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Volumn 113, Issue 48, 2016, Pages 13887-13892

Genome-wide screen identifies host colonization determinants in a bacterial gut symbiont

Author keywords

Microbiota; Neisseriaceae; Symbiosis; Transposon mutagenesis; Type IV pilus

Indexed keywords

AMINO ACID; BACTERIAL PROTEIN; DOUBLE STRANDED DNA; IRON; O ANTIGEN; TRANSCRIPTOME;

EID: 84999266462     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1610856113     Document Type: Article
Times cited : (111)

References (46)
  • 1
    • 84866146940 scopus 로고    scopus 로고
    • Diversity, stability and resilience of the human gut microbiota
    • Lozupone CA, Stombaugh JI, Gordon JI, Jansson JK, Knight R (2012) Diversity, stability and resilience of the human gut microbiota. Nature 489(7415):220-230.
    • (2012) Nature , vol.489 , Issue.7415 , pp. 220-230
    • Lozupone, C.A.1    Stombaugh, J.I.2    Gordon, J.I.3    Jansson, J.K.4    Knight, R.5
  • 2
    • 84884411052 scopus 로고    scopus 로고
    • Bacterial colonization factors control specificity and stability of the gut microbiota
    • Lee SM, et al. (2013) Bacterial colonization factors control specificity and stability of the gut microbiota. Nature 501(7467):426-429.
    • (2013) Nature , vol.501 , Issue.7467 , pp. 426-429
    • Lee, S.M.1
  • 3
    • 69949123813 scopus 로고    scopus 로고
    • Identifying genetic determinants needed to establish a human gut symbiont in its habitat
    • Goodman AL, et al. (2009) Identifying genetic determinants needed to establish a human gut symbiont in its habitat. Cell Host Microbe 6(3):279-289.
    • (2009) Cell Host Microbe , vol.6 , Issue.3 , pp. 279-289
    • Goodman, A.L.1
  • 4
    • 84890266225 scopus 로고    scopus 로고
    • Tn-Seq analysis of Vibrio cholerae intestinal colonization reveals a role for T6SS-mediated antibacterial activity in the host
    • Fu Y, Waldor MK, Mekalanos JJ (2013) Tn-Seq analysis of Vibrio cholerae intestinal colonization reveals a role for T6SS-mediated antibacterial activity in the host. Cell Host Microbe 14(6):652-663.
    • (2013) Cell Host Microbe , vol.14 , Issue.6 , pp. 652-663
    • Fu, Y.1    Waldor, M.K.2    Mekalanos, J.J.3
  • 5
    • 84947983159 scopus 로고    scopus 로고
    • Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides
    • Wu M, et al. (2015) Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides. Science 350(6256):aac5992.
    • (2015) Science , vol.350 , Issue.6256
    • Wu, M.1
  • 6
    • 51349110626 scopus 로고    scopus 로고
    • Role of glycan synthesis in colonization of the mammalian gut by the bacterial symbiont Bacteroides fragilis
    • Coyne MJ, Chatzidaki-Livanis M, Paoletti LC, Comstock LE (2008) Role of glycan synthesis in colonization of the mammalian gut by the bacterial symbiont Bacteroides fragilis. Proc Natl Acad Sci USA 105(35):13099-13104.
    • (2008) Proc Natl Acad Sci USA , vol.105 , Issue.35 , pp. 13099-13104
    • Coyne, M.J.1    Chatzidaki-Livanis, M.2    Paoletti, L.C.3    Comstock, L.E.4
  • 7
    • 84967195417 scopus 로고    scopus 로고
    • The evolution of cooperation within the gut microbiota
    • Rakoff-Nahoum S, Foster KR, Comstock LE (2016) The evolution of cooperation within the gut microbiota. Nature 533(7602):255-259.
    • (2016) Nature , vol.533 , Issue.7602 , pp. 255-259
    • Rakoff-Nahoum, S.1    Foster, K.R.2    Comstock, L.E.3
  • 8
    • 84965065041 scopus 로고    scopus 로고
    • Gut microbial communities of social bees
    • Kwong WK, Moran NA (2016) Gut microbial communities of social bees. Nat Rev Microbiol 14(6):374-384.
