-
1
-
-
84899637850
-
Rice germline-specific Argonaute MEL1 protein binds to phasiRNAs generated from more than 700 lincRNAs
-
Komiya R, et al. (2014) Rice germline-specific Argonaute MEL1 protein binds to phasiRNAs generated from more than 700 lincRNAs. Plant J 78(3):385-397.
-
(2014)
Plant J
, vol.78
, Issue.3
, pp. 385-397
-
-
Komiya, R.1
-
2
-
-
68149119262
-
Clusters and superclusters of phased small RNAs in the developing inflorescence of rice
-
Johnson C, et al. (2009) Clusters and superclusters of phased small RNAs in the developing inflorescence of rice. Genome Res 19(8):1429-1440.
-
(2009)
Genome Res
, vol.19
, Issue.8
, pp. 1429-1440
-
-
Johnson, C.1
-
3
-
-
84929380410
-
Noncoding RNA. PiRNA-guided transposon cleavage initiates Zucchini-dependent, phased piRNA production
-
Han BW, Wang W, Li C, Weng Z, Zamore PD (2015) Noncoding RNA. piRNA-guided transposon cleavage initiates Zucchini-dependent, phased piRNA production. Science 348(6236):817-821.
-
(2015)
Science
, vol.348
, Issue.6236
, pp. 817-821
-
-
Han, B.W.1
Wang, W.2
Li, C.3
Weng, Z.4
Zamore, P.D.5
-
4
-
-
84929353775
-
Noncoding RNA. PiRNA-guided slicing specifies transcripts for Zucchini-dependent, phased piRNA biogenesis
-
Mohn F, Handler D, Brennecke J (2015) Noncoding RNA. piRNA-guided slicing specifies transcripts for Zucchini-dependent, phased piRNA biogenesis. Science 348(6236):812-817.
-
(2015)
Science
, vol.348
, Issue.6236
, pp. 812-817
-
-
Mohn, F.1
Handler, D.2
Brennecke, J.3
-
5
-
-
17444430392
-
MicroRNA-directed phasing during trans-acting siRNA biogenesis in plants
-
Allen E, Xie Z, Gustafson AM, Carrington JC (2005) microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell 121(2):207-221.
-
(2005)
Cell
, vol.121
, Issue.2
, pp. 207-221
-
-
Allen, E.1
Xie, Z.2
Gustafson, A.M.3
Carrington, J.C.4
-
6
-
-
33750440526
-
A two-hit trigger for siRNA biogenesis in plants
-
Axtell MJ, Jan C, Rajagopalan R, Bartel DP (2006) A two-hit trigger for siRNA biogenesis in plants. Cell 127(3):565-577.
-
(2006)
Cell
, vol.127
, Issue.3
, pp. 565-577
-
-
Axtell, M.J.1
Jan, C.2
Rajagopalan, R.3
Bartel, D.P.4
-
7
-
-
33847652140
-
Bioinformatic prediction and experimental validation of a microRNA-directed tandem trans-acting siRNA cascade in Arabidopsis
-
Chen HM, Li YH, Wu SH (2007) Bioinformatic prediction and experimental validation of a microRNA-directed tandem trans-acting siRNA cascade in Arabidopsis. Proc Natl Acad Sci USA 104(9):3318-3323.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, Issue.9
, pp. 3318-3323
-
-
Chen, H.M.1
Li, Y.H.2
Wu, S.H.3
-
8
-
-
82955207556
-
MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
-
Zhai J, et al. (2011) MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs. Genes Dev 25(23):2540-2553.
-
(2011)
Genes Dev
, vol.25
, Issue.23
, pp. 2540-2553
-
-
Zhai, J.1
-
9
-
-
84961288187
-
An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
-
Arikit S, et al. (2014) An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes. Plant Cell 26(12):4584-4601.
