-
1
-
-
84891789442
-
Potential influence of the microbiome on infertility and assisted reproductive technology
-
1 Sirota, I., Zarek, S.M., Segars, J.H., Potential influence of the microbiome on infertility and assisted reproductive technology. Semin Reprod Med 32 (2014), 35–42.
-
(2014)
Semin Reprod Med
, vol.32
, pp. 35-42
-
-
Sirota, I.1
Zarek, S.M.2
Segars, J.H.3
-
2
-
-
84925226158
-
SnapShot: the human microbiome
-
2 González, A., Vázquez-Baeza, Y., Knight, R., SnapShot: the human microbiome. Cell 158 (2014), 690–691.
-
(2014)
Cell
, vol.158
, pp. 690-691
-
-
González, A.1
Vázquez-Baeza, Y.2
Knight, R.3
-
3
-
-
0037114924
-
Evaluation of the bacterial vaginal flora of 20 postmenopausal women by direct (Nugent score) and molecular (polymerase chain reaction and denaturing gradient gel electrophoresis) techniques
-
3 Burton, J.P., Reid, G., Evaluation of the bacterial vaginal flora of 20 postmenopausal women by direct (Nugent score) and molecular (polymerase chain reaction and denaturing gradient gel electrophoresis) techniques. J Infect Dis 186 (2002), 1770–1780.
-
(2002)
J Infect Dis
, vol.186
, pp. 1770-1780
-
-
Burton, J.P.1
Reid, G.2
-
4
-
-
0036123869
-
Genetic diversity of vaginal lactobacilli from women in different countries based on 16S rRNA gene sequences
-
4 Pavlova, S.I., Kilic, A.O., Kilic, S.S., et al. Genetic diversity of vaginal lactobacilli from women in different countries based on 16S rRNA gene sequences. J Appl Microbiol 92 (2002), 451–459.
-
(2002)
J Appl Microbiol
, vol.92
, pp. 451-459
-
-
Pavlova, S.I.1
Kilic, A.O.2
Kilic, S.S.3
-
5
-
-
84860720391
-
Temporal dynamics of the human vaginal microbiota
-
132ra52
-
5 Gajer, P., Brotman, R.M., Bai, G., et al. Temporal dynamics of the human vaginal microbiota. Sci Transl Med, 4, 2012 132ra52.
-
(2012)
Sci Transl Med
, vol.4
-
-
Gajer, P.1
Brotman, R.M.2
Bai, G.3
-
6
-
-
84959329062
-
The human microbiome during bacterial vaginosis
-
6 Onderdonk, A.B., Delaney, M.L., Fichorova, R.N., The human microbiome during bacterial vaginosis. Clin Microbiol Rev 29 (2016), 223–238.
-
(2016)
Clin Microbiol Rev
, vol.29
, pp. 223-238
-
-
Onderdonk, A.B.1
Delaney, M.L.2
Fichorova, R.N.3
-
7
-
-
84902489255
-
The composition and stability of the vaginal microbiota of normal pregnant women is different from that of non-pregnant women
-
7 Romero, R., Hassan, S.S., Gajer, P., et al. The composition and stability of the vaginal microbiota of normal pregnant women is different from that of non-pregnant women. Microbiome, 2, 2014, 4.
-
(2014)
Microbiome
, vol.2
, pp. 4
-
-
Romero, R.1
Hassan, S.S.2
Gajer, P.3
-
8
-
-
79952750340
-
Vaginal microbiome of reproductive-age women
-
8 Ravel, J., Gajer, P., Abdo, Z., et al. Vaginal microbiome of reproductive-age women. Proc Natl Acad Sci U S A 108:Suppl (2011), 4680–4687.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 4680-4687
-
-
Ravel, J.1
Gajer, P.2
Abdo, Z.3
-
9
-
-
84907694056
-
The vaginal microbiota of pregnant women who subsequently have spontaneous preterm labor and delivery and those with a normal delivery at term
-
9 Romero, R., Hassan, S.S., Gajer, P., et al. The vaginal microbiota of pregnant women who subsequently have spontaneous preterm labor and delivery and those with a normal delivery at term. Microbiome, 2, 2014, 18.
