메뉴 건너뛰기




Volumn 25, Issue 24, 2016, Pages 6214-6224

The diversity of arthropods in homes across the United States as determined by environmental DNA analyses

Author keywords

allergens; arthropod diversity; cytochrome c oxidase; DNA barcoding; insect diversity

Indexed keywords

ALLERGEN; DNA;

EID: 85006091092     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/mec.13900     Document Type: Article
Times cited : (41)

References (52)
  • 1
    • 79251535615 scopus 로고    scopus 로고
    • Insects in confined swine operations carry a large antibiotic resistant and potentially virulent enterococcal community
    • Ahmad A, Ghosh A, Schal C, Zurek L (2011) Insects in confined swine operations carry a large antibiotic resistant and potentially virulent enterococcal community. BMC Microbiology, 11, 23.
    • (2011) BMC Microbiology , vol.11 , pp. 23
    • Ahmad, A.1    Ghosh, A.2    Schal, C.3    Zurek, L.4
  • 2
    • 0036006837 scopus 로고    scopus 로고
    • Arthropod allergens and human health
    • Arlian LG (2002) Arthropod allergens and human health. Annual Review Entomology, 47, 395–433.
    • (2002) Annual Review Entomology , vol.47 , pp. 395-433
    • Arlian, L.G.1
  • 5
    • 84954402041 scopus 로고    scopus 로고
    • The ecology of environmental DNA and implications for conservation genetics
    • Barnes MA, Turner CR (2016) The ecology of environmental DNA and implications for conservation genetics. Conservation Genetics, 17, 1–17.
    • (2016) Conservation Genetics , vol.17 , pp. 1-17
    • Barnes, M.A.1    Turner, C.R.2
  • 6
    • 84955622159 scopus 로고    scopus 로고
    • Arthropods of the great indoors: characterizing diversity inside urban and suburban homes
    • Bertone MA, Leong M, Bayless KM et al. (2016) Arthropods of the great indoors: characterizing diversity inside urban and suburban homes. PeerJ, 4, e1582.
    • (2016) PeerJ , vol.4
    • Bertone, M.A.1    Leong, M.2    Bayless, K.M.3
  • 7
    • 79959397022 scopus 로고    scopus 로고
    • Molecular diet analysis of two African free-tailed bats (Molossidae) using high throughput sequencing (C Lalueza-Fox, Ed.)
    • Bohmann K, Monadjem A, Lehmkuhl Noer C et al. (2011) Molecular diet analysis of two African free-tailed bats (Molossidae) using high throughput sequencing (C Lalueza-Fox, Ed.). PLoS ONE, 6, e21441.
    • (2011) PLoS ONE , vol.6
    • Bohmann, K.1    Monadjem, A.2    Lehmkuhl Noer, C.3
  • 9
    • 84904619647 scopus 로고    scopus 로고
    • Who's for dinner? High-throughput sequencing reveals bat dietary differentiation in a biodiversity hotspot where prey taxonomy is largely undescribed
    • Burgar JM, Murray DC, Craig MD et al. (2014) Who's for dinner? High-throughput sequencing reveals bat dietary differentiation in a biodiversity hotspot where prey taxonomy is largely undescribed. Molecular Ecology, 23, 3605–3617.
    • (2014) Molecular Ecology , vol.23 , pp. 3605-3617
    • Burgar, J.M.1    Murray, D.C.2    Craig, M.D.3
  • 11
    • 77952243141 scopus 로고    scopus 로고
    • QIIME allows analysis of high-throughput community sequencing data
    • Caporaso JG, Kuczynski J, Stombaugh J et al. (2010) QIIME allows analysis of high-throughput community sequencing data. Nature Methods, 7, 335–336.
    • (2010) Nature Methods , vol.7 , pp. 335-336
    • Caporaso, J.G.1    Kuczynski, J.2    Stombaugh, J.3
  • 12
    • 84907984974 scopus 로고    scopus 로고
    • Environmental metabarcodes for insects: in silico PCR reveals potential for taxonomic bias
    • Clarke LJ, Soubrier J, Weyrich LS, Cooper A (2014) Environmental metabarcodes for insects: in silico PCR reveals potential for taxonomic bias. Molecular Ecology Resources, 14, 1160–1170.
    • (2014) Molecular Ecology Resources , vol.14 , pp. 1160-1170
    • Clarke, L.J.1    Soubrier, J.2    Weyrich, L.S.3    Cooper, A.4
  • 13
    • 84955557400 scopus 로고    scopus 로고
    • A review of nuisance invader household pests of the United States
