83; PMID:17442669; http://dx.doi.org/10.1074/jbc.M701194200
-
(2007)
J Biol Chem
, vol.282
, pp. 18573-18583
-
-
Marino, G.1
Salvador-Montoliu, N.2
Fueyo, A.3
Knecht, E.4
Mizushima, N.5
Lopez-Otin, C.6
-
32
-
-
84862618804
-
A role for Atg8-PE deconjugation in autophagosome biogenesis
-
22622160
-
Nair U, Yen WL, Mari M, Cao Y, Xie Z, Baba M, Reggiori F, Klionsky DJ. A role for Atg8-PE deconjugation in autophagosome biogenesis. Autophagy 2012; 8:780-93; PMID:22622160; http://dx.doi.org/10.4161/auto.19385
-
(2012)
Autophagy
, vol.8
, pp. 780-793
-
-
Nair, U.1
Yen, W.L.2
Mari, M.3
Cao, Y.4
Xie, Z.5
Baba, M.6
Reggiori, F.7
Klionsky, D.J.8
-
33
-
-
84857256919
-
Atg4 recycles inappropriately lipidated Atg8 to promote autophagosome biogenesis
-
22240591
-
Nakatogawa H, Ishii J, Asai E, Ohsumi Y. Atg4 recycles inappropriately lipidated Atg8 to promote autophagosome biogenesis. Autophagy 2012; 8:177-86; PMID:22240591; http://dx.doi.org/10.4161/auto.8.2.18373
-
(2012)
Autophagy
, vol.8
, pp. 177-186
-
-
Nakatogawa, H.1
Ishii, J.2
Asai, E.3
Ohsumi, Y.4
-
34
-
-
84864886799
-
Dual roles of Atg8-PE deconjugation by Atg4 in autophagy
-
22652539
-
Yu ZQ, Ni T, Hong B, Wang HY, Jiang FJ, Zou S, Chen Y, Zheng XL, Klionsky DJ, Liang Y, et al. Dual roles of Atg8-PE deconjugation by Atg4 in autophagy. Autophagy 2012; 8:883-92; PMID:22652539; http://dx.doi.org/10.4161/auto.19652
-
(2012)
Autophagy
, vol.8
, pp. 883-892
-
-
Yu, Z.Q.1
Ni, T.2
Hong, B.3
Wang, H.Y.4
Jiang, F.J.5
Zou, S.6
Chen, Y.7
Zheng, X.L.8
Klionsky, D.J.9
Liang, Y.10
-
35
-
-
34247186472
-
Reactive oxygen species are essential for autophagy and specifically regulate the activity of Atg4
-
17347651
-
Scherz-Shouval R, Shvets E, Fass E, Shorer H, Gil L, Elazar Z. Reactive oxygen species are essential for autophagy and specifically regulate the activity of Atg4. Embo J 2007; 26:1749-60; PMID:17347651; http://dx.doi.org/10.1038/sj.emboj.7601623
-
(2007)
Embo J
, vol.26
, pp. 1749-1760
-
-
Scherz-Shouval, R.1
Shvets, E.2
Fass, E.3
Shorer, H.4
Gil, L.5
Elazar, Z.6
-
36
-
-
58149290220
-
An Atg4B mutant hampers the lipidation of LC3 paralogues and causes defects in autophagosome closure
-
18768752
-
Fujita N, Hayashi-Nishino M, Fukumoto H, Omori H, Yamamoto A, Noda T, Yoshimori T. An Atg4B mutant hampers the lipidation of LC3 paralogues and causes defects in autophagosome closure. Mol Biol Cell 2008; 19:4651-9; PMID:18768752; http://dx.doi.org/10.1091/mbc.E08-03-0312
-
(2008)
Mol Biol Cell
, vol.19
, pp. 4651-4659
-
-
Fujita, N.1
Hayashi-Nishino, M.2
Fukumoto, H.3
Omori, H.4
Yamamoto, A.5
Noda, T.6
Yoshimori, T.7
-
37
-
-
65649136884
-
The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy
-
19322194
-
Satoo K, Noda NN, Kumeta H, Fujioka Y, Mizushima N, Ohsumi Y, Inagaki F. The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy. EMBO J 2009; 28:1341-50; PMID:19322194; http://dx.doi.org/10.1038/emboj.2009.80
-
(2009)
EMBO J
, vol.28
, pp. 1341-1350
-
-
Satoo, K.1
Noda, N.N.2