-
(2014)
Microbiome
, vol.2
, pp. 18
-
-
Romero, R.1
Hassan, S.S.2
Gajer, P.3
-
10
-
-
0033600454
-
Influence of bacterial vaginosis on conception and miscarriage in the first trimester: cohort study
-
10 Ralph, S.G., Rutherford, A.J., Wilson, J.D., Influence of bacterial vaginosis on conception and miscarriage in the first trimester: cohort study. BMJ 319 (1999), 220–223.
-
(1999)
BMJ
, vol.319
, pp. 220-223
-
-
Ralph, S.G.1
Rutherford, A.J.2
Wilson, J.D.3
-
11
-
-
0028181434
-
Abnormal bacterial colonization of the genital tract and subsequent preterm delivery and late miscarriage
-
11 Hay, P.E., Lamont, R.F., Taylor-Robinson, D., Morgan, D.J., Ison, C., Pearson, J., Abnormal bacterial colonization of the genital tract and subsequent preterm delivery and late miscarriage. BMJ 308 (1994), 295–298.
-
(1994)
BMJ
, vol.308
, pp. 295-298
-
-
Hay, P.E.1
Lamont, R.F.2
Taylor-Robinson, D.3
Morgan, D.J.4
Ison, C.5
Pearson, J.6
-
12
-
-
3442896520
-
Bacterial vaginosis, the inflammatory response and the risk of preterm birth: a role for genetic epidemiology in the prevention of preterm birth
-
12 Romero, R., Chaiworapongsa, T., Kuivaniemi, H., Tromp, G., Bacterial vaginosis, the inflammatory response and the risk of preterm birth: a role for genetic epidemiology in the prevention of preterm birth. Am J Obstet Gynecol 190 (2004), 1509–1519.
-
(2004)
Am J Obstet Gynecol
, vol.190
, pp. 1509-1519
-
-
Romero, R.1
Chaiworapongsa, T.2
Kuivaniemi, H.3
Tromp, G.4
-
13
-
-
0032211846
-
Microbial flora of the cervix assessed at the time of embryo transfer adversely affects in vitro fertilization outcome
-
13 Fanchin, R., Harmas, A., Benaoudia, F., Lundkvist, U., Olivennes, F., Frydman, R., Microbial flora of the cervix assessed at the time of embryo transfer adversely affects in vitro fertilization outcome. Fertil Steril 70 (1998), 866–870.
-
(1998)
Fertil Steril
, vol.70
, pp. 866-870
-
-
Fanchin, R.1
Harmas, A.2
Benaoudia, F.3
Lundkvist, U.4
Olivennes, F.5
Frydman, R.6
-
14
-
-
0029794894
-
Incidence of microbial growth from the tip of the embryo transfer catheter after embryo transfer in relation to clinical pregnancy rate following in-vitro fertilization and embryo transfer
-
14 Egbase, P.E., al-Sharhan, M., al-Othman, S., al-Mutawa, M., Udo, E.E., Grudzinskas, J.G., Incidence of microbial growth from the tip of the embryo transfer catheter after embryo transfer in relation to clinical pregnancy rate following in-vitro fertilization and embryo transfer. Hum Reprod 11 (1996), 1687–1689.
-
(1996)
Hum Reprod
, vol.11
, pp. 1687-1689
-
-
Egbase, P.E.1
al-Sharhan, M.2
al-Othman, S.3
al-Mutawa, M.4
Udo, E.E.5
Grudzinskas, J.G.6
-
15
-
-
0033636588
-
Bacteria in the transfer catheter tip influence the live-birth rate after in vitro fertilization
-
15 Moore, D.E., Soules, M.R., Klein, N.A., Fujimoto, V.Y., Agnew, K.J., Eschenbach, D.A., Bacteria in the transfer catheter tip influence the live-birth rate after in vitro fertilization. Fertil Steril 74 (2000), 1118–1124.
