-
1
-
-
79953877213
-
Crystal structure of type III glutamine synthetase: Surprising reversal of the inter-ring interface
-
van Rooyen, J. M., Abratt, V. R., Belrhali, H., and Sewell, T. (2011) Crystal structure of type III glutamine synthetase: Surprising reversal of the inter-ring interface Structure 19, 471-483 10.1016/j.str.2011.02.001
-
(2011)
Structure
, vol.19
, pp. 471-483
-
-
Van Rooyen, J.M.1
Abratt, V.R.2
Belrhali, H.3
Sewell, T.4
-
2
-
-
0026088636
-
Glutamine synthetase gene evolution: A good molecular clock
-
Pesole, G., Bozzetti, M., Lanave, C., Preparata, G., and Saccone, C. (1991) Glutamine synthetase gene evolution: a good molecular clock Proc. Natl. Acad. Sci. U. S. A. 88, 522-526 10.1073/pnas.88.2.522
-
(1991)
Proc. Natl. Acad. Sci. U. S. A.
, vol.88
, pp. 522-526
-
-
Pesole, G.1
Bozzetti, M.2
Lanave, C.3
Preparata, G.4
Saccone, C.5
-
3
-
-
0027410137
-
Evolution of the glutamine synthetase gene, one of the oldest existing and functioning genes
-
Kumada, Y., Benson, D., Hillemann, D., Hosted, T., Rochefort, D., Thompson, C., Wohlleben, W., and Tateno, Y. (1993) Evolution of the glutamine synthetase gene, one of the oldest existing and functioning genes Proc. Natl. Acad. Sci. U. S. A. 90, 3009-3013 10.1073/pnas.90.7.3009
-
(1993)
Proc. Natl. Acad. Sci. U. S. A.
, vol.90
, pp. 3009-3013
-
-
Kumada, Y.1
Benson, D.2
Hillemann, D.3
Hosted, T.4
Rochefort, D.5
Thompson, C.6
Wohlleben, W.7
Tateno, Y.8
-
4
-
-
65249121277
-
The importance of cytosolic glutamine synthetase in nitrogen assimilation and recycling
-
Bernard, S. M. and Habash, D. Z. (2009) The importance of cytosolic glutamine synthetase in nitrogen assimilation and recycling New Phytol. 182, 608-620 10.1111/j.1469-8137.2009.02823.x
-
(2009)
New Phytol.
, vol.182
, pp. 608-620
-
-
Bernard, S.M.1
Habash, D.Z.2
-
5
-
-
0033933445
-
The presence of GSI-like genes in higher plants: Support for the paralogous evolution of GSI and GSII genes
-
Mathis, R., Gamas, P., Meyer, Y., and Cullimore, J. V. (2000) The presence of GSI-like genes in higher plants: support for the paralogous evolution of GSI and GSII genes J. Mol. Evol. 50, 116-122 10.1007/s002399910013
-
(2000)