-
(2014)
Plant Cell
, vol.26
, Issue.12
, pp. 4584-4601
-
-
Arikit, S.1
-
10
-
-
84924308731
-
Spatiotemporally dynamic, cell-type-dependent premeiotic and meiotic phasiRNAs in maize anthers
-
Zhai J, et al. (2015) Spatiotemporally dynamic, cell-type-dependent premeiotic and meiotic phasiRNAs in maize anthers. Proc Natl Acad Sci USA 112(10):3146-3151.
-
(2015)
Proc Natl Acad Sci USA
, vol.112
, Issue.10
, pp. 3146-3151
-
-
Zhai, J.1
-
11
-
-
84940919383
-
Novel and recently evolved miRNA clusters regulate expansive F-box gene networks through phasiRNAs in wild diploid strawberry
-
Xia R, Ye S, Liu Z, Meyers B, Liu Z (2015) Novel and recently evolved miRNA clusters regulate expansive F-box gene networks through phasiRNAs in wild diploid strawberry. Plant Physiol 169(1):594-610.
-
(2015)
Plant Physiol
, vol.169
, Issue.1
, pp. 594-610
-
-
Xia, R.1
Ye, S.2
Liu, Z.3
Meyers, B.4
Liu, Z.5
-
12
-
-
0001866438
-
The discovery and preliminary studies of the photoperiod-sensitive recessive male sterile rice (Oryza sativa L. Subsp. Japonica)
-
Shi M (1985) The discovery and preliminary studies of the photoperiod-sensitive recessive male sterile rice (Oryza sativa L. subsp. japonica). Zhongguo Nong Ye Ke Xue 2:44-48.
-
(1985)
Zhongguo Nong Ye Ke Xue
, vol.2
, pp. 44-48
-
-
Shi, M.1
-
13
-
-
84862813608
-
Current situation and suggestions for development of two-line hybrid rice in China
-
Si H, Liu W, Fu Y, Sun Z, Hu G (2011) Current situation and suggestions for development of two-line hybrid rice in China. Chin J Rice Sci 25(5):544-552.
-
(2011)
Chin J Rice Sci
, vol.25
, Issue.5
, pp. 544-552
-
-
Si, H.1
Liu, W.2
Fu, Y.3
Sun, Z.4
Hu, G.5
-
14
-
-
0028059292
-
Using bulked extremes and recessive class to map genes for photoperiod-sensitive genic male sterility in rice
-
Zhang Q, et al. (1994) Using bulked extremes and recessive class to map genes for photoperiod-sensitive genic male sterility in rice. Proc Natl Acad Sci USA 91(18):8675-8679.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, Issue.18
, pp. 8675-8679
-
-
Zhang, Q.1
-
15
-
-
0033370181
-
Mapping and genetic analysis of the genes for photoperiod-sensitive genic male sterility in rice using the original mutant Nongken 58S
-
Mei M, Dai X, Xu C, Zhang Q (1999) Mapping and genetic analysis of the genes for photoperiod-sensitive genic male sterility in rice using the original mutant Nongken 58S. Crop Sci 39(6):1711-1715.
-
(1999)
Crop Sci
, vol.39
, Issue.6
, pp. 1711-1715
-
-
Mei, M.1
Dai, X.2
Xu, C.3
Zhang, Q.4
-
16
-
-
84863115947
-
A long noncoding RNA regulates photoperiod-sensitive male sterility, an essential component of hybrid rice
-
Ding J, et al. (2012) A long noncoding RNA regulates photoperiod-sensitive male sterility, an essential component of hybrid rice. Proc Natl Acad Sci USA 109(7):2654-2659.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, Issue.7
, pp. 2654-2659
-
-
Ding, J.1
-
17
-
-
84870575059
-
RNA-directed DNA methylation is involved in regulating photoperiod-sensitive male sterility in rice
-
Ding J, et al. (2012) RNA-directed DNA methylation is involved in regulating photoperiod-sensitive male sterility in rice. Mol Plant 5(6):1210-1216.
-
(2012)
Mol Plant
, vol.5
, Issue.6
, pp. 1210-1216
-
-
Ding, J.1
-
18
-
-
0034784836
-
Identification of an 85-kb DNA fragment containing pms1, a locus for photoperiod-sensitive genic male sterility in rice
-
Liu N, et al. (2001) Identification of an 85-kb DNA fragment containing pms1, a locus for photoperiod-sensitive genic male sterility in rice. Mol Genet Genomics 266(2):271-275.