    • (2016) Nat Rev Microbiol , vol.14 , Issue.6 , pp. 374-384
    • Kwong, W.K.1    Moran, N.A.2
  • 9
    • 84979609905 scopus 로고    scopus 로고
    • Cospeciation of gut microbiota with hominids
    • Moeller AH, et al. (2016) Cospeciation of gut microbiota with hominids. Science 353(6297):380-382.
    • (2016) Science , vol.353 , Issue.6297 , pp. 380-382
    • Moeller, A.H.1
  • 10
    • 84878887226 scopus 로고    scopus 로고
    • Cultivation and characterization of the gut symbionts of honey bees and bumble bees: Description of Snodgrassella alvi gen. nov., sp. nov., a member of the family Neisseriaceae of the Betaproteobacteria, and Gilliamella apicola gen. nov., sp. nov., a member of Orbaceae fam. nov., Orbales ord. nov., a sister taxon to the order 'Enterobacteriales' of the Gammaproteobacteria
    • Kwong WK, Moran NA (2013) Cultivation and characterization of the gut symbionts of honey bees and bumble bees: Description of Snodgrassella alvi gen. nov., sp. nov., a member of the family Neisseriaceae of the Betaproteobacteria, and Gilliamella apicola gen. nov., sp. nov., a member of Orbaceae fam. nov., Orbales ord. nov., a sister taxon to the order 'Enterobacteriales' of the Gammaproteobacteria. Int J Syst Evol Microbiol 63(Pt 6):2008-2018.
    • (2013) Int J Syst Evol Microbiol , vol.63 , pp. 2008-2018
    • Kwong, W.K.1    Moran, N.A.2
  • 11
    • 84979828704 scopus 로고    scopus 로고
    • Non-pathogenic Neisseria: Members of an abundant, multi-habitat, diverse genus
    • Liu G, Tang CM, Exley RM (2015) Non-pathogenic Neisseria: Members of an abundant, multi-habitat, diverse genus. Microbiology 161(7):1297-1312.
    • (2015) Microbiology , vol.161 , Issue.7 , pp. 1297-1312
    • Liu, G.1    Tang, C.M.2    Exley, R.M.3
  • 12
    • 84860462269 scopus 로고    scopus 로고
    • Establishment of characteristic gut bacteria during development of the honeybee worker
    • Martinson VG, Moy J, Moran NA (2012) Establishment of characteristic gut bacteria during development of the honeybee worker. Appl Environ Microbiol 78(8):2830-2840.
    • (2012) Appl Environ Microbiol , vol.78 , Issue.8 , pp. 2830-2840
    • Martinson, V.G.1    Moy, J.2    Moran, N.A.3
  • 13
    • 84884231850 scopus 로고    scopus 로고
    • Standard methods for research on Apis mellifera gut symbionts
    • Engel P, et al. (2013) Standard methods for research on Apis mellifera gut symbionts. J Apic Res 52(4):1-24.
    • (2013) J Apic Res , vol.52 , Issue.4 , pp. 1-24
    • Engel, P.1
  • 14
    • 84905671437 scopus 로고    scopus 로고
    • Genomics and host specialization of honey bee and bumble bee gut symbionts
    • Kwong WK, Engel P, Koch H, Moran NA (2014) Genomics and host specialization of honey bee and bumble bee gut symbionts. Proc Natl Acad Sci USA 111(31):11509-11514.
    • (2014) Proc Natl Acad Sci USA , vol.111 , Issue.31 , pp. 11509-11514
    • Kwong, W.K.1    Engel, P.2    Koch, H.3    Moran, N.A.4
  • 15
    • 84923478630 scopus 로고    scopus 로고
    • How bacterial pathogens colonize their hosts and invade deeper tissues
    • Ribet D, Cossart P (2015) How bacterial pathogens colonize their hosts and invade deeper tissues. Microbes Infect 17(3):173-183.
    • (2015) Microbes Infect , vol.17 , Issue.3 , pp. 173-183
    • Ribet, D.1    Cossart, P.2
  • 16
    • 0036241790 scopus 로고    scopus 로고
    • O-antigen structural variation: Mechanisms and possible roles in animal/plant-microbe interactions
    • Lerouge I, Vanderleyden J (2002) O-antigen structural variation: Mechanisms and possible roles in animal/plant-microbe interactions. FEMS Microbiol Rev 26(1):17-47.
