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Volumn 12, Issue 10, 2016, Pages

A Viral Immunity Chromosome in the Marine Picoeukaryote, Ostreococcus tauri

Author keywords

[No Author keywords available]

Indexed keywords

GLYCOSYLTRANSFERASE; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR OTV5; UNCLASSIFIED DRUG;

EID: 84992745852     PISSN: 15537366     EISSN: 15537374     Source Type: Journal    
DOI: 10.1371/journal.ppat.1005965     Document Type: Article
Times cited : (30)

References (96)
  • 1
    • 84857108004 scopus 로고    scopus 로고
    • Phytoplankton distribution patterns in the northwestern Sargasso Sea revealed by small subunit rRNA genes from plastids
    • 21955994,..;: –.
    • Treusch AH, Demir-Hilton E, Vergin KL, Worden AZ, Carlson CA, Donatz MG, et al. Phytoplankton distribution patterns in the northwestern Sargasso Sea revealed by small subunit rRNA genes from plastids. ISME J. 2012;6: 481–492. doi: 10.1038/ismej.2011.11721955994
    • (2012) ISME J , vol.6 , pp. 481-492
    • Treusch, A.H.1    Demir-Hilton, E.2    Vergin, K.L.3    Worden, A.Z.4    Carlson, C.A.5    Donatz, M.G.6
  • 2
    • 79959578913 scopus 로고    scopus 로고
    • Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
    • 21289652,.;: –.
    • Demir-Hilton E, Sudek S, Cuvelier ML, Gentemann CL, Zehr JP, Worden AZ, Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus. ISME J. 2011;5: 1095–1107. doi: 10.1038/ismej.2010.20921289652
    • (2011) ISME J , vol.5 , pp. 1095-1107
    • Demir-Hilton, E.1    Sudek, S.2    Cuvelier, M.L.3    Gentemann, C.L.4    Zehr, J.P.5    Worden, A.Z.6
  • 3
    • 49649093132 scopus 로고    scopus 로고
    • The diversity of small eukaryotic phytoplankton (< = 3 μm) in marine ecosystems
    • 18564290,.;: –.
    • Vaulot D, Eikrem W, Viprey M, Moreau H, The diversity of small eukaryotic phytoplankton (< = 3 μm) in marine ecosystems. Fems Microbiology Reviews. 2008;32: 795–820. doi: 10.1111/j.1574-6976.2008.00121.x18564290
    • (2008) Fems Microbiology Reviews , vol.32 , pp. 795-820
    • Vaulot, D.1    Eikrem, W.2    Viprey, M.3    Moreau, H.4
  • 4
    • 84925823425 scopus 로고    scopus 로고
    • An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies
    • 25494611,..;:.
    • Blanc-Mathieu R, Verhelst B, Derelle E, Rombauts S, Bouget F-Y, Carré I, et al. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. BMC Genomics. 2014;15: 1103. doi: 10.1186/1471-2164-15-110325494611
    • (2014) BMC Genomics , vol.15 , pp. 1103
    • Blanc-Mathieu, R.1    Verhelst, B.2    Derelle, E.3    Rombauts, S.4    Bouget, F.-Y.5    Carré, I.6
  • 7
    • 84865319982 scopus 로고    scopus 로고
    • Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage
    • 22925495,..;:.
    • Moreau H, Verhelst B, Couloux A, Derelle E, Rombauts S, Grimsley N, et al. Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage. Genome Biology. 2012;13: R74. doi: 10.1186/gb-2012-13-8-r7422925495
    • (2012) Genome Biology , vol.13 , pp. R74
    • Moreau, H.1    Verhelst, B.2    Couloux, A.3    Derelle, E.4    Rombauts, S.5    Grimsley, N.6
  • 8
    • 64849088316 scopus 로고    scopus 로고
    • Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas
    • 19359590,..;: –.
    • Worden A, Lee J-H, Mock T, Rouzé P, Simmons MP, Aerts AL, et al. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Science. 2009;324: 268–272. doi: 10.1126/science.116722219359590
    • (2009) Science , vol.324 , pp. 268-272
    • Worden, A.1    Lee, J.-H.2    Mock, T.3    Rouzé, P.4    Simmons, M.P.5    Aerts, A.L.6
  • 9
    • 84928799273 scopus 로고    scopus 로고
    • Microbial community transcriptional networks are conserved in three domains at ocean basin scales
    • 25775583,.;: –.
    • Aylward FO, Eppley JM, Smith JM, Chavez FP, Scholin CA, DeLong EF, Microbial community transcriptional networks are conserved in three domains at ocean basin scales. PNAS. 2015;112: 5443–5448. doi: 10.1073/pnas.150288311225775583
    • (2015) PNAS , vol.112 , pp. 5443-5448
    • Aylward, F.O.1    Eppley, J.M.2    Smith, J.M.3    Chavez, F.P.4    Scholin, C.A.5    DeLong, E.F.6
  • 10
    • 84873455505 scopus 로고    scopus 로고
    • Pattern and synchrony of gene expression among sympatric marine microbial populations
    • 23345438,..;: –.
    • Ottesen EA, Young CR, Eppley JM, Ryan JP, Chavez FP, Scholin CA, et al. Pattern and synchrony of gene expression among sympatric marine microbial populations. PNAS. 2013;110: E488–E497. doi: 10.1073/pnas.122209911023345438
    • (2013) PNAS , vol.110 , pp. E488-E497
    • Ottesen, E.A.1    Young, C.R.2    Eppley, J.M.3    Ryan, J.P.4    Chavez, F.P.5    Scholin, C.A.6
  • 11
    • 84862663959 scopus 로고    scopus 로고
    • Metagenomes of the Picoalga Bathycoccus from the Chile Coastal Upwelling
    • 22745802,..;:.
    • Vaulot D, Lepère C, Toulza E, De la Iglesia R, Poulain J, Gaboyer F, et al. Metagenomes of the Picoalga Bathycoccus from the Chile Coastal Upwelling. PLoS ONE. 2012;7: e39648. doi: 10.1371/journal.pone.003964822745802
    • (2012) PLoS ONE , vol.7 , pp. e39648
    • Vaulot, D.1    Lepère, C.2    Toulza, E.3    De la Iglesia, R.4    Poulain, J.5    Gaboyer, F.6
  • 12
    • 84902345325 scopus 로고    scopus 로고
    • Efficient gene targeting and removal of foreign DNA by homologous recombination in the picoeukaryote Ostreococcus
    • 24698018,..;: –.
    • Lozano J-C, Schatt P, Botebol H, Vergé V, Lesuisse E, Blain S, et al. Efficient gene targeting and removal of foreign DNA by homologous recombination in the picoeukaryote Ostreococcus. Plant J. 2014;78: 1073–1083. doi: 10.1111/tpj.1253024698018
    • (2014) Plant J , vol.78 , pp. 1073-1083
    • Lozano, J.-C.1    Schatt, P.2    Botebol, H.3    Vergé, V.4    Lesuisse, E.5    Blain, S.6
  • 14
    • 79959997384 scopus 로고    scopus 로고
    • Genome diversity in the smallest marine photosynthetic eukaryotes
    • 21540104,.;: –.
