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Volumn 5, Issue 6, 2012, Pages 1210-1216

RNA-directed DNA methylation is involved in regulating photoperiod- sensitive male sterility in rice

Author keywords

epigenetics; hybrid rice; LDMAR; Oryza sativa; Psi ; siRNA

Indexed keywords


EID: 84870575059     PISSN: 16742052     EISSN: 17529867     Source Type: Journal    
DOI: 10.1093/mp/sss095     Document Type: Article
Times cited : (130)

References (39)
  • 1
    • 77957153139 scopus 로고    scopus 로고
    • Small RNAs are on the move
    • Chitwood, D.H., and Timmermans, M.C. (2010). Small RNAs are on the move. Nature. 467, 415-419.
    • (2010) Nature. , vol.467 , pp. 415-419
    • Chitwood, D.H.1    Timmermans, M.C.2
  • 3
    • 32944461742 scopus 로고    scopus 로고
    • Transcriptional gene silencing as a tool for uncovering gene function in maize
    • DOI 10.1111/j.1365-313X.2005.02492.x
    • Cigan, A.M., Unger-Wallace, E., and Haug-Collet, K. (2005). Transcriptional gene silencing as a tool for uncovering gene function in maize. Plant J. 43, 929-940. (Pubitemid 43922155)
    • (2005) Plant Journal , vol.43 , Issue.6 , pp. 929-940
    • Mark Cigan, A.1    Unger-Wallace, E.2    Haug-Collet, K.3
  • 4
    • 84863115947 scopus 로고    scopus 로고
    • A long noncoding RNA regulates photoperiod- sensitive male sterility, an essential component of hybrid rice
    • Ding, J., et al. (2012). A long noncoding RNA regulates photoperiod- sensitive male sterility, an essential component of hybrid rice. Proc. Natl Acad. Sci. U S A. 109, 2654-2659.
    • (2012) Proc. Natl Acad. Sci. U S A. , vol.109 , pp. 2654-2659
    • Ding, J.1
  • 5
    • 0032545933 scopus 로고    scopus 로고
    • Potent and specific genetic interference by double-stranded RNA in caenorhabditis elegans
    • DOI 10.1038/35888
    • Fire, A., Xu, S., Montgomery, M.K., Kostas, S.A., Driver, S.E., and Mello, C.C. (1998). Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature. 391, 806-811. (Pubitemid 28099681)
    • (1998) Nature , vol.391 , Issue.6669 , pp. 806-811
    • Fire, A.1    Xu, S.2    Montgomery, M.K.3    Kostas, S.A.4    Driver, S.E.5    Mello, C.C.6
  • 6
    • 67149086996 scopus 로고    scopus 로고
    • Extensive demethylation of repetitive elements during seed development underlies gene imprinting
    • Gehring, M., Bubb, K.L., and Henikoff, S. (2009). Extensive demethylation of repetitive elements during seed development underlies gene imprinting. Science. 324, 1447-1451.
    • (2009) Science. , vol.324 , pp. 1447-1451
    • Gehring, M.1    Bubb, K.L.2    Henikoff, S.3
  • 7
    • 33645572881 scopus 로고    scopus 로고
    • Two recessive genes controlling thermophotoperiod-sensitive male sterility in wheat
    • Guo, R., Sun, D., Tan, Z., Rong, D., and Li, C. (2006). Two recessive genes controlling thermophotoperiod-sensitive male sterility in wheat. Theor. Appl. Genet. 112, 1271-1276.
    • (2006) Theor. Appl. Genet. , vol.112 , pp. 1271-1276
    • Guo, R.1    Sun, D.2    Tan, Z.3    Rong, D.4    Li, C.5
  • 8
    • 0033615491 scopus 로고    scopus 로고
    • A species of small antisense RNA in posttranscriptional gene silencing in plants
    • Hamilton, A.J., and Baulcombe, D.C. (1999). A species of small antisense RNA in posttranscriptional gene silencing in plants. Science. 286, 950-952.
    • (1999) Science. , vol.286 , pp. 950-952
    • Hamilton, A.J.1    Baulcombe, D.C.2
  • 9
    • 79952535972 scopus 로고    scopus 로고
    • Regulation and function of DNA methylation in plants and animals
    • He, X., Chen, T., and Zhu, J. (2011). Regulation and function of DNA methylation in plants and animals. Cell Res. 21, 442-465.
