메뉴 건너뛰기




Volumn 355, Issue 1-2, 2005, Pages 79-86

Structural and genetic characterization of the Shigella boydii type 18 O antigen

Author keywords

O antigen gene cluster; O polysaccharide structure

Indexed keywords

BACTERIAL ANTIGEN; GALACTURONIC ACID; N ACETYLGALACTOSAMINE; O ANTIGEN; PENTASACCHARIDE; RHAMNOSE; SUGAR;

EID: 23644437179     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2005.06.001     Document Type: Article
Times cited : (25)

References (33)
  • 1
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • S.F. Altschul Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 25 1997 3398 3402
    • (1997) Nucleic Acids Res. , vol.25 , pp. 3398-3402
    • Altschul, S.F.1
  • 2
    • 0028818689 scopus 로고
    • Sequence and analysis of the O antigen gene (rfb) cluster of Escherichia coli O111
    • D.A. Bastin, and P.R. Reeves Sequence and analysis of the O antigen gene (rfb) cluster of Escherichia coli O111 Gene 164 1995 17 23
    • (1995) Gene , vol.164 , pp. 17-23
    • Bastin, D.A.1    Reeves, P.R.2
  • 3
    • 0011542799 scopus 로고    scopus 로고
    • The Pfam protein families database
    • A. Bateman The Pfam protein families database Nucleic Acids Res. 30 2002 276 280
    • (2002) Nucleic Acids Res. , vol.30 , pp. 276-280
    • Bateman, A.1
  • 4
    • 34547130099 scopus 로고
    • Carbon-13 nuclear magnetic resonance spectroscopy of monosaccharides
    • K. Bock, and C. Pedersen Carbon-13 nuclear magnetic resonance spectroscopy of monosaccharides Adv. Carbohydr. Chem. Biochem. 41 1983 27 65
    • (1983) Adv. Carbohydr. Chem. Biochem. , vol.41 , pp. 27-65
    • Bock, K.1    Pedersen, C.2
  • 5
    • 0031745263 scopus 로고    scopus 로고
    • Overexpression and topology of the Shigella flexneri O-antigen polymerase (Rfc/Wzy)
    • C. Daniels, C. Vindurampulle, and R. Morona Overexpression and topology of the Shigella flexneri O-antigen polymerase (Rfc/Wzy) Mol. Microbiol. 28 1998 1211 1222
    • (1998) Mol. Microbiol. , vol.28 , pp. 1211-1222
    • Daniels, C.1    Vindurampulle, C.2    Morona, R.3
  • 6
    • 9144269721 scopus 로고    scopus 로고
    • Structural and genetic characterization of the Shigella boydii type 13 O antigen
    • L. Feng Structural and genetic characterization of the Shigella boydii type 13 O antigen J. Bacteriol. 182 2004 383 392
    • (2004) J. Bacteriol. , vol.182 , pp. 383-392
    • Feng, L.1
  • 7
    • 0346848883 scopus 로고    scopus 로고
    • Structure of the Shigella dysenteriae 7 O antigen gene cluster and identification of its antigen specific genes
    • L. Feng Structure of the Shigella dysenteriae 7 O antigen gene cluster and identification of its antigen specific genes Microb. Pathog. 36 2004 109 115
    • (2004) Microb. Pathog. , vol.36 , pp. 109-115
    • Feng, L.1
  • 8
    • 77955764774 scopus 로고
    • A rapid permethylation of glycolipids and polysaccharides catalyzed by methylsulfonyl carbon ion in dimethylsulfoxide
    • S.I. Hakomori A rapid permethylation of glycolipids and polysaccharides catalyzed by methylsulfonyl carbon ion in dimethylsulfoxide J. Biochem. 55 1964 205 208
    • (1964) J. Biochem. , vol.55 , pp. 205-208
    • Hakomori, S.I.1
  • 9
    • 0028825276 scopus 로고
    • Automated construction and graphical presentation of protein blocks from unaligned sequences