J. Mol. Evol.
, vol.50
, pp. 116-122
-
-
Mathis, R.1
Gamas, P.2
Meyer, Y.3
Cullimore, J.V.4
-
6
-
-
0347579854
-
Expressed sequence tag analysis of adult human lens for the NEIBank Project: Over 2000 non-redundant transcripts, novel genes and splice variants
-
Wistow, G., Bernstein, S. L., Wyatt, M. K., Behal, A., Touchman, J. W., Bouffard, G., Smith, D., and Peterson, K. (2002) Expressed sequence tag analysis of adult human lens for the NEIBank Project: over 2000 non-redundant transcripts, novel genes and splice variants Mol. Vision 8, 171-184
-
(2002)
Mol. Vision
, vol.8
, pp. 171-184
-
-
Wistow, G.1
Bernstein, S.L.2
Wyatt, M.K.3
Behal, A.4
Touchman, J.W.5
Bouffard, G.6
Smith, D.7
Peterson, K.8
-
7
-
-
33845220269
-
Lengsin is a survivor of an ancient family of class i glutamine synthetases re-engineered by evolution for a role in the vertebrate lens
-
Wyatt, K., White, H. E., Wang, L., Bateman, O. A., Slingsby, C., Orlova, E. V., and Wistow, G. (2006) Lengsin is a survivor of an ancient family of class I glutamine synthetases re-engineered by evolution for a role in the vertebrate lens Structure 14, 1823-1834 10.1016/j.str.2006.10.008
-
(2006)
Structure
, vol.14
, pp. 1823-1834
-
-
Wyatt, K.1
White, H.E.2
Wang, L.3
Bateman, O.A.4
Slingsby, C.5
Orlova, E.V.6
Wistow, G.7
-
8
-
-
33749418364
-
Atomic Structure of Plant Glutamine Synthetase: A Key Enzyme for Plant Productivity
-
Unno, H., Uchida, T., Sugawara, H., Kurisu, G., Sugiyama, T., Yamaya, T., Sakakibara, H., Hase, T., and Kusunoki, M. (2006) Atomic Structure of Plant Glutamine Synthetase: A Key Enzyme For Plant Productivity J. Biol. Chem. 281, 29287-29296 10.1074/jbc.M601497200
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 29287-29296
-
-
Unno, H.1
Uchida, T.2
Sugawara, H.3
Kurisu, G.4
Sugiyama, T.5
Yamaya, T.6
Sakakibara, H.7
Hase, T.8
Kusunoki, M.9
-
9
-
-
36349018892
-
Crystal structures of mammalian glutamine synthetases illustrate substrate-induced conformational changes and provide opportunities for drug and herbicide design
-
Krajewski, W. W., Collins, R., Holmberg-Schiavone, L., Jones, T. A., Karlberg, T., and Mowbray, S. L. (2008) Crystal structures of mammalian glutamine synthetases illustrate substrate-induced conformational changes and provide opportunities for drug and herbicide design J. Mol. Biol. 375, 217-228 10.1016/j.jmb.2007.10.029
-
(2008)
J. Mol. Biol.
, vol.375
, pp. 217-228
-
-
Krajewski, W.W.1
Collins, R.2
Holmberg-Schiavone, L.3
Jones, T.A.4
Karlberg, T.5
Mowbray, S.L.6
-
10
-
-
0024417277
-
Refined atomic model of glutamine synthetase at 3.5 A resolution
-
Yamashita, M., Almassy, R., Janson, C., Cascio, D., and Eisenberg, D. (1989) Refined atomic model of glutamine synthetase at 3.5 A resolution J. Biol. Chem. 264, 17681-17690
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 17681-17690
-
-
Yamashita, M.1
Almassy, R.2
Janson, C.3
Cascio, D.4
Eisenberg, D.5
-
11
-
-
0034615560
-
Structure-function relationships of glutamine synthetases
-
Eisenberg, D., Gill, H. S., Pfluegl, G. M., and Rotstein, S. H. (2000) Structure-function relationships of glutamine synthetases Biochim. Biophys. Acta, Protein Struct. Mol. Enzymol. 1477, 122-145 10.1016/S0167-4838(99)00270-8
-
(2000)
Biochim. Biophys. Acta, Protein Struct. Mol. Enzymol.
, vol.1477
, pp. 122-145
-
-
Eisenberg, D.1
Gill, H.S.2
Pfluegl, G.M.3
Rotstein, S.H.4
-
12
-
-
0002324178
-
Glutamine synthetase of Escherichia coli: Some physical and chemical properties
-
Ginsburg, A. (1972) Glutamine synthetase of Escherichia coli: some physical and chemical properties Adv. Protein Chem. 26, 1-79 10.1016/S0065-3233(08)60139-4
-
(1972)
Adv. Protein Chem.
, vol.26
, pp. 1-79
-
-
Ginsburg, A.1
-
13
-
-
80455173502
-
Glutamine synthetase is a molecular target of nitric oxide in root nodules of Medicago truncatula and is regulated by tyrosine nitration
-
Melo, P. M., Silva, L. S., Ribeiro, I., Seabra, A. R., and Carvalho, H. G. (2011) Glutamine synthetase is a molecular target of nitric oxide in root nodules of Medicago truncatula and is regulated by tyrosine nitration Plant Physiol. 157, 1505-1517 10.1104/pp.111.186056
-
(2011)
Plant Physiol.
