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Volumn 44, Issue W1, 2016, Pages W98-W104

KeyPathwayMinerWeb: online multi-omics network enrichment

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN; HTT PROTEIN, HUMAN; HUNTINGTIN;

EID: 85010938432     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/NAR/GKW373     Document Type: Article
Times cited : (41)

References (28)
  • 5
    • 34548855730 scopus 로고    scopus 로고
    • Unequal evolutionary conservation of human protein interactions in interologous networks
    • Brown,K.R. and Jurisica,I. (2007) Unequal evolutionary conservation of human protein interactions in interologous networks. Genome Biol., 8, R95.
    • (2007) Genome Biol , vol.8 , pp. R95
    • Brown, K.R.1    Jurisica, I.2
  • 6
    • 43249091569 scopus 로고    scopus 로고
    • Linking Cytoscape and the corynebacterial reference database CoryneRegNet
    • Baumbach,J. and Apeltsin,L. (2008) Linking Cytoscape and the corynebacterial reference database CoryneRegNet. BMC Genomics, 9, 184.
    • (2008) BMC Genomics , vol.9 , pp. 184
    • Baumbach, J.1    Apeltsin, L.2
  • 7
    • 0000801240 scopus 로고    scopus 로고
    • Discovering regulatory and signalling circuits in molecular interaction networks
    • (Suppl. 1)
    • Ideker,T., Ozier,O., Schwikowski,B. and Siegel,A.F. (2002) Discovering regulatory and signalling circuits in molecular interaction networks. Bioinformatics, 18(Suppl. 1), S233–S240.
    • (2002) Bioinformatics , vol.18 , pp. S233-S240
    • Ideker, T.1    Ozier, O.2    Schwikowski, B.3    Siegel, A.F.4
  • 8
    • 77951972600 scopus 로고    scopus 로고
    • BioNet: an R-Package for the functional analysis of biological networks
    • Beisser,D., Klau,G.W., Dandekar,T., Müller,T. and Dittrich,M.T. (2010) BioNet: an R-Package for the functional analysis of biological networks. Bioinformatics, 26, 1129–1130.
    • (2010) Bioinformatics , vol.26 , pp. 1129-1130
    • Beisser, D.1    Klau, G.W.2    Dandekar, T.3    Müller, T.4    Dittrich, M.T.5
  • 9
    • 78149460182 scopus 로고    scopus 로고
    • DEGAS: de novo discovery of dysregulated pathways in human diseases
    • Ulitsky,I., Krishnamurthy,A., Karp,R.M. and Shamir,R. (2010) DEGAS: de novo discovery of dysregulated pathways in human diseases. PLoS One, 5, e13367.
    • (2010) PLoS One , vol.5 , pp. e13367
    • Ulitsky, I.1    Krishnamurthy, A.2    Karp, R.M.3    Shamir, R.4
  • 10
    • 13244253770 scopus 로고    scopus 로고
    • Graph-based iterative Group Analysis enhances microarray interpretation
    • Breitling,R., Amtmann,A. and Herzyk,P. (2004) Graph-based iterative Group Analysis enhances microarray interpretation. BMC Bioinformatics, 5, 100.
    • (2004) BMC Bioinformatics , vol.5 , pp. 100
    • Breitling, R.1    Amtmann, A.2    Herzyk, P.3
  • 11
    • 79952389826 scopus 로고    scopus 로고
    • Algorithms for detecting significantly mutated pathways in cancer
    • Vandin,F., Upfal,E. and Raphael,B.J. (2011) Algorithms for detecting significantly mutated pathways in cancer. J. Comput. Biol., 18, 507–522.
    • (2011) J. Comput. Biol , vol.18 , pp. 507-522
    • Vandin, F.1    Upfal, E.2    Raphael, B.J.3
  • 12
    • 84863643651 scopus 로고    scopus 로고
    • KeyPathwayMiner: detecting case-specific biological pathways using expression data
    • Alcaraz,N., Kücük,H., Weile,J., Wipat,A. and Baumbach,J. (2011) KeyPathwayMiner: detecting case-specific biological pathways using expression data. Internet Math., 7, 299–313.
    • (2011) Internet Math , vol.7 , pp. 299-313
    • Alcaraz, N.1    Kücük, H.2    Weile, J.3    Wipat, A.4    Baumbach, J.5
  • 16
    • 84908179703 scopus 로고    scopus 로고
    • Elucidation of epithelial-mesenchymal transition-related pathways in a triple-negative breast cancer cell line model by multi-omics interactome analysis
    • Pauling,J.K., Christensen,A.G., Batra,R., Alcaraz,N., Barbosa,E., Larsen,M.R., Beck,H.C., Leth-Larsen,R., Azevedo,V., Ditzel,H.J. et al. (2014) Elucidation of epithelial-mesenchymal transition-related pathways in a triple-negative breast cancer cell line model by multi-omics interactome analysis. Integr. Biol., 6, 1058–1068.
    • (2014) Integr. Biol , vol.6 , pp. 1058-1068
    • Pauling, J.K.1    Christensen, A.G.2    Batra, R.3    Alcaraz, N.4    Barbosa, E.5    Larsen, M.R.6    Beck, H.C.7    Leth-Larsen, R.8    Azevedo, V.9    Ditzel, H.J.10
  • 19
    • 47249120912 scopus 로고    scopus 로고
    • Detecting disease-specific dysregulated pathways via analysis of clinical expression profiles
    • Vingron,M and Wong,L (eds). Springer, Berlin Heidelberg
    • Ulitsky,I., Karp,R.M. and Shamir,R. (2008) Detecting disease-specific dysregulated pathways via analysis of clinical expression profiles. In: Vingron,M and Wong,L (eds). Research in Computational Molecular Biology. Springer, Berlin Heidelberg, pp. 347–359.
    • (2008) Research in Computational Molecular Biology , pp. 347-359
    • Ulitsky, I.1    Karp, R.M.2    Shamir, R.3
  • 24
    • 84876008750 scopus 로고    scopus 로고
    • The ConsensusPathDB interaction database: 2013 update
    • Kamburov,A., Stelzl,U., Lehrach,H. and Herwig,R. (2013) The ConsensusPathDB interaction database: 2013 update. Nucleic Acids Res., 41, D793–D800.
    • (2013) Nucleic Acids Res , vol.41 , pp. D793-D800
    • Kamburov, A.1    Stelzl, U.2    Lehrach, H.3    Herwig, R.4
  • 26
    • 84873601726 scopus 로고    scopus 로고
    • A combination of α-fetoprotein and des-γ-carboxy prothrombin is superior in detection of hepatocellular carcinoma
    • Ertle,J.M., Heider,D., Wichert,M., Keller,B., Kueper,R., Hilgard,P., Gerken,G. and Schlaak,J.F. (2013) A combination of α-fetoprotein and des-γ-carboxy prothrombin is superior in detection of hepatocellular carcinoma. Digestion, 87, 121–131.
    • (2013) Digestion , vol.87 , pp. 121-131
    • Ertle, J.M.1    Heider, D.2    Wichert, M.3    Keller, B.4    Kueper, R.5    Hilgard, P.6    Gerken, G.7    Schlaak, J.F.8
  • 27


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.