    • (2002) FEMS Microbiol Rev , vol.26 , Issue.1 , pp. 17-47
    • Lerouge, I.1    Vanderleyden, J.2
  • 17
    • 33744728321 scopus 로고    scopus 로고
    • Trimeric autotransporter adhesins: Variable structure, common function
    • Linke D, Riess T, Autenrieth IB, Lupas A, Kempf VA (2006) Trimeric autotransporter adhesins: Variable structure, common function. Trends Microbiol 14(6):264-270.
    • (2006) Trends Microbiol , vol.14 , Issue.6 , pp. 264-270
    • Linke, D.1    Riess, T.2    Autenrieth, I.B.3    Lupas, A.4    Kempf, V.A.5
  • 18
    • 84960904709 scopus 로고    scopus 로고
    • Architecture of the type IVa pilus machine
    • Chang YW, et al. (2016) Architecture of the type IVa pilus machine. Science 351(6278):aad2001.
    • (2016) Science , vol.351 , Issue.6278
    • Chang, Y.W.1
  • 19
    • 2442589577 scopus 로고    scopus 로고
    • Type IV pilus structure and bacterial pathogenicity
    • Craig L, Pique ME, Tainer JA (2004) Type IV pilus structure and bacterial pathogenicity. Nat Rev Microbiol 2(5):363-378.
    • (2004) Nat Rev Microbiol , vol.2 , Issue.5 , pp. 363-378
    • Craig, L.1    Pique, M.E.2    Tainer, J.A.3
  • 20
    • 67749127365 scopus 로고    scopus 로고
    • Expression of Kingella kingae type IV pili is regulated by sigma54, PilS, and PilR
    • Kehl-Fie TE, Porsch EA, Miller SE, St Geme JW, 3rd (2009) Expression of Kingella kingae type IV pili is regulated by sigma54, PilS, and PilR. J Bacteriol 191(15):4976-4986.
    • (2009) J Bacteriol , vol.191 , Issue.15 , pp. 4976-4986
    • Kehl-Fie, T.E.1    Porsch, E.A.2    Miller, S.E.3    St Geme, J.W.4
  • 21
    • 84884703878 scopus 로고    scopus 로고
    • Sigma factor RpoN (σ54) regulates pilE transcription in commensal Neisseria elongata
    • Rendón MA, Hockenberry AM, McManus SA, So M (2013) Sigma factor RpoN (σ54) regulates pilE transcription in commensal Neisseria elongata. Mol Microbiol 90(1):103-113.
    • (2013) Mol Microbiol , vol.90 , Issue.1 , pp. 103-113
    • Rendón, M.A.1    Hockenberry, A.M.2    McManus, S.A.3    So, M.4
  • 22
    • 84894028767 scopus 로고    scopus 로고
    • Symbiotic digestion of lignocellulose in termite guts
    • Brune A (2014) Symbiotic digestion of lignocellulose in termite guts. Nat Rev Microbiol 12(3):168-180.
    • (2014) Nat Rev Microbiol , vol.12 , Issue.3 , pp. 168-180
    • Brune, A.1
  • 23
    • 84862773450 scopus 로고    scopus 로고
    • The NtrY/X two-component system of Brucella spp. acts as a redox sensor and regulates the expression of nitrogen respiration enzymes
    • Carrica MdelC, Fernandez I, Martí MA, Paris G, Goldbaum FA (2012) The NtrY/X two-component system of Brucella spp. acts as a redox sensor and regulates the expression of nitrogen respiration enzymes. Mol Microbiol 85(1):39-50.
    • (2012) Mol Microbiol , vol.85 , Issue.1 , pp. 39-50
    • Carrica, M.D.C.1    Fernandez, I.2    Martí, M.A.3    Paris, G.4    Goldbaum, F.A.5
  • 24
    • 0001269042 scopus 로고
    • Protein and amino acid requirements of the honey bee (Apis mellifera L.)
    • de Groot AP (1953) Protein and amino acid requirements of the honey bee (Apis mellifera L.). Phys Comp Oec 3:197-285.
    • (1953) Phys Comp Oec , vol.3 , pp. 197-285
    • De Groot, A.P.1
  • 26
    • 84886260382 scopus 로고    scopus 로고
    • Identification of a core bacterial community within the large intestine of the horse
    • Dougal K, et al. (2013) Identification of a core bacterial community within the large intestine of the horse. PLoS One 8(10):e77660.