, vol.157
, pp. 1505-1517
-
-
Melo, P.M.1
Silva, L.S.2
Ribeiro, I.3
Seabra, A.R.4
Carvalho, H.G.5
-
14
-
-
0023476734
-
Purification of the glutamine synthetase II isozyme of Drosophila melanogaster and structural and functional comparison of glutamine synthetases i and II
-
De Pinto, V., Caggese, C., Prezioso, G., and Ritossa, F. (1987) Purification of the glutamine synthetase II isozyme of Drosophila melanogaster and structural and functional comparison of glutamine synthetases I and II Biochem. Genet. 25, 821-836 10.1007/BF00502602
-
(1987)
Biochem. Genet.
, vol.25
, pp. 821-836
-
-
De Pinto, V.1
Caggese, C.2
Prezioso, G.3
Ritossa, F.4
-
15
-
-
26844488226
-
A single glutamine synthetase gene produces tissue-specific subcellular localization by alternative splicing
-
Matthews, G. D., Gould, R. M., and Vardimon, L. (2005) A single glutamine synthetase gene produces tissue-specific subcellular localization by alternative splicing FEBS Lett. 579, 5527-5534 10.1016/j.febslet.2005.08.082
-
(2005)
FEBS Lett.
, vol.579
, pp. 5527-5534
-
-
Matthews, G.D.1
Gould, R.M.2
Vardimon, L.3
-
16
-
-
84155160658
-
The stressed synapse: The impact of stress and glucocorticoids on glutamate transmission
-
Popoli, M., Yan, Z., McEwen, B. S., and Sanacora, G. (2012) The stressed synapse: the impact of stress and glucocorticoids on glutamate transmission Nat. Rev. Neurosci. 13, 22-37 10.1038/nrn3138
-
(2012)
Nat. Rev. Neurosci.
, vol.13
, pp. 22-37
-
-
Popoli, M.1
Yan, Z.2
McEwen, B.S.3
Sanacora, G.4
-
17
-
-
84928536699
-
Hyperammonemia in gene-targeted mice lacking functional hepatic glutamine synthetase
-
Qvartskhava, N., Lang, P. A., Görg, B., Pozdeev, V. I., Ortiz, M. P., Lang, K. S., Bidmon, H. J., Lang, E., Leibrock, C. B., Herebian, D., Bode, J. G., Lang, F., and Häussinger, D. (2015) Hyperammonemia in gene-targeted mice lacking functional hepatic glutamine synthetase Proc. Natl. Acad. Sci. U. S. A. 112, 5521-5526 10.1073/pnas.1423968112
-
(2015)
Proc. Natl. Acad. Sci. U. S. A.
, vol.112
, pp. 5521-5526
-
-
Qvartskhava, N.1
Lang, P.A.2
Görg, B.3
Pozdeev, V.I.4
Ortiz, M.P.5
Lang, K.S.6
Bidmon, H.J.7
Lang, E.8
Leibrock, C.B.9
Herebian, D.10
Bode, J.G.11
Lang, F.12
Häussinger, D.13
-
18
-
-
0036093019
-
Glutamine synthetase in brain: Effect of ammonia
-
Suarez, I., Bodega, G., and Fernandez, B. (2002) Glutamine synthetase in brain: effect of ammonia Neurochem. Int. 41, 123-142 10.1016/S0197-0186(02)00033-5
-
(2002)
Neurochem. Int.
, vol.41
, pp. 123-142
-
-
Suarez, I.1
Bodega, G.2
Fernandez, B.3
-
19
-
-
0033963901
-
Neuronal expression of glutamine synthetase in Alzheimer's disease indicates a profound impairment of metabolic interactions with astrocytes
-
Robinson, S. R. (2000) Neuronal expression of glutamine synthetase in Alzheimer's disease indicates a profound impairment of metabolic interactions with astrocytes Neurochem. Int. 36, 471-482 10.1016/S0197-0186(99)00150-3
-
(2000)
Neurochem. Int.