Kumeta, H.3
Fujioka, Y.4
Mizushima, N.5
Ohsumi, Y.6
Inagaki, F.7
-
38
-
-
84899750506
-
iLIR: A web resource for prediction of Atg8-family interacting proteins
-
24589857
-
Kalvari I, Tsompanis S, Mulakkal NC, Osgood R, Johansen T, Nezis IP, Promponas VJ. iLIR:A web resource for prediction of Atg8-family interacting proteins. Autophagy 2014; 10:913-25; PMID:24589857; http://dx.doi.org/10.4161/auto.28260
-
(2014)
Autophagy
, vol.10
, pp. 913-925
-
-
Kalvari, I.1
Tsompanis, S.2
Mulakkal, N.C.3
Osgood, R.4
Johansen, T.5
Nezis, I.P.6
Promponas, V.J.7
-
39
-
-
76849087968
-
PONDR-FIT: a meta-predictor of intrinsically disordered amino acids
-
20100603
-
Xue B, Dunbrack RL, Williams RW, Dunker AK, Uversky VN. PONDR-FIT:a meta-predictor of intrinsically disordered amino acids. Biochim Biophys Acta 2010; 1804:996-1010; PMID:20100603; http://dx.doi.org/10.1016/j.bbapap.2010.01.011
-
(2010)
Biochim Biophys Acta
, vol.1804
, pp. 996-1010
-
-
Xue, B.1
Dunbrack, R.L.2
Williams, R.W.3
Dunker, A.K.4
Uversky, V.N.5
-
40
-
-
79959498837
-
Characterization of the interaction of GABARAPL-1 with the LIR motif of NBR1
-
21620860
-
Rozenknop A, Rogov VV, Rogova NY, Lohr F, Guntert P, Dikic I, Dotsch V. Characterization of the interaction of GABARAPL-1 with the LIR motif of NBR1. J Mol Biol 2011; 410:477-87; PMID:21620860; http://dx.doi.org/10.1016/j.jmb.2011.05.003
-
(2011)
J Mol Biol
, vol.410
, pp. 477-487
-
-
Rozenknop, A.1
Rogov, V.V.2
Rogova, N.Y.3
Lohr, F.4
Guntert, P.5
Dikic, I.6
Dotsch, V.7
-
41
-
-
84946100784
-
ATG4B (Autophagin-1) phosphorylation modulates autophagy
-
26378241
-
Yang Z, Wilkie-Grantham RP, Yanagi T, Shu CW, Matsuzawa S, Reed JC. ATG4B (Autophagin-1) phosphorylation modulates autophagy. J Biol Chem 2015; 290:26549-61; PMID:26378241; http://dx.doi.org/10.1074/jbc.M115.658088
-
(2015)
J Biol Chem
, vol.290
, pp. 26549-26561
-
-
Yang, Z.1
Wilkie-Grantham, R.P.2
Yanagi, T.3
Shu, C.W.4
Matsuzawa, S.5
Reed, J.C.6
-
42
-
-
84883369848
-
Structural basis for phosphorylation-triggered autophagic clearance of Salmonella
-
23805866
-
Rogov VV, Suzuki H, Fiskin E, Wild P, Kniss A, Rozenknop A, Kato R, Kawasaki M, McEwan DG, Lohr F, et al. Structural basis for phosphorylation-triggered autophagic clearance of Salmonella. Biochem J 2013; 454:459-66; PMID:23805866; http://dx.doi.org/10.1042/BJ20121907
-
(2013)
Biochem J
, vol.454
, pp. 459-466
-
-
Rogov, V.V.1
Suzuki, H.2
Fiskin, E.3
Wild, P.4
Kniss, A.5
Rozenknop, A.6
Kato, R.7
Kawasaki, M.8
McEwan, D.G.9
Lohr, F.10
-
43
-
-
77954988580
-
Autophagy is essential for mouse sense of balance
-
20577052
-
Marino G, Fernandez AF, Cabrera S, Lundberg YW, Cabanillas R, Rodriguez F, Salvador-Montoliu N, Vega JA, Germana A, Fueyo A, et al. Autophagy is essential for mouse sense of balance. J Clin Invest 2010; 120:2331-44; PMID:20577052; http://dx.doi.org/10.1172/JCI42601
-
(2010)
J Clin Invest
, vol.120
, pp. 2331-2344
-
-
Marino, G.1
Fernandez, A.F.2
Cabrera, S.3
Lundberg, Y.W.4