    • S. Henikoff, J.G. Henikoff, W.J. Alford, and S. Pietrokovski Automated construction and graphical presentation of protein blocks from unaligned sequences Gene 163 1995 GC17 GC26
    • (1995) Gene , vol.163
    • Henikoff, S.1    Henikoff, J.G.2    Alford, W.J.3    Pietrokovski, S.4
  • 10
    • 0011643588 scopus 로고
    • Determination of the absolute configuration of sugars by gas-liquid chromatography of their acetylated 2-octyl glycosides
    • K. Leontein, and J. Lönngren Determination of the absolute configuration of sugars by gas-liquid chromatography of their acetylated 2-octyl glycosides Methods Carbohydr. Chem. 9 1993 87 89
    • (1993) Methods Carbohydr. Chem. , vol.9 , pp. 87-89
    • Leontein, K.1    Lönngren, J.2
  • 12
    • 0029998771 scopus 로고    scopus 로고
    • An O-antigen processing function for Wzx(RfbX): A promising candidate for O-unit flippase
    • D. Liu, R. Cole, and P.R. Reeves An O-antigen processing function for Wzx(RfbX): a promising candidate for O-unit flippase J. Bacteriol. 178 1996 2102 2107
    • (1996) J. Bacteriol. , vol.178 , pp. 2102-2107
    • Liu, D.1    Cole, R.2    Reeves, P.R.3
  • 13
    • 0028839437 scopus 로고
    • Lipopolysaccharide with an altered O-antigen produced in Escherichia coli K-12 harbouring mutated, cloned Shigella flexneri rfb genes
    • R. Morona, D.F. Macpherson, L. Vandenbosch, N.I.A. Carlin, and P.A. Manning Lipopolysaccharide with an altered O-antigen produced in Escherichia coli K-12 harbouring mutated, cloned Shigella flexneri rfb genes Mol. Microbiol. 18 1995 209 223
    • (1995) Mol. Microbiol. , vol.18 , pp. 209-223
    • Morona, R.1    MacPherson, D.F.2    Vandenbosch, L.3    Carlin, N.I.A.4    Manning, P.A.5
  • 14
    • 0032708781 scopus 로고    scopus 로고
    • Molecular characterization of the locus encoding biosynthesis of the lipopolysaccharide O antigen of Escherichia coli serotype O113
    • A.W. Paton, and J.C. Paton Molecular characterization of the locus encoding biosynthesis of the lipopolysaccharide O antigen of Escherichia coli serotype O113 Infect. Immun. 67 1999 5930 5937
    • (1999) Infect. Immun. , vol.67 , pp. 5930-5937
    • Paton, A.W.1    Paton, J.C.2
  • 15
    • 0034641731 scopus 로고    scopus 로고
    • Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics
    • G.M. Pupo, R. Lan, and P.R. Reeves Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics Proc. Natl. Acad. Sci. 97 2000 10567 10572
    • (2000) Proc. Natl. Acad. Sci. , vol.97 , pp. 10567-10572
    • Pupo, G.M.1    Lan, R.2    Reeves, P.R.3
  • 16
    • 0027255391 scopus 로고
    • Bacterial endotoxins: Extraordinary lipids that activate eucaryotic signal transduction
    • C.R.H. Raetz Bacterial endotoxins: extraordinary lipids that activate eucaryotic signal transduction J. Bacteriol. 175 1993 5745 5753
    • (1993) J. Bacteriol. , vol.175 , pp. 5745-5753
    • Raetz, C.R.H.1
  • 18
    • 0005776718 scopus 로고
    • Studies on the chemical basis of the phage conversion of O-antigens in the E-group Salmonella
    • P.W. Robbins, and T. Uchida Studies on the chemical basis of the phage conversion of O-antigens in the E-group Salmonella Biochemistry 1 1962 323 335
    • (1962) Biochemistry , vol.1 , pp. 323-335
    • Robbins, P.W.1    Uchida, T.2
  • 19
    • 0031746603 scopus 로고    scopus 로고