    • (2011) Cell Res. , vol.21 , pp. 442-465
    • He, X.1    Chen, T.2    Zhu, J.3
  • 10
    • 33646540444 scopus 로고    scopus 로고
    • Efficiency of transcriptional gene silencing of GBSSI in potato depends on the promoter region that is used in an inverted repeat
    • DOI 10.1007/s00438-006-0101-4
    • Heilersig, B.H., Loonen, A.E., Janssen, E.M., Wolters, A.M., and Visser, R.G. (2006). Efficiency of transcriptional gene silencing of GBSSI in potato depends on the promoter region that is used in an inverted repeat. Mol. Genet. Genomics. 275, 437-449. (Pubitemid 43725261)
    • (2006) Molecular Genetics and Genomics , vol.275 , Issue.5 , pp. 437-449
    • Heilersig, B.H.J.B.1    Loonen, A.E.H.M.2    Janssen, E.M.3    Wolters, A.-M.A.4    Visser, R.G.F.5
  • 11
    • 14844295120 scopus 로고    scopus 로고
    • RNA polymerase IV directs silencing of endogenous DNA
    • DOI 10.1126/science.1106910
    • Herr, A.J., Jensen, M.B., Dalmay, T., and Baulcombe, D.C. (2005). RNA polymerase IV directs silencing of endogenous DNA. Science. 308, 118-120. (Pubitemid 40471011)
    • (2005) Science , vol.308 , Issue.5718 , pp. 118-120
    • Herr, A.J.1    Jensen, M.B.2    Dalmay, T.3    Baulcombe, D.C.4
  • 12
    • 67149119197 scopus 로고    scopus 로고
    • Genome-wide demethylation of Arabidopsis endosperm
    • Hsieh, T.F., Ibarra, C.A., and Silva, P. (2009). Genome-wide demethylation of Arabidopsis endosperm. Science. 324, 1451-1454.
    • (2009) Science. , vol.324 , pp. 1451-1454
    • Hsieh, T.F.1    Ibarra, C.A.2    Silva, P.3
  • 13
    • 79953746026 scopus 로고    scopus 로고
    • An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress
    • Ito, H., Gaubert, H., Bucher, E., Mirouze, M., Vaillant, I., and Paszkowski, J. (2011). An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress. Nature. 472, 115-119.
    • (2011) Nature. , vol.472 , pp. 115-119
    • Ito, H.1    Gaubert, H.2    Bucher, E.3    Mirouze, M.4    Vaillant, I.5    Paszkowski, J.6
  • 15
    • 0033288597 scopus 로고    scopus 로고
    • Molecular paleontology of transposable elements from Arabidopsis thaliana
    • Kapitonov, V.V., and Jurka, J. (1999). Molecular paleontology of transposable elements from Arabidopsis thaliana. Genetica. 107, 27-37. (Pubitemid 129574948)
    • (1999) Genetica , vol.107 , Issue.1-3 , pp. 27-37
    • Kapitonov, V.V.1    Jurka, J.2
  • 16
    • 77249170184 scopus 로고    scopus 로고
    • Establishing, maintaining and modifying DNA methylation patterns in plants and animals
    • Law, J.A., and Jacobsen, S.E. (2010). Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat. Rev. Genet. 11, 204-220.
