메뉴 건너뛰기




Volumn 13, Issue 2, 2017, Pages

RNA-seq analysis of Drosophila clock and non-clock neurons reveals neuron-specific cycling and novel candidate neuropeptides

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; NEUROPEPTIDE; RNA; TRANSCRIPTOME; DROSOPHILA PROTEIN; NEUROPEPTIDE F, DROSOPHILA; TIMELESS PROTEIN, DROSOPHILA; TRANSCRIPTION FACTOR; VRILLE PROTEIN, DROSOPHILA;

EID: 85014091655     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1006613     Document Type: Article
Times cited : (97)

References (80)
  • 1
    • 84884355792 scopus 로고    scopus 로고
    • Circadian timekeeping and output mechanisms in animals
    • 3731779, PubMed Central PMCID: PMCPMC3973145
    • Hardin PE, Panda S, Circadian timekeeping and output mechanisms in animals. Curr Opin Neurobiol. 2013;23(5):724–31. PubMed Central PMCID: PMCPMC3973145. doi: 10.1016/j.conb.2013.02.01823731779
    • (2013) Curr Opin Neurobiol , vol.23 , Issue.5 , pp. 724-731
    • Hardin, P.E.1    Panda, S.2
  • 2
    • 80052463880 scopus 로고    scopus 로고
    • Circadian plasticity: from structure to behavior
    • 1906538,.;: –
    • Frenkel L, Ceriani MF, Circadian plasticity: from structure to behavior. Int Rev Neurobiol. 2011;99:107–38. doi: 10.1016/B978-0-12-387003-2.00005-721906538
    • (2011) Int Rev Neurobiol , vol.99 , pp. 107-138
    • Frenkel, L.1    Ceriani, M.F.2
  • 3
    • 84864796611 scopus 로고    scopus 로고
    • Two clocks in the brain: an update of the morning and evening oscillator model in Drosophila
    • 2877659,.;: –
    • Yoshii T, Rieger D, Helfrich-Forster C, Two clocks in the brain: an update of the morning and evening oscillator model in Drosophila. Prog Brain Res. 2012;199:59–82. doi: 10.1016/B978-0-444-59427-3.00027-722877659
    • (2012) Prog Brain Res , vol.199 , pp. 59-82
    • Yoshii, T.1    Rieger, D.2    Helfrich-Forster, C.3
  • 4
    • 84901853635 scopus 로고    scopus 로고
    • Studying circadian rhythms in Drosophila melanogaster
    • 4412370, Epub 2014/01/15. PubMed Central PMCID: PMC4049855
    • Tataroglu O, Emery P, Studying circadian rhythms in Drosophila melanogaster. Methods. 2014;68(1):140–50. Epub 2014/01/15. PubMed Central PMCID: PMC4049855. doi: 10.1016/j.ymeth.2014.01.00124412370
    • (2014) Methods , vol.68 , Issue.1 , pp. 140-150
    • Tataroglu, O.1    Emery, P.2
  • 5
    • 0033599009 scopus 로고    scopus 로고
    • A pdf neuropeptide gene mutation and ablation of PDF neurons each cause severe abnormalities of behavioral circadian rhythms in Drosophila
    • 0619432, Epub 2000/01/05
    • Renn SC, Park JH, Rosbash M, Hall JC, Taghert PH, A pdf neuropeptide gene mutation and ablation of PDF neurons each cause severe abnormalities of behavioral circadian rhythms in Drosophila. Cell. 1999;99(7):791–802. Epub 2000/01/05. 10619432
    • (1999) Cell , vol.99 , Issue.7 , pp. 791-802
    • Renn, S.C.1    Park, J.H.2    Rosbash, M.3    Hall, J.C.4    Taghert, P.H.5
  • 6
    • 0035098980 scopus 로고    scopus 로고
    • Defining the role of Drosophila lateral neurons in the control of circadian rhythms in motor activity and eclosion by targeted genetic ablation and PERIOD protein overexpression
    • 126466
    • Blanchardon E, Grima B, Klarsfeld A, Chelot E, Hardin PE, Preat T, et al. Defining the role of Drosophila lateral neurons in the control of circadian rhythms in motor activity and eclosion by targeted genetic ablation and PERIOD protein overexpression. Eur J Neurosci. 2001;13(5):871–88. 11264660
    • (2001) Eur J Neurosci , vol.13 , Issue.5 , pp. 871-888
    • Blanchardon, E.1    Grima, B.2    Klarsfeld, A.3    Chelot, E.4    Hardin, P.E.5    Preat, T.6
  • 7
    • 33846011859 scopus 로고    scopus 로고
    • SCN organization reconsidered
    • 722992
    • Morin LP, SCN organization reconsidered. J Biol Rhythms. 2007;22(1):3–13. doi: 10.1177/074873040629674917229920
    • (2007) J Biol Rhythms , vol.22 , Issue.1 , pp. 3-13
    • Morin, L.P.1
  • 8
    • 79959875504 scopus 로고    scopus 로고
    • Cell autonomy and synchrony of suprachiasmatic nucleus circadian oscillators
    • 1665298, PubMed Central PMCID: PMCPMC3775330
    • Mohawk JA, Takahashi JS, Cell autonomy and synchrony of suprachiasmatic nucleus circadian oscillators. Trends Neurosci. 2011;34(7):349–58. PubMed Central PMCID: PMCPMC3775330. doi: 10.1016/j.tins.2011.05.00321665298
    • (2011) Trends Neurosci , vol.34 , Issue.7 , pp. 349-358
    • Mohawk, J.A.1    Takahashi, J.S.2
  • 9
    • 76649132991 scopus 로고    scopus 로고
    • Endogenous peptide discovery of the rat circadian clock: a focused study of the suprachiasmatic nucleus by ultrahigh performance tandem mass spectrometry
    • 9955084, PubMed Central PMCID: PMCPMC2830840
    • Lee JE, Atkins N, Jr.Hatcher NG, Zamdborg L, Gillette MU, Sweedler JV, et al. Endogenous peptide discovery of the rat circadian clock: a focused study of the suprachiasmatic nucleus by ultrahigh performance tandem mass spectrometry. Mol Cell Proteomics. 2010;9(2):285–97. PubMed Central PMCID: PMCPMC2830840. doi: 10.1074/mcp.M900362-MCP20019955084
    • (2010) Mol Cell Proteomics , vol.9 , Issue.2 , pp. 285-297