    • (2013) PLoS One , vol.8 , Issue.10 , pp. e77660
    • Dougal, K.1
  • 28
    • 84893468680 scopus 로고    scopus 로고
    • Self-poisoning of Mycobacterium tuberculosis by interrupting siderophore recycling
    • Jones CM, et al. (2014) Self-poisoning of Mycobacterium tuberculosis by interrupting siderophore recycling. Proc Natl Acad Sci USA 111(5):1945-1950.
    • (2014) Proc Natl Acad Sci USA , vol.111 , Issue.5 , pp. 1945-1950
    • Jones, C.M.1
  • 29
    • 79551663315 scopus 로고    scopus 로고
    • Discretely calibrated regulatory loops controlled by ppGpp partition gene induction across the 'feast to famine' gradient in Escherichia coli
    • Traxler MF, et al. (2011) Discretely calibrated regulatory loops controlled by ppGpp partition gene induction across the 'feast to famine' gradient in Escherichia coli. Mol Microbiol 79(4):830-845.
    • (2011) Mol Microbiol , vol.79 , Issue.4 , pp. 830-845
    • Traxler, M.F.1
  • 30
    • 83655163675 scopus 로고    scopus 로고
    • Deciphering the transcriptional regulatory logic of amino acid metabolism
    • Cho BK, Federowicz S, Park YS, Zengler K, Palsson BØ (2011) Deciphering the transcriptional regulatory logic of amino acid metabolism. Nat Chem Biol 8(1):65-71.
    • (2011) Nat Chem Biol , vol.8 , Issue.1 , pp. 65-71
    • Cho, B.K.1    Federowicz, S.2    Park, Y.S.3    Zengler, K.4    Palsson, B.Ø.5
  • 31
    • 78651335915 scopus 로고    scopus 로고
    • The RNA modification database, RNAMDB: 2011 Update
    • Cantara WA, et al. (2011) The RNA modification database, RNAMDB: 2011 update. Nucleic Acids Res 39(Database issue):D195-D201.
    • (2011) Nucleic Acids Res , vol.39 , Issue.DATABASE ISSUE , pp. D195-D201
    • Cantara, W.A.1
  • 33
    • 69049088645 scopus 로고    scopus 로고
    • Coordination of multiple dual oxidase-regulatory pathways in responses to commensal and infectious microbes in drosophila gut
    • Ha EM, et al. (2009) Coordination of multiple dual oxidase-regulatory pathways in responses to commensal and infectious microbes in drosophila gut. Nat Immunol 10(9):949-957.
    • (2009) Nat Immunol , vol.10 , Issue.9 , pp. 949-957
    • Ha, E.M.1
  • 34
    • 84999106996 scopus 로고    scopus 로고
    • A recombination puzzle solved: Role for new DNA repair systems in Helicobacter pylori diversity/persistence
    • ed Kruman I (InTech, Rijeka, Croatia), Chapter 1
    • Wang G, Maier RJ (2011) A recombination puzzle solved: Role for new DNA repair systems in Helicobacter pylori diversity/persistence. DNA Repair, ed Kruman I (InTech, Rijeka, Croatia), Chapter 1.
    • (2011) DNA Repair
    • Wang, G.1    Maier, R.J.2
  • 35
    • 33646851752 scopus 로고    scopus 로고
    • Pushing the envelope: Extracytoplasmic stress responses in bacterial pathogens
    • Rowley G, Spector M, Kormanec J, Roberts M (2006) Pushing the envelope: Extracytoplasmic stress responses in bacterial pathogens. Nat Rev Microbiol 4(5):383-394.
    • (2006) Nat Rev Microbiol , vol.4 , Issue.5 , pp. 383-394
    • Rowley, G.1    Spector, M.2    Kormanec, J.3    Roberts, M.4
  • 36
    • 84899738160 scopus 로고    scopus 로고
    • ZapE is a novel cell division protein interacting with FtsZ and modulating the Z-ring dynamics
    • Marteyn BS, et al. (2014) ZapE is a novel cell division protein interacting with FtsZ and modulating the Z-ring dynamics. MBio 5(2):e00022-14.