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 204-220
    • Law, J.A.1    Jacobsen, S.E.2
  • 17
    • 0034930257 scopus 로고    scopus 로고
    • Separation of the two-locus inheritance of photoperiod sensitive genic male sterility in rice and precise mapping the pms3 locus
    • DOI 10.1023/A:1017570025805
    • Li, X., Lu, Q., Wang, F., Xu, C., and Zhang, Q. (2001). Separation of the two-locus inheritance of photoperiod-sensitive genic male sterility in rice and precisely mapping the pms3 locus. Euphytica. 119, 343-348. (Pubitemid 32635668)
    • (2001) Euphytica , vol.119 , Issue.3 , pp. 343-348
    • Li, X.1    Lu, Q.2    Wang, F.3    Xu, C.4    Zhang, Q.5
  • 18
    • 12844274605 scopus 로고    scopus 로고
    • Optimising the tissue culture conditions for high efficiency transformation of indica rice
    • DOI 10.1007/s00299-004-0843-6
    • Lin, Y., and Zhang, Q. (2005). Optimising the tissue culture conditions for high efficiency transformation of indica rice. Plant Cell Rep. 23, 540-547. (Pubitemid 40167479)
    • (2005) Plant Cell Reports , vol.23 , Issue.8 , pp. 540-547
    • Lin, Y.J.1    Zhang, Q.2
  • 19
    • 0035710746 scopus 로고    scopus 로고
    • -ΔΔCT method
    • DOI 10.1006/meth.2001.1262
    • Livak, K.J., and Schmittgen, T.D. (2001). Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods. 25, 402-408. (Pubitemid 34164012)
    • (2001) Methods , vol.25 , Issue.4 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 20
    • 23044456199 scopus 로고    scopus 로고
    • Localization of pms3, a gene for photoperiod-sensitive genic male sterility, to a 28.4-kb DNA fragment
    • DOI 10.1007/s00438-005-1155-4
    • Lu, Q., Li, X., Guo, D., Xu, C., and Zhang, Q. (2005). Localization of pms3, a gene for photoperiod-sensitive genic male sterility, to a 28.4-kb DNA fragment. Mol. Genet. Genomics. 273, 507-511. (Pubitemid 41073971)
    • (2005) Molecular Genetics and Genomics , vol.273 , Issue.6 , pp. 507-511
    • Lu, Q.1    Li, X.H.2    Guo, D.3    Xu, C.G.4    Zhang, Q.5
  • 21
    • 34848904239 scopus 로고    scopus 로고
    • Targets of RNA-directed DNA methylation
    • DOI 10.1016/j.pbi.2007.06.007, PII S1369526607000805, Cell Signalling and Gene Regulation Edited by Jian-Kang Zhu and Ko Shimamoto
    • Matzke, M., Kanno, T., Huettel, B., Daxinger, L., and Matzke, A.J. (2007). Targets of RNA-directed DNA methylation. Curr. Opin. Plant Biol. 10, 512-519. (Pubitemid 47503875)
    • (2007) Current Opinion in Plant Biology , vol.10 , Issue.5 , pp. 512-519
    • Matzke, M.1    Kanno, T.2    Huettel, B.3    Daxinger, L.4    Matzke, A.J.M.5
  • 22
    • 23044513238 scopus 로고    scopus 로고
    • Pms3 is the locus causing the original photoperiod-sensitive male sterility mutation of 'Nongken 58S'
    • Mei, M., Chen, L., Zhang, Z., Li, Z., Xu, C., and Zhang, Q. (1999a). pms3 is the locus causing the original photoperiod-sensitive male sterility mutation of 'Nongken 58S'. Sci. China C Life Sci. 42, 316-322.
    • (1999) Sci. China C Life Sci. , vol.42 , pp. 316-322
    • Mei, M.1    Chen, L.2    Zhang, Z.3    Li, Z.4    Xu, C.5    Zhang, Q.6
  • 23
    • 0033370181 scopus 로고    scopus 로고
    • Mapping and genetic analysis of the genes for photoperiod-sensitive genic male sterility in rice using the original mutant Nongken 58S
    • Mei, M., Dai, X., Xu, C., and Zhang, Q. (1999b). Mapping and genetic analysis of the genes for photoperiod-sensitive genic sterility in rice using the original mutant Nongken 58S. Crop Sci. 39, 1711-1715. (Pubitemid 30061431)
    • (1999) Crop Science , vol.39 , Issue.6 , pp. 1711-1715
    • Mei, M.H.1    Dai, X.K.2    Xu, C.G.3    Zhang, Q.4
  • 24
    • 0034596989 scopus 로고    scopus 로고
    • Transcriptional silencing and promoter methylation triggered by double-stranded RNA
    • Mette, M.F., Aufsatz, W., van der Winden, J., Matzke, M.A., and Matzke, A.J. (2009). Transcriptional silencing and promoter methylation triggered by double-stranded RNA. EMBO J. 19, 5194-5201.