    • Cranshaw W (2011) A review of nuisance invader household pests of the United States. American Entomologist, 57, 165–169.
    • (2011) American Entomologist , vol.57 , pp. 165-169
    • Cranshaw, W.1
  • 14
    • 72949118701 scopus 로고    scopus 로고
    • Associations between species and groups of sites: indices and statistical inference
    • De Cáceres M, Legendre P (2009) Associations between species and groups of sites: indices and statistical inference. Ecology, 90, 3566–3574.
    • (2009) Ecology , vol.90 , pp. 3566-3574
    • De Cáceres, M.1    Legendre, P.2
  • 15
    • 77956631921 scopus 로고    scopus 로고
    • Improving indicator species analysis by combining groups of sites
    • De Cáceres M, Legendre P, Moretti M (2010) Improving indicator species analysis by combining groups of sites. Oikos, 119, 1674–1684.
    • (2010) Oikos , vol.119 , pp. 1674-1684
    • De Cáceres, M.1    Legendre, P.2    Moretti, M.3
  • 16
    • 62249209482 scopus 로고    scopus 로고
    • Climatic drivers of hemispheric asymmetry in global patterns of ant species richness
    • Dunn RR, Agosti D, Andersen AN et al. (2009) Climatic drivers of hemispheric asymmetry in global patterns of ant species richness. Ecology Letters, 12, 324–333.
    • (2009) Ecology Letters , vol.12 , pp. 324-333
    • Dunn, R.R.1    Agosti, D.2    Andersen, A.N.3
  • 17
    • 84884904719 scopus 로고    scopus 로고
    • UPARSE: highly accurate OTU sequences from microbial amplicon reads
    • Edgar RC (2013) UPARSE: highly accurate OTU sequences from microbial amplicon reads. Nature Methods, 10, 996–998.
    • (2013) Nature Methods , vol.10 , pp. 996-998
    • Edgar, R.C.1
  • 18
    • 84941286809 scopus 로고    scopus 로고
    • Can DNA-based ecosystem assessments quantify species abundance? Testing primer bias and biomass—sequence relationships with an innovative metabarcoding protocol (M Hajibabaei, Ed.)
    • Elbrecht V, Leese F (2015) Can DNA-based ecosystem assessments quantify species abundance? Testing primer bias and biomass—sequence relationships with an innovative metabarcoding protocol (M Hajibabaei, Ed.). PLoS ONE, 10, e0130324.
    • (2015) PLoS ONE , vol.10
    • Elbrecht, V.1    Leese, F.2
  • 19
    • 84907696747 scopus 로고    scopus 로고
    • Too big to be noticed: cryptic invasion of Asian camel crickets in North American houses
    • Epps MJ, Menninger HL, LaSala N, Dunn RR (2014) Too big to be noticed: cryptic invasion of Asian camel crickets in North American houses. PeerJ, 2, e523.
    • (2014) PeerJ , vol.2
    • Epps, M.J.1    Menninger, H.L.2    LaSala, N.3    Dunn, R.R.4
  • 22
    • 36448964353 scopus 로고
    • The aphid—an insect allergen
    • Gaillard GE (1950) The aphid—an insect allergen. Journal of Allergy, 21, 386–399.
    • (1950) Journal of Allergy , vol.21 , pp. 386-399
    • Gaillard, G.E.1
  • 23
    • 84901823211 scopus 로고    scopus 로고
    • Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics
    • Gibson J, Shokralla S, Porter TM et al. (2014) Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics. Proceedings of the National Academy of Sciences, 111, 8007–8012.
    • (2014) Proceedings of the National Academy of Sciences , vol.111 , pp. 8007-8012
    • Gibson, J.1    Shokralla, S.2    Porter, T.M.3
  • 25
    • 0034999843 scopus 로고    scopus 로고
    • The role of non-biting flies in the epidemiology of human infectious diseases
    • Graczyk TK, Knight R, Gilman RH, Cranfield MR (2001) The role of non-biting flies in the epidemiology of human infectious diseases. Microbes and Infection, 3, 231–235.
    • (2001) Microbes and Infection , vol.3 , pp. 231-235
    • Graczyk, T.K.1    Knight, R.2    Gilman, R.H.3    Cranfield, M.R.4
  • 27
    • 40149103278 scopus 로고    scopus 로고
    • Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex
    • Hamady M, Walker JJ, Harris JK, Gold NJ, Knight R (2008) Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex. Nature Methods, 5, 235–237.
    • (2008) Nature Methods , vol.5 , pp. 235-237