    • Piganeau G, Grimsley N, Moreau H, Genome diversity in the smallest marine photosynthetic eukaryotes. Research in Microbiology. 2011;162: 570–577. doi: 10.1016/j.resmic.2011.04.00521540104
    • (2011) Research in Microbiology , vol.162 , pp. 570-577
    • Piganeau, G.1    Grimsley, N.2    Moreau, H.3
  • 15
    • 84895835195 scopus 로고    scopus 로고
    • Variation, Evolution, and Correlation Analysis of C+G Content and Genome or Chromosome Size in Different Kingdoms and Phyla
    • 24551092,.;:.
    • Li X-Q, Du D, Variation, Evolution, and Correlation Analysis of C+G Content and Genome or Chromosome Size in Different Kingdoms and Phyla. PLoS ONE. 2014;9: e88339. doi: 10.1371/journal.pone.008833924551092
    • (2014) PLoS ONE , vol.9 , pp. e88339
    • Li, X.-Q.1    Du, D.2
  • 17
    • 84880983608 scopus 로고    scopus 로고
    • Morphology, Genome Plasticity, and Phylogeny in the Genus Ostreococcus Reveal a Cryptic Species, O. mediterraneus sp. nov. (Mamiellales, Mamiellophyceae)
    • 23892412,..;: –.
    • Subirana L, Péquin B, Michely S, Escande M-L, Meilland J, Derelle E, et al. Morphology, Genome Plasticity, and Phylogeny in the Genus Ostreococcus Reveal a Cryptic Species, O. mediterraneus sp. nov. (Mamiellales, Mamiellophyceae). Protist. 2013;164: 643–659. doi: 10.1016/j.protis.2013.06.00223892412
    • (2013) Protist , vol.164 , pp. 643-659
    • Subirana, L.1    Péquin, B.2    Michely, S.3    Escande, M.-L.4    Meilland, J.5    Derelle, E.6
  • 18
    • 0001039810 scopus 로고
    • Viruses and the microbial loop
    • 24186448,.;: –.
    • Bratbak G, Thingstad F, Heldal M, Viruses and the microbial loop. Microb Ecol. 1994;28: 209–221. doi: 10.1007/BF0016681124186448
    • (1994) Microb Ecol , vol.28 , pp. 209-221
    • Bratbak, G.1    Thingstad, F.2    Heldal, M.3
  • 19
    • 34548792911 scopus 로고    scopus 로고
    • Marine viruses—major players in the global ecosystem
    • 17853907,.;: –.
    • Suttle CA, Marine viruses—major players in the global ecosystem. Nat Rev Microbiol. 2007;5: 801–12. doi: 10.1038/nrmicro175017853907
    • (2007) Nat Rev Microbiol , vol.5 , pp. 801-812
    • Suttle, C.A.1
  • 20
    • 84906809090 scopus 로고    scopus 로고
    • Factors affecting virus dynamics and microbial host-virus interactions in marine environments
    • 24754794,.;: –.
    • Mojica KDA, Brussaard CPD, Factors affecting virus dynamics and microbial host-virus interactions in marine environments. FEMS Microbiol Ecol. 2014;89: 495–515. doi: 10.1111/1574-6941.1234324754794
    • (2014) FEMS Microbiol Ecol , vol.89 , pp. 495-515
    • Mojica, K.D.A.1    Brussaard, C.P.D.2
  • 21
    • 0018424950 scopus 로고
    • Viruses of marine algae
    • Dodds JA, Viruses of marine algae. Experientia. 1979;35: 440–442. doi: 10.1007/BF01922694
    • (1979) Experientia , vol.35 , pp. 440-442
    • Dodds, J.A.1
  • 22
    • 77957931143 scopus 로고    scopus 로고
    • DNA viruses: the really big ones (giruses)
    • 20690825,.;: –.
    • Van Etten JL, Lane LC, Dunigan DD, DNA viruses: the really big ones (giruses). Annu Rev Microbiol. 2010;64: 83–99. doi: 10.1146/annurev.micro.112408.13433820690825
    • (2010) Annu Rev Microbiol , vol.64 , pp. 83-99
    • Van Etten, J.L.1    Lane, L.C.2    Dunigan, D.D.3
  • 23
    • 0018689242 scopus 로고
    • Virus Which Lyses the Marine Nanoflagellate Micromonas pusilla
    • Mayer JA, Taylor FJR, Virus Which Lyses the Marine Nanoflagellate Micromonas pusilla. Nature. 1979;281: 299–301.
    • (1979) Nature , vol.281 , pp. 299-301
    • Mayer, J.A.1    Taylor, F.J.R.2
  • 24
    • 48249111046 scopus 로고    scopus 로고
    • Life-cycle and genome of OtV5, a large DNA virus of the pelagic marine unicellular green alga Ostreococcus tauri
    • 18509524,..;:, –.
    • Derelle E, Ferraz C, Escande M-L, Eychenie S, Cooke R, Piganeau G, et al. Life-cycle and genome of OtV5, a large DNA virus of the pelagic marine unicellular green alga Ostreococcus tauri. PLoS ONE. 2008;3: e2250, 1–13. doi: 10.1371/journal.pone.000225018509524
    • (2008) PLoS ONE , vol.3 , pp. e2213-e2250
    • Derelle, E.1    Ferraz, C.2    Escande, M.-L.3    Eychenie, S.4    Cooke, R.5    Piganeau, G.6
  • 25
    • 84929629156 scopus 로고    scopus 로고
    • Diversity of Viruses Infecting the Green Microalga Ostreococcus lucimarinus
    • 25787287,.;: –.
    • Derelle E, Monier A, Cooke R, Worden AZ, Grimsley NH, Moreau H, Diversity of Viruses Infecting the Green Microalga Ostreococcus lucimarinus. J Virol. 2015;89: 5812–5821. doi: 10.1128/JVI.00246-1525787287
    • (2015) J Virol , vol.89 , pp. 5812-5821
    • Derelle, E.1    Monier, A.2    Cooke, R.3    Worden, A.Z.4    Grimsley, N.H.5    Moreau, H.6
  • 26
    • 78649419685 scopus 로고    scopus 로고
    • Marine Prasinovirus Genomes Show Low Evolutionary Divergence and Acquisition of Protein Metabolism Genes by Horizontal Gene Transfer
    • 20861243,.;: –.
    • Moreau H, Piganeau G, Desdevises Y, Cooke R, Derelle E, Grimsley N, Marine Prasinovirus Genomes Show Low Evolutionary Divergence and Acquisition of Protein Metabolism Genes by Horizontal Gene Transfer. J Virol. 2010;84: 12555–12563. doi: 10.1128/JVI.01123-1020861243
    • (2010) J Virol , vol.84 , pp. 12555-12563
    • Moreau, H.1    Piganeau, G.2    Desdevises, Y.3    Cooke, R.4    Derelle, E.5    Grimsley, N.6
  • 27
    • 79955421841 scopus 로고    scopus 로고
    • Genome Sequence of Ostreococcus tauri Virus OtV-2 Throws Light on the Role of Picoeukaryote Niche Separation in the Ocean
    • 21289127,.;: –.
