Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer

GigaScience

Volumn 5, Issue 1, 2016, Pages

  Benítez Páez, Alfonso ^a   Portune, Kevin J ^a   Sanz, Yolanda ^a  

^a INSTITUTO DE AGROQUÍMICA Y TECNOLOGÍA DE ALIMENTOS CSIC   (Spain)

Author keywords

16S rDNA amplicon sequencing; Long read sequencing; Microbial diversity; MinION; Nanopore sequencer

Indexed keywords

RNA 16S; BACTERIAL DNA; RIBOSOME DNA;

16S RRNA GENE; ACCURACY; AMPLICON; ARTICLE; CONSENSUS SEQUENCE; CONTROLLED STUDY; GENE SEQUENCE; GENETIC ANALYZER; INTERMETHOD COMPARISON; MICROBIAL DIVERSITY; NANOPORE; NONHUMAN; POLYMERASE CHAIN REACTION; POPULATION ABUNDANCE; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SPECIES DISTRIBUTION; BACTERIUM; BACTERIUM IDENTIFICATION; CHEMISTRY; CLASSIFICATION; DNA SEQUENCE; GENETICS; NUCLEIC ACID AMPLIFICATION; PROCEDURES; REPRODUCIBILITY; SPECIES DIFFERENCE;

BACTERIA; BACTERIAL TYPING TECHNIQUES; DNA, BACTERIAL; DNA, RIBOSOMAL; NANOPORES; NUCLEIC ACID AMPLIFICATION TECHNIQUES; REPRODUCIBILITY OF RESULTS; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY;

EID: 85006184217     PISSN: None     EISSN: 2047217X     Source Type: Journal    
DOI: 10.1186/s13742-016-0111-z     Document Type: Article

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