    • Hamady, M.1    Walker, J.J.2    Harris, J.K.3    Gold, N.J.4    Knight, R.5
  • 29
    • 79958088243 scopus 로고    scopus 로고
    • Global diversity in light of climate change: the case of ants: global diversity of ants in light of climate change
    • Jenkins CN, Sanders NJ, Andersen AN et al. (2011) Global diversity in light of climate change: the case of ants: global diversity of ants in light of climate change. Diversity and Distributions, 17, 652–662.
    • (2011) Diversity and Distributions , vol.17 , pp. 652-662
    • Jenkins, C.N.1    Sanders, N.J.2    Andersen, A.N.3
  • 31
    • 84890960611 scopus 로고    scopus 로고
    • Life history and biology of the invasive Turkestan cockroach (Dictyoptera: Blattidae)
    • Kim T, Rust MK (2013) Life history and biology of the invasive Turkestan cockroach (Dictyoptera: Blattidae). Journal of Economic Entomology, 106, 2428–2432.
    • (2013) Journal of Economic Entomology , vol.106 , pp. 2428-2432
    • Kim, T.1    Rust, M.K.2
  • 32
    • 0038677959 scopus 로고    scopus 로고
    • United States Department of Agriculture-Agriculture Research Service research on targeted management of the Formosan subterranean termite Coptotermes formosanus Shiraki (Isoptera: Rhinotermitidae)
    • Lax AR, Osbrink WL (2003) United States Department of Agriculture-Agriculture Research Service research on targeted management of the Formosan subterranean termite Coptotermes formosanus Shiraki (Isoptera: Rhinotermitidae). Pest Management Science, 59, 788–800.
    • (2003) Pest Management Science , vol.59 , pp. 788-800
    • Lax, A.R.1    Osbrink, W.L.2
  • 33
    • 84983347803 scopus 로고    scopus 로고
    • Exoskeletons and economics: indoor arthropod diversity increases in affluent neighbourhoods
    • Leong M, Bertone MA, Bayless KM, Dunn RR, Trautwein MD (2016) Exoskeletons and economics: indoor arthropod diversity increases in affluent neighbourhoods. Biology Letters, 12, 20160322.
    • (2016) Biology Letters , vol.12 , pp. 20160322
    • Leong, M.1    Bertone, M.A.2    Bayless, K.M.3    Dunn, R.R.4    Trautwein, M.D.5
  • 34
    • 84930867003 scopus 로고    scopus 로고
    • Mosquito attraction: crucial role of carbon dioxide in formulation of a five-component blend of human-derived volatiles
    • van Loon JJA, Smallegange RC, Bukovinszkiné-Kiss G et al. (2015) Mosquito attraction: crucial role of carbon dioxide in formulation of a five-component blend of human-derived volatiles. Journal of Chemical Ecology, 41, 567–573.
    • (2015) Journal of Chemical Ecology , vol.41 , pp. 567-573
    • van Loon, J.J.A.1    Smallegange, R.C.2    Bukovinszkiné-Kiss, G.3
  • 35
    • 44449171351 scopus 로고    scopus 로고
    • A universal DNA mini-barcode for biodiversity analysis
    • Meusnier I, Singer GA, Landry J-F et al. (2008) A universal DNA mini-barcode for biodiversity analysis. BMC Genomics, 9, 214.
    • (2008) BMC Genomics , vol.9 , pp. 214
    • Meusnier, I.1    Singer, G.A.2    Landry, J.-F.3
  • 36
    • 35348931194 scopus 로고    scopus 로고
    • National surveillance for asthma—United States, 1980–2004
    • Moorman JE, Rudd RA, Johnson CA et al. (2007) National surveillance for asthma—United States, 1980–2004. MMWR Surveillance Summaries, 56(1–14), 18–54.
    • (2007) MMWR Surveillance Summaries , vol.56 , Issue.1-14 , pp. 18-54
    • Moorman, J.E.1    Rudd, R.A.2    Johnson, C.A.3
  • 37
    • 0034963557 scopus 로고    scopus 로고
    • Regulatory action criteria for filth and other extraneous materials V. Strategy for evaluating hazardous and nonhazardous filth
    • Olsen AR, Gecan JS, Ziobro GC, Bryce JR (2001) Regulatory action criteria for filth and other extraneous materials V. Strategy for evaluating hazardous and nonhazardous filth. Regulatory Toxicology and Pharmacology, 33, 363–392.
    • (2001) Regulatory Toxicology and Pharmacology , vol.33 , pp. 363-392
    • Olsen, A.R.1    Gecan, J.S.2    Ziobro, G.C.3    Bryce, J.R.4
  • 38
    • 0037190086 scopus 로고    scopus 로고