-
(2000)
Fertil Steril
, vol.74
, pp. 1118-1124
-
-
Moore, D.E.1
Soules, M.R.2
Klein, N.A.3
Fujimoto, V.Y.4
Agnew, K.J.5
Eschenbach, D.A.6
-
16
-
-
0036181850
-
Bacterial colonization of the uterine cervix and success rate in assisted reproduction: results of a prospective survey
-
16 Salim, R., Ben-Shlomo, I., Colodner, R., Keness, Y., Shalev, E., Bacterial colonization of the uterine cervix and success rate in assisted reproduction: results of a prospective survey. Hum Reprod 17 (2002), 337–340.
-
(2002)
Hum Reprod
, vol.17
, pp. 337-340
-
-
Salim, R.1
Ben-Shlomo, I.2
Colodner, R.3
Keness, Y.4
Shalev, E.5
-
17
-
-
34848923593
-
Examination of bacterial contamination at the time of embryo transfer, and its impact on the IVF/pregnancy outcome
-
17 Selman, H., Mariani, M., Barnocchi, N., et al. Examination of bacterial contamination at the time of embryo transfer, and its impact on the IVF/pregnancy outcome. J Assist Reprod Genet 24 (2007), 395–399.
-
(2007)
J Assist Reprod Genet
, vol.24
, pp. 395-399
-
-
Selman, H.1
Mariani, M.2
Barnocchi, N.3
-
18
-
-
5144235471
-
Can endometrial infection/inflammation explain implantation failure, spontaneous abortion, and preterm birth after in vitro fertilization?
-
18 Romero, R., Espinoza, J., Mazor, M., Can endometrial infection/inflammation explain implantation failure, spontaneous abortion, and preterm birth after in vitro fertilization?. Fertil Steril 82 (2004), 799–804.
-
(2004)
Fertil Steril
, vol.82
, pp. 799-804
-
-
Romero, R.1
Espinoza, J.2
Mazor, M.3
-
19
-
-
0028901171
-
Sterility of the uterine cavity
-
19 Møller, B.R., Kristiansen, F.V., Thorsen, P., Frost, L., Mogensen, S.C., Sterility of the uterine cavity. Acta Obstet Gynecol Scand 74 (1995), 216–219.
-
(1995)
Acta Obstet Gynecol Scand
, vol.74
, pp. 216-219
-
-
Møller, B.R.1
Kristiansen, F.V.2
Thorsen, P.3
Frost, L.4
Mogensen, S.C.5
-
20
-
-
84928824181
-
Colonization of the upper genital tract by vaginal bacterial species in nonpregnant women
-
20 Mitchell, C.M., Haick, A., Nkwopara, E., et al. Colonization of the upper genital tract by vaginal bacterial species in nonpregnant women. Am J Obstet Gynecol 212 (2015), 611.e1–611.e9.
-
(2015)
Am J Obstet Gynecol
, vol.212
, pp. 611.e1-611.e9
-
-
Mitchell, C.M.1
Haick, A.2
Nkwopara, E.3
-
21
-
-
84880095925
-
Viral infection of the pregnant cervix predisposes to ascending bacterial infection
-
21 Racicot, K., Cardenas, I., Wunsche, V., et al. Viral infection of the pregnant cervix predisposes to ascending bacterial infection. J Immunol 191 (2013), 934–941.
-
(2013)
J Immunol
, vol.191
, pp. 934-941
-
-
Racicot, K.1
Cardenas, I.2
Wunsche, V.3
-
22
-
-
84858439578
-
The human microbiome: at the interface of health and disease
-
22 Cho, I., Blaser, M.J., The human microbiome: at the interface of health and disease. Nat Rev Genet 13 (2012), 260–270.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 260-270
-
-
Cho, I.1
Blaser, M.J.2
-
23
-
-
84885235527
-
PGE2 and PGF2 concentrations in human endometrial fluid as biomarkers for embryonic implantation
-
23 Vilella, F., Ramirez, L., Berlanga, O., et al. PGE2 and PGF2 concentrations in human endometrial fluid as biomarkers for embryonic implantation. J Clin Endocrinol Metab 98 (2013), 4123–4132.
