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1
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84916598431
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Bioinformatics for cancer immunotherapy target discovery
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1 Olsen, L.R., Campos, B., Barnkob, M.S., Winther, O., Brusic, V., Andersen, M.H., Bioinformatics for cancer immunotherapy target discovery. Cancer Immunol Immunother 63 (2014), 1235–1249.
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Olsen, L.R.1
Campos, B.2
Barnkob, M.S.3
Winther, O.4
Brusic, V.5
Andersen, M.H.6
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2
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0028965522
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Chronic relapsing experimental autoimmune encephalomyelitis with a delayed onset and an atypical clinical course, induced in PL/J mice by myelin oligodendrocyte glycoprotein (MOG)-derived peptide: preliminary analysis of MOG T cell epitopes
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2 Kerlero de Rosbo, N., Mendel, I., Ben-Nun, A., Chronic relapsing experimental autoimmune encephalomyelitis with a delayed onset and an atypical clinical course, induced in PL/J mice by myelin oligodendrocyte glycoprotein (MOG)-derived peptide: preliminary analysis of MOG T cell epitopes. Eur J Immunol 25 (1995), 985–993.
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Eur J Immunol
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Kerlero de Rosbo, N.1
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Ben-Nun, A.3
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3
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4644324025
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Cancer immunotherapy: moving beyond current vaccines
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3 Rosenberg, S.A., Yang, J.C., Restifo, N.P., Cancer immunotherapy: moving beyond current vaccines. Nat Med 10 (2004), 909–915.
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Nat Med
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Rosenberg, S.A.1
Yang, J.C.2
Restifo, N.P.3
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4
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84960372950
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Vaccines for established cancer: overcoming the challenges posed by immune evasion
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This review summarizes how tumors can escape from anti-tumor T cells.
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4• van der Burg, S.H., Arens, R., Ossendorp, F., van Hall, T., Melief, C.J., Vaccines for established cancer: overcoming the challenges posed by immune evasion. Nat Rev Cancer 16 (2016), 219–233 This review summarizes how tumors can escape from anti-tumor T cells.
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(2016)
Nat Rev Cancer
, vol.16
, pp. 219-233
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van der Burg, S.H.1
Arens, R.2
Ossendorp, F.3
van Hall, T.4
Melief, C.J.5
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5
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85016878370
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Designing therapeutic cancer vaccines by mimicking viral infections
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This review summarized that the use of correct adjuvants such as poly-IC, which mimic viral infections, with the appropriate antigen selection can induce a huge T cell responses against tumors.
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5•• Sultan, H., Fesenkova, V.I., Addis, D., Fan, A.E., Kumai, T., Wu, J., Salazar, A.M., Celis, E., Designing therapeutic cancer vaccines by mimicking viral infections. Cancer Immunol Immunother, 2016 This review summarized that the use of correct adjuvants such as poly-IC, which mimic viral infections, with the appropriate antigen selection can induce a huge T cell responses against tumors.
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(2016)
Cancer Immunol Immunother
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Sultan, H.1
Fesenkova, V.I.2
Addis, D.3
Fan, A.E.4
Kumai, T.5
Wu, J.6
Salazar, A.M.7
Celis, E.8
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6
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84255197842
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Cancer immunotherapy comes of age
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6 Mellman, I., Coukos, G., Dranoff, G., Cancer immunotherapy comes of age. Nature 480 (2011), 480–489.
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(2011)
Nature
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, pp. 480-489
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Mellman, I.1
Coukos, G.2
Dranoff, G.3
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7
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70350772293
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Vaccination against HPV-16 oncoproteins for vulvar intraepithelial neoplasia
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This study demostrated that a vaccine with HPV-derived long peptides could cure intraepithelial neoplasia.
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7• Kenter, G.G., Welters, M.J., Valentijn, A.R., Lowik, M.J., Berends-van der Meer, D.M., Vloon, A.P., Essahsah, F., Fathers, L.M., Offringa, R., Drijfhout, J.W., et al. Vaccination against HPV-16 oncoproteins for vulvar intraepithelial neoplasia. N Engl J Med 361 (2009), 1838–1847 This study demostrated that a vaccine with HPV-derived long peptides could cure intraepithelial neoplasia.