    • (2009) EMBO J. , vol.19 , pp. 5194-5201
    • Mette, M.F.1    Aufsatz, W.2    Van Der Winden, J.3    Matzke, M.A.4    Matzke, A.J.5
  • 25
    • 67650461957 scopus 로고    scopus 로고
    • Uniparental expression of PolIV-dependent siRNAs in developing endosperm of Arabidopsis
    • Mosher, R.A., Melnyk, C.W., Kelly, K.A., Dunn, R.M., Studholme, D.J., and Baulcombe, D.C. (2009). Uniparental expression of PolIV-dependent siRNAs in developing endosperm of Arabidopsis. Nature. 460, 283-286.
    • (2009) Nature. , vol.460 , pp. 283-286
    • Mosher, R.A.1    Melnyk, C.W.2    Kelly, K.A.3    Dunn, R.M.4    Studholme, D.J.5    Baulcombe, D.C.6
  • 26
    • 33845866362 scopus 로고    scopus 로고
    • A single transgene locus triggers both transcriptional and post-transcriptional silencing through double-stranded RNA production
    • DOI 10.1007/s00425-006-0366-1
    • Mourrain, P., van Blokland, R., Kooter, J.M., and Vaucheret, H. (2007). A single transgene locus triggers both transcriptional and post-transcriptional silencing through double-stranded RNA production. Planta. 225, 365-379. (Pubitemid 46018195)
    • (2007) Planta , vol.225 , Issue.2 , pp. 365-379
    • Mourrain, P.1    Van Blokland, R.2    Kooter, J.M.3    Vaucheret, H.4
  • 27
    • 0001866438 scopus 로고
    • The discovery and preliminary studies of the photoperiod-sensitive recessive male sterile rice (Oryza sativa L
    • Shi, M. (1985). The discovery and preliminary studies of the photoperiod-sensitive recessive male sterile rice (Oryza sativa L. subsp. japonica). Sci. Agric. Sin. 2, 44-48.
    • (1985) Subsp. Japonica). Sci. Agric. Sin. , vol.2 , pp. 44-48
    • Shi, M.1
  • 28
    • 0034955621 scopus 로고    scopus 로고
    • Temperature and photoperiod effects on sterility in a cytoplasmic male-sterile soybean
    • Smith, M.B., Horner, H.T., and Palmer, R.G. (2001). Temperature and photoperiod effects on sterility in a cytoplasmicmale-sterile soybean. Crop Sci. 41, 702-704. (Pubitemid 32592871)
    • (2001) Crop Science , vol.41 , Issue.3 , pp. 702-704
    • Smith, M.B.1    Horner, H.T.2    Palmer, R.G.3
  • 29
    • 22144464033 scopus 로고    scopus 로고
    • Cloning and characterization of microRNAs from rice
    • DOI 10.1105/tpc.105.031682
    • Sunkar, R., Girke, T., Jain, P.K., and Zhu, J. (2005). Cloning and characterization of microRNAs from rice. Plant Cell. 17, 1397-1411. (Pubitemid 43138193)
    • (2005) Plant Cell , vol.17 , Issue.5 , pp. 1397-1411
    • Sunkar, R.1    Girke, T.2    Jain, P.K.3    Zhu, J.-K.4
  • 30
    • 1942488702 scopus 로고    scopus 로고
    • Environment-sensitive genic male sterility (EGMS) in crops
    • PII S0065211301720135
    • Virmani, S.S., and Ilyas, M.A. (2001). Environment-sensitive genic male sterility (EGMS) in crops. Adv. Agron. 72, 139-195. (Pubitemid 33804324)
    • (2001) Advances in Agronomy , vol.72 , pp. 139-195
    • Virmani, S.S.1    Ilyas-Ahmed, M.2
  • 31
    • 0033832174 scopus 로고    scopus 로고
    • RNA-directed DNA methylation
    • Wassenegger, M. (2000). RNA-directed DNA methylation. Plant Mol. Biol. 43, 203-220.