    • Weynberg KD, Allen MJ, Gilg IC, Scanlan DJ, Wilson WH, Genome Sequence of Ostreococcus tauri Virus OtV-2 Throws Light on the Role of Picoeukaryote Niche Separation in the Ocean. J Virol. 2011;85: 4520–4529. doi: 10.1128/JVI.02131-1021289127
    • (2011) J Virol , vol.85 , pp. 4520-4529
    • Weynberg, K.D.1    Allen, M.J.2    Gilg, I.C.3    Scanlan, D.J.4    Wilson, W.H.5
  • 28
    • 79957985526 scopus 로고    scopus 로고
    • Acquisition and maintenance of resistance to viruses in eukaryotic phytoplankton populations
    • 21392198,.;: –.
    • Thomas R, Grimsley N, Escande M, Subirana L, Derelle E, Moreau H, Acquisition and maintenance of resistance to viruses in eukaryotic phytoplankton populations. Environmental Microbiology. 2011;13: 1412–1420. doi: 10.1111/j.1462-2920.2011.02441.x21392198
    • (2011) Environmental Microbiology , vol.13 , pp. 1412-1420
    • Thomas, R.1    Grimsley, N.2    Escande, M.3    Subirana, L.4    Derelle, E.5    Moreau, H.6
  • 29
    • 84898604312 scopus 로고    scopus 로고
    • Cophylogenetic interactions between marine viruses and eukaryotic picophytoplankton
    • 24669847,..;:.
    • Bellec L, Clerissi C, Edern R, Foulon E, Simon N, Grimsley N, et al. Cophylogenetic interactions between marine viruses and eukaryotic picophytoplankton. BMC Evolutionary Biology. 2014;14: 59. doi: 10.1186/1471-2148-14-5924669847
    • (2014) BMC Evolutionary Biology , vol.14 , pp. 59
    • Bellec, L.1    Clerissi, C.2    Edern, R.3    Foulon, E.4    Simon, N.5    Grimsley, N.6
  • 30
    • 84861401428 scopus 로고    scopus 로고
    • Prasinoviruses of the marine green alga Ostreococcus tauri are mainly species-specific
    • 22318150,.;: –.
    • Clerissi C, Desdevises Y, Grimsley NH, Prasinoviruses of the marine green alga Ostreococcus tauri are mainly species-specific. J Virol. 2012;86: 4611–4619. doi: 10.1128/JVI.07221-1122318150
    • (2012) J Virol , vol.86 , pp. 4611-4619
    • Clerissi, C.1    Desdevises, Y.2    Grimsley, N.H.3
  • 31
    • 77749309301 scopus 로고    scopus 로고
    • Trade-Offs between Competition and Defense Specialists among Unicellular Planktonic Organisms: the “Killing the Winner” Hypothesis Revisited
    • 20197498,.;: –.
    • Winter C, Bouvier T, Weinbauer M, Thingstad T, Trade-Offs between Competition and Defense Specialists among Unicellular Planktonic Organisms: the “Killing the Winner” Hypothesis Revisited. Microbiology and Molecular Biology Reviews. 2010;74: 42–57. doi: 10.1128/MMBR.00034-0920197498
    • (2010) Microbiology and Molecular Biology Reviews , vol.74 , pp. 42-57
    • Winter, C.1    Bouvier, T.2    Weinbauer, M.3    Thingstad, T.4
  • 32
    • 0027804112 scopus 로고
    • Viral mortality of the marine alga Emiliania huxleyi (Haptophyceae) and termination of algal blooms
    • Bratbak G, Egge JK, Heldal M, Viral mortality of the marine alga Emiliania huxleyi (Haptophyceae) and termination of algal blooms. Mar Ecol-Prog Ser. 1993;93: 39–48. doi: 10.3354/meps093039
    • (1993) Mar Ecol-Prog Ser , vol.93 , pp. 39-48
    • Bratbak, G.1    Egge, J.K.2    Heldal, M.3
  • 33
    • 15944429299 scopus 로고    scopus 로고
    • A mesocosm study of Phaeocystis globosa population dynamics—1. Regulatory role of viruses in bloom
    • Brussaard CPD, Kuipers B, Veldhuis MJW, A mesocosm study of Phaeocystis globosa population dynamics—1. Regulatory role of viruses in bloom. Harmful Algae. 2005;4: 859–874.
    • (2005) Harmful Algae , vol.4 , pp. 859-874
    • Brussaard, C.P.D.1    Kuipers, B.2    Veldhuis, M.J.W.3
  • 34
    • 84883147815 scopus 로고    scopus 로고
    • Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes
    • 23575371,..;: –.
    • Hingamp P, Grimsley N, Acinas SG, Clerissi C, Subirana L, Poulain J, et al. Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes. ISME J. 2013;7: 1678–1695. doi: 10.1038/ismej.2013.5923575371
    • (2013) ISME J , vol.7 , pp. 1678-1695
    • Hingamp, P.1    Grimsley, N.2    Acinas, S.G.3    Clerissi, C.4    Subirana, L.5    Poulain, J.6
  • 35
    • 84857121184 scopus 로고    scopus 로고
    • Unveiling in situ interactions between marine protists and bacteria through single cell sequencing
    • 21938022,..;: –.
    • Martinez-Garcia M, Brazel D, Poulton NJ, Swan BK, Gomez ML, Masland D, et al. Unveiling in situ interactions between marine protists and bacteria through single cell sequencing. The ISME Journal. 2012;6: 703–707. doi: 10.1038/ismej.2011.12621938022
    • (2012) The ISME Journal , vol.6 , pp. 703-707
    • Martinez-Garcia, M.1    Brazel, D.2    Poulton, N.J.3    Swan, B.K.4    Gomez, M.L.5    Masland, D.6
  • 36
    • 79955051631 scopus 로고    scopus 로고
    • Quantification of virus genes provides evidence for seed-bank populations of phycodnaviruses in Lake Ontario, Canada
    • 21124493,.;: –.
    • Short CM, Rusanova O, Short SM, Quantification of virus genes provides evidence for seed-bank populations of phycodnaviruses in Lake Ontario, Canada. ISME J. 2011;5: 810–821. doi: 10.1038/ismej.2010.18321124493
    • (2011) ISME J , vol.5 , pp. 810-821
    • Short, C.M.1    Rusanova, O.2    Short, S.M.3
  • 37
    • 0038040559 scopus 로고    scopus 로고
    • Stable coexistence in marine algal host-virus systems
    • Thyrhaug R, Stable coexistence in marine algal host-virus systems. Marine Ecology-Progress Series. 2003;254: 27–35.