    • Three rhamnosyltransferases responsible for assembly of the A-band d-rhamnan polysaccharide in Pseudomonas aeruginosa: A fourth transferase, WbpL, is required for the initiation of both A-band and B-band lipopolysaccharide synthesis
    • H.L. Rocchetta, L.L. Burrows, J.C. Pacan, and J.S. Lam Three rhamnosyltransferases responsible for assembly of the A-band d-rhamnan polysaccharide in Pseudomonas aeruginosa: a fourth transferase, WbpL, is required for the initiation of both A-band and B-band lipopolysaccharide synthesis Mol. Microbiol. 28 1998 1103 1119
    • (1998) Mol. Microbiol. , vol.28 , pp. 1103-1119
    • Rocchetta, H.L.1    Burrows, L.L.2    Pacan, J.C.3    Lam, J.S.4
  • 20
    • 0033635022 scopus 로고    scopus 로고
    • Artemis: Sequence visualisation and annotation
    • K. Rutherford Artemis: sequence visualisation and annotation Bioinformatics 16 2000 944 945
    • (2000) Bioinformatics , vol.16 , pp. 944-945
    • Rutherford, K.1
  • 21
    • 0345097432 scopus 로고    scopus 로고
    • Biosynthesis of O-antigens: Genes and pathways involved in nucleotide sugar precursor synthesis and O-antigen assembly
    • G. Samuel, and P. Reeves Biosynthesis of O-antigens: genes and pathways involved in nucleotide sugar precursor synthesis and O-antigen assembly Carbohydr. Res. 338 2003 2503 2519
    • (2003) Carbohydr. Res. , vol.338 , pp. 2503-2519
    • Samuel, G.1    Reeves, P.2
  • 22
    • 33947488027 scopus 로고
    • Quantitative determination of monosaccharides as their alditol acetates by gas liquid chromatography
    • J.S. Sawardeker, J.H. Sloneker, and A. Jeanes Quantitative determination of monosaccharides as their alditol acetates by gas liquid chromatography Anal. Chem. 37 1965 1602 1603
    • (1965) Anal. Chem. , vol.37 , pp. 1602-1603
    • Sawardeker, J.S.1    Sloneker, J.H.2    Jeanes, A.3
  • 23
    • 0030158571 scopus 로고    scopus 로고
    • The Staden Sequence Analysis Package
    • R. Staden The Staden Sequence Analysis Package Mol. Biotechnol. 5 1996 233 241
    • (1996) Mol. Biotechnol. , vol.5 , pp. 233-241
    • Staden, R.1
  • 24
    • 0035162592 scopus 로고    scopus 로고
    • The COG database: New developments in phylogenetic classification of proteins from complete genomes
    • R.L. Tatusov The COG database: new developments in phylogenetic classification of proteins from complete genomes Nucleic Acids Res. 29 2001 22 28
    • (2001) Nucleic Acids Res. , vol.29 , pp. 22-28
    • Tatusov, R.L.1
  • 25
    • 0027968068 scopus 로고
    • CLUSTAL W-Impoving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
    • J.D. Thompson, D.G. Higgins, and T.J. Gibson CLUSTAL W-Impoving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice Nucleic Acids Res. 22 1994 4673 4680
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 26
    • 0036235620 scopus 로고    scopus 로고
    • The O-antigen gene cluster of Escherichia coli O55:H7 and identification of a new UDP-GlcNAc C4 epimerase gene
    • L. Wang The O-antigen gene cluster of Escherichia coli O55:H7 and identification of a new UDP-GlcNAc C4 epimerase gene J. Bacteriol. 184 2002 2620 2625
    • (2002) J. Bacteriol. , vol.184 , pp. 2620-2625
    • Wang, L.1
  • 27
    • 0031824601 scopus 로고    scopus 로고
    • Organization of Escherichia coli O157 O antigen gene cluster and identification of its specific genes