-
(2013)
J Clin Endocrinol Metab
, vol.98
, pp. 4123-4132
-
-
Vilella, F.1
Ramirez, L.2
Berlanga, O.3
-
24
-
-
84883463987
-
The endometrial receptivity array for diagnosis and personalized embryo transfer as a treatment for patients with repeated implantation failure
-
24 Ruiz-Alonso, M., Blesa, D., Díaz-Gimeno, P., et al. The endometrial receptivity array for diagnosis and personalized embryo transfer as a treatment for patients with repeated implantation failure. Fertil Steril 100 (2013), 818–824.
-
(2013)
Fertil Steril
, vol.100
, pp. 818-824
-
-
Ruiz-Alonso, M.1
Blesa, D.2
Díaz-Gimeno, P.3
-
25
-
-
84859014125
-
Improved detection of bifidobacteria with optimized 16S rRNA-gene based pyrosequencing
-
25 Sim, K., Cox, M.J., Wopereis, H., Martin, R., Knol, J., Li, M.S., Improved detection of bifidobacteria with optimized 16S rRNA-gene based pyrosequencing. PLoS One, 7, 2012, e32543.
-
(2012)
PLoS One
, vol.7
, pp. e32543
-
-
Sim, K.1
Cox, M.J.2
Wopereis, H.3
Martin, R.4
Knol, J.5
Li, M.S.6
-
26
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
26 Caporaso, J.G., Kuczynski, J., Stombaugh, J., et al. QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7 (2010), 335–336.
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
-
27
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
27 Edgar, R.C., Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26 (2010), 2460–2461.
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
28
-
-
58149200948
-
The ribosomal database project: improved alignments and new tools for rRNA analysis
-
28 Cole, J.R., Wang, Q., Cardenas, E., et al. The ribosomal database project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res 37 (2009), D141–D145.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. D141-D145
-
-
Cole, J.R.1
Wang, Q.2
Cardenas, E.3
-
29
-
-
85006182406
-
-
The mathematical theory of communication. University of Illinois Press. Illinis book edition, 1963.
-
29 Shannon CE. The mathematical theory of communication. University of Illinois Press. Illinis book edition, 1963.
-
-
-
Shannon, C.E.1
-
30
-
-
33344464667
-
-
Measurement of diversity. Nature
-
30 Simpson EH. Measurement of diversity. Nature 1949;163:688-8.
-
(1949)
, vol.163
, pp. 688-8
-
-
Simpson, E.H.1
-
31
-
-
84941005620
-
Temporal and spatial variation of the human microbiota during pregnancy
-
31 DiGiulio, D.B., Callahan, B.J., McMurdie, P.J., et al. Temporal and spatial variation of the human microbiota during pregnancy. Proc Natl Acad Sci U S A 112 (2015), 11060–11065.
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. 11060-11065
-
-
DiGiulio, D.B.1
Callahan, B.J.2
McMurdie, P.J.3
-
32
-
-
46449134210
-
Inhibition of Neisseria gonorrhoeae epithelial cell interactions by vaginal Lactobacillus species
-
32 Spurbeck, R.R., Arvidson, C.G., Inhibition of Neisseria gonorrhoeae epithelial cell interactions by vaginal Lactobacillus species. Infect Immun 76 (2008), 3124–3130.
-
(2008)
Infect Immun
, vol.76
, pp. 3124-3130
-
-
Spurbeck, R.R.1
Arvidson, C.G.2
-
33
-
-
84857635851
-
The dynamics of the vaginal microbiome during infertility therapy with in vitro fertilization-embryo transfer
-
33 Hyman, R.W., Herndon, C.N., Jiang, H., et al. The dynamics of the vaginal microbiome during infertility therapy with in vitro fertilization-embryo transfer. J Assist Reprod Genet 29 (2012), 105–115.