Cabanillas, R.5
Rodriguez, F.6
Salvador-Montoliu, N.7
Vega, J.A.8
Germana, A.9
Fueyo, A.10
-
44
-
-
47149091700
-
A pathway sensor for genome-wide screens of intracellular proteolytic cleavage
-
18387192
-
Ketteler R, Sun Z, Kovacs KF, He WW, Seed B. A pathway sensor for genome-wide screens of intracellular proteolytic cleavage. Genome Biol 2008; 9:R64; PMID:18387192; http://dx.doi.org/10.1186/gb-2008-9-4-r64
-
(2008)
Genome Biol
, vol.9
, pp. R64
-
-
Ketteler, R.1
Sun, Z.2
Kovacs, K.F.3
He, W.W.4
Seed, B.5
-
45
-
-
84953373631
-
Activation of ULK kinase and autophagy by GABARAP trafficking from the centrosome is regulated by WAC and GM130
-
26687599
-
Joachim J, Jefferies HB, Razi M, Frith D, Snijders AP, Chakravarty P, Judith D, Tooze SA. Activation of ULK kinase and autophagy by GABARAP trafficking from the centrosome is regulated by WAC and GM130. Mol Cell 2015; 60:899-913; PMID:26687599; http://dx.doi.org/10.1016/j.molcel.2015.11.018
-
(2015)
Mol Cell
, vol.60
, pp. 899-913
-
-
Joachim, J.1
Jefferies, H.B.2
Razi, M.3
Frith, D.4
Snijders, A.P.5
Chakravarty, P.6
Judith, D.7
Tooze, S.A.8
-
46
-
-
84928709529
-
The Xenopus laevis Atg4B Protease: Insights into substrate recognition and application for tag removal from proteins expressed in Pro- and Eukaryotic hosts
-
25923686
-
Frey S, Gorlich D. The Xenopus laevis Atg4B Protease:Insights into substrate recognition and application for tag removal from proteins expressed in Pro- and Eukaryotic hosts. PloS One 2015; 10:e0125099; PMID:25923686; http://dx.doi.org/10.1371/journal.pone.0125099
-
(2015)
PloS One
, vol.10
, pp. e0125099
-
-
Frey, S.1
Gorlich, D.2
-
47
-
-
84892438559
-
The C. elegans LC3 acts downstream of GABARAP to degrade autophagosomes by interacting with the HOPS subunit VPS39
-
24374177
-
Manil-Segalen M, Lefebvre C, Jenzer C, Trichet M, Boulogne C, Satiat-Jeunemaitre B, Legouis R. The C. elegans LC3 acts downstream of GABARAP to degrade autophagosomes by interacting with the HOPS subunit VPS39. Dev Cell 2014; 28:43-55; PMID:24374177; http://dx.doi.org/10.1016/j.devcel.2013.11.022
-
(2014)
Dev Cell
, vol.28
, pp. 43-55
-
-
Manil-Segalen, M.1
Lefebvre, C.2
Jenzer, C.3
Trichet, M.4
Boulogne, C.5
Satiat-Jeunemaitre, B.6
Legouis, R.7
-
48
-
-
84953383938
-
Structural Basis of the Differential Function of the Two C. elegans Atg8 Homologs, LGG-1 and LGG-2, in Autophagy
-
26687600
-
Wu F, Watanabe Y, Guo XY, Qi X, Wang P, Zhao HY, Wang Z, Fujioka Y, Zhang H, Ren JQ, et al. Structural Basis of the Differential Function of the Two C. elegans Atg8 Homologs, LGG-1 and LGG-2, in Autophagy. Mol Cell 2015; 60:914-29; PMID:26687600; http://dx.doi.org/10.1016/j.molcel.2015.11.019
-
(2015)
Mol Cell
, vol.60
, pp. 914-929
-
-
Wu, F.1
Watanabe, Y.2
Guo, X.Y.3
Qi, X.4
Wang, P.5
Zhao, H.Y.6
Wang, Z.7
Fujioka, Y.8
Zhang, H.9
Ren, J.Q.10
-
49
-
-
84859901966
-
Genome-wide siRNA screen reveals amino acid starvation-induced autophagy requires SCOC and WAC
-
22354037
-