    • L. Wang, and P.R. Reeves Organization of Escherichia coli O157 O antigen gene cluster and identification of its specific genes Infect. Immun. 66 1998 3545 3551
    • (1998) Infect. Immun. , vol.66 , pp. 3545-3551
    • Wang, L.1    Reeves, P.R.2
  • 28
    • 0035972864 scopus 로고    scopus 로고
    • Sequence of the E. coli O104 antigen gene cluster and identification of O104 specific genes
    • L. Wang, C.E. Briggs, D. Rothemund, P. Fratamico, J.B. Luchansky, and P.R. Reeves Sequence of the E. coli O104 antigen gene cluster and identification of O104 specific genes Gene 270 2001 231 236
    • (2001) Gene , vol.270 , pp. 231-236
    • Wang, L.1    Briggs, C.E.2    Rothemund, D.3    Fratamico, P.4    Luchansky, J.B.5    Reeves, P.R.6
  • 29
    • 0034778552 scopus 로고    scopus 로고
    • Sequence analysis of four Shigella boydii O-antigen loci: Implication for Escherichia coli and Shigella relationships
    • L. Wang, W. Qu, and P.R. Reeves Sequence analysis of four Shigella boydii O-antigen loci: implication for Escherichia coli and Shigella relationships Infect. Immun. 69 2001 6923 6930
    • (2001) Infect. Immun. , vol.69 , pp. 6923-6930
    • Wang, L.1    Qu, W.2    Reeves, P.R.3
  • 30
    • 0002447206 scopus 로고
    • Bacterial lipopolysaccharides. Extraction with phenol-water and further applications of the procedure
    • O. Westphal, and K. Jann Bacterial lipopolysaccharides. Extraction with phenol-water and further applications of the procedure Methods Carbohydr. Chem. 5 1965 83 91
    • (1965) Methods Carbohydr. Chem. , vol.5 , pp. 83-91
    • Westphal, O.1    Jann, K.2
  • 31
    • 0028321452 scopus 로고
    • Molecular analysis of the rfb gene cluster of a group D2 Salmonella enterica strain: Evidence for its origin from an insertion sequence-mediated recombination event between group e and D1 strains
    • S.H. Xiang, M. Hobbs, and P.R. Reeves Molecular analysis of the rfb gene cluster of a group D2 Salmonella enterica strain: evidence for its origin from an insertion sequence-mediated recombination event between group E and D1 strains J. Bacteriol. 176 1994 4357 4365
    • (1994) J. Bacteriol. , vol.176 , pp. 4357-4365
    • Xiang, S.H.1    Hobbs, M.2    Reeves, P.R.3
  • 32
    • 0027280507 scopus 로고
    • Rhs elements of Escherichia coli K-12: Complex composites of shared and unique components that have different evolutionary histories
    • S. Zhao, C.H. Sandt, G. Feulner, D.A. Vlazny, J.A. Gray, and C.W. Hill Rhs elements of Escherichia coli K-12: complex composites of shared and unique components that have different evolutionary histories J. Bacteriol. 175 1993 2799 2808
    • (1993) J. Bacteriol. , vol.175 , pp. 2799-2808
    • Zhao, S.1    Sandt, C.H.2    Feulner, G.3    Vlazny, D.A.4    Gray, J.A.5    Hill, C.W.6
  • 33
    • 0034826182 scopus 로고    scopus 로고
    • Structure of the O-specific polysaccharide of Proteus mirabilis D52 and typing of this strain to Proteus serogroup O33
    • K. Zych Structure of the O-specific polysaccharide of Proteus mirabilis D52 and typing of this strain to Proteus serogroup O33 Eur. J. Biochem. 268 2001 4346 4351
    • (2001) Eur. J. Biochem. , vol.268 , pp. 4346-4351
    • Zych, K.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.