-
(2012)
J Assist Reprod Genet
, vol.29
, pp. 105-115
-
-
Hyman, R.W.1
Herndon, C.N.2
Jiang, H.3
-
34
-
-
0032873589
-
The influence of bacterial vaginosis on in-vitro fertilization and embryo implantation during assisted reproduction treatment
-
34 Liversedge, N.H., Turner, A., Horner, P.J., Keay, S.D., Jenkins, J.M., Hull, M.G., The influence of bacterial vaginosis on in-vitro fertilization and embryo implantation during assisted reproduction treatment. Hum Reprod 14 (1999), 2411–2415.
-
(1999)
Hum Reprod
, vol.14
, pp. 2411-2415
-
-
Liversedge, N.H.1
Turner, A.2
Horner, P.J.3
Keay, S.D.4
Jenkins, J.M.5
Hull, M.G.6
-
35
-
-
84891768722
-
Risks associated with bacterial vaginosis in infertility patients: a systematic review and meta-analysis
-
35 van Oostrum, N., De Sutter, P., Meys, J., Verstraelen, H., Risks associated with bacterial vaginosis in infertility patients: a systematic review and meta-analysis. Hum Reprod 28 (2013), 1809–1815.
-
(2013)
Hum Reprod
, vol.28
, pp. 1809-1815
-
-
van Oostrum, N.1
De Sutter, P.2
Meys, J.3
Verstraelen, H.4
-
36
-
-
0033592232
-
Prophylactic antibiotics and endocervical microbial inoculation of the endometrium at embryo transfer
-
36 Egbase, P.E., Udo, E.E., al-Sharhan, M., Grudzinskas, J.G., Prophylactic antibiotics and endocervical microbial inoculation of the endometrium at embryo transfer. Lancet 354 (1999), 651–652.
-
(1999)
Lancet
, vol.354
, pp. 651-652
-
-
Egbase, P.E.1
Udo, E.E.2
al-Sharhan, M.3
Grudzinskas, J.G.4
-
37
-
-
84955198033
-
Endometrial microbiome at the time of embryo transfer: next-generation sequencing of the 16S ribosomal subunit
-
37 Franasiak, J.M., Werner, M.D., Juneau, C.R., et al. Endometrial microbiome at the time of embryo transfer: next-generation sequencing of the 16S ribosomal subunit. J Assist Reprod Genet 33 (2016), 129–136.
-
(2016)
J Assist Reprod Genet
, vol.33
, pp. 129-136
-
-
Franasiak, J.M.1
Werner, M.D.2
Juneau, C.R.3
-
38
-
-
0022870757
-
Vaginal lactobacilli inhibiting growth of Gardnerella vaginalis, Mobiluncus and other bacterial species cultured from vaginal content of women with bacterial vaginosis
-
38 Skarin, A., Sylwan, J., Vaginal lactobacilli inhibiting growth of Gardnerella vaginalis, Mobiluncus and other bacterial species cultured from vaginal content of women with bacterial vaginosis. Acta Pathol Microbiol Immunol Scand B 94 (1986), 399–403.
-
(1986)
Acta Pathol Microbiol Immunol Scand B
, vol.94
, pp. 399-403
-
-
Skarin, A.1
Sylwan, J.2
-
39
-
-
59849085546
-
Bacterial populations in the vaginas of healthy adolescent women
-
39 Yamamoto, T., Zhou, X., Williams, C.J., Hochwalt, A., Forney, L.J., Bacterial populations in the vaginas of healthy adolescent women. J Pediatr Adolesc Gynecol 22 (2009), 11–18.
-
(2009)
J Pediatr Adolesc Gynecol
, vol.22
, pp. 11-18
-
-
Yamamoto, T.1
Zhou, X.2
Williams, C.J.3
Hochwalt, A.4
Forney, L.J.5
-
40
-
-
75749089697
-
Embryologic outcome and secretome profile of implanted blastocysts obtained after coculture in human endometrial epithelial cells versus the sequential system
-
40 Dominguez, F., Gadea, B., Mercader, A., Esteban, F.J., Pellicer, A., Simón, C., Embryologic outcome and secretome profile of implanted blastocysts obtained after coculture in human endometrial epithelial cells versus the sequential system. Fertil Steril 93 (2010), 774–782.e1.