-
(2001)
Mol Genet Genomics
, vol.266
, Issue.2
, pp. 271-275
-
-
Liu, N.1
-
19
-
-
34247334932
-
Rapid genome evolution in Pms1 region of rice revealed by comparative sequence analysis
-
Yu J, et al. (2007) Rapid genome evolution in Pms1 region of rice revealed by comparative sequence analysis. Chin Sci Bull 52(7):912-921.
-
(2007)
Chin Sci Bull
, vol.52
, Issue.7
, pp. 912-921
-
-
Yu, J.1
-
20
-
-
0001700891
-
Pms1 genomic region does not cause fertility difference between the photoperiod-sensitive male sterile rice Nongken 58S and normal Nongken 58
-
Wang F, Mei M, Xu C, Zhang Q (1997) pms1 genomic region does not cause fertility difference between the photoperiod-sensitive male sterile rice Nongken 58S and normal Nongken 58. Acta Bot Sin 39(10):922-925.
-
(1997)
Acta Bot Sin
, vol.39
, Issue.10
, pp. 922-925
-
-
Wang, F.1
Mei, M.2
Xu, C.3
Zhang, Q.4
-
21
-
-
84869881863
-
Transposable elements reveal a stem cell-specific class of long noncoding RNAs
-
Kelley D, Rinn J (2012) Transposable elements reveal a stem cell-specific class of long noncoding RNAs. Genome Biol 13(11):R107.
-
(2012)
Genome Biol
, vol.13
, Issue.11
, pp. R107
-
-
Kelley, D.1
Rinn, J.2
-
22
-
-
0013375114
-
Studies on the critical stage of fertility change induced by light and its phase development in HPGMR
-
Yuan S, Zhang Z, Xu C (1988) Studies on the critical stage of fertility change induced by light and its phase development in HPGMR. Acta Agron Sin 14(1):7-13.
-
(1988)
Acta Agron Sin
, vol.14
, Issue.1
, pp. 7-13
-
-
Yuan, S.1
Zhang, Z.2
Xu, C.3
-
23
-
-
84856288115
-
Roles of DCL4 and DCL3b in rice phased small RNA biogenesis
-
Song X, et al. (2012) Roles of DCL4 and DCL3b in rice phased small RNA biogenesis. Plant J 69(3):462-474.
-
(2012)
Plant J
, vol.69
, Issue.3
, pp. 462-474
-
-
Song, X.1
-
24
-
-
0037144457
-
Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA
-
Llave C, Xie Z, Kasschau KD, Carrington JC (2002) Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA. Science 297(5589):2053-2056.
-
(2002)
Science
, vol.297
, Issue.5589
, pp. 2053-2056
-
-
Llave, C.1
Xie, Z.2
Kasschau, K.D.3
Carrington, J.C.4
-
25
-
-
84864441023
-
Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development
-
Song X, et al. (2012) Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development. Plant J 71(3):378-389.
-
(2012)
Plant J
, vol.71
, Issue.3
, pp. 378-389
-
-
Song, X.1
-
26
-
-
77956989755
-
22-Nucleotide RNAs trigger secondary siRNA biogenesis in plants
-
Chen HM, et al. (2010) 22-Nucleotide RNAs trigger secondary siRNA biogenesis in plants. Proc Natl Acad Sci USA 107(34):15269-15274.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, Issue.34
, pp. 15269-15274
-
-
Chen, H.M.1
-
27
-
-
84860126087
-
A microRNA superfamily regulates nucleotide binding site-leucine-rich repeats and other mRNAs
-
Shivaprasad PV, et al. (2012) A microRNA superfamily regulates nucleotide binding site-leucine-rich repeats and other mRNAs. Plant Cell 24(3):859-874.