    • (2014) MBio , vol.5 , Issue.2
    • Marteyn, B.S.1
  • 37
    • 84921326751 scopus 로고    scopus 로고
    • Transcriptional landscape and essential genes of Neisseria gonorrhoeae
    • Remmele CW, et al. (2014) Transcriptional landscape and essential genes of Neisseria gonorrhoeae. Nucleic Acids Res 42(16):10579-10595.
    • (2014) Nucleic Acids Res , vol.42 , Issue.16 , pp. 10579-10595
    • Remmele, C.W.1
  • 38
    • 84905484563 scopus 로고    scopus 로고
    • Requirements for Pseudomonas aeruginosa acute burn and chronic surgical wound infection
    • Turner KH, Everett J, Trivedi U, Rumbaugh KP, Whiteley M (2014) Requirements for Pseudomonas aeruginosa acute burn and chronic surgical wound infection. PLoS Genet 10(7):e1004518.
    • (2014) PLoS Genet , vol.10 , Issue.7
    • Turner, K.H.1    Everett, J.2    Trivedi, U.3    Rumbaugh, K.P.4    Whiteley, M.5
  • 40
    • 84936951384 scopus 로고    scopus 로고
    • The bacterium Frischella perrara causes scab formation in the gut of its honeybee host
    • Engel P, Bartlett KD, Moran NA (2015) The bacterium Frischella perrara causes scab formation in the gut of its honeybee host. MBio 6(3):e00193-15.
    • (2015) MBio , vol.6 , pp. e00193-e00215
    • Engel, P.1    Bartlett, K.D.2    Moran, N.A.3
  • 41
    • 70349510646 scopus 로고    scopus 로고
    • Tracking insertion mutants within libraries by deep sequencing and a genome-wide screen for Haemophilus genes required in the lung
    • Gawronski JD, Wong SM, Giannoukos G, Ward DV, Akerley BJ (2009) Tracking insertion mutants within libraries by deep sequencing and a genome-wide screen for Haemophilus genes required in the lung. Proc Natl Acad Sci USA 106(38):16422-16427.
    • (2009) Proc Natl Acad Sci USA , vol.106 , Issue.38 , pp. 16422-16427
    • Gawronski, J.D.1    Wong, S.M.2    Giannoukos, G.3    Ward, D.V.4    Akerley, B.J.5
  • 42
    • 84884678257 scopus 로고    scopus 로고
    • A comprehensive analysis of in vitro and in vivo genetic fitness of Pseudomonas aeruginosa using high-throughput sequencing of transposon libraries
    • Skurnik D, et al. (2013) A comprehensive analysis of in vitro and in vivo genetic fitness of Pseudomonas aeruginosa using high-throughput sequencing of transposon libraries. PLoS Pathog 9(9):e1003582.
    • (2013) PLoS Pathog , vol.9 , Issue.9
    • Skurnik, D.1
  • 43
    • 84903956916 scopus 로고    scopus 로고
    • Genome-wide identification of Acinetobacter baumannii genes necessary for persistence in the lung
    • Wang N, Ozer EA, Mandel MJ, Hauser AR (2014) Genome-wide identification of Acinetobacter baumannii genes necessary for persistence in the lung. MBio 5(3):e01163-14.
    • (2014) MBio , vol.5 , pp. e01163-e01214
    • Wang, N.1    Ozer, E.A.2    Mandel, M.J.3    Hauser, A.R.4
  • 44
    • 84914127580 scopus 로고    scopus 로고
    • Global discovery of colonization determinants in the squid symbiont Vibrio fischeri
    • Brooks JF, 2nd, et al. (2014) Global discovery of colonization determinants in the squid symbiont Vibrio fischeri. Proc Natl Acad Sci USA 111(48):17284-17289.
    • (2014) Proc Natl Acad Sci USA , vol.111 , Issue.48 , pp. 17284-17289
    • Brooks, J.F.1
  • 45
    • 84952802045 scopus 로고    scopus 로고
    • Identification of population bottlenecks and colonization factors during assembly of bacterial communities within the zebrafish intestine
    • Stephens WZ, et al. (2015) Identification of population bottlenecks and colonization factors during assembly of bacterial communities within the zebrafish intestine. MBio 6(6):e01163-e15.
    • (2015) MBio , vol.6 , Issue.6 , pp. e01163-e01215
    • Stephens, W.Z.1


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