    • Lee, J.E.1    Atkins, N.2    Hatcher, N.G.3    Zamdborg, L.4    Gillette, M.U.5    Sweedler, J.V.6
  • 10
    • 0036337037 scopus 로고    scopus 로고
    • Larval optic nerve and adult extra-retinal photoreceptors sequentially associate with clock neurons during Drosophila brain development
    • 1880353, Epub 2002/03/07
    • Malpel S, Klarsfeld A, Rouyer F, Larval optic nerve and adult extra-retinal photoreceptors sequentially associate with clock neurons during Drosophila brain development. Development. 2002;129(6):1443–53. Epub 2002/03/07. 11880353
    • (2002) Development , vol.129 , Issue.6 , pp. 1443-1453
    • Malpel, S.1    Klarsfeld, A.2    Rouyer, F.3
  • 11
    • 43749091967 scopus 로고    scopus 로고
    • Cryptochrome is present in the compound eyes and a subset of Drosophila's clock neurons
    • 8399544, Epub 2008/04/11
    • Yoshii T, Todo T, Wulbeck C, Stanewsky R, Helfrich-Forster C, Cryptochrome is present in the compound eyes and a subset of Drosophila's clock neurons. J Comp Neurol. 2008;508(6):952–66. Epub 2008/04/11. doi: 10.1002/cne.2170218399544
    • (2008) J Comp Neurol , vol.508 , Issue.6 , pp. 952-966
    • Yoshii, T.1    Todo, T.2    Wulbeck, C.3    Stanewsky, R.4    Helfrich-Forster, C.5
  • 12
    • 84949944980 scopus 로고    scopus 로고
    • Acetylcholine from Visual Circuits Modulates the Activity of Arousal Neurons in Drosophila
    • 667485
    • Muraro NI, Ceriani MF, Acetylcholine from Visual Circuits Modulates the Activity of Arousal Neurons in Drosophila. J Neurosci. 2015;35(50):16315–27. doi: 10.1523/JNEUROSCI.1571-15.201526674859
    • (2015) J Neurosci , vol.35 , Issue.50 , pp. 16315-16327
    • Muraro, N.I.1    Ceriani, M.F.2
  • 13
    • 84984972601 scopus 로고    scopus 로고
    • A Neural Network Underlying Circadian Entrainment and Photoperiodic Adjustment of Sleep and Activity in Drosophila
    • 7581451, PubMed Central PMCID: PMCPMC5005721
    • Schlichting M, Menegazzi P, Lelito KR, Yao Z, Buhl E, Dalla Benetta E, et al. A Neural Network Underlying Circadian Entrainment and Photoperiodic Adjustment of Sleep and Activity in Drosophila. J Neurosci. 2016;36(35):9084–96. PubMed Central PMCID: PMCPMC5005721. doi: 10.1523/JNEUROSCI.0992-16.201627581451
    • (2016) J Neurosci , vol.36 , Issue.35 , pp. 9084-9096
    • Schlichting, M.1    Menegazzi, P.2    Lelito, K.R.3    Yao, Z.4    Buhl, E.5    Dalla Benetta, E.6
  • 14
    • 74949097778 scopus 로고    scopus 로고
    • PDF-modulated visual inputs and cryptochrome define diurnal behavior in Drosophila
    • 982070
    • Cusumano P, Klarsfeld A, Chelot E, Picot M, Richier B, Rouyer F, PDF-modulated visual inputs and cryptochrome define diurnal behavior in Drosophila. Nat Neurosci. 2009;12(11):1431–7. doi: 10.1038/nn.242919820704
    • (2009) Nat Neurosci , vol.12 , Issue.11 , pp. 1431-1437
    • Cusumano, P.1    Klarsfeld, A.2    Chelot, E.3    Picot, M.4    Richier, B.5    Rouyer, F.6
  • 15
    • 84896996418 scopus 로고    scopus 로고
    • The Drosophila circadian clock is a variably coupled network of multiple peptidergic units
    • 4675961, Epub 2014/03/29
    • Yao Z, Shafer OT, The Drosophila circadian clock is a variably coupled network of multiple peptidergic units. Science. 2014;343(6178):1516–20. Epub 2014/03/29. doi: 10.1126/science.125128524675961
    • (2014) Science , vol.343 , Issue.6178 , pp. 1516-1520
    • Yao, Z.1    Shafer, O.T.2
  • 16
    • 84959200804 scopus 로고    scopus 로고
    • Circadian rhythms in neuronal activity propagate through output circuits
    • 692806
    • Cavey M, Collins B, Bertet C, Blau J, Circadian rhythms in neuronal activity propagate through output circuits. Nat Neurosci. 2016;19(4):587–95. doi: 10.1038/nn.426326928065
    • (2016) Nat Neurosci , vol.19 , Issue.4 , pp. 587-595
    • Cavey, M.1    Collins, B.2    Bertet, C.3    Blau, J.4
  • 17
    • 7244252844 scopus 로고    scopus 로고
    • Morning and evening peaks of activity rely on different clock neurons of the Drosophila brain
    • 548361
    • Grima B, Chelot E, Xia R, Rouyer F, Morning and evening peaks of activity rely on different clock neurons of the Drosophila brain. Nature. 2004;431(7010):869–73. doi: 10.1038/nature0293515483616
    • (2004) Nature , vol.431 , Issue.7010 , pp. 869-873
    • Grima, B.1    Chelot, E.2    Xia, R.3    Rouyer, F.4
  • 18
    • 7244242193 scopus 로고    scopus 로고
    • Coupled oscillators control morning and evening locomotor behaviour of Drosophila
    • 548361
    • Stoleru D, Peng Y, Agosto J, Rosbash M, Coupled oscillators control morning and evening locomotor behaviour of Drosophila. Nature. 2004;431(7010):862–8. doi: 10.1038/nature0292615483615
    • (2004) Nature , vol.431 , Issue.7010 , pp. 862-868
    • Stoleru, D.1    Peng, Y.2    Agosto, J.3    Rosbash, M.4
  • 19
    • 84904412388 scopus 로고    scopus 로고
    • PDF neuron firing phase-shifts key circadian activity neurons in Drosophila
    • Epub 2014/06/19. PubMed Central PMCID: PMC4092873
    • Guo F, Cerullo I, Chen X, Rosbash M, PDF neuron firing phase-shifts key circadian activity neurons in Drosophila. Elife. 2014;3. Epub 2014/06/19. PubMed Central PMCID: PMC4092873.