    • (2003) Marine Ecology-Progress Series , vol.254 , pp. 27-35
    • Thyrhaug, R.1
  • 38
    • 34548297627 scopus 로고    scopus 로고
    • Diversity in morphology, infectivity, molecular characteristics and induced host resistance between two viruses infecting Micromonas pusilla
    • Zingone A, Natale F, Biffali E, Borra M, Forlani G, Sarno D, Diversity in morphology, infectivity, molecular characteristics and induced host resistance between two viruses infecting Micromonas pusilla. Aquatic Microbial Ecology. 2006;45: 1–14.
    • (2006) Aquatic Microbial Ecology , vol.45 , pp. 1-14
    • Zingone, A.1    Natale, F.2    Biffali, E.3    Borra, M.4    Forlani, G.5    Sarno, D.6
  • 39
    • 0002078111 scopus 로고
    • Micromonas pusilla Virus—the Virus Growth-Cycle and Associated Physiological Events within the Host-Cells—Host Range Mutation
    • Waters RE, Chan AT, Micromonas pusilla Virus—the Virus Growth-Cycle and Associated Physiological Events within the Host-Cells—Host Range Mutation. Journal of General Virology. 1982;63: 199–206.
    • (1982) Journal of General Virology , vol.63 , pp. 199-206
    • Waters, R.E.1    Chan, A.T.2
  • 40
    • 57349116021 scopus 로고    scopus 로고
    • The “Cheshire Cat” escape strategy of the coccolithophore Emiliania huxleyi in response to viral infection
    • 18824682,.;: –.
    • Frada M, Probert I, Allen MJ, Wilson WH, de Vargas C, The “Cheshire Cat” escape strategy of the coccolithophore Emiliania huxleyi in response to viral infection. Proc Natl Acad Sci USA. 2008;105: 15944–15949. doi: 10.1073/pnas.080770710518824682
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 15944-15949
    • Frada, M.1    Probert, I.2    Allen, M.J.3    Wilson, W.H.4    de Vargas, C.5
  • 41
    • 70350482665 scopus 로고    scopus 로고
    • Virus resistance in the toxic bloom-forming dinoflagellate Heterocapsa circularisquama to single-stranded RNA virus infection
    • 19735281,.;: –.
    • Tomaru Y, Mizumoto H, Nagasaki K, Virus resistance in the toxic bloom-forming dinoflagellate Heterocapsa circularisquama to single-stranded RNA virus infection. Environ Microbiol. 2009;11: 2915–2923. doi: 10.1111/j.1462-2920.2009.02047.x19735281
    • (2009) Environ Microbiol , vol.11 , pp. 2915-2923
    • Tomaru, Y.1    Mizumoto, H.2    Nagasaki, K.3
  • 42
    • 84951038686 scopus 로고    scopus 로고
    • Structure and Function of Centromeric and Pericentromeric Heterochromatin in Arabidopsis thaliana
    • 26648952,.;.
    • Simon L, Voisin M, Tatout C, Probst AV, Structure and Function of Centromeric and Pericentromeric Heterochromatin in Arabidopsis thaliana. Front Plant Sci. 2015; 1049. doi: 10.3389/fpls.2015.0104926648952
    • (2015) Front Plant Sci , pp. 1049
    • Simon, L.1    Voisin, M.2    Tatout, C.3    Probst, A.V.4
  • 43
    • 84947495092 scopus 로고    scopus 로고
    • Repetitive DNA in eukaryotic genomes
    • 26514350, (Pat)..;: –.
    • Biscotti MA, Olmo E, Heslop-Harrison JS, (Pat). Repetitive DNA in eukaryotic genomes. Chromosome Res. 2015;23: 415–420. doi: 10.1007/s10577-015-9499-z26514350
    • (2015) Chromosome Res , vol.23 , pp. 415-420
    • Biscotti, M.A.1    Olmo, E.2    Heslop-Harrison, J.S.3
  • 44
    • 0036263394 scopus 로고    scopus 로고
    • Expression and Characterization of Streptococcal rgp Genes Required for Rhamnan Synthesis in Escherichia coli
    • 12010977,.;: –.
    • Shibata Y, Yamashita Y, Ozaki K, Nakano Y, Koga T, Expression and Characterization of Streptococcal rgp Genes Required for Rhamnan Synthesis in Escherichia coli. Infect Immun. 2002;70: 2891–2898. doi: 10.1128/IAI.70.6.2891-2898.200212010977
    • (2002) Infect Immun , vol.70 , pp. 2891-2898
    • Shibata, Y.1    Yamashita, Y.2    Ozaki, K.3    Nakano, Y.4    Koga, T.5
  • 45
    • 1942438100 scopus 로고    scopus 로고
    • The O-antigen gene cluster of Shigella boydii O11 and functional identification of its wzy gene
    • 15109730,.;: –.
    • Tao J, Feng L, Guo H, Li Y, Wang L, The O-antigen gene cluster of Shigella boydii O11 and functional identification of its wzy gene. FEMS Microbiol Lett. 2004;234: 125–132. doi: 10.1111/j.1574-6968.2004.tb09523.x15109730
    • (2004) FEMS Microbiol Lett , vol.234 , pp. 125-132
    • Tao, J.1    Feng, L.2    Guo, H.3    Li, Y.4    Wang, L.5
  • 46
    • 23644437179 scopus 로고    scopus 로고
    • Structural and genetic characterization of the Shigella boydii type 18 O antigen
    • 16055280,..;: –.
    • Feng L, Senchenkova SN, Wang W, Shashkov AS, Liu B, Shevelev SD, et al. Structural and genetic characterization of the Shigella boydii type 18 O antigen. Gene. 2005;355: 79–86. doi: 10.1016/j.gene.2005.06.00116055280
    • (2005) Gene , vol.355 , pp. 79-86
    • Feng, L.1    Senchenkova, S.N.2    Wang, W.3    Shashkov, A.S.4    Liu, B.5    Shevelev, S.D.6
  • 47
    • 84897395541 scopus 로고    scopus 로고
    • Deep RNA Sequencing Reveals Hidden Features and Dynamics of Early Gene Transcription in Paramecium bursaria Chlorella Virus 1
    • 24608750,..;:.
    • Blanc G, Mozar M, Agarkova IV, Gurnon JR, Yanai-Balser G, Rowe JM, et al. Deep RNA Sequencing Reveals Hidden Features and Dynamics of Early Gene Transcription in Paramecium bursaria Chlorella Virus 1. PLOS ONE. 2014;9: e90989. doi: 10.1371/journal.pone.009098924608750
    • (2014) PLOS ONE , vol.9 , pp. e90989
    • Blanc, G.1    Mozar, M.2    Agarkova, I.V.3    Gurnon, J.R.4    Yanai-Balser, G.5    Rowe, J.M.6
  • 48
    • 38049134749 scopus 로고    scopus 로고
    • Differential Role of NADP+ and NADPH in the Activity and Structure of GDP-D-mannose 4,6-Dehydratase from Two Chlorella Viruses
    • 17974560,..;: –.