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(2009)
N Engl J Med
, vol.361
, pp. 1838-1847
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Kenter, G.G.1
Welters, M.J.2
Valentijn, A.R.3
Lowik, M.J.4
Berends-van der Meer, D.M.5
Vloon, A.P.6
Essahsah, F.7
Fathers, L.M.8
Offringa, R.9
Drijfhout, J.W.10
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8
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84875689800
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HPV16 synthetic long peptide (HPV16-SLP) vaccination therapy of patients with advanced or recurrent HPV16-induced gynecological carcinoma, a phase II trial
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8 van Poelgeest, M.I., Welters, M.J., van Esch, E.M., Stynenbosch, L.F., Kerpershoek, G., van Persijn van Meerten, E.L., van den Hende, M., Lowik, M.J., Berends-van der Meer, D.M., Fathers, L.M., et al. HPV16 synthetic long peptide (HPV16-SLP) vaccination therapy of patients with advanced or recurrent HPV16-induced gynecological carcinoma, a phase II trial. J Transl Med, 11, 2013, 88.
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(2013)
J Transl Med
, vol.11
, pp. 88
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van Poelgeest, M.I.1
Welters, M.J.2
van Esch, E.M.3
Stynenbosch, L.F.4
Kerpershoek, G.5
van Persijn van Meerten, E.L.6
van den Hende, M.7
Lowik, M.J.8
Berends-van der Meer, D.M.9
Fathers, L.M.10
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10
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84947984588
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Convergence of acquired mutations and alternative splicing of CD19 enables resistance to CART-19 immunotherapy
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10 Sotillo, E., Barrett, D.M., Black, K.L., Bagashev, A., Oldridge, D., Wu, G., Sussman, R., Lanauze, C., Ruella, M., Gazzara, M.R., et al. Convergence of acquired mutations and alternative splicing of CD19 enables resistance to CART-19 immunotherapy. Cancer Discov 5 (2015), 1282–1295.
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(2015)
Cancer Discov
, vol.5
, pp. 1282-1295
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Sotillo, E.1
Barrett, D.M.2
Black, K.L.3
Bagashev, A.4
Oldridge, D.5
Wu, G.6
Sussman, R.7
Lanauze, C.8
Ruella, M.9
Gazzara, M.R.10
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11
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84975601425
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Eradication of large solid tumors by gene therapy with a T cell receptor targeting a single cancer-specific point mutation
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This study demonstrated that, although neo-antigen-specific T cells can eradicate tumors, antigen-negative tumor variants eventually escaped from these T cells.
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11• Leisegang, M., Engels, B., Schreiber, K., Yew, P.Y., Kiyotani, K., Idel, C., Arina, A., Duraiswamy, J., Weichselbaum, R.R., Uckert, W., et al. Eradication of large solid tumors by gene therapy with a T cell receptor targeting a single cancer-specific point mutation. Clin Cancer Res, 2015 This study demonstrated that, although neo-antigen-specific T cells can eradicate tumors, antigen-negative tumor variants eventually escaped from these T cells.
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(2015)
Clin Cancer Res
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Leisegang, M.1
Engels, B.2
Schreiber, K.3
Yew, P.Y.4
Kiyotani, K.5
Idel, C.6
Arina, A.7
Duraiswamy, J.8
Weichselbaum, R.R.9
Uckert, W.10
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12
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84877825063
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BiVax: a peptide/poly-IC subunit vaccine that mimics an acute infection elicits vast and effective anti-tumor CD8 T-cell responses
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This study demostrated that peptide vaccines with poly-IC induced robust CD8 T cell responses via the stimulation of TLR3 and MDA5, and that the amphiphilicity of the peptide and the route of administration were important determinants of the immunogenicity of peptide vaccine.
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12•• Cho, H.I., Barrios, K., Lee, Y.R., Linowski, A.K., Celis, E., BiVax: a peptide/poly-IC subunit vaccine that mimics an acute infection elicits vast and effective anti-tumor CD8 T-cell responses. Cancer Immunol Immunother 62 (2013), 787–799 This study demostrated that peptide vaccines with poly-IC induced robust CD8 T cell responses via the stimulation of TLR3 and MDA5, and that the amphiphilicity of the peptide and the route of administration were important determinants of the immunogenicity of peptide vaccine.