, vol.36
, pp. 471-482
-
-
Robinson, S.R.1
-
20
-
-
84886311261
-
Astrocytes and glutamate homoeostasis in Alzheimer's disease: A decrease in glutamine synthetase, but not in glutamate transporter-1, in the prefrontal cortex
-
Kulijewicz-Nawrot, M., Syková, E., Chvátal, A., Verkhratsky, A., and Rodríguez, J. J. (2013) Astrocytes and glutamate homoeostasis in Alzheimer's disease: a decrease in glutamine synthetase, but not in glutamate transporter-1, in the prefrontal cortex ASN Neuro 5, 273-282 10.1042/AN20130017
-
(2013)
ASN Neuro
, vol.5
, pp. 273-282
-
-
Kulijewicz-Nawrot, M.1
Syková, E.2
Chvátal, A.3
Verkhratsky, A.4
Rodríguez, J.J.5
-
21
-
-
0035576818
-
Changes in the cellular distribution of glutamine synthetase in Alzheimer's disease
-
Robinson, S. R. (2001) Changes in the cellular distribution of glutamine synthetase in Alzheimer's disease J. Neurosci. Res. 66, 972-980 10.1002/jnr.10057
-
(2001)
J. Neurosci. Res.
, vol.66
, pp. 972-980
-
-
Robinson, S.R.1
-
22
-
-
79960887452
-
Age-dependent decrease in glutamine synthetase expression in the hippocampal astroglia of the triple transgenic Alzheimer's disease mouse model: Mechanism for deficient glutamatergic transmission?
-
Olabarria, M., Noristani, H. N., Verkhratsky, A., and Rodríguez, J. J. (2011) Age-dependent decrease in glutamine synthetase expression in the hippocampal astroglia of the triple transgenic Alzheimer's disease mouse model: mechanism for deficient glutamatergic transmission? Mol. Neurodegener. 6, 55 10.1186/1750-1326-6-55
-
(2011)
Mol. Neurodegener.
, vol.6
, pp. 55
-
-
Olabarria, M.1
Noristani, H.N.2
Verkhratsky, A.3
Rodríguez, J.J.4
-
23
-
-
84947043914
-
Astrocytes from adult Wistar rats aged in vitro show changes in glial functions
-
Souza, D. G., Bellaver, B., Raupp, G. S., Souza, D. O., and Quincozes-Santos, A. (2015) Astrocytes from adult Wistar rats aged in vitro show changes in glial functions Neurochem. Int. 90, 93-97 10.1016/j.neuint.2015.07.016
-
(2015)
Neurochem. Int.
, vol.90
, pp. 93-97
-
-
Souza, D.G.1
Bellaver, B.2
Raupp, G.S.3
Souza, D.O.4
Quincozes-Santos, A.5
-
24
-
-
27644536273
-
Congenital glutamine deficiency with glutamine synthetase mutations
-
Häberle, J., Görg, B., Rutsch, F., Schmidt, E., Toutain, A., Benoist, J.-F., Gelot, A., Suc, A.-L., Höhne, W., Schliess, F., Häussinger, D., and Koch, H. G. (2005) Congenital glutamine deficiency with glutamine synthetase mutations N. Engl. J. Med. 353, 1926-1933 10.1056/NEJMoa050456
-
(2005)
N. Engl. J. Med.
, vol.353
, pp. 1926-1933
-
-
Häberle, J.1
Görg, B.2
Rutsch, F.3
Schmidt, E.4
Toutain, A.5
Benoist, J.-F.6
Gelot, A.7
Suc, A.-L.8
Höhne, W.9
Schliess, F.10
Häussinger, D.11
Koch, H.G.12
-
25
-
-
33745085579
-
Inborn error of amino acid synthesis: Human glutamine synthetase deficiency
-
Häberle, J., Görg, B., Toutain, A., Rutsch, F., Benoist, J.-F., Gelot, A., Suc, A.-L., Koch, H. G., Schliess, F., and Häussinger, D. (2006) Inborn error of amino acid synthesis: human glutamine synthetase deficiency J. Inherited Metab. Dis. 29, 352-358 10.1007/s10545-006-0256-5
-
(2006)