    • Exposure to dogs and cats in the first year of life and risk of allergic sensitization at 6 to 7 years of age
    • Ownby DR (2002) Exposure to dogs and cats in the first year of life and risk of allergic sensitization at 6 to 7 years of age. JAMA, 288, 963–972.
    • (2002) JAMA , vol.288 , pp. 963-972
    • Ownby, D.R.1
  • 39
    • 84890230480 scopus 로고    scopus 로고
    • A pragmatic approach to the analysis of diets of generalist predators: the use of next-generation sequencing with no blocking primers
    • Pinol J, San Andres V, Clare EL, Mir G, Symondson WOC (2014) A pragmatic approach to the analysis of diets of generalist predators: the use of next-generation sequencing with no blocking primers. Molecular Ecology Resources, 14, 18-26.
    • (2014) Molecular Ecology Resources , vol.14 , pp. 18-26
    • Pinol, J.1    San Andres, V.2    Clare, E.L.3    Mir, G.4    Symondson, W.O.C.5
  • 40
    • 84905982041 scopus 로고    scopus 로고
    • Rapid and accurate taxonomic classification of insect (class Insecta) cytochrome c oxidase subunit 1 (COI) DNA barcode sequences using a naïve Bayesian classifier
    • Porter TM, Gibson JF, Shokralla S et al. (2014) Rapid and accurate taxonomic classification of insect (class Insecta) cytochrome c oxidase subunit 1 (COI) DNA barcode sequences using a naïve Bayesian classifier. Molecular Ecology Resources, 14, 929–942.
    • (2014) Molecular Ecology Resources , vol.14 , pp. 929-942
    • Porter, T.M.1    Gibson, J.F.2    Shokralla, S.3
  • 41
    • 84888613167 scopus 로고    scopus 로고
    • Environmental assessment and exposure control of dust mites: a practice parameter
    • Portnoy J, Miller JD, Williams PB et al. (2013) Environmental assessment and exposure control of dust mites: a practice parameter. Annals of Allergy, Asthma & Immunology, 111, 465–507.
    • (2013) Annals of Allergy, Asthma & Immunology , vol.111 , pp. 465-507
    • Portnoy, J.1    Miller, J.D.2    Williams, P.B.3
  • 43
    • 34248149943 scopus 로고    scopus 로고
    • BARCODING: bold: the barcode of life data system
    • Ratnasingham S, Hebert PDN (2007) BARCODING: bold: the barcode of life data system (http://www.barcodinglife.org). Molecular Ecology Notes, 7, 355–364.
    • (2007) Molecular Ecology Notes , vol.7 , pp. 355-364
    • Ratnasingham, S.1    Hebert, P.D.N.2
  • 44
    • 0025693086 scopus 로고
    • Integrated suppression of synanthropic cockroaches
    • Schal C, Hamilton RL (1990) Integrated suppression of synanthropic cockroaches. Annual Review of Entomology, 35, 521–551.
    • (1990) Annual Review of Entomology , vol.35 , pp. 521-551
    • Schal, C.1    Hamilton, R.L.2
  • 49
    • 34548293679 scopus 로고    scopus 로고
    • Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
    • Wang Q, Garrity GM, Tiedje JM, Cole JR (2007) Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Applied and Environmental Microbiology, 73, 5261–5267.
    • (2007) Applied and Environmental Microbiology , vol.73 , pp. 5261-5267
    • Wang, Q.1    Garrity, G.M.2    Tiedje, J.M.3    Cole, J.R.4
  • 50
    • 84866642478 scopus 로고    scopus 로고
    • Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring: biodiversity soup
    • Yu DW, Ji Y, Emerson BC et al. (2012) Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring: biodiversity soup. Methods in Ecology and Evolution, 3, 613–623.
    • (2012) Methods in Ecology and Evolution , vol.3 , pp. 613-623
    • Yu, D.W.1    Ji, Y.2    Emerson, B.C.3
  • 52
    • 84901305742 scopus 로고    scopus 로고
    • Insects represent a link between food animal farms and the urban environment for antibiotic resistance traits
    • Zurek L, Ghosh A (2014) Insects represent a link between food animal farms and the urban environment for antibiotic resistance traits. Applied and Environmental Microbiology, 80, 3562–3567.
    • (2014) Applied and Environmental Microbiology , vol.80 , pp. 3562-3567
    • Zurek, L.1    Ghosh, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.