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Volumn 6, Issue 3, 2016, Pages

Network structure, metadata, and the prediction of missing nodes and annotations

Author keywords

[No Author keywords available]

Indexed keywords

FORECASTING; POPULATION DYNAMICS;

EID: 84992623354     PISSN: None     EISSN: 21603308     Source Type: Journal    
DOI: 10.1103/PhysRevX.6.031038     Document Type: Article
Times cited : (103)

References (71)
  • 1
    • 74049087026 scopus 로고    scopus 로고
    • Community Detection in Graphs
    • S. Fortunato, Community Detection in Graphs, Phys. Rep. 486, 75 (2010).
    • (2010) Phys. Rep , vol.486 , pp. 75
    • Fortunato, S.1
  • 3
    • 84255196314 scopus 로고    scopus 로고
    • Communities, Modules and Large-Scale Structure in Networks
    • M. E. J. Newman, Communities, Modules and Large-Scale Structure in Networks, Nat. Phys. 8, 25 (2011).
    • (2011) Nat. Phys , vol.8 , pp. 25
    • Newman, M.E.J.1
  • 7
    • 84918499937 scopus 로고    scopus 로고
    • Community Detection in Networks: Structural Clusters versus Ground Truth
    • D. Hric, R. K. Darst, and S. Fortunato, Community Detection in Networks: Structural Clusters versus Ground Truth, Phys. Rev. E 90, 062805 (2014).
    • (2014) Phys. Rev. E , vol.90
    • Hric, D.1    Darst, R.K.2    Fortunato, S.3
  • 8
    • 84944810998 scopus 로고    scopus 로고
    • Inferring the Mesoscale Structure of Layered, Edge-Valued, and Time-Varying Networks
    • T. P. Peixoto, Inferring the Mesoscale Structure of Layered, Edge-Valued, and Time-Varying Networks, Phys. Rev. E 92, 042807 (2015).
    • (2015) Phys. Rev. E , vol.92
    • Peixoto, T.P.1
  • 10
    • 84961371580 scopus 로고    scopus 로고
    • Learning Latent Block Structure in Weighted Networks
    • C. Aicher, A. Z. Jacobs, and A. Clauset, Learning Latent Block Structure in Weighted Networks, J. Complex Netw. 3, 221 (2015).
    • (2015) J. Complex Netw , vol.3 , pp. 221
    • Aicher, C.1    Jacobs, A.Z.2    Clauset, A.3
  • 11
    • 84984885319 scopus 로고    scopus 로고
    • Multilayer Stochastic Block Models Reveal the Multilayer Structure of Complex Networks
    • T. Vallés-Catalè, F. A. Massucci, R. Guimerà, and M. Sales-Pardo, Multilayer Stochastic Block Models Reveal the Multilayer Structure of Complex Networks, Phys. Rev. X 6, 011036 (2016).
    • (2016) Phys. Rev. X , vol.6
    • Vallés-Catalè, T.1    Massucci, F.A.2    Guimerà, R.3    Sales-Pardo, M.4
  • 13
    • 84892847223 scopus 로고    scopus 로고
    • Active Semi-Supervised Community Detection Algorithm with Label Propagation
    • M. Leng, Y. Yao, J. Cheng,W. Lv, and X. Chen, Active Semi-Supervised Community Detection Algorithm with Label Propagation, Lect. Notes Comput. Sci. 7826, 324 (2013).
    • (2013) Lect. Notes Comput. Sci , vol.7826 , pp. 324
    • Leng, M.1    Yao, Y.2    Cheng, J.3    Lv, W.4    Chen, X.5
  • 14
    • 84954231739 scopus 로고    scopus 로고
    • Active Discovery of Network Roles for Predicting the Classes of Network Nodes
    • L. Peel, Active Discovery of Network Roles for Predicting the Classes of Network Nodes, J. Complex Netw. 3, 431 (2015).
    • (2015) J. Complex Netw , vol.3 , pp. 431
    • Peel, L.1
  • 17
    • 84913529790 scopus 로고    scopus 로고
    • Phase Transitions in Semisupervised Clustering of Sparse Networks
    • P. Zhang, C. Moore, and L. Zdeborovà, Phase Transitions in Semisupervised Clustering of Sparse Networks, Phys. Rev. E 90, 052802 (2014).
    • (2014) Phys. Rev. E , vol.90
    • Zhang, P.1    Moore, C.2    Zdeborovà, L.3
  • 18
    • 84874831138 scopus 로고    scopus 로고