McKnight NC, Jefferies HB, Alemu EA, Saunders RE, Howell M, Johansen T, Tooze SA. Genome-wide siRNA screen reveals amino acid starvation-induced autophagy requires SCOC and WAC. EMBO J 2012; 31:1931-46; PMID:22354037; http://dx.doi.org/10.1038/emboj.2012.36
-
(2012)
EMBO J
, vol.31
, pp. 1931-1946
-
-
McKnight, N.C.1
Jefferies, H.B.2
Alemu, E.A.3
Saunders, R.E.4
Howell, M.5
Johansen, T.6
Tooze, S.A.7
-
50
-
-
0029911368
-
p38 mitogen-activated protein kinase phosphorylates cytosolic phospholipase A2 (cPLA2) in thrombin-stimulated platelets. Evidence that proline-directed phosphorylation is not required for mobilization of arachidonic acid by cPLA2
-
8910365
-
Kramer RM, Roberts EF, Um SL, Borsch-Haubold AG, Watson SP, Fisher MJ, Jakubowski JA. p38 mitogen-activated protein kinase phosphorylates cytosolic phospholipase A2 (cPLA2) in thrombin-stimulated platelets. Evidence that proline-directed phosphorylation is not required for mobilization of arachidonic acid by cPLA2. J Biol Chem 1996; 271:27723-9; PMID:8910365; http://dx.doi.org/10.1074/jbc.271.44.27723
-
(1996)
J Biol Chem
, vol.271
, pp. 27723-27729
-
-
Kramer, R.M.1
Roberts, E.F.2
Um, S.L.3
Borsch-Haubold, A.G.4
Watson, S.P.5
Fisher, M.J.6
Jakubowski, J.A.7
-
52
-
-
34447508216
-
Phaser crystallographic software
-
19461840
-
McCoy AJ, Grosse-Kunstleve RW, Adams PD, Winn MD, Storoni LC, Read RJ. Phaser crystallographic software. J Appl Crystallogr 2007; 40:658-74; PMID:19461840; http://dx.doi.org/10.1107/S0021889807021206
-
(2007)
J Appl Crystallogr
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
Read, R.J.6
-
53
-
-
76449098262
-
PHENIX: a comprehensive Python-based system for macromolecular structure solution
-
20124702
-
Adams PD, Afonine PV, Bunkoczi G, Chen VB, Davis IW, Echols N, Headd JJ, Hung LW, Kapral GJ, Grosse-Kunstleve RW, et al. PHENIX:a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr D Biol Crystallogr 2010; 66:213-21; PMID:20124702; http://dx.doi.org/10.1107/S0907444909052925
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
Afonine, P.V.2
Bunkoczi, G.3
Chen, V.B.4
Davis, I.W.5
Echols, N.6
Headd, J.J.7
Hung, L.W.8
Kapral, G.J.9
Grosse-Kunstleve, R.W.10
-
55
-
-
0032922193
-
SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model
-
10089410
-
Vaguine AA, Richelle J, Wodak SJ. SFCHECK:a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model. Acta Crystallogr D Biol Crystallogr 1999; 55:191-205; PMID:10089410; http://dx.doi.org/10.1107/S0907444998006684
-
(1999)
Acta Crystallogr D Biol Crystallogr
, vol.55
, pp. 191-205
-
-
Vaguine, A.A.1
Richelle, J.2
Wodak, S.J.3
-
56
-
-
84904790793
-
Deciphering key features in protein structures with the new ENDscript server
-
24753421
-
Robert X, Gouet P. Deciphering key features in protein structures with the new ENDscript server. Nucleic Acids Res 2014; 42:W320-4; PMID:24753421; http://dx.doi.org/10.1093/nar/gku316
-
(2014)
Nucleic Acids Res
, vol.42
, pp. W320-W324
-
-
Robert, X.1
Gouet, P.2
|