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(2013)
Cancer Immunol Immunother
, vol.62
, pp. 787-799
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Cho, H.I.1
Barrios, K.2
Lee, Y.R.3
Linowski, A.K.4
Celis, E.5
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13
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71549172516
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Optimized peptide vaccines eliciting extensive CD8 T-cell responses with therapeutic antitumor effects
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This study showed that the combination of a synthetic peptide, TLR ligand, and agonistic CD40 mAb induced a vast number of tumor-reactive CD8 T cells.
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13• Cho, H.I., Celis, E., Optimized peptide vaccines eliciting extensive CD8 T-cell responses with therapeutic antitumor effects. Cancer Res 69 (2009), 9012–9020 This study showed that the combination of a synthetic peptide, TLR ligand, and agonistic CD40 mAb induced a vast number of tumor-reactive CD8 T cells.
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(2009)
Cancer Res
, vol.69
, pp. 9012-9020
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Cho, H.I.1
Celis, E.2
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14
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33747041065
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CD8 T cell competition for dendritic cells in vivo is an early event in activation
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14 Willis, R.A., Kappler, J.W., Marrack, P.C., CD8 T cell competition for dendritic cells in vivo is an early event in activation. Proc Natl Acad Sci U S A 103 (2006), 12063–12068.
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(2006)
Proc Natl Acad Sci U S A
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Willis, R.A.1
Kappler, J.W.2
Marrack, P.C.3
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15
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84902127858
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IgG-mediated anaphylaxis to a synthetic long peptide vaccine containing a B cell epitope can be avoided by slow-release formulation
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This study demonstrated that long peptides that contains B cell epitopes induced severe anaphylaxis after several doses of vaccine.
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15• Quakkelaar, E.D., Fransen, M.F., van Maren, W.W., Vaneman, J., Loof, N.M., van Heiningen, S.H., Verbeek, J.S., Ossendorp, F., Melief, C.J., IgG-mediated anaphylaxis to a synthetic long peptide vaccine containing a B cell epitope can be avoided by slow-release formulation. J Immunol 192 (2014), 5813–5820 This study demonstrated that long peptides that contains B cell epitopes induced severe anaphylaxis after several doses of vaccine.
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(2014)
J Immunol
, vol.192
, pp. 5813-5820
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Quakkelaar, E.D.1
Fransen, M.F.2
van Maren, W.W.3
Vaneman, J.4
Loof, N.M.5
van Heiningen, S.H.6
Verbeek, J.S.7
Ossendorp, F.8
Melief, C.J.9
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16
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84936753180
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Supramolecular peptide vaccines: tuning adaptive immunity
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This paper discusses the immunogenicity of modified peptides. Amphiphilic peptides self-assemble to create supramolecular structures, such as nanoparticles and cylindrical micelles that become highly immunogenic.
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16• Wen, Y., Collier, J.H., Supramolecular peptide vaccines: tuning adaptive immunity. Curr Opin Immunol 35 (2015), 73–79 This paper discusses the immunogenicity of modified peptides. Amphiphilic peptides self-assemble to create supramolecular structures, such as nanoparticles and cylindrical micelles that become highly immunogenic.
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(2015)
Curr Opin Immunol
, vol.35
, pp. 73-79
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Wen, Y.1
Collier, J.H.2
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17
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38449106129
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CD8+ CTL priming by exact peptide epitopes in incomplete Freund's adjuvant induces a vanishing CTL response, whereas long peptides induce sustained CTL reactivity
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17 Bijker, M.S., van den Eeden, S.J., Franken, K.L., Melief, C.J., Offringa, R., van der Burg, S.H., CD8+ CTL priming by exact peptide epitopes in incomplete Freund's adjuvant induces a vanishing CTL response, whereas long peptides induce sustained CTL reactivity. J Immunol 179 (2007), 5033–5040.
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(2007)
J Immunol
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, pp. 5033-5040
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Bijker, M.S.1
van den Eeden, S.J.2
Franken, K.L.3
Melief, C.J.4
Offringa, R.5
van der Burg, S.H.6
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18
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84962030072
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Exome sequencing to predict neoantigens in melanoma
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This report illustrates a new approach to predict neoantigens in patients by combining whole-exosome sequencing data, mRNA microarrays, and epitope prediction algorithms. However, this approach may lead to false negative results.