-
(2010)
Fertil Steril
, vol.93
, pp. 774-782.e1
-
-
Dominguez, F.1
Gadea, B.2
Mercader, A.3
Esteban, F.J.4
Pellicer, A.5
Simón, C.6
-
41
-
-
85006201268
-
-
Molecular interplay in successful implantation. Science. S. Sanders. Washington; Nov. 12, 2013; Ten critical topics in reproductive medicine: 44-8.
-
41 Cha J, Vilella F, Dey SK, Simón C. Molecular interplay in successful implantation. Science. S. Sanders. Washington; Nov. 12, 2013; Ten critical topics in reproductive medicine: 44-8.
-
-
-
Cha, J.1
Vilella, F.2
Dey, S.K.3
Simón, C.4
-
42
-
-
0038148431
-
Endometrial secretion aspiration prior to embryo transfer does not reduce implantation rates
-
1 van der Gaast, M.H., Beier-Hellwig, K., Fauser, B.C.J.M., Beier, H.M., Macklon, N.S., Endometrial secretion aspiration prior to embryo transfer does not reduce implantation rates. Reprod Biomed Online 7 (2003), 105–109.
-
(2003)
Reprod Biomed Online
, vol.7
, pp. 105-109
-
-
van der Gaast, M.H.1
Beier-Hellwig, K.2
Fauser, B.C.J.M.3
Beier, H.M.4
Macklon, N.S.5
-
43
-
-
78650418973
-
A genomic diagnostic tool for human endometrial receptivity based on the transcriptomic signature
-
2 Díaz-Gimeno, P., Horcajadas, J.A., Martínez-Conejero, J.A., et al. A genomic diagnostic tool for human endometrial receptivity based on the transcriptomic signature. Fertil Steril 95 (2011), 50–60.e1-15.
-
(2011)
Fertil Steril
, vol.95
, pp. 50-60.e1-15
-
-
Díaz-Gimeno, P.1
Horcajadas, J.A.2
Martínez-Conejero, J.A.3
-
44
-
-
84873295219
-
The accuracy and reproducibility of the endometrial receptivity array is superior to histology as a diagnostic method for endometrial receptivity
-
3 Díaz-Gimeno, P., Ruiz-Alonso, M., Blesa, D., et al. The accuracy and reproducibility of the endometrial receptivity array is superior to histology as a diagnostic method for endometrial receptivity. Fertil Steril 99 (2013), 508–517.
-
(2013)
Fertil Steril
, vol.99
, pp. 508-517
-
-
Díaz-Gimeno, P.1
Ruiz-Alonso, M.2
Blesa, D.3
-
45
-
-
0031573415
-
Comparison of DNA sequences with protein sequences
-
4 Pearson, W.R., Wood, T., Zhang, Z., Miller, W., Comparison of DNA sequences with protein sequences. Genomics 46 (1997), 24–36.
-
(1997)
Genomics
, vol.46
, pp. 24-36
-
-
Pearson, W.R.1
Wood, T.2
Zhang, Z.3
Miller, W.4
-
46
-
-
80255127234
-
Cutadapt removes adapter sequences from high-throughput sequencing reads
-
5 Martin, M., Cutadapt removes adapter sequences from high-throughput sequencing reads. EMBnet J, 17, 2011, 10.
-
(2011)
EMBnet J
, vol.17
, pp. 10
-
-
Martin, M.1
-
47
-
-
79961181125
-
UCHIME improves sensitivity and speed of chimera detection
-
6 Edgar, R.C., Haas, B.J., Clemente, J.C., Quince, C., Knight, R., UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 27 (2011), 2194–2200.
-
(2011)
Bioinformatics
, vol.27
, pp. 2194-2200
-
-
Edgar, R.C.1
Haas, B.J.2
Clemente, J.C.3
Quince, C.4
Knight, R.5
|