    • (2014) Elife , vol.3
    • Guo, F.1    Cerullo, I.2    Chen, X.3    Rosbash, M.4
  • 20
    • 67651171469 scopus 로고    scopus 로고
    • Period gene expression in four neurons is sufficient for rhythmic activity of Drosophila melanogaster under dim light conditions
    • 962572
    • Rieger D, Wulbeck C, Rouyer F, Helfrich-Forster C, Period gene expression in four neurons is sufficient for rhythmic activity of Drosophila melanogaster under dim light conditions. J Biol Rhythms. 2009;24(4):271–82. doi: 10.1177/074873040933850819625729
    • (2009) J Biol Rhythms , vol.24 , Issue.4 , pp. 271-282
    • Rieger, D.1    Wulbeck, C.2    Rouyer, F.3    Helfrich-Forster, C.4
  • 21
    • 84923307925 scopus 로고    scopus 로고
    • Patch-clamp electrophysiology in Drosophila circadian pacemaker neurons
    • 5707271,.;: –. Epub 2015/02/25
    • Flourakis M, Allada R, Patch-clamp electrophysiology in Drosophila circadian pacemaker neurons. Methods Enzymol. 2015;552:23–44. Epub 2015/02/25. doi: 10.1016/bs.mie.2014.10.00525707271
    • (2015) Methods Enzymol , vol.552 , pp. 23-44
    • Flourakis, M.1    Allada, R.2
  • 22
    • 77950495934 scopus 로고    scopus 로고
    • DN1(p) circadian neurons coordinate acute light and PDF inputs to produce robust daily behavior in Drosophila
    • 0362452, Epub 2010/04/07. PubMed Central PMCID: PMC2864127
    • Zhang L, Chung BY, Lear BC, Kilman VL, Liu Y, Mahesh G, et al. DN1(p) circadian neurons coordinate acute light and PDF inputs to produce robust daily behavior in Drosophila. Curr Biol. 2010;20(7):591–9. Epub 2010/04/07. PubMed Central PMCID: PMC2864127. doi: 10.1016/j.cub.2010.02.05620362452
    • (2010) Curr Biol , vol.20 , Issue.7 , pp. 591-599
    • Zhang, L.1    Chung, B.Y.2    Lear, B.C.3    Kilman, V.L.4    Liu, Y.5    Mahesh, G.6
  • 23
    • 84899015909 scopus 로고    scopus 로고
    • Dual PDF signaling pathways reset clocks via TIMELESS and acutely excite target neurons to control circadian behavior
    • 4643294,.; ():. Epub 2014/03/20. PubMed Central PMCID: PMC3958333
    • Seluzicki A, Flourakis M, Kula-Eversole E, Zhang L, Kilman V, Allada R, Dual PDF signaling pathways reset clocks via TIMELESS and acutely excite target neurons to control circadian behavior. PLoS Biol. 2014;12(3):e1001810. Epub 2014/03/20. PubMed Central PMCID: PMC3958333. doi: 10.1371/journal.pbio.100181024643294
    • (2014) PLoS Biol , vol.12 , Issue.3 , pp. e1001810
    • Seluzicki, A.1    Flourakis, M.2    Kula-Eversole, E.3    Zhang, L.4    Kilman, V.5    Allada, R.6
  • 24
    • 84899510762 scopus 로고    scopus 로고
    • Identification of a circadian output circuit for rest:activity rhythms in Drosophila
    • 4766812, PubMed Central PMCID: PMC4003459
    • Cavanaugh DJ, Geratowski JD, Wooltorton JR, Spaethling JM, Hector CE, Zheng X, et al. Identification of a circadian output circuit for rest:activity rhythms in Drosophila. Cell. 2014;157(3):689–701. PubMed Central PMCID: PMC4003459. doi: 10.1016/j.cell.2014.02.02424766812
    • (2014) Cell , vol.157 , Issue.3 , pp. 689-701
    • Cavanaugh, D.J.1    Geratowski, J.D.2    Wooltorton, J.R.3    Spaethling, J.M.4    Hector, C.E.5    Zheng, X.6
  • 25
    • 84923263404 scopus 로고    scopus 로고
    • Calcitonin gene-related peptide neurons mediate sleep-specific circadian output in Drosophila
    • 5455031, Epub 2014/12/03. PubMed Central PMCID: PMC4255360
    • Kunst M, Hughes ME, Raccuglia D, Felix M, Li M, Barnett G, et al. Calcitonin gene-related peptide neurons mediate sleep-specific circadian output in Drosophila. Curr Biol. 2014;24(22):2652–64. Epub 2014/12/03. PubMed Central PMCID: PMC4255360. doi: 10.1016/j.cub.2014.09.07725455031
    • (2014) Curr Biol , vol.24 , Issue.22 , pp. 2652-2664
    • Kunst, M.1    Hughes, M.E.2    Raccuglia, D.3    Felix, M.4    Li, M.5    Barnett, G.6
  • 26
    • 84861437499 scopus 로고    scopus 로고
    • Balance of activity between LN(v)s and glutamatergic dorsal clock neurons promotes robust circadian rhythms in Drosophila
    • 2632728, Epub 2012/05/29. PubMed Central PMCID: PMC3361687
    • Collins B, Kane EA, Reeves DC, Akabas MH, Blau J, Balance of activity between LN(v)s and glutamatergic dorsal clock neurons promotes robust circadian rhythms in Drosophila. Neuron. 2012;74(4):706–18. Epub 2012/05/29. PubMed Central PMCID: PMC3361687. doi: 10.1016/j.neuron.2012.02.03422632728
    • (2012) Neuron , vol.74 , Issue.4 , pp. 706-718
    • Collins, B.1    Kane, E.A.2    Reeves, D.C.3    Akabas, M.H.4    Blau, J.5
  • 27
    • 77950484547 scopus 로고    scopus 로고
    • Light and temperature control the contribution of specific DN1 neurons to Drosophila circadian behavior
    • 0362449, Epub 2010/04/07. PubMed Central PMCID: PMC2862552
    • Zhang Y, Liu Y, Bilodeau-Wentworth D, Hardin PE, Emery P, Light and temperature control the contribution of specific DN1 neurons to Drosophila circadian behavior. Curr Biol. 2010;20(7):600–5. Epub 2010/04/07. PubMed Central PMCID: PMC2862552. doi: 10.1016/j.cub.2010.02.04420362449
    • (2010) Curr Biol , vol.20 , Issue.7 , pp. 600-605
    • Zhang, Y.1    Liu, Y.2    Bilodeau-Wentworth, D.3    Hardin, P.E.4    Emery, P.5
  • 28
    • 84983418807 scopus 로고    scopus 로고
    • Circadian neuron feedback controls the Drosophila sleep—activity profile
    • 747932
    • Guo F, Yu J, Jung HJ, Abruzzi KC, Luo W, Griffith LC, et al. Circadian neuron feedback controls the Drosophila sleep—activity profile. Nature. 2016;536(7616):292–7. doi: 10.1038/nature1909727479324
    • (2016) Nature , vol.536 , Issue.7616 , pp. 292-297