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18•• Pritchard, A.L., Burel, J.G., Neller, M.A., Hayward, N.K., Lopez, J.A., Fatho, M., Lennerz, V., Wolfel, T., Schmidt, C.W., Exome sequencing to predict neoantigens in melanoma. Cancer Immunol Res 3 (2015), 992–998 This report illustrates a new approach to predict neoantigens in patients by combining whole-exosome sequencing data, mRNA microarrays, and epitope prediction algorithms. However, this approach may lead to false negative results.
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(2015)
Cancer Immunol Res
, vol.3
, pp. 992-998
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Pritchard, A.L.1
Burel, J.G.2
Neller, M.A.3
Hayward, N.K.4
Lopez, J.A.5
Fatho, M.6
Lennerz, V.7
Wolfel, T.8
Schmidt, C.W.9
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19
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84964199186
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How frequently are predicted peptides actually recognized by CD8 cells?
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19 Moldovan, I., Targoni, O., Zhang, W., Sundararaman, S., Lehmann, P.V., How frequently are predicted peptides actually recognized by CD8 cells?. Cancer Immunol Immunother, 2016.
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(2016)
Cancer Immunol Immunother
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Moldovan, I.1
Targoni, O.2
Zhang, W.3
Sundararaman, S.4
Lehmann, P.V.5
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20
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84885911628
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EGFR inhibitors augment antitumour helper T-cell responses of HER family-specific immunotherapy
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This study demonstrated that promiscuous peptides can stimulate T cell responses to a variety of HLA alleles and that EGFR inhibitors upregulate MHC expression on tumors followed by the upregulation of antitumor T cell responses.
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20• Kumai, T., Matsuda, Y., Oikawa, K., Aoki, N., Kimura, S., Harabuchi, Y., Celis, E., Kobayashi, H., EGFR inhibitors augment antitumour helper T-cell responses of HER family-specific immunotherapy. Br J Cancer 109 (2013), 2155–2166 This study demonstrated that promiscuous peptides can stimulate T cell responses to a variety of HLA alleles and that EGFR inhibitors upregulate MHC expression on tumors followed by the upregulation of antitumor T cell responses.
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(2013)
Br J Cancer
, vol.109
, pp. 2155-2166
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Kumai, T.1
Matsuda, Y.2
Oikawa, K.3
Aoki, N.4
Kimura, S.5
Harabuchi, Y.6
Celis, E.7
Kobayashi, H.8
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21
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84918529757
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MHC class I loss is a frequent mechanism of immune escape in papillary thyroid cancer that is reversed by interferon and selumetinib treatment in vitro
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21 Angell, T.E., Lechner, M.G., Jang, J.K., LoPresti, J.S., Epstein, A.L., MHC class I loss is a frequent mechanism of immune escape in papillary thyroid cancer that is reversed by interferon and selumetinib treatment in vitro. Clin Cancer Res 20 (2014), 6034–6044.
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(2014)
Clin Cancer Res
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Angell, T.E.1
Lechner, M.G.2
Jang, J.K.3
LoPresti, J.S.4
Epstein, A.L.5
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22
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84965043297
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Strategies to genetically engineer T cells for cancer immunotherapy
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22 Spear, T.T., Nagato, K., Nishimura, M.I., Strategies to genetically engineer T cells for cancer immunotherapy. Cancer Immunol Immunother, 2016.
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(2016)
Cancer Immunol Immunother
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Spear, T.T.1
Nagato, K.2
Nishimura, M.I.3
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23
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77949522803
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Tumor-reactive CD4(+) T cells develop cytotoxic activity and eradicate large established melanoma after transfer into lymphopenic hosts
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23 Quezada, S.A., Simpson, T.R., Peggs, K.S., Merghoub, T., Vider, J., Fan, X., Blasberg, R., Yagita, H., Muranski, P., Antony, P.A., et al. Tumor-reactive CD4(+) T cells develop cytotoxic activity and eradicate large established melanoma after transfer into lymphopenic hosts. J Exp Med 207 (2010), 637–650.
