Proteome profiling outperforms transcriptome profiling for coexpression based gene function prediction

Molecular and Cellular Proteomics

Volumn 16, Issue 1, 2017, Pages 121-134

  Wang, Jing ^a,b   Ma, Zihao ^a   Carr, Steven A ^c   Mertins, Philipp ^c   Zhang, Hui ^d   Zhang, Zhen ^d   Chan, Daniel W ^d   Ellis, Matthew J C ^b   Townsend, R Reid ^e   Smith, Richard D ^f   McDermott, Jason E ^f   Chen, Xian ^g   Paulovich, Amanda G ^h   Boja, Emily S ⁱ   Mesri, Mehdi ⁱ   Kinsinger, Christopher R ^a   Rodriguez, Henry ^a   Rodland, Karin D ^f   Lieblerc, Daniel C ^j   Zhang, Bing ^a,b  

^a VANDERBILT UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b BAYLOR COLLEGE OF MEDICINE   (United States)

^c BROAD INSTITUTE OF MIT AND HARVARD   (United States)

^d DEPARTMENT OF PATHOLOGY   (United States)

^e WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^f PACIFIC NORTHWEST NATIONAL LABORATORY   (United States)

^g UNIVERSITY OF NORTH CAROLINA   (United States)

^h Fred Hutchinson Cancer Research Center   (United States)

ⁱ NATIONAL CANCER INSTITUTE   (United States)

^j VANDERBILT INGRAM CANCER CENTER   (United States)

more..

Author keywords

[No Author keywords available]

Indexed keywords

AE BINDING PROTEIN 1; BINDING PROTEIN; LIGASE; MESSENGER RNA; PROTEOME; RAS PROTEIN; TRANSCRIPTOME; UNCLASSIFIED DRUG; UVOMORULIN;

ANTIGEN PRESENTATION; ARTICLE; BIOLOGICAL PHENOMENA AND FUNCTIONS CONCERNING THE ENTIRE ORGANISM; BREAST CANCER; CELL ADHESION; CELL CYCLE; CELL VIABILITY; CHROMOSOME; CITRIC ACID CYCLE; COLORECTAL CANCER; COMPLEMENT ACTIVATION; EPITHELIAL MESENCHYMAL TRANSITION; FEMALE; FOCAL ADHESION; GENE EXPRESSION; GENE FUNCTION; GENE LOCATION; GENE ONTOLOGY; GLUCONEOGENESIS; HUMAN; HUMAN CELL; LIPID OXIDATION; LIPOGENESIS; OVARY CANCER; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN PROTEIN INTERACTION; RNA SEQUENCE; SPLICEOSOME; ALGORITHM; CHROMOSOMAL MAPPING; DNA MICROARRAY; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE REGULATORY NETWORK; GENETICS; MASS SPECTROMETRY; METABOLISM; NEOPLASM; PROCEDURES; PROTEOMICS; WEB BROWSER;

ALGORITHMS; CHROMOSOME MAPPING; EPITHELIAL-MESENCHYMAL TRANSITION; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, NEOPLASTIC; GENE REGULATORY NETWORKS; HUMANS; MASS SPECTROMETRY; NEOPLASMS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PROTEIN INTERACTION MAPS; PROTEOMICS; WEB BROWSER;

EID: 85008490068     PISSN: 15359476     EISSN: 15359484     Source Type: Journal    
DOI: 10.1074/mcp.M116.060301     Document Type: Article

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