    • Guo, F.1    Yu, J.2    Jung, H.J.3    Abruzzi, K.C.4    Luo, W.5    Griffith, L.C.6
  • 29
    • 56349145622 scopus 로고    scopus 로고
    • PDF cells are a GABA-responsive wake-promoting component of the Drosophila sleep circuit
    • 9038223, Epub 2008/11/29. PubMed Central PMCID: PMC2734413
    • Parisky KM, Agosto J, Pulver SR, Shang Y, Kuklin E, Hodge JJ, et al. PDF cells are a GABA-responsive wake-promoting component of the Drosophila sleep circuit. Neuron. 2008;60(4):672–82. Epub 2008/11/29. PubMed Central PMCID: PMC2734413. doi: 10.1016/j.neuron.2008.10.04219038223
    • (2008) Neuron , vol.60 , Issue.4 , pp. 672-682
    • Parisky, K.M.1    Agosto, J.2    Pulver, S.R.3    Shang, Y.4    Kuklin, E.5    Hodge, J.J.6
  • 30
    • 84964264781 scopus 로고    scopus 로고
    • RNA-seq Profiling of Small Numbers of Drosophila Neurons
    • 5662465,.;: –. Epub 2015/02/11
    • Abruzzi K, Chen X, Nagoshi E, Zadina A, Rosbash M, RNA-seq Profiling of Small Numbers of Drosophila Neurons. Methods Enzymol. 2015;551:369–86. Epub 2015/02/11. doi: 10.1016/bs.mie.2014.10.02525662465
    • (2015) Methods Enzymol , vol.551 , pp. 369-386
    • Abruzzi, K.1    Chen, X.2    Nagoshi, E.3    Zadina, A.4    Rosbash, M.5
  • 31
    • 1842376242 scopus 로고    scopus 로고
    • Development of pigment-dispersing hormone-immunoreactive neurons in the nervous system of Drosophila melanogaster
    • Helfrich-Forster C, Development of pigment-dispersing hormone-immunoreactive neurons in the nervous system of Drosophila melanogaster. JCompNeurol. 1997;380:335–54.
    • (1997) JCompNeurol , vol.380 , pp. 335-354
    • Helfrich-Forster, C.1
  • 32
    • 67651185179 scopus 로고    scopus 로고
    • Peptidergic clock neurons in Drosophila: ion transport peptide and short neuropeptide F in subsets of dorsal and ventral lateral neurons
    • 9565664,.;: –
    • Johard HA, Yoishii T, Dircksen H, Cusumano P, Rouyer F, Peptidergic clock neurons in Drosophila: ion transport peptide and short neuropeptide F in subsets of dorsal and ventral lateral neurons. J Comp Neurol. 2009;516:59–73. doi: 10.1002/cne.2209919565664
    • (2009) J Comp Neurol , vol.516 , pp. 59-73
    • Johard, H.A.1    Yoishii, T.2    Dircksen, H.3    Cusumano, P.4    Rouyer, F.5
  • 33
    • 0023608450 scopus 로고
    • Genetic dissection of dopamine and serotonin synthesis in the nervous system of Drosophila melanogaster
    • 12628
    • Budnik V, White K, Genetic dissection of dopamine and serotonin synthesis in the nervous system of Drosophila melanogaster. J Neurogenet. 1987;4(6):309–14. 3126282
    • (1987) J Neurogenet , vol.4 , Issue.6 , pp. 309-314
    • Budnik, V.1    White, K.2
  • 34
    • 1242291763 scopus 로고    scopus 로고
    • Novel features of cryptochrome-mediated photoreception in the brain circadian clock of Drosophila
    • 496062
    • Klarsfeld A, Malpel S, Michard-Vanhee C, Picot M, Chelot E, Rouyer F, Novel features of cryptochrome-mediated photoreception in the brain circadian clock of Drosophila. J Neurosci. 2004;24(6):1468–77. doi: 10.1523/JNEUROSCI.3661-03.200414960620
    • (2004) J Neurosci , vol.24 , Issue.6 , pp. 1468-1477
    • Klarsfeld, A.1    Malpel, S.2    Michard-Vanhee, C.3    Picot, M.4    Chelot, E.5    Rouyer, F.6
  • 35
    • 40749157578 scopus 로고    scopus 로고
    • Intrinsic neurons of Drosophila mushroom bodies express short neuropeptide F: relations to extrinsic neurons expressing different neurotransmitters
    • 8205208,.;: –
    • Johard HA, Enell LE, Gustafsson E, Trifilieff P, Veenstra JA, Nassel DR, Intrinsic neurons of Drosophila mushroom bodies express short neuropeptide F: relations to extrinsic neurons expressing different neurotransmitters. J Comp Neurol2008;507:1479–96. doi: 10.1002/cne.2163618205208
    • (2008) J Comp Neurol , vol.507 , pp. 1479-1496
    • Johard, H.A.1    Enell, L.E.2    Gustafsson, E.3    Trifilieff, P.4    Veenstra, J.A.5    Nassel, D.R.6
  • 36
    • 84884758352 scopus 로고    scopus 로고
    • Short neuropeptide F is a sleep-promoting inhibitory modulator
    • 4094110, PubMed Central PMCID: PMC3792499
    • Shang Y, Donelson NC, Vecsey CG, Guo F, Rosbash M, Griffith LC, Short neuropeptide F is a sleep-promoting inhibitory modulator. Neuron. 2013;80(1):171–83. PubMed Central PMCID: PMC3792499. doi: 10.1016/j.neuron.2013.07.02924094110
    • (2013) Neuron , vol.80 , Issue.1 , pp. 171-183
    • Shang, Y.1    Donelson, N.C.2    Vecsey, C.G.3    Guo, F.4    Rosbash, M.5    Griffith, L.C.6
  • 37
    • 73949101875 scopus 로고    scopus 로고
    • Dissecting differential gene expression within the circadian neuronal circuit of Drosophila
    • 9966839, Epub 2009/12/08
    • Nagoshi E, Sugino K, Kula E, Okazaki E, Tachibana T, Nelson S, et al. Dissecting differential gene expression within the circadian neuronal circuit of Drosophila. Nat Neurosci. 2010;13(1):60–8. Epub 2009/12/08. doi: 10.1038/nn.245119966839
    • (2010) Nat Neurosci , vol.13 , Issue.1 , pp. 60-68
    • Nagoshi, E.1    Sugino, K.2    Kula, E.3    Okazaki, E.4    Tachibana, T.5    Nelson, S.6
  • 38
    • 84863717721 scopus 로고    scopus 로고
    • The nuclear receptor unfulfilled is required for free-running clocks in Drosophila pacemaker neurons
    • 265859
    • Beuchle D, Jaumouille E, Nagoshi E, The nuclear receptor unfulfilled is required for free-running clocks in Drosophila pacemaker neurons. Curr Biol. 2012;22(13):1221–7. doi: 10.1016/j.cub.2012.04.05222658597
    • (2012) Curr Biol , vol.22 , Issue.13 , pp. 1221-1227
    • Beuchle, D.1    Jaumouille, E.2    Nagoshi, E.3
  • 39
    • 79959630627 scopus 로고    scopus 로고