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(2010)
J Exp Med
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, pp. 637-650
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Quezada, S.A.1
Simpson, T.R.2
Peggs, K.S.3
Merghoub, T.4
Vider, J.5
Fan, X.6
Blasberg, R.7
Yagita, H.8
Muranski, P.9
Antony, P.A.10
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24
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84900301377
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Cancer immunotherapy based on mutation-specific CD4+ T cells in a patient with epithelial cancer
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+ T cells can mediate tumor regression in cancer patients.
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+ T cells can mediate tumor regression in cancer patients.
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(2014)
Science
, vol.344
, pp. 641-645
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Tran, E.1
Turcotte, S.2
Gros, A.3
Robbins, P.F.4
Lu, Y.C.5
Dudley, M.E.6
Wunderlich, J.R.7
Somerville, R.P.8
Hogan, K.9
Hinrichs, C.S.10
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25
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84881246114
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A randomized phase II trial of multiepitope vaccination with melanoma peptides for cytotoxic T cells and helper T cells for patients with metastatic melanoma (E1602)
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25 Slingluff, C.L. Jr., Lee, S., Zhao, F., Chianese-Bullock, K.A., Olson, W.C., Butterfield, L.H., Whiteside, T.L., Leming, P.D., Kirkwood, J.M., A randomized phase II trial of multiepitope vaccination with melanoma peptides for cytotoxic T cells and helper T cells for patients with metastatic melanoma (E1602). Clin Cancer Res 19 (2013), 4228–4238.
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(2013)
Clin Cancer Res
, vol.19
, pp. 4228-4238
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Slingluff, C.L.1
Lee, S.2
Zhao, F.3
Chianese-Bullock, K.A.4
Olson, W.C.5
Butterfield, L.H.6
Whiteside, T.L.7
Leming, P.D.8
Kirkwood, J.M.9
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26
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84940724549
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A phase I trial combining decitabine/dendritic cell vaccine targeting MAGE-A1, MAGE-A3 and NY-ESO-1 for children with relapsed or therapy-refractory neuroblastoma and sarcoma
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26 Krishnadas, D.K., Shusterman, S., Bai, F., Diller, L., Sullivan, J.E., Cheerva, A.C., George, R.E., Lucas, K.G., A phase I trial combining decitabine/dendritic cell vaccine targeting MAGE-A1, MAGE-A3 and NY-ESO-1 for children with relapsed or therapy-refractory neuroblastoma and sarcoma. Cancer Immunol Immunother 64 (2015), 1251–1260.
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Cancer Immunol Immunother
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Krishnadas, D.K.1
Shusterman, S.2
Bai, F.3
Diller, L.4
Sullivan, J.E.5
Cheerva, A.C.6
George, R.E.7
Lucas, K.G.8
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27
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84895813363
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Combination immunotherapy after ASCT for multiple myeloma using MAGE-A3/Poly-ICLC immunizations followed by adoptive transfer of vaccine-primed and costimulated autologous T cells
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27 Rapoport, A.P., Aqui, N.A., Stadtmauer, E.A., Vogl, D.T., Xu, Y.Y., Kalos, M., Cai, L., Fang, H.B., Weiss, B.M., Badros, A., et al. Combination immunotherapy after ASCT for multiple myeloma using MAGE-A3/Poly-ICLC immunizations followed by adoptive transfer of vaccine-primed and costimulated autologous T cells. Clin Cancer Res 20 (2014), 1355–1365.
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Clin Cancer Res
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Rapoport, A.P.1
Aqui, N.A.2
Stadtmauer, E.A.3
Vogl, D.T.4
Xu, Y.Y.5
Kalos, M.6
Cai, L.7
Fang, H.B.8
Weiss, B.M.9
Badros, A.10
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28
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84861906424
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HSP DNAJB8 controls tumor-initiating ability in renal cancer stem-like cells
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28 Nishizawa, S., Hirohashi, Y., Torigoe, T., Takahashi, A., Tamura, Y., Mori, T., Kanaseki, T., Kamiguchi, K., Asanuma, H., Morita, R., et al. HSP DNAJB8 controls tumor-initiating ability in renal cancer stem-like cells. Cancer Res 72 (2012), 2844–2854.