-
(2012)
Plant Cell
, vol.24
, Issue.3
, pp. 859-874
-
-
Shivaprasad, P.V.1
-
28
-
-
84855910121
-
RDR6-mediated synthesis of complementary RNA is terminated by miRNA stably bound to template RNA
-
Rajeswaran R, Pooggin MM (2012) RDR6-mediated synthesis of complementary RNA is terminated by miRNA stably bound to template RNA. Nucleic Acids Res 40(2):594-599.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.2
, pp. 594-599
-
-
Rajeswaran, R.1
Pooggin, M.M.2
-
29
-
-
23044513238
-
Pms3 is the locus causing the original photoperiod-sensitive male sterility mutation of 'Nongken 58S'
-
Mei M, et al. (1999) pms3 is the locus causing the original photoperiod-sensitive male sterility mutation of 'Nongken 58S'. Sci China C Life Sci 42(3):316-322.
-
(1999)
Sci China C Life Sci
, vol.42
, Issue.3
, pp. 316-322
-
-
Mei, M.1
-
30
-
-
35348889711
-
A germ cell specific gene of the ARGONAUTE family is essential for the progression of premeiotic mitosis and meiosis during sporogenesis in rice
-
Nonomura K, et al. (2007) A germ cell specific gene of the ARGONAUTE family is essential for the progression of premeiotic mitosis and meiosis during sporogenesis in rice. Plant Cell 19(8):2583-2594.
-
(2007)
Plant Cell
, vol.19
, Issue.8
, pp. 2583-2594
-
-
Nonomura, K.1
-
31
-
-
35748967300
-
Oryza sativa dicer-like4 reveals a key role for small interfering RNA silencing in plant development
-
Liu B, et al. (2007) Oryza sativa dicer-like4 reveals a key role for small interfering RNA silencing in plant development. Plant Cell 19(9):2705-2718.
-
(2007)
Plant Cell
, vol.19
, Issue.9
, pp. 2705-2718
-
-
Liu, B.1
-
32
-
-
34250717043
-
Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 pathway in Arabidopsis reveals dependency on miRNA- and tasiRNA-directed targeting
-
Howell MD, et al. (2007) Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 pathway in Arabidopsis reveals dependency on miRNA- and tasiRNA-directed targeting. Plant Cell 19(3):926-942.
-
(2007)
Plant Cell
, vol.19
, Issue.3
, pp. 926-942
-
-
Howell, M.D.1
-
33
-
-
34548059198
-
A miR-24 microRNA binding-site polymorphism in dihydrofolate reductase gene leads to methotrexate resistance
-
Mishra PJ, et al. (2007) A miR-24 microRNA binding-site polymorphism in dihydrofolate reductase gene leads to methotrexate resistance. Proc Natl Acad Sci USA 104(33):13513-13518.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, Issue.33
, pp. 13513-13518
-
-
Mishra, P.J.1
-
34
-
-
80053436022
-
Germline genetic variants disturbing the Let-7/LIN28 doublenegative feedback loop alter breast cancer susceptibility
-
Chen AX, et al. (2011) Germline genetic variants disturbing the Let-7/LIN28 doublenegative feedback loop alter breast cancer susceptibility. PLoS Genet 7(9):e1002259.
-
(2011)
PLoS Genet
, vol.7
, Issue.9
, pp. e1002259
-
-
Chen, A.X.1
-
35
-
-
84897451407
-
Determinants beyond both complementarity and cleavage govern microR159 efficacy in Arabidopsis
-
Li J, Reichel M, Millar AA (2014) Determinants beyond both complementarity and cleavage govern microR159 efficacy in Arabidopsis. PLoS Genet 10(3):e1004232.
-
(2014)
PLoS Genet
, vol.10
, Issue.3
, pp. e1004232
-
-
Li, J.1
Reichel, M.2
Millar, A.A.3
-
36
-
-
84862777808
-
Photoperiod- and thermo-sensitive genic male sterility in rice are caused by a point mutation in a novel noncoding RNA that produces a small RNA
-
Zhou H, et al. (2012) Photoperiod- and thermo-sensitive genic male sterility in rice are caused by a point mutation in a novel noncoding RNA that produces a small RNA. Cell Res 22(4):649-660.