    • Imaging analysis of clock neurons reveals light buffers the wake-promoting effect of dopamine
    • 1685918, Epub 2011/06/21
    • Shang Y, Haynes P, Pirez N, Harrington KI, Guo F, Pollack J, et al. Imaging analysis of clock neurons reveals light buffers the wake-promoting effect of dopamine. Nat Neurosci. 2011;14(7):889–95. Epub 2011/06/21. doi: 10.1038/nn.286021685918
    • (2011) Nat Neurosci , vol.14 , Issue.7 , pp. 889-895
    • Shang, Y.1    Haynes, P.2    Pirez, N.3    Harrington, K.I.4    Guo, F.5    Pollack, J.6
  • 41
    • 79951779669 scopus 로고    scopus 로고
    • The novel gene twenty-four defines a critical translational step in the Drosophila clock
    • 1331043, Epub 2011/02/19. PubMed Central PMCID: PMC3073513
    • Lim C, Lee J, Choi C, Kilman VL, Kim J, Park SM, et al. The novel gene twenty-four defines a critical translational step in the Drosophila clock. Nature. 2011;470(7334):399–403. Epub 2011/02/19. PubMed Central PMCID: PMC3073513. doi: 10.1038/nature0972821331043
    • (2011) Nature , vol.470 , Issue.7334 , pp. 399-403
    • Lim, C.1    Lee, J.2    Choi, C.3    Kilman, V.L.4    Kim, J.5    Park, S.M.6
  • 42
    • 80053337011 scopus 로고    scopus 로고
    • Molecular organization of Drosophila neuroendocrine cells by Dimmed
    • 1885285, PubMed Central PMCID: PMC3184372
    • Park D, Hadzic T, Yin P, Rusch J, Abruzzi K, Rosbash M, et al. Molecular organization of Drosophila neuroendocrine cells by Dimmed. Curr Biol. 2011;21(18):1515–24. PubMed Central PMCID: PMC3184372. doi: 10.1016/j.cub.2011.08.01521885285
    • (2011) Curr Biol , vol.21 , Issue.18 , pp. 1515-1524
    • Park, D.1    Hadzic, T.2    Yin, P.3    Rusch, J.4    Abruzzi, K.5    Rosbash, M.6
  • 43
    • 0012835944 scopus 로고    scopus 로고
    • The bLHL protein dimmed controls neuroendocrine cell differentiation in Drosophila
    • 2642483,.;: –
    • Hewes RS, Park JH, Gauthier SA, Schaefer AM, Taghert PH, The bLHL protein dimmed controls neuroendocrine cell differentiation in Drosophila. Development. 2003;130:1771–81. 12642483
    • (2003) Development , vol.130 , pp. 1771-1781
    • Hewes, R.S.1    Park, J.H.2    Gauthier, S.A.3    Schaefer, A.M.4    Taghert, P.H.5
  • 44
    • 84891792734 scopus 로고    scopus 로고
    • cis-regulatory requirements for tissue-specific programs of the circadian clock
    • 433254
    • Meireles-Filho AC, Bardet AF, Yanez-Cuna JO, Stampfel G, Stark A, cis-regulatory requirements for tissue-specific programs of the circadian clock. Curr Biol. 2014;24(1):1–10. doi: 10.1016/j.cub.2013.11.01724332542
    • (2014) Curr Biol , vol.24 , Issue.1 , pp. 1-10
    • Meireles-Filho, A.C.1    Bardet, A.F.2    Yanez-Cuna, J.O.3    Stampfel, G.4    Stark, A.5
  • 45
    • 35948978549 scopus 로고    scopus 로고
    • Glutamate and its metabotropic receptor in Drosophila clock neuron circuits
    • 7729267, Epub 2007/08/31
    • Hamasaka Y, Rieger D, Parmentier ML, Grau Y, Helfrich-Forster C, Nassel DR, Glutamate and its metabotropic receptor in Drosophila clock neuron circuits. J Comp Neurol. 2007;505(1):32–45. Epub 2007/08/31. doi: 10.1002/cne.2147117729267
    • (2007) J Comp Neurol , vol.505 , Issue.1 , pp. 32-45
    • Hamasaka, Y.1    Rieger, D.2    Parmentier, M.L.3    Grau, Y.4    Helfrich-Forster, C.5    Nassel, D.R.6
  • 46
    • 84897431711 scopus 로고    scopus 로고
    • NeuroPID: a predictor for identifying neuropeptide precursors from metazoan proteomes
    • 433680
    • Ofer D, Linial M, NeuroPID: a predictor for identifying neuropeptide precursors from metazoan proteomes. Bioinformatics. 2014;30(7):931–40. doi: 10.1093/bioinformatics/btt72524336809
    • (2014) Bioinformatics , vol.30 , Issue.7 , pp. 931-940
    • Ofer, D.1    Linial, M.2
  • 47
    • 0035977158 scopus 로고    scopus 로고
    • Microarray analysis and organization of circadian gene expression in Drosophila
    • 1733057, Epub 2001/12/06
    • McDonald MJ, Rosbash M, Microarray analysis and organization of circadian gene expression in Drosophila. Cell. 2001;107(5):567–78. Epub 2001/12/06. 11733057
    • (2001) Cell , vol.107 , Issue.5 , pp. 567-578
    • McDonald, M.J.1    Rosbash, M.2
  • 48
    • 0035923746 scopus 로고    scopus 로고
    • Circadian regulation of gene expression systems in the Drosophila head
    • 171920
    • Claridge-Chang A, Wijnen H, Naef F, Boothroyd C, Rajewsky N, Young MW, Circadian regulation of gene expression systems in the Drosophila head. Neuron. 2001;32(4):657–71. 11719206
    • (2001) Neuron , vol.32 , Issue.4 , pp. 657-671
    • Claridge-Chang, A.1    Wijnen, H.2    Naef, F.3    Boothroyd, C.4    Rajewsky, N.5    Young, M.W.6
  • 49
    • 33645766967 scopus 로고    scopus 로고
    • Control of daily transcript oscillations in Drosophila by light and the circadian clock
    • 6565745,.; ():. Epub 2006/03/28. PubMed Central PMCID: PMC1413497
    • Wijnen H, Naef F, Boothroyd C, Claridge-Chang A, Young MW, Control of daily transcript oscillations in Drosophila by light and the circadian clock. PLoS Genet. 2006;2(3):e39. Epub 2006/03/28. PubMed Central PMCID: PMC1413497. doi: 10.1371/journal.pgen.002003916565745
    • (2006) PLoS Genet , vol.2 , Issue.3 , pp. e39
    • Wijnen, H.1    Naef, F.2    Boothroyd, C.3    Claridge-Chang, A.4    Young, M.W.5
  • 51
    • 84955270628 scopus 로고    scopus 로고
    • Temporal transcriptomics suggest that twin-peaking genes reset the clock
    • PubMed Central PMCID: PMCPMC4718813
    • Pembroke WG, Babbs A, Davies KE, Ponting CP, Oliver PL, Temporal transcriptomics suggest that twin-peaking genes reset the clock. Elife. 2015;4. PubMed Central PMCID: PMCPMC4718813.