    • Fruscione F, Sturla L, Duncan G, Etten JLV, Valbuzzi P, Flora AD, et al. Differential Role of NADP+ and NADPH in the Activity and Structure of GDP-D-mannose 4,6-Dehydratase from Two Chlorella Viruses. J Biol Chem. 2008;283: 184–193. doi: 10.1074/jbc.M70661420017974560
    • (2008) J Biol Chem , vol.283 , pp. 184-193
    • Fruscione, F.1    Sturla, L.2    Duncan, G.3    Etten, J.L.V.4    Valbuzzi, P.5    Flora, A.D.6
  • 49
    • 0037821819 scopus 로고    scopus 로고
    • Paramecium bursaria chlorella virus 1 encodes two enzymes involved in the biosynthesis of GDP-L-fucose and GDP-D-rhamnose
    • 12679342,..;: –.
    • Tonetti M, Zanardi D, Gurnon JR, Fruscione F, Armirotti A, Damonte G, et al. Paramecium bursaria chlorella virus 1 encodes two enzymes involved in the biosynthesis of GDP-L-fucose and GDP-D-rhamnose. J Biol Chem. 2003;278: 21559–65. doi: 10.1074/jbc.M30154320012679342
    • (2003) J Biol Chem , vol.278 , pp. 21559-21565
    • Tonetti, M.1    Zanardi, D.2    Gurnon, J.R.3    Fruscione, F.4    Armirotti, A.5    Damonte, G.6
  • 50
    • 84882753233 scopus 로고    scopus 로고
    • Structure of N-linked oligosaccharides attached to chlorovirus PBCV-1 major capsid protein reveals unusual class of complex N-glycans
    • 23918378,..;: –.
    • De Castro CD, Molinaro A, Piacente F, Gurnon JR, Sturiale L, Palmigiano A, et al. Structure of N-linked oligosaccharides attached to chlorovirus PBCV-1 major capsid protein reveals unusual class of complex N-glycans. PNAS. 2013;110: 13956–13960. doi: 10.1073/pnas.131300511023918378
    • (2013) PNAS , vol.110 , pp. 13956-13960
    • De Castro, C.D.1    Molinaro, A.2    Piacente, F.3    Gurnon, J.R.4    Sturiale, L.5    Palmigiano, A.6
  • 51
    • 0028890824 scopus 로고
    • Pulsed field separation of large supercoiled and open-circular DNAs and its application to bacterial artificial chromosome cloning
    • 7737080,.;: –.
    • Wang M, Lai E, Pulsed field separation of large supercoiled and open-circular DNAs and its application to bacterial artificial chromosome cloning. Electrophoresis. 1995;16: 1–7. doi: 10.1002/elps.11501601027737080
    • (1995) Electrophoresis , vol.16 , pp. 1-7
    • Wang, M.1    Lai, E.2
  • 52
    • 54149103332 scopus 로고    scopus 로고
    • Clues about the Genetic Basis of Adaptation Emerge from Comparing the Proteomes of Two Ostreococcus Ecotypes (Chlorophyta, Prasinophyceae)
    • 18678753,.;: –.
    • Jancek S, Gourbiere S, Moreau H, Piganeau G, Clues about the Genetic Basis of Adaptation Emerge from Comparing the Proteomes of Two Ostreococcus Ecotypes (Chlorophyta, Prasinophyceae). Molecular Biology and Evolution. 2008;25: 2293–2300. doi: 10.1093/molbev/msn16818678753
    • (2008) Molecular Biology and Evolution , vol.25 , pp. 2293-2300
    • Jancek, S.1    Gourbiere, S.2    Moreau, H.3    Piganeau, G.4
  • 53
    • 85012095880 scopus 로고    scopus 로고
    • Notable Aspects of Glycan-Protein Interactions
    • 26340640,.;: –.
    • Cohen M, Notable Aspects of Glycan-Protein Interactions. Biomolecules. 2015;5: 2056–2072. doi: 10.3390/biom503205626340640
    • (2015) Biomolecules , vol.5 , pp. 2056-2072
    • Cohen, M.1
  • 54
    • 84930797241 scopus 로고    scopus 로고
    • Selection and Characterization of Phage-Resistant Mutant Strains of Listeria monocytogenes Reveal Host Genes Linked to Phage Adsorption
    • 25888172,.;: –.
    • Denes T, den Bakker HC, Tokman JI, Guldimann C, Wiedmann M, Selection and Characterization of Phage-Resistant Mutant Strains of Listeria monocytogenes Reveal Host Genes Linked to Phage Adsorption. Appl Environ Microbiol. 2015;81: 4295–4305. doi: 10.1128/AEM.00087-1525888172
    • (2015) Appl Environ Microbiol , vol.81 , pp. 4295-4305
    • Denes, T.1    den Bakker, H.C.2    Tokman, J.I.3    Guldimann, C.4    Wiedmann, M.5
  • 55
    • 84932193958 scopus 로고    scopus 로고
    • Bacteriophage predation promotes serovar diversification in Listeria monocytogenes
    • 25825127,..;: –.
    • Eugster MR, Morax LS, Hüls VJ, Huwiler SG, Leclercq A, Lecuit M, et al. Bacteriophage predation promotes serovar diversification in Listeria monocytogenes. Molecular Microbiology. 2015;97: 33–46. doi: 10.1111/mmi.1300925825127
    • (2015) Molecular Microbiology , vol.97 , pp. 33-46
    • Eugster, M.R.1    Morax, L.S.2    Hüls, V.J.3    Huwiler, S.G.4    Leclercq, A.5    Lecuit, M.6
  • 56
    • 0032994659 scopus 로고    scopus 로고
    • Antiviral Activities against HSV-1, HCMV, and HIV-1 of Rhamnan Sulphate from Monostroma latissimum
    • 10418331,.;: –.
    • Lee J-B, Hayashi K, Hayashi T, Sankawa U, Maeda M, Antiviral Activities against HSV-1, HCMV, and HIV-1 of Rhamnan Sulphate from Monostroma latissimum. Planta Medica. 1999;65: 439–441. doi: 10.1055/s-2006-96080410418331
    • (1999) Planta Medica , vol.65 , pp. 439-441
    • Lee, J.-B.1    Hayashi, K.2    Hayashi, T.3    Sankawa, U.4    Maeda, M.5
  • 57
    • 84922728689 scopus 로고    scopus 로고
    • Ferrets exclusively synthesize Neu5Ac and express naturally humanized influenza A virus receptors
    • 25517696,..;:.
    • Ng PSK, Böhm R, Hartley-Tassell LE, Steen JA, Wang H, Lukowski SW, et al. Ferrets exclusively synthesize Neu5Ac and express naturally humanized influenza A virus receptors. Nat Commun. 2014;5: 5750. doi: 10.1038/ncomms675025517696
    • (2014) Nat Commun , vol.5 , pp. 5750
    • Ng, P.S.K.1    Böhm, R.2    Hartley-Tassell, L.E.3    Steen, J.A.4    Wang, H.5    Lukowski, S.W.6
  • 58
    • 33750830688 scopus 로고    scopus 로고
    • Thrombocytopenia and kidney disease in mice with a mutation in the C1galt1 gene
    • 17062753,..;: –.