J. Inherited Metab. Dis.
, vol.29
, pp. 352-358
-
-
Häberle, J.1
Görg, B.2
Toutain, A.3
Rutsch, F.4
Benoist, J.-F.5
Gelot, A.6
Suc, A.-L.7
Koch, H.G.8
Schliess, F.9
Häussinger, D.10
-
26
-
-
0342526461
-
Activated glutamate intermediate in the enzymatic synthesis of glutamine
-
Krishnaswamy, P., Pamiljans, V., and Meister, A. (1960) Activated glutamate intermediate in the enzymatic synthesis of glutamine J. Biol. Chem. 235, PC39-PC40
-
(1960)
J. Biol. Chem.
, vol.235
, pp. PC39-PC40
-
-
Krishnaswamy, P.1
Pamiljans, V.2
Meister, A.3
-
27
-
-
0015522451
-
Substrate binding and reaction intermediates of glutamine synthetase (Escherichia coli W) as studied by isotope exchanges
-
Wedler, F. and Boyer, P. (1972) Substrate binding and reaction intermediates of glutamine synthetase (Escherichia coli W) as studied by isotope exchanges J. Biol. Chem. 247, 984-992
-
(1972)
J. Biol. Chem.
, vol.247
, pp. 984-992
-
-
Wedler, F.1
Boyer, P.2
-
28
-
-
0017189048
-
Catalytic mechanisms of glutamine synthetase enzymes. Studies with analogs of possible intermediates and transition states
-
Wedler, F. C. and Horn, B. R. (1976) Catalytic mechanisms of glutamine synthetase enzymes. Studies with analogs of possible intermediates and transition states J. Biol. Chem. 251, 7530-7538
-
(1976)
J. Biol. Chem.
, vol.251
, pp. 7530-7538
-
-
Wedler, F.C.1
Horn, B.R.2
-
29
-
-
0028082017
-
Structural model for the reaction mechanism of glutamine synthetase, based on five crystal structures of enzyme-substrate complexes
-
Liaw, S. H. and Eisenberg, D. (1994) Structural model for the reaction mechanism of glutamine synthetase, based on five crystal structures of enzyme-substrate complexes Biochemistry 33, 675-681 10.1021/bi00169a007
-
(1994)
Biochemistry
, vol.33
, pp. 675-681
-
-
Liaw, S.H.1
Eisenberg, D.2
-
30
-
-
84959467438
-
Molecular Mechanisms of Glutamine Synthetase Mutations that Lead to Clinically Relevant Pathologies
-
Frieg, B., Görg, B., Homeyer, N., Keitel, V., Häussinger, D., and Gohlke, H. (2016) Molecular Mechanisms of Glutamine Synthetase Mutations that Lead to Clinically Relevant Pathologies PLoS Comput. Biol. 12, e1004693 10.1371/journal.pcbi.1004693
-
(2016)
PLoS Comput. Biol.
, vol.12
, pp. e1004693
-
-
Frieg, B.1
Görg, B.2
Homeyer, N.3
Keitel, V.4
Häussinger, D.5
Gohlke, H.6
-
31
-
-
84971254850
-
Reaction Mechanism of Mycobacterium Tuberculosis Glutamine Synthetase Using Quantum Mechanics/Molecular Mechanics Calculations
-
Moreira, C., Ramos, M. J., and Fernandes, P. A. (2016) Reaction Mechanism of Mycobacterium Tuberculosis Glutamine Synthetase Using Quantum Mechanics/Molecular Mechanics Calculations Chem.-Eur. J. 22, 9218-9225 10.1002/chem.201600305
-
(2016)
Chem. - Eur. J.
, vol.22
, pp. 9218-9225
-
-
Moreira, C.1
Ramos, M.J.2
Fernandes, P.A.3
-
32
-
-
34547559704
-
PDB2PQR: Expanding and upgrading automated preparation of biomolecular structures for molecular simulations
-
Dolinsky, T. J., Czodrowski, P., Li, H., Nielsen, J. E., Jensen, J. H., Klebe, G., and Baker, N. A. (2007) PDB2PQR: expanding and upgrading automated preparation of biomolecular structures for molecular simulations Nucleic Acids Res. 35, W522-W525 10.1093/nar/gkm276
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. W522-W525
-
-
Dolinsky, T.J.1
Czodrowski, P.2
Li, H.3
Nielsen, J.E.4
Jensen, J.H.5
Klebe, G.6
Baker, N.A.7
-
33
-
-
0029878720
-
VMD: Visual molecular dynamics
-
Humphrey, W., Dalke, A., and Schulten, K. (1996) VMD: visual molecular dynamics J. Mol. Graphics 14, 33-38 10.1016/0263-7855(96)00018-5
-
(1996)
J. Mol. Graphics
, vol.14
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
34
-
-
3042524904
-
A well-behaved electrostatic potential based method using charge restraints for deriving atomic charges: The RESP model
-
Bayly, C. I., Cieplak, P., Cornell, W., and Kollman, P. A. (1993) A well-behaved electrostatic potential based method using charge restraints for deriving atomic charges: the RESP model J. Phys. Chem. 97, 10269-10280 10.1021/j100142a004
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 10269-10280
-
-
Bayly, C.I.1
Cieplak, P.2
Cornell, W.3
Kollman, P.A.4
-
35
-
-
0037495965
-
Development of polyphosphate parameters for use with the AMBER force field
-
Meagher, K. L., Redman, L. T., and Carlson, H. A. (2003) Development of polyphosphate parameters for use with the AMBER force field J. Comput. Chem. 24, 1016-1025 10.1002/jcc.10262
-
(2003)
J. Comput. Chem.
, vol.24
, pp. 1016-1025
-
-
Meagher, K.L.1
Redman, L.T.2
Carlson, H.A.3
-
36
-
-
33645961739
-
A smooth particle mesh Ewald method
-
Essmann, U., Perera, L., Berkowitz, M. L., Darden, T., Lee, H., and Pedersen, L. G. (1995) A smooth particle mesh Ewald method J. Chem. Phys. 103, 8577-8593 10.1063/1.470117
-
(1995)
J. Chem. Phys.
, vol.103
, pp. 8577-8593
-
-
Essmann, U.1
Perera, L.2
Berkowitz, M.L.3
Darden, T.4
Lee, H.5
Pedersen, L.G.6
-
37
-
-
33646940952
-
Numerical integration of the cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
-
Ryckaert, J.-P., Ciccotti, G., and Berendsen, H. J. (1977) Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes J. Comput. Phys. 23, 327-341 10.1016/0021-9991(77)90098-5
-
(1977)
J. Comput. Phys.
, vol.23
, pp. 327-341
-
-
Ryckaert, J.-P.1
Ciccotti, G.2
Berendsen, H.J.3
-
38
-
-
33748460871
-
Imaging the migration pathways for O 2, CO, NO, and Xe inside myoglobin
-
Cohen, J., Arkhipov, A., Braun, R., and Schulten, K. (2006) Imaging the migration pathways for O 2, CO, NO, and Xe inside myoglobin Biophys. J. 91, 1844-1857 10.1529/biophysj.106.085746
-
(2006)
Biophys. J.
, vol.91
, pp. 1844-1857
-
-
Cohen, J.1
Arkhipov, A.2
Braun, R.3
Schulten, K.4
-
39
-
-
47049083320
-
Finding gas migration pathways in proteins using implicit ligand sampling
-
Cohen, J., Olsen, K. W., and Schulten, K. (2008) Finding gas migration pathways in proteins using implicit ligand sampling Methods Enzymol. 437, 439-457 10.1016/S0076-6879(07)37022-5
-
(2008)
Methods Enzymol.
, vol.437
, pp. 439-457
-
-
Cohen, J.1
Olsen, K.W.2
Schulten, K.3
-
40
-
-
84908628084
-
Engineered chimeras reveal the structural basis of hexacoordination in globins: A case study of neuroglobin and myoglobin
-
Boron, I., Capece, L., Pennacchietti, F., Wetzler, D. E., Bruno, S., Abbruzzetti, S., Chisari, L., Luque, F. J., Viappiani, C., Marti, M. A., Estrin, D. A., and Nadra, A. D. (2015) Engineered chimeras reveal the structural basis of hexacoordination in globins: A case study of neuroglobin and myoglobin Biochim. Biophys. Acta, Gen. Subj. 1850, 169-177 10.1016/j.bbagen.2014.10.006
-
(2015)
Biochim. Biophys. Acta, Gen. Subj.