    • (2015) Elife , vol.4
    • Pembroke, W.G.1    Babbs, A.2    Davies, K.E.3    Ponting, C.P.4    Oliver, P.L.5
  • 52
    • 84867667011 scopus 로고    scopus 로고
    • Transcriptional Architecture and Chromatin Landscape of the Core Circadian Clock in Mammals
    • Epub 2012/09/01
    • Koike N, Yoo SH, Huang HC, Kumar V, Lee C, Kim TK, et al. Transcriptional Architecture and Chromatin Landscape of the Core Circadian Clock in Mammals. Science. 2012. Epub 2012/09/01.
    • (2012) Science
    • Koike, N.1    Yoo, S.H.2    Huang, H.C.3    Kumar, V.4    Lee, C.5    Kim, T.K.6
  • 53
    • 84861441546 scopus 로고    scopus 로고
    • Deep sequencing the circadian and diurnal transcriptome of Drosophila brain
    • 2472103, Epub 2012/04/05. PubMed Central PMCID: PMC3396368
    • Hughes ME, Grant GR, Paquin C, Qian J, Nitabach MN, Deep sequencing the circadian and diurnal transcriptome of Drosophila brain. Genome Res. 2012;22(7):1266–81. Epub 2012/04/05. PubMed Central PMCID: PMC3396368. doi: 10.1101/gr.128876.11122472103
    • (2012) Genome Res , vol.22 , Issue.7 , pp. 1266-1281
    • Hughes, M.E.1    Grant, G.R.2    Paquin, C.3    Qian, J.4    Nitabach, M.N.5
  • 54
    • 84920495816 scopus 로고    scopus 로고
    • Differentially timed extracellular signals synchronize pacemaker neuron clocks
    • 5268747,..; ():. Epub 2014/10/01. PubMed Central PMCID: PMC4181961
    • Collins B, Kaplan HS, Cavey M, Lelito KR, Bahle AH, Zhu Z, et al. Differentially timed extracellular signals synchronize pacemaker neuron clocks. PLoS Biol. 2014;12(9):e1001959. Epub 2014/10/01. PubMed Central PMCID: PMC4181961. doi: 10.1371/journal.pbio.100195925268747
    • (2014) PLoS Biol , vol.12 , Issue.9 , pp. e1001959
    • Collins, B.1    Kaplan, H.S.2    Cavey, M.3    Lelito, K.R.4    Bahle, A.H.5    Zhu, Z.6
  • 55
    • 0030698128 scopus 로고    scopus 로고
    • Post-transcriptional regulation contributes to Drosophila clock gene mRNA cycling
    • 38459
    • So WV, Rosbash M, Post-transcriptional regulation contributes to Drosophila clock gene mRNA cycling. EMBO J. 1997;16(23):7146–55. doi: 10.1093/emboj/16.23.71469384591
    • (1997) EMBO J , vol.16 , Issue.23 , pp. 7146-7155
    • So, W.V.1    Rosbash, M.2
  • 56
    • 84959440542 scopus 로고    scopus 로고
    • . Synchronous Drosophila circadian pacemakers display nonsynchronous Ca(2)(+) rhythms in vivo
    • 691777
    • Liang X, Holy TE, Taghert PH,. Synchronous Drosophila circadian pacemakers display nonsynchronous Ca(2)(+) rhythms in vivo. Science. 2016;351(6276):976–81. doi: 10.1126/science.aad399726917772
    • (2016) Science , vol.351 , Issue.6276 , pp. 976-981
    • Liang, X.1    Holy, T.E.2    Taghert, P.H.3
  • 57
    • 58649119387 scopus 로고    scopus 로고
    • CLOCK expression identifies developing circadian oscillator neurons in the brains of Drosophila embryos
    • 9094242,.;:. Epub 2008/12/20. PubMed Central PMCID: PMC2628352
    • Houl JH, Ng F, Taylor P, Hardin PE, CLOCK expression identifies developing circadian oscillator neurons in the brains of Drosophila embryos. BMC Neurosci. 2008;9:119. Epub 2008/12/20. PubMed Central PMCID: PMC2628352. doi: 10.1186/1471-2202-9-11919094242
    • (2008) BMC Neurosci , vol.9 , pp. 119
    • Houl, J.H.1    Ng, F.2    Taylor, P.3    Hardin, P.E.4
  • 58
    • 33846944676 scopus 로고    scopus 로고
    • System-driven and oscillator-dependent circadian transcription in mice with a conditionally active liver clock
    • 7298173,.; ():. Epub 2007/02/15. PubMed Central PMCID: PMC1783671
    • Kornmann B, Schaad O, Bujard H, Takahashi JS, Schibler U, System-driven and oscillator-dependent circadian transcription in mice with a conditionally active liver clock. PLoS Biol. 2007;5(2):e34. Epub 2007/02/15. PubMed Central PMCID: PMC1783671. doi: 10.1371/journal.pbio.005003417298173
    • (2007) PLoS Biol , vol.5 , Issue.2 , pp. e34
    • Kornmann, B.1    Schaad, O.2    Bujard, H.3    Takahashi, J.S.4    Schibler, U.5
  • 60
    • 84946491777 scopus 로고    scopus 로고
    • Daytime spikes in dopaminergic activity drive rapid mood-cycling in mice
    • 568777
    • Sidor MM, Spencer SM, Dzirasa K, Parekh PK, Tye KM, Warden MR, et al. Daytime spikes in dopaminergic activity drive rapid mood-cycling in mice. Mol Psychiatry. 2015;20(11):1479–80. doi: 10.1038/mp.2015.825687774
    • (2015) Mol Psychiatry , vol.20 , Issue.11 , pp. 1479-1480
    • Sidor, M.M.1    Spencer, S.M.2    Dzirasa, K.3    Parekh, P.K.4    Tye, K.M.5    Warden, M.R.6
  • 61
    • 33644989316 scopus 로고    scopus 로고
    • Neuromedin U and its putative Drosophila homolog hugin
    • 6524341,.; ():. PubMed Central PMCID: PMCPMC1397894
    • Melcher C, Bader R, Walther S, Simakov O, Pankratz MJ, Neuromedin U and its putative Drosophila homolog hugin. PLoS Biol. 2006;4(3):e68. PubMed Central PMCID: PMCPMC1397894. doi: 10.1371/journal.pbio.004006816524341
    • (2006) PLoS Biol , vol.4 , Issue.3 , pp. e68
    • Melcher, C.1    Bader, R.2    Walther, S.3    Simakov, O.4    Pankratz, M.J.5
  • 62
    • 14944352959 scopus 로고    scopus 로고