    • Alexander WS, Viney EM, Zhang J-G, Metcalf D, Kauppi M, Hyland CD, et al. Thrombocytopenia and kidney disease in mice with a mutation in the C1galt1 gene. PNAS. 2006;103: 16442–16447. doi: 10.1073/pnas.060787210317062753
    • (2006) PNAS , vol.103 , pp. 16442-16447
    • Alexander, W.S.1    Viney, E.M.2    Zhang, J.-G.3    Metcalf, D.4    Kauppi, M.5    Hyland, C.D.6
  • 59
    • 31044450556 scopus 로고    scopus 로고
    • Natural synchronisation for the study of cell division in the green unicellular alga Ostreococcus tauri
    • 16429264,.;: –.
    • Farinas B, Mary C, Manes CLD, Bhaud Y, Peaucellier G, Moreau H, Natural synchronisation for the study of cell division in the green unicellular alga Ostreococcus tauri. Plant Molecular Biology. 2006;60: 277–292. doi: 10.1007/s11103-005-4066-116429264
    • (2006) Plant Molecular Biology , vol.60 , pp. 277-292
    • Farinas, B.1    Mary, C.2    Manes, C.L.D.3    Bhaud, Y.4    Peaucellier, G.5    Moreau, H.6
  • 61
    • 0034755086 scopus 로고    scopus 로고
    • The mobility of the tobacco Tnt1 retrotransposon correlates with its transcriptional activation by fungal factors
    • 11722759,.;: –.
    • Melayah D, Bonnivard E, Chalhoub B, Audeon C, Grandbastien M-A, The mobility of the tobacco Tnt1 retrotransposon correlates with its transcriptional activation by fungal factors. Plant J. 2001;28: 159–168. doi: 10.1046/j.1365-313X.2001.01141.x11722759
    • (2001) Plant J , vol.28 , pp. 159-168
    • Melayah, D.1    Bonnivard, E.2    Chalhoub, B.3    Audeon, C.4    Grandbastien, M.-A.5
  • 62
    • 85028162396 scopus 로고    scopus 로고
    • LTR retrotransposons, handy hitchhikers of plant regulation and stress response
    • 25086340,.;: –.
    • Grandbastien M-A, LTR retrotransposons, handy hitchhikers of plant regulation and stress response. Biochimica et Biophysica Acta (BBA)—Gene Regulatory Mechanisms. 2015;1849: 403–416. doi: 10.1016/j.bbagrm.2014.07.01725086340
    • (2015) Biochimica et Biophysica Acta (BBA)—Gene Regulatory Mechanisms , vol.1849 , pp. 403-416
    • Grandbastien, M.-A.1
  • 64
    • 84908179047 scopus 로고    scopus 로고
    • Epigenetic memory in plants
    • 25104823,.;: –.
    • Iwasaki M, Paszkowski J, Epigenetic memory in plants. The EMBO Journal. 2014;33: 1987–1998. doi: 10.15252/embj.20148888325104823
    • (2014) The EMBO Journal , vol.33 , pp. 1987-1998
    • Iwasaki, M.1    Paszkowski, J.2
  • 65
    • 0037633476 scopus 로고    scopus 로고
    • Plant LTR-retrotransposons and MITEs: control of transposition and impact on the evolution of plant genes and genomes
    • 12853133,.;: –.
    • Casacuberta JM, Santiago N, Plant LTR-retrotransposons and MITEs: control of transposition and impact on the evolution of plant genes and genomes. Gene. 2003;311: 1–11. doi: 10.1016/S0378-1119(03)00557-212853133
    • (2003) Gene , vol.311 , pp. 1-11
    • Casacuberta, J.M.1    Santiago, N.2
  • 66
    • 84948397541 scopus 로고    scopus 로고
    • Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages
    • 26613339,..;
    • Lescot M, Hingamp P, Kojima KK, Villar E, Romac S, Veluchamy A, et al. Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages. ISME J. 2015; doi: 10.1038/ismej.2015.19226613339
    • (2015) ISME J
    • Lescot, M.1    Hingamp, P.2    Kojima, K.K.3    Villar, E.4    Romac, S.5    Veluchamy, A.6
  • 67
    • 79953746026 scopus 로고    scopus 로고
    • An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress
    • 21399627,.;: –.
    • Ito H, Gaubert H, Bucher E, Mirouze M, Vaillant I, Paszkowski J, An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress. Nature. 2011;472: 115–119. doi: 10.1038/nature0986121399627
    • (2011) Nature , vol.472 , pp. 115-119
    • Ito, H.1    Gaubert, H.2    Bucher, E.3    Mirouze, M.4    Vaillant, I.5    Paszkowski, J.6
  • 68
    • 84864679478 scopus 로고    scopus 로고
    • Widespread dynamic DNA methylation in response to biotic stress
    • 22733782,..;: –.
    • Dowen RH, Pelizzola M, Schmitz RJ, Lister R, Dowen JM, Nery JR, et al. Widespread dynamic DNA methylation in response to biotic stress. PNAS. 2012;109: E2183–E2191. doi: 10.1073/pnas.120932910922733782
    • (2012) PNAS , vol.109 , pp. E2183-E2191
    • Dowen, R.H.1    Pelizzola, M.2    Schmitz, R.J.3    Lister, R.4    Dowen, J.M.5    Nery, J.R.6
  • 69
    • 84896324622 scopus 로고    scopus 로고
    • Dnmt1-Independent CG Methylation Contributes to Nucleosome Positioning in Diverse Eukaryotes
    • 24630728,.;: –.
    • Huff JT, Zilberman D, Dnmt1-Independent CG Methylation Contributes to Nucleosome Positioning in Diverse Eukaryotes. Cell. 2014;156: 1286–1297. doi: 10.1016/j.cell.2014.01.02924630728
    • (2014) Cell , vol.156 , pp. 1286-1297
    • Huff, J.T.1    Zilberman, D.2
  • 70
    • 77249170184 scopus 로고    scopus 로고
    • Establishing, maintaining and modifying DNA methylation patterns in plants and animals
    • 20142834,.;: –.
    • Law JA, Jacobsen SE, Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet. 2010;11: 204–220. doi: 10.1038/nrg271920142834
    • (2010) Nat Rev Genet , vol.11 , pp. 204-220
    • Law, J.A.1    Jacobsen, S.E.2
  • 71
    • 84962449788 scopus 로고    scopus 로고
    • Mariner Transposons Contain a Silencer: Possible Role of the Polycomb Repressive Complex 2
    • 26939020,..;:.
    • Bire S, Casteret S, Piégu B, Beauclair L, Moiré N, Arensbuger P, et al. Mariner Transposons Contain a Silencer: Possible Role of the Polycomb Repressive Complex 2. PLOS Genet. 2016;12: e1005902. doi: 10.1371/journal.pgen.100590226939020
    • (2016) PLOS Genet , vol.12 , pp. e1005902
    • Bire, S.1    Casteret, S.2    Piégu, B.3    Beauclair, L.4    Moiré, N.5    Arensbuger, P.6
  • 72
    • 85047671736 scopus 로고    scopus 로고
    • The SANT domain: a putative DNA-binding domain in the SWI-SNF and ADA complexes, the transcriptional corepressor N-CoR and TFIIIB
    • 8882580,.;: –.
    • Aasland R, Francis Stewart A, Gibson T, The SANT domain: a putative DNA-binding domain in the SWI-SNF and ADA complexes, the transcriptional corepressor N-CoR and TFIIIB. Trends Biochem Sci. 1996;21: 87–88. doi: 10.1016/S0968-0004(96)30009-18882580
    • (1996) Trends Biochem Sci , vol.21 , pp. 87-88
    • Aasland, R.1    Francis Stewart, A.2    Gibson, T.3
  • 73
    • 0035967858 scopus 로고    scopus 로고
    • The RNA polymerase III transcription apparatus
    • 11419933,.;: –.
    • Geiduschek EP, Kassavetis GA, The RNA polymerase III transcription apparatus. J Molec Biol. 2001;310: 1–26. doi: 10.1006/jmbi.2001.473211419933
    • (2001) J Molec Biol , vol.310 , pp. 1-26
    • Geiduschek, E.P.1    Kassavetis, G.A.2
  • 74
    • 79959842126 scopus 로고    scopus 로고
    • Genomic island variability facilitates Prochlorococcus–virus coexistence
    • 21720364,.;: –.
    • Avrani S, Wurtzel O, Sharon I, Sorek R, Lindell D, Genomic island variability facilitates Prochlorococcus–virus coexistence. Nature. 2011;474: 604–608. doi: 10.1038/nature1017221720364
    • (2011) Nature , vol.474 , pp. 604-608
    • Avrani, S.1    Wurtzel, O.2    Sharon, I.3    Sorek, R.4    Lindell, D.5
  • 75
    • 84969245534 scopus 로고    scopus 로고
    • The Phage-Inducible Chromosomal Islands: A Family of Highly Evolved Molecular Parasites
    • 26958912,.;: –.
    • Penadés JR, Christie GE, The Phage-Inducible Chromosomal Islands: A Family of Highly Evolved Molecular Parasites. Annu Rev Virol. 2015;2: 181–201. doi: 10.1146/annurev-virology-031413-08544626958912
    • (2015) Annu Rev Virol , vol.2 , pp. 181-201
    • Penadés, J.R.1    Christie, G.E.2
  • 76
    • 79961171580 scopus 로고    scopus 로고
    • Pathogenomics of fungal plant parasites: what have we learnt about pathogenesis?
    • 21458359,.;: –.
    • Schmidt SM, Panstruga R, Pathogenomics of fungal plant parasites: what have we learnt about pathogenesis?Curr Opin Plant Biol. 2011;14: 392–399. doi: 10.1016/j.pbi.2011.03.00621458359
    • (2011) Curr Opin Plant Biol , vol.14 , pp. 392-399
    • Schmidt, S.M.1    Panstruga, R.2
  • 77
    • 0035112081 scopus 로고    scopus 로고
    • Genes determining pathogenicity to pea are clustered on a supernumerary chromosome in the fungal plant pathogen Nectria haematococca
    • 11208022,.;: –.
    • Han Y, Liu X, Benny U, Kistler HC, VanEtten HD, Genes determining pathogenicity to pea are clustered on a supernumerary chromosome in the fungal plant pathogen Nectria haematococca. The Plant Journal. 2001;25: 305–314. doi: 10.1046/j.1365-313x.2001.00969.x11208022
    • (2001) The Plant Journal , vol.25 , pp. 305-314
    • Han, Y.1    Liu, X.2    Benny, U.3    Kistler, H.C.4    VanEtten, H.D.5
  • 78
    • 77949714038 scopus 로고    scopus 로고
    • Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
    • 20237561,..;: –.
    • Ma L-J, van der Does HC, Borkovich KA, Coleman JJ, Daboussi M-J, Di Pietro A, et al. Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature. 2010;464: 367–373. doi: 10.1038/nature0885020237561
    • (2010) Nature , vol.464 , pp. 367-373
    • Ma, L.-J.1    van der Does, H.C.2    Borkovich, K.A.3    Coleman, J.J.4    Daboussi, M.-J.5    Di Pietro, A.6
  • 79
    • 84926205298 scopus 로고    scopus 로고
    • RNA-mediated epigenetic regulation of gene expression
    • 25554358,.;: –.
    • Holoch D, Moazed D, RNA-mediated epigenetic regulation of gene expression. Nat Rev Genet. 2015;16: 71–84. doi: 10.1038/nrg386325554358
    • (2015) Nat Rev Genet , vol.16 , pp. 71-84
    • Holoch, D.1    Moazed, D.2
  • 80
    • 84892974070 scopus 로고    scopus 로고
    • Small RNAs and heritable epigenetic variation in plants
    • 24012194,.;: –.
    • Bond DM, Baulcombe DC, Small RNAs and heritable epigenetic variation in plants. Trends Cell Biol. 2014;24: 100–107. doi: 10.1016/j.tcb.2013.08.00124012194
    • (2014) Trends Cell Biol , vol.24 , pp. 100-107
    • Bond, D.M.1    Baulcombe, D.C.2
  • 81
    • 80052388966 scopus 로고    scopus 로고
    • RNA-Mediated Silencing in Algae: Biological Roles and Tools for Analysis of Gene Function
    • 21803865,.;: –.
    • Cerutti H, Ma X, Msanne J, Repas T, RNA-Mediated Silencing in Algae: Biological Roles and Tools for Analysis of Gene Function. Eukaryotic Cell. 2011;10: 1164–1172. doi: 10.1128/EC.05106-1121803865
    • (2011) Eukaryotic Cell , vol.10 , pp. 1164-1172
    • Cerutti, H.1    Ma, X.2    Msanne, J.3    Repas, T.4
  • 82
    • 84904997234 scopus 로고    scopus 로고
    • Implications of streamlining theory for microbial ecology
    • 24739623,.;: –.
    • Giovannoni SJ, Cameron Thrash J, Temperton B, Implications of streamlining theory for microbial ecology. ISME J. 2014;8: 1553–1565. doi: 10.1038/ismej.2014.6024739623
    • (2014) ISME J , vol.8 , pp. 1553-1565
    • Giovannoni, S.J.1    Cameron Thrash, J.2    Temperton, B.3
  • 83
    • 84891038099 scopus 로고    scopus 로고
    • RNAi function, diversity, and loss in the fungal kingdom
    • 24173579,.;: –.