    • Community Structure Detection in Complex Networks with Partial Background Information
    • Z.-Y. Zhang, Community Structure Detection in Complex Networks with Partial Background Information, Europhys. Lett. 101, 48005 (2013).
    • (2013) Europhys. Lett , vol.101 , pp. 48005
    • Zhang, Z.-Y.1
  • 20
    • 84975047616 scopus 로고    scopus 로고
    • Structure and Inference in Annotated Networks
    • M. E. J. Newman and A. Clauset, Structure and Inference in Annotated Networks, Nat. Commun. 7, 11863 (2016).
    • (2016) Nat. Commun , vol.7 , pp. 11863
    • Newman, M.E.J.1    Clauset, A.2
  • 22
    • 43049151837 scopus 로고    scopus 로고
    • Hierarchical Structure and the Prediction of Missing Links in Networks
    • (London)
    • A. Clauset, C. Moore, and M. E. J. Newman, Hierarchical Structure and the Prediction of Missing Links in Networks, Nature (London) 453, 98 (2008).
    • (2008) Nature , vol.453 , pp. 98
    • Clauset, A.1    Moore, C.2    Newman, M.E.J.3
  • 23
    • 76049100050 scopus 로고    scopus 로고
    • Missing and Spurious Interactions and the Reconstruction of Complex Networks
    • R. Guimerà and M. Sales-Pardo, Missing and Spurious Interactions and the Reconstruction of Complex Networks, Proc. Natl. Acad. Sci. U.S.A. 106, 22073 (2009).
    • (2009) Proc. Natl. Acad. Sci. U.S.A , vol.106 , pp. 22073
    • Guimerà, R.1    Sales-Pardo, M.2
  • 24
    • 84892778654 scopus 로고    scopus 로고
    • A Network Inference Method for Large-Scale Unsupervised Identification of Novel Drug-Drug Interactions
    • R. Guimerà and M. Sales-Pardo, A Network Inference Method for Large-Scale Unsupervised Identification of Novel Drug-Drug Interactions, PLoS Comput. Biol. 9, e1003374 (2013).
    • (2013) PLoS Comput. Biol , vol.9
    • Guimerà, R.1    Sales-Pardo, M.2
  • 25
    • 84879674329 scopus 로고    scopus 로고
    • Predicting Future Conflict between Team-Members with Parameter-Free Models of Social Networks
    • N. Rovira-Asenjo, T. Gumí, M. Sales-Pardo, and R. Guimerà, Predicting Future Conflict between Team-Members with Parameter-Free Models of Social Networks, Sci. Rep. 3, 1999 (2013).
    • (2013) Sci. Rep , vol.3 , pp. 1999
    • Rovira-Asenjo, N.1    Gumí, T.2    Sales-Pardo, M.3    Guimerà, R.4
  • 26
    • 84875579940 scopus 로고    scopus 로고
    • Bootstrapping Topological Properties and Systemic Risk of Complex Networks Using the Fitness Model
    • N. Musmeci, S. Battiston, G. Caldarelli, M. Puliga, and A. Gabrielli, Bootstrapping Topological Properties and Systemic Risk of Complex Networks Using the Fitness Model, J. Stat. Phys. 151, 720 (2013).
    • (2013) J. Stat. Phys , vol.151 , pp. 720
    • Musmeci, N.1    Battiston, S.2    Caldarelli, G.3    Puliga, M.4    Gabrielli, A.5
  • 27
    • 84945217495 scopus 로고    scopus 로고
    • Estimating Topological Properties of Weighted Networks from Limited Information
    • G. Cimini, T. Squartini, A. Gabrielli, and D. Garlaschelli, Estimating Topological Properties of Weighted Networks from Limited Information, Phys. Rev. E 92, 040802 (2015).
    • (2015) Phys. Rev. E , vol.92
    • Cimini, G.1    Squartini, T.2    Gabrielli, A.3    Garlaschelli, D.4
  • 33
    • 84900331710 scopus 로고    scopus 로고
    • Hierarchical Block Structures and High-Resolution Model Selection in Large Networks
    • T. P. Peixoto, Hierarchical Block Structures and High-Resolution Model Selection in Large Networks, Phys. Rev. X 4, 011047 (2014).
    • (2014) Phys. Rev. X , vol.4
    • Peixoto, T.P.1
  • 34
    • 79951710564 scopus 로고    scopus 로고
    • Stochastic Blockmodels and Community Structure in Networks
    • B. Karrer and M. E. J. Newman, Stