MinION nanopore sequencing identifies the position and structure of a bacterial antibiotic resistance island

Nature Biotechnology

Volumn 33, Issue 3, 2015, Pages 296-302

  Ashton, Philip M ^a   Nair, Satheesh ^a   Dallman, Tim ^a   Rubino, Salvatore ^b,c   Rabsch, Wolfgang ^d   Mwaigwisya, Solomon ^e   Wain, John ^e   O'Grady, Justin ^e  

^a PUBLIC HEALTH ENGLAND   (United Kingdom)

^b UNIVERSITY OF SASSARI   (Italy)

^c KING FAISAL SPECIALIST HOSPITAL AND RESEARCH CENTER   (Saudi Arabia)

^d ROBERT KOCH INSTITUTE   (Germany)

^e UNIVERSITY OF EAST ANGLIA   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTICS; CHROMOSOMES; GENES; SALMONELLA; SCAFFOLDS;

ANTIBIOTIC RESISTANCE; ANTIBIOTIC RESISTANCE GENES; BACTERIAL ANTIBIOTIC RESISTANCE; BACTERIAL PATHOGENS; EPIDEMIC SPREAD; HIGH-THROUGHPUT SEQUENCING; INSERTION SEQUENCES; SALMONELLA TYPHI;

NANOPORES;

ACCURACY; BACTERIAL ANTIBIOTIC RESISTANCE ISLAND; BACTERIAL GENOME; BACTERIAL STRUCTURES; CHROMOSOME INSERTION; CONTROLLED STUDY; DNA BASE COMPOSITION; GENE INSERTION SEQUENCE; HAPLOTYPE; INDEL MUTATION; INVERTED REPEAT; LETTER; NANOPORE; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHI; TRANSPOSON; ANTIBIOTIC RESISTANCE; BACTERIAL CHROMOSOME; CPG ISLAND; DEVICES; GENETICS; HIGH THROUGHPUT SEQUENCING; PLASMID; PROCEDURES; SALMONELLA ENTERICA SEROVAR TYPHI;

BACTERIA (MICROORGANISMS); SALMONELLA TYPHI;

BASE COMPOSITION; CHROMOSOMES, BACTERIAL; CPG ISLANDS; DRUG RESISTANCE, BACTERIAL; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; NANOPORES; PLASMIDS; SALMONELLA TYPHI;

EID: 84924388692     PISSN: 10870156     EISSN: 15461696     Source Type: Journal    
DOI: 10.1038/nbt.3103     Document Type: Letter

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