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Cancer Res
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Nishizawa, S.1
Hirohashi, Y.2
Torigoe, T.3
Takahashi, A.4
Tamura, Y.5
Mori, T.6
Kanaseki, T.7
Kamiguchi, K.8
Asanuma, H.9
Morita, R.10
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29
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84950280845
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Mutanome directed cancer immunotherapy
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29 Vormehr, M., Diken, M., Boegel, S., Kreiter, S., Tureci, O., Sahin, U., Mutanome directed cancer immunotherapy. Curr Opin Immunol 39 (2016), 14–22.
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Curr Opin Immunol
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Vormehr, M.1
Diken, M.2
Boegel, S.3
Kreiter, S.4
Tureci, O.5
Sahin, U.6
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30
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84928811341
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Mutant MHC class II epitopes drive therapeutic immune responses to cancer
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Interesting finding that the majority of mutation-derived antigens that had an antitumor effect were CD4 T cell epitopes.
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30•• Kreiter, S., Vormehr, M., van de Roemer, N., Diken, M., Lower, M., Diekmann, J., Boegel, S., Schrors, B., Vascotto, F., Castle, J.C., et al. Mutant MHC class II epitopes drive therapeutic immune responses to cancer. Nature 520 (2015), 692–696 Interesting finding that the majority of mutation-derived antigens that had an antitumor effect were CD4 T cell epitopes.
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(2015)
Nature
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, pp. 692-696
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Kreiter, S.1
Vormehr, M.2
van de Roemer, N.3
Diken, M.4
Lower, M.5
Diekmann, J.6
Boegel, S.7
Schrors, B.8
Vascotto, F.9
Castle, J.C.10
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31
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84920956731
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Predicting immunogenic tumour mutations by combining mass spectrometry and exome sequencing
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Description of a sophisticated method to identify mutation-derived CD8 T cell epitopes by combining mass spectometry and whole-exosome sequencing.
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31•• Yadav, M., Jhunjhunwala, S., Phung, Q.T., Lupardus, P., Tanguay, J., Bumbaca, S., Franci, C., Cheung, T.K., Fritsche, J., Weinschenk, T., et al. Predicting immunogenic tumour mutations by combining mass spectrometry and exome sequencing. Nature 515 (2014), 572–576 Description of a sophisticated method to identify mutation-derived CD8 T cell epitopes by combining mass spectometry and whole-exosome sequencing.
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(2014)
Nature
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, pp. 572-576
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Yadav, M.1
Jhunjhunwala, S.2
Phung, Q.T.3
Lupardus, P.4
Tanguay, J.5
Bumbaca, S.6
Franci, C.7
Cheung, T.K.8
Fritsche, J.9
Weinschenk, T.10
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32
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84857725402
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Exploiting the mutanome for tumor vaccination
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32 Castle, J.C., Kreiter, S., Diekmann, J., Lower, M., van de Roemer, N., de Graaf, J., Selmi, A., Diken, M., Boegel, S., Paret, C., et al. Exploiting the mutanome for tumor vaccination. Cancer Res 72 (2012), 1081–1091.
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Cancer Res
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Castle, J.C.1
Kreiter, S.2
Diekmann, J.3
Lower, M.4
van de Roemer, N.5
de Graaf, J.6
Selmi, A.7
Diken, M.8
Boegel, S.9
Paret, C.10
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33
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84945174963
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Analogue peptides for the immunotherapy of human acute myeloid leukemia
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33 Hofmann, S., Mead, A., Malinovskis, A., Hardwick, N.R., Guinn, B.A., Analogue peptides for the immunotherapy of human acute myeloid leukemia. Cancer Immunol Immunother 64 (2015), 1357–1367.
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Cancer Immunol Immunother
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Hofmann, S.1
Mead, A.2
Malinovskis, A.3
Hardwick, N.R.4
Guinn, B.A.5
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34
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40049085030
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N-terminal trimer extension of nominal CD8 T cell epitopes is sufficient to promote cross-presentation to cognate CD8 T cells in vivo
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Key observation that the simple extension of peptides can enhance cross-presentation of CD8 epitopes by DCs.
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