, vol.1850
, pp. 169-177
-
-
Boron, I.1
Capece, L.2
Pennacchietti, F.3
Wetzler, D.E.4
Bruno, S.5
Abbruzzetti, S.6
Chisari, L.7
Luque, F.J.8
Viappiani, C.9
Marti, M.A.10
Estrin, D.A.11
Nadra, A.D.12
-
41
-
-
84893831206
-
Ligand uptake modulation by internal water molecules and hydrophobic cavities in hemoglobins
-
Bustamante, J. P., Abbruzzetti, S., Marcelli, A., Gauto, D., Boechi, L., Bonamore, A., Boffi, A., Bruno, S., Feis, A., Foggi, P., Estrin, D. A., and Viappiani, C. (2014) Ligand uptake modulation by internal water molecules and hydrophobic cavities in hemoglobins J. Phys. Chem. B 118, 1234-1245 10.1021/jp410724z
-
(2014)
J. Phys. Chem. B
, vol.118
, pp. 1234-1245
-
-
Bustamante, J.P.1
Abbruzzetti, S.2
Marcelli, A.3
Gauto, D.4
Boechi, L.5
Bonamore, A.6
Boffi, A.7
Bruno, S.8
Feis, A.9
Foggi, P.10
Estrin, D.A.11
Viappiani, C.12
-
42
-
-
84956796262
-
Evolutionary and functional relationships in the truncated hemoglobin family
-
Bustamante, J. P., Radusky, L., Boechi, L., Estrin, D. A., ten Have, A., and Martí, M. A. (2016) Evolutionary and functional relationships in the truncated hemoglobin family PLoS Comput. Biol. 12, e1004701 10.1371/journal.pcbi.1004701
-
(2016)
PLoS Comput. Biol.
, vol.12
, pp. e1004701
-
-
Bustamante, J.P.1
Radusky, L.2
Boechi, L.3
Estrin, D.A.4
Ten Have, A.5
Martí, M.A.6
-
43
-
-
79958242994
-
Comparing and combining implicit ligand sampling with multiple steered molecular dynamics to study ligand migration processes in heme proteins
-
Forti, F., Boechi, L., Estrin, D. A., and Marti, M. A. (2011) Comparing and combining implicit ligand sampling with multiple steered molecular dynamics to study ligand migration processes in heme proteins J. Comput. Chem. 32, 2219-2231 10.1002/jcc.21805
-
(2011)
J. Comput. Chem.
, vol.32
, pp. 2219-2231
-
-
Forti, F.1
Boechi, L.2
Estrin, D.A.3
Marti, M.A.4
-
44
-
-
84863638846
-
Following ligand migration pathways from picoseconds to milliseconds in type II truncated hemoglobin from Thermobifida fusca
-
Marcelli, A., Abbruzzetti, S., Bustamante, J. P., Feis, A., Bonamore, A., Boffi, A., Gellini, C., Salvi, P. R., Estrin, D. A., Bruno, S., Viappiani, C., and Foggi, P. (2012) Following ligand migration pathways from picoseconds to milliseconds in type II truncated hemoglobin from Thermobifida fusca PLoS One 7, e39884 10.1371/journal.pone.0039884
-
(2012)
PLoS One
, vol.7
, pp. e39884
-
-
Marcelli, A.1
Abbruzzetti, S.2
Bustamante, J.P.3
Feis, A.4
Bonamore, A.5
Boffi, A.6
Gellini, C.7
Salvi, P.R.8
Estrin, D.A.9
Bruno, S.10
Viappiani, C.11
Foggi, P.12
-
45
-
-
18744400238
-
Multiple-steering QM-MM calculation of the free energy profile in chorismate mutase
-
Crespo, A., Martí, M. A., Estrin, D. A., and Roitberg, A. E. (2005) Multiple-steering QM-MM calculation of the free energy profile in chorismate mutase J. Am. Chem. Soc. 127, 6940-6941 10.1021/ja0452830
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 6940-6941
-
-
Crespo, A.1
Martí, M.A.2
Estrin, D.A.3
Roitberg, A.E.4
-
46
-
-
4243754128
-
Nonequilibrium equality for free energy differences
-
Jarzynski, C. (1997) Nonequilibrium equality for free energy differences Phys. Rev. Lett. 78, 2690 10.1103/PhysRevLett.78.2690
-
(1997)
Phys. Rev. Lett.