    • Neuromedin-U is regulated by the circadian clock in the SCN of the mouse
    • 573310
    • Graham ES, Littlewood P, Turnbull Y, Mercer JG, Morgan PJ, Barrett P, Neuromedin-U is regulated by the circadian clock in the SCN of the mouse. Eur J Neurosci. 2005;21(3):814–9. doi: 10.1111/j.1460-9568.2005.03923.x15733101
    • (2005) Eur J Neurosci , vol.21 , Issue.3 , pp. 814-819
    • Graham, E.S.1    Littlewood, P.2    Turnbull, Y.3    Mercer, J.G.4    Morgan, P.J.5    Barrett, P.6
  • 64
    • 84881506759 scopus 로고    scopus 로고
    • Nascent-Seq reveals novel features of mouse circadian transcriptional regulation
    • 3150795,.;:. PubMed Central PMCID: PMC3492862
    • Menet JS, Rodriguez J, Abruzzi KC, Rosbash M, Nascent-Seq reveals novel features of mouse circadian transcriptional regulation. Elife. 2012;1:e00011. PubMed Central PMCID: PMC3492862. doi: 10.7554/eLife.0001123150795
    • (2012) Elife , vol.1 , pp. e00011
    • Menet, J.S.1    Rodriguez, J.2    Abruzzi, K.C.3    Rosbash, M.4
  • 65
    • 46749121763 scopus 로고    scopus 로고
    • Circadian control of membrane excitability in Drosophila melanogaster lateral ventral clock neurons
    • 8562620, Epub 2008/06/20. PubMed Central PMCID: PMC2680300
    • Cao G, Nitabach MN, Circadian control of membrane excitability in Drosophila melanogaster lateral ventral clock neurons. J Neurosci. 2008;28(25):6493–501. Epub 2008/06/20. PubMed Central PMCID: PMC2680300. doi: 10.1523/JNEUROSCI.1503-08.200818562620
    • (2008) J Neurosci , vol.28 , Issue.25 , pp. 6493-6501
    • Cao, G.1    Nitabach, M.N.2
  • 66
    • 0034724292 scopus 로고    scopus 로고
    • Differential regulation of circadian pacemaker output by separate clock genes in Drosophila
    • Park JH, Helfrich-Forster C, Lee G, Liu L, Rosbash M, Hall JC, Differential regulation of circadian pacemaker output by separate clock genes in Drosophila. ProcNatlAcadSciUSA. 2000;97(7):3608–13.
    • (2000) ProcNatlAcadSciUSA , vol.97 , Issue.7 , pp. 3608-3613
    • Park, J.H.1    Helfrich-Forster, C.2    Lee, G.3    Liu, L.4    Rosbash, M.5    Hall, J.C.6
  • 67
    • 84964977887 scopus 로고    scopus 로고
    • Functional PDF Signaling in the Drosophila Circadian Neural Circuit Is Gated by Ral A-Dependent Modulation
    • 7161526, PubMed Central PMCID: PMCPMC4873338
    • Klose M, Duvall LB, Li W, Liang X, Ren C, Steinbach JH, et al. Functional PDF Signaling in the Drosophila Circadian Neural Circuit Is Gated by Ral A-Dependent Modulation. Neuron. 2016;90(4):781–94. PubMed Central PMCID: PMCPMC4873338. doi: 10.1016/j.neuron.2016.04.00227161526
    • (2016) Neuron , vol.90 , Issue.4 , pp. 781-794
    • Klose, M.1    Duvall, L.B.2    Li, W.3    Liang, X.4    Ren, C.5    Steinbach, J.H.6
  • 68
    • 84904201438 scopus 로고    scopus 로고
    • Phosphorylation of the transcription activator CLOCK regulates progression through a approximately 24-h feedback loop to influence the circadian period in Drosophila
    • 4872414, PubMed Central PMCID: PMCPMC4094078
    • Mahesh G, Jeong E, Ng FS, Liu Y, Gunawardhana K, Houl JH, et al. Phosphorylation of the transcription activator CLOCK regulates progression through a approximately 24-h feedback loop to influence the circadian period in Drosophila. J Biol Chem. 2014;289(28):19681–93. PubMed Central PMCID: PMCPMC4094078. doi: 10.1074/jbc.M114.56849324872414
    • (2014) J Biol Chem , vol.289 , Issue.28 , pp. 19681-19693
    • Mahesh, G.1    Jeong, E.2    Ng, F.S.3    Liu, Y.4    Gunawardhana, K.5    Houl, J.H.6
  • 69
    • 84960811642 scopus 로고    scopus 로고
    • Memory-Relevant Mushroom Body Output Synapses Are Cholinergic
    • 6948892, PubMed Central PMCID: PMCPMC4819445
    • Barnstedt O, Owald D, Felsenberg J, Brain R, Moszynski JP, Talbot CB, et al. Memory-Relevant Mushroom Body Output Synapses Are Cholinergic. Neuron. 2016;89(6):1237–47. PubMed Central PMCID: PMCPMC4819445. doi: 10.1016/j.neuron.2016.02.01526948892
    • (2016) Neuron , vol.89 , Issue.6 , pp. 1237-1247
    • Barnstedt, O.1    Owald, D.2    Felsenberg, J.3    Brain, R.4    Moszynski, J.P.5    Talbot, C.B.6
  • 70
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: discovering splice junctions with RNA-Seq
    • 9289445, Epub 2009/03/18. PubMed Central PMCID: PMC2672628
    • Trapnell C, Pachter L, Salzberg SL, TopHat: discovering splice junctions with RNA-Seq. Bioinformatics. 2009;25(9):1105–11. Epub 2009/03/18. PubMed Central PMCID: PMC2672628. doi: 10.1093/bioinformatics/btp12019289445
    • (2009) Bioinformatics , vol.25 , Issue.9 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 71
    • 84876996918 scopus 로고    scopus 로고
    • TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
    • 3618408,.; ():. PubMed Central PMCID: PMC4053844
    • Kim D, Pertea G, Trapnell C, Pimentel H, Kelley R, Salzberg SL, TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome biology. 2013;14(4):R36. PubMed Central PMCID: PMC4053844. doi: 10.1186/gb-2013-14-4-r3623618408
    • (2013) Genome biology , vol.14 , Issue.4 , pp. R36