    • Billmyre RB, Calo S, Feretzaki M, Wang X, Heitman J, RNAi function, diversity, and loss in the fungal kingdom. Chromosome Res. 2013;21: 561–572. doi: 10.1007/s10577-013-9388-224173579
    • (2013) Chromosome Res , vol.21 , pp. 561-572
    • Billmyre, R.B.1    Calo, S.2    Feretzaki, M.3    Wang, X.4    Heitman, J.5
  • 84
    • 84908282485 scopus 로고    scopus 로고
    • Prasinovirus distribution in the Northwest Mediterranean Sea is affected by the environment and particularly by phosphate availability
    • 25109909,..;: –.
    • Clerissi C, Grimsley N, Subirana L, Maria E, Oriol L, Ogata H, et al. Prasinovirus distribution in the Northwest Mediterranean Sea is affected by the environment and particularly by phosphate availability. Virology. 2014;466–467: 146–157. doi: 10.1016/j.virol.2014.07.01625109909
    • (2014) Virology , vol.466-467 , pp. 146-157
    • Clerissi, C.1    Grimsley, N.2    Subirana, L.3    Maria, E.4    Oriol, L.5    Ogata, H.6
  • 85
    • 84945486830 scopus 로고    scopus 로고
    • Interplay between the genetic clades of Micromonas and their viruses in the Western English Channel
    • 26081716,..;: –.
    • Baudoux A-C, Lebredonchel H, Dehmer H, Latimier M, Edern R, Rigaut-Jalabert F, et al. Interplay between the genetic clades of Micromonas and their viruses in the Western English Channel. Environ Microbiol Rep. 2015;7: 765–773. doi: 10.1111/1758-2229.1230926081716
    • (2015) Environ Microbiol Rep , vol.7 , pp. 765-773
    • Baudoux, A.-C.1    Lebredonchel, H.2    Dehmer, H.3    Latimier, M.4    Edern, R.5    Rigaut-Jalabert, F.6
  • 86
    • 11844269109 scopus 로고    scopus 로고
    • The Roscoff Culture Collection (RCC): a collection dedicated to marine picoplankton
    • Vaulot D, Le Gall F, Marie D, Guillou L, Partensky F, The Roscoff Culture Collection (RCC): a collection dedicated to marine picoplankton. Nova Hedwigia. 2004;79: 49–70.
    • (2004) Nova Hedwigia , vol.79 , pp. 49-70
    • Vaulot, D.1    Le Gall, F.2    Marie, D.3    Guillou, L.4    Partensky, F.5
  • 87
    • 84863507534 scopus 로고    scopus 로고
    • Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
    • 22543367,..;: –.
    • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, et al. Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 2012;28: 1647–1649. doi: 10.1093/bioinformatics/bts19922543367
    • (2012) Bioinformatics , vol.28 , pp. 1647-1649
    • Kearse, M.1    Moir, R.2    Wilson, A.3    Stones-Havas, S.4    Cheung, M.5    Sturrock, S.6
  • 88
    • 84992689146 scopus 로고    scopus 로고
    • Geneious—Home page [Internet]. [cited 10 May 2016].
    • Geneious—Home page [Internet]. [cited 10 May 2016]. http://www.geneious.com/
  • 89
    • 72649098887 scopus 로고    scopus 로고
    • Cryptic Sex in the Smallest Eukaryotic Marine Green Alga
    • 19734297,.;: –.
    • Grimsley N, Pequin B, Bachy C, Moreau H, Piganeau G, Cryptic Sex in the Smallest Eukaryotic Marine Green Alga. Molec Biol Evol. 2010;27: 47–54. doi: 10.1093/molbev/msp20319734297
    • (2010) Molec Biol Evol , vol.27 , pp. 47-54
    • Grimsley, N.1    Pequin, B.2    Bachy, C.3    Moreau, H.4    Piganeau, G.5
  • 90
    • 84992741243 scopus 로고    scopus 로고
    • Babraham Bioinformatics—FastQC A Quality Control tool for High Throughput Sequence Data [Internet]. [cited 10 May 2016].
    • Babraham Bioinformatics—FastQC A Quality Control tool for High Throughput Sequence Data [Internet]. [cited 10 May 2016]. http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
  • 91
    • 84876996918 scopus 로고    scopus 로고
    • TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
    • 23618408,.;:.
    • Kim D, Pertea G, Trapnell C, Pimentel H, Kelley R, Salzberg SL, TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biology. 2013;14: R36. doi: 10.1186/gb-2013-14-4-r3623618408
    • (2013) Genome Biology , vol.14 , pp. R36
    • Kim, D.1    Pertea, G.2    Trapnell, C.3    Pimentel, H.4    Kelley, R.5    Salzberg, S.L.6
  • 92
    • 84928987900 scopus 로고    scopus 로고
    • HTSeq—a Python framework to work with high-throughput sequencing data
    • 25260700,.;: –.
    • Anders S, Pyl PT, Huber W, HTSeq—a Python framework to work with high-throughput sequencing data. Bioinformatics. 2015;31: 166–169. doi: 10.1093/bioinformatics/btu63825260700
    • (2015) Bioinformatics , vol.31 , pp. 166-169
    • Anders, S.1    Pyl, P.T.2    Huber, W.3
  • 93
    • 84924629414 scopus 로고    scopus 로고
    • Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
    • 25516281,.;: –.
    • Love MI, Huber W, Anders S, Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 2014;15: 1–21. doi: 10.1186/s13059-014-0550-825516281
    • (2014) Genome Biol , vol.15 , pp. 1-21
    • Love, M.I.1    Huber, W.2    Anders, S.3
  • 94
    • 18944386568 scopus 로고    scopus 로고
    • Ecotype diversity in the marine picoeukaryote Ostreococcus (Chlorophyta, Prasinophyceae)
    • 15892704,.;: –.
    • Rodriguez F, Derelle E, Guillou L, Le Gall F, Vaulot D, Moreau H, Ecotype diversity in the marine picoeukaryote Ostreococcus (Chlorophyta, Prasinophyceae). Environ Microbiol. 2005;7: 853–859. doi: 10.1111/j.1462-2920.2005.00758.x15892704
    • (2005) Environ Microbiol , vol.7 , pp. 853-859
    • Rodriguez, F.1    Derelle, E.2    Guillou, L.3    Le Gall, F.4    Vaulot, D.5    Moreau, H.6
  • 95
    • 84992745292 scopus 로고    scopus 로고
    • ORCAE: Online Resource for Community Annotation of Eukaryotes [Internet]. [cited 10 May 2016].
    • ORCAE: Online Resource for Community Annotation of Eukaryotes [Internet]. [cited 10 May 2016]. http://bioinformatics.psb.ugent.be/orcae/overview/OsttaV2
  • 96
    • 84869065441 scopus 로고    scopus 로고
    • ORCAE: online resource for community annotation of eukaryotes
    • 23132114,.;: –.
    • Sterck L, Billiau K, Abeel T, Rouzé P, Van de Peer Y, ORCAE: online resource for community annotation of eukaryotes. Nat Meth. 2012;9: 1041–1041. doi: 10.1038/nmeth.224223132114
    • (2012) Nat Meth , vol.9 , pp. 1041
    • Sterck, L.1    Billiau, K.2    Abeel, T.3    Rouzé, P.4    Van de Peer, Y.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.