-
(2012)
Cell Res
, vol.22
, Issue.4
, pp. 649-660
-
-
Zhou, H.1
-
37
-
-
84899474289
-
Rapid construction of parallel analysis of RNA end (PARE) libraries for Illumina sequencing
-
Zhai J, Arikit S, Simon SA, Kingham BF, Meyers BC (2014) Rapid construction of parallel analysis of RNA end (PARE) libraries for Illumina sequencing. Methods 67(1):84-90.
-
(2014)
Methods
, vol.67
, Issue.1
, pp. 84-90
-
-
Zhai, J.1
Arikit, S.2
Simon, S.A.3
Kingham, B.F.4
Meyers, B.C.5
-
38
-
-
84919754551
-
A non-radioactive method for small RNA detection by northern blotting
-
Huang Q, Mao Z, Li S, Hu J, Zhu Y (2014) A non-radioactive method for small RNA detection by northern blotting. Rice (N Y) 7(1):26.
-
(2014)
Rice (N Y)
, vol.7
, Issue.1
, pp. 26
-
-
Huang, Q.1
Mao, Z.2
Li, S.3
Hu, J.4
Zhu, Y.5
-
39
-
-
0001483073
-
BAC library constructed to the rice cultivar "Minghui 63" for cloning gene of agronomic importance
-
Peng K, Zhang H, Zhang Q (1998) BAC library constructed to the rice cultivar "Minghui 63" for cloning gene of agronomic importance. Acta Bot Sin 40(12):1108-1114.
-
(1998)
Acta Bot Sin
, vol.40
, Issue.12
, pp. 1108-1114
-
-
Peng, K.1
Zhang, H.2
Zhang, Q.3
-
40
-
-
34548040665
-
Mitogen-activated protein kinase OsMPK6 negatively regulates rice disease resistance to bacterial pathogens
-
Yuan B, Shen X, Li X, Xu C, Wang S (2007) Mitogen-activated protein kinase OsMPK6 negatively regulates rice disease resistance to bacterial pathogens. Planta 226(4):953-960.
-
(2007)
Planta
, vol.226
, Issue.4
, pp. 953-960
-
-
Yuan, B.1
Shen, X.2
Li, X.3
Xu, C.4
Wang, S.5
-
41
-
-
67349135788
-
Over-expression of aspartate aminotransferase genes in rice resulted in altered nitrogen metabolism and increased amino acid content in seeds
-
Zhou Y, et al. (2009) Over-expression of aspartate aminotransferase genes in rice resulted in altered nitrogen metabolism and increased amino acid content in seeds. Theor Appl Genet 118(7):1381-1390.
-
(2009)
Theor Appl Genet
, vol.118
, Issue.7
, pp. 1381-1390
-
-
Zhou, Y.1
-
42
-
-
34247353776
-
OsWRKY13 mediates rice disease resistance by regulating defenserelated genes in salicylate- and jasmonate-dependent signaling
-
Qiu D, et al. (2007) OsWRKY13 mediates rice disease resistance by regulating defenserelated genes in salicylate- and jasmonate-dependent signaling. Mol Plant Microbe Interact 20(5):492-499.
-
(2007)
Mol Plant Microbe Interact
, vol.20
, Issue.5
, pp. 492-499
-
-
Qiu, D.1
-
43
-
-
12844274605
-
Optimising the tissue culture conditions for high efficiency transformation of indica rice
-
Lin YJ, Zhang Q (2005) Optimising the tissue culture conditions for high efficiency transformation of indica rice. Plant Cell Rep 23(8):540-547.
-
(2005)
Plant Cell Rep
, vol.23
, Issue.8
, pp. 540-547
-
-
Lin, Y.J.1
Zhang, Q.2
-
44
-
-
17344392308
-
A new mathematical model for relative quantification in real-time RT-PCR
-
Pfaffl MW (2001) A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res 29(9):e45.
-
(2001)
Nucleic Acids Res
, vol.29
, Issue.9
, pp. e45
-
-
Pfaffl, M.W.1
|