    • Kim, D.1    Pertea, G.2    Trapnell, C.3    Pimentel, H.4    Kelley, R.5    Salzberg, S.L.6
  • 72
    • 84989922022 scopus 로고    scopus 로고
    • End Sequence Analysis Toolkit (ESAT) expands the extractable information from single-cell RNA-seq data
    • 7470110, PubMed Central PMCID: PMCPMC5052061
    • Derr A, Yang C, Zilionis R, Sergushichev A, Blodgett DM, Redick S, et al. End Sequence Analysis Toolkit (ESAT) expands the extractable information from single-cell RNA-seq data. Genome Res. 2016;26(10):1397–410. PubMed Central PMCID: PMCPMC5052061. doi: 10.1101/gr.207902.11627470110
    • (2016) Genome Res , vol.26 , Issue.10 , pp. 1397-1410
    • Derr, A.1    Yang, C.2    Zilionis, R.3    Sergushichev, A.4    Blodgett, D.M.5    Redick, S.6
  • 73
    • 84859885816 scopus 로고    scopus 로고
    • Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
    • 2383036, PubMed Central PMCID: PMCPMC3334321
    • Trapnell C, Roberts A, Goff L, Pertea G, Kim D, Kelley DR, et al. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat Protoc. 2012;7(3):562–78. PubMed Central PMCID: PMCPMC3334321. doi: 10.1038/nprot.2012.01622383036
    • (2012) Nat Protoc , vol.7 , Issue.3 , pp. 562-578
    • Trapnell, C.1    Roberts, A.2    Goff, L.3    Pertea, G.4    Kim, D.5    Kelley, D.R.6
  • 74
    • 84864880991 scopus 로고    scopus 로고
    • Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
    • 2820318, PubMed Central PMCID: PMC3467340
    • Ramskold D, Luo S, Wang YC, Li R, Deng Q, Faridani OR, et al. Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells. Nat Biotechnol. 2012;30(8):777–82. PubMed Central PMCID: PMC3467340. doi: 10.1038/nbt.228222820318
    • (2012) Nat Biotechnol , vol.30 , Issue.8 , pp. 777-782
    • Ramskold, D.1    Luo, S.2    Wang, Y.C.3    Li, R.4    Deng, Q.5    Faridani, O.R.6
  • 75
    • 70349800685 scopus 로고    scopus 로고
    • Eight different types of dopaminergic neurons innervate the Drosophila mushroom body neuropil: anatomical and physiological heterogeneity
    • 9597562,.;:. PubMed Central PMCID: PMCPMC2708966
    • Mao Z, Davis RL, Eight different types of dopaminergic neurons innervate the Drosophila mushroom body neuropil: anatomical and physiological heterogeneity. Front Neural Circuits. 2009;3:5. PubMed Central PMCID: PMCPMC2708966. doi: 10.3389/neuro.04.005.200919597562
    • (2009) Front Neural Circuits , vol.3 , pp. 5
    • Mao, Z.1    Davis, R.L.2
  • 76
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID Bioinformatics Resources
    • 913195
    • Huang D, Sherman B, Lempicki R, Systematic and integrative analysis of large gene lists using DAVID Bioinformatics Resources. Nature Protocols. 2009;4(1):44–57. doi: 10.1038/nprot.2008.21119131956
    • (2009) Nature Protocols , vol.4 , Issue.1 , pp. 44-57
    • Huang, D.1    Sherman, B.2    Lempicki, R.3
  • 77
    • 58549112996 scopus 로고    scopus 로고
    • Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
    • 9033363, PubMed Central PMCID: PMCPMC2615629
    • Huang da W, Sherman BT, Lempicki RA, Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic acids research. 2009;37(1):1–13. PubMed Central PMCID: PMCPMC2615629. doi: 10.1093/nar/gkn92319033363
    • (2009) Nucleic acids research , vol.37 , Issue.1 , pp. 1-13
    • Huang da, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 78
    • 36048966491 scopus 로고    scopus 로고
    • FlyMine: an integrated database for Drosophila and Anopheles genomics
    • 7615057,..; ():. PubMed Central PMCID: PMCPMC2323218
    • Lyne R, Smith R, Rutherford K, Wakeling M, Varley A, Guillier F, et al. FlyMine: an integrated database for Drosophila and Anopheles genomics. Genome biology. 2007;8(7):R129. PubMed Central PMCID: PMCPMC2323218. doi: 10.1186/gb-2007-8-7-r12917615057
    • (2007) Genome biology , vol.8 , Issue.7 , pp. R129
    • Lyne, R.1    Smith, R.2    Rutherford, K.3    Wakeling, M.4    Varley, A.5    Guillier, F.6
  • 79
    • 16844362269 scopus 로고    scopus 로고
    • Molecular and statistical tools for circadian transcript profiling
    • 5817298,.;: –. Epub 2005/04/09
    • Wijnen H, Naef F, Young MW, Molecular and statistical tools for circadian transcript profiling. Methods Enzymol. 2005;393:341–65. Epub 2005/04/09. doi: 10.1016/S0076-6879(05)93015-215817298
    • (2005) Methods Enzymol , vol.393 , pp. 341-365
    • Wijnen, H.1    Naef, F.2    Young, M.W.3
  • 80
    • 77957266573 scopus 로고    scopus 로고
    • JTK_CYCLE: an efficient nonparametric algorithm for detecting rhythmic components in genome-scale data sets
    • 0876817, PubMed Central PMCID: PMCPMC3119870
    • Hughes ME, Hogenesch JB, Kornacker K, JTK_CYCLE: an efficient nonparametric algorithm for detecting rhythmic components in genome-scale data sets. J Biol Rhythms. 2010;25(5):372–80. PubMed Central PMCID: PMCPMC3119870. doi: 10.1177/074873041037971120876817
    • (2010) J Biol Rhythms , vol.25 , Issue.5 , pp. 372-380
    • Hughes, M.E.1    Hogenesch, J.B.2    Kornacker, K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.