, vol.78
, pp. 2690
-
-
Jarzynski, C.1
-
47
-
-
51649087455
-
Dynamical characterization of the heme NO oxygen binding (HNOX) domain. Insight into soluble guanylate cyclase allosteric transition†
-
Capece, L., Estrin, D. A., and Marti, M. A. (2008) Dynamical characterization of the heme NO oxygen binding (HNOX) domain. Insight into soluble guanylate cyclase allosteric transition† Biochemistry 47, 9416-9427 10.1021/bi800682k
-
(2008)
Biochemistry
, vol.47
, pp. 9416-9427
-
-
Capece, L.1
Estrin, D.A.2
Marti, M.A.3
-
48
-
-
84926371613
-
Protein topology determines cysteine oxidation fate: The case of sulfenyl amide formation among protein families
-
Defelipe, L. A., Lanzarotti, E., Gauto, D., Marti, M. A., and Turjanski, A. G. (2015) Protein topology determines cysteine oxidation fate: the case of sulfenyl amide formation among protein families PLoS Comput. Biol. 11, e1004051 10.1371/journal.pcbi.1004051
-
(2015)
PLoS Comput. Biol.
, vol.11
, pp. e1004051
-
-
Defelipe, L.A.1
Lanzarotti, E.2
Gauto, D.3
Marti, M.A.4
Turjanski, A.G.5
-
49
-
-
33748269730
-
Free energy calculations with non-equilibrium methods: Applications of the Jarzynski relationship
-
Xiong, H., Crespo, A., Marti, M., Estrin, D., and Roitberg, A. E. (2006) Free energy calculations with non-equilibrium methods: applications of the Jarzynski relationship Theor. Chem. Acc. 116, 338-346 10.1007/s00214-005-0072-2
-
(2006)
Theor. Chem. Acc.
, vol.116
, pp. 338-346
-
-
Xiong, H.1
Crespo, A.2
Marti, M.3
Estrin, D.4
Roitberg, A.E.5
-
50
-
-
23044445202
-
Structure of Mycobacterium tuberculosis glutamine synthetase in complex with a transition-state mimic provides functional insights
-
Krajewski, W. W., Jones, T. A., and Mowbray, S. L. (2005) Structure of Mycobacterium tuberculosis glutamine synthetase in complex with a transition-state mimic provides functional insights Proc. Natl. Acad. Sci. U. S. A. 102, 10499-10504 10.1073/pnas.0502248102
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 10499-10504
-
-
Krajewski, W.W.1
Jones, T.A.2
Mowbray, S.L.3
-
51
-
-
0030671445
-
Expression, purification, and characterization of recombinant human glutamine synthetase
-
Listrom, D. C., Morizono, H., Rajagopal, S. B., McCann, T. M., Tuchman, M., and Allewell, M. N. (1997) Expression, purification, and characterization of recombinant human glutamine synthetase Biochem. J. 328, 159-163 10.1042/bj3280159
-
(1997)
Biochem. J.
, vol.328
, pp. 159-163
-
-
Listrom, D.C.1
Morizono, H.2
Rajagopal, S.B.3
McCann, T.M.4
Tuchman, M.5
Allewell, M.N.6
-
52
-
-
85012045784
-
Central Role of Glutamate Metabolism in the Maintenance of Nitrogen Homeostasis in Normal and Hyperammonemic Brain
-
Cooper, A. J. and Jeitner, T. M. (2016) Central Role of Glutamate Metabolism in the Maintenance of Nitrogen Homeostasis in Normal and Hyperammonemic Brain Biomolecules 6, 16 10.3390/biom6020016
-
(2016)
Biomolecules
, vol.6
, pp. 16
-
-
Cooper, A.J.1
Jeitner, T.M.2
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