    • (2000) Plant Mol. Biol. , vol.43 , pp. 203-220
    • Wassenegger, M.1
  • 32
    • 0028031830 scopus 로고
    • RNA-directed de novo methylation of genomic sequences in plants
    • DOI 10.1016/0092-8674(94)90119-8
    • Wassenegger, M., Heimes, S., Riedel, L., and Sanger, H.L. (1994). RNA-directed de novo methylation of genomic sequences in plants. Cell. 76, 567-576. (Pubitemid 24064176)
    • (1994) Cell , vol.76 , Issue.3 , pp. 567-576
    • Wassenegger, M.1    Heimes, S.2    Riedel, L.3    Sanger, H.L.4
  • 33
    • 34250865501 scopus 로고    scopus 로고
    • Over-expression of a LEA gene in rice improves drought resistance under the field conditions
    • DOI 10.1007/s00122-007-0538-9
    • Xiao, B., Huang, Y., Tang, N., and Xiong, L. (2007). Over-expression of a LEA gene in rice improves drought resistance under the field conditions. Theor. Appl. Genet. 115, 35-46. (Pubitemid 46980424)
    • (2007) Theoretical and Applied Genetics , vol.115 , Issue.1 , pp. 35-46
    • Xiao, B.1    Huang, Y.2    Tang, N.3    Xiong, L.4
  • 34
    • 33748769519 scopus 로고    scopus 로고
    • Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice
    • DOI 10.1104/pp.106.084475
    • Xie, K., Wu, C., and Xiong, L. (2006). Genomic organization, differential expression, and interaction of SQUAMOSA promoterbinding- like transcription factors and microRNA156 in rice. Plant Physiol. 142, 280-293. (Pubitemid 44412247)
    • (2006) Plant Physiology , vol.142 , Issue.1 , pp. 280-293
    • Xie, K.1    Wu, C.2    Xiong, L.3
  • 35
    • 79952709637 scopus 로고    scopus 로고
    • Progress of application and breeding on two-line hybrid rice in China
    • Yang, S., Cheng, B., Shen, W., and Xia, J. (2009). Progress of application and breeding on two-line hybrid rice in China. Hybrid Rice. 24, 5-9.
    • (2009) Hybrid Rice. , vol.24 , pp. 5-9
    • Yang, S.1    Cheng, B.2    Shen, W.3    Xia, J.4
  • 36
    • 79955120337 scopus 로고    scopus 로고
    • RNA-directed DNA methylation
    • Zhang, H., and Zhu, J. (2011). RNA-directed DNA methylation. Curr. Opin. Plant Biol. 14, 142-147.
    • (2011) Curr. Opin. Plant Biol. , vol.14 , pp. 142-147
    • Zhang, H.1    Zhu, J.2
  • 37
    • 0028059292 scopus 로고
    • Using bulked extremes and recessive class to map genes for photoperiod-sensitive genic male sterility in rice
    • Zhang, Q., Shen, B., Dai, X., Mei, M., Saghai Maroof, M.A., and Li, Z. (1994). Using bulked extremes and recessive class to map genes for photoperiod-sensitive genic male sterility in rice. Proc. Natl Acad. Sci. U S A. 91, 8675-8679.
    • (1994) Proc. Natl Acad. Sci. U S A. , vol.91 , pp. 8675-8679
    • Zhang, Q.1    Shen, B.2    Dai, X.3    Mei, M.4    Saghai Maroof, M.A.5    Li, Z.6
  • 38
    • 0003225428 scopus 로고
    • The influence of photoperiod on pollenfertility change of Hubei photoperiod-sensitive genic male sterile rice
    • Zhang, Z., and Yuan, S. (1987). The influence of photoperiod on pollenfertility change of Hubei photoperiod-sensitive genic male sterile rice. Chin. J. Rice Sci. 1, 137-143.
    • (1987) Chin. J. Rice Sci. , vol.1 , pp. 137-143
    • Zhang, Z.1    Yuan, S.2
  • 39
    • 84862777808 scopus 로고    scopus 로고
    • Photoperiod- and thermo-sensitive genic male sterility in rice are caused by a point mutation in a novel noncoding RNA that produces a small RNA
    • Zhou, H., et al. (2012). Photoperiod- and thermo-sensitive genic male sterility in rice are caused by a point mutation in a novel noncoding RNA that produces a small RNA. Cell Res. 22, 649-660.
    • (2012) Cell Res. , vol.22 , pp. 649-660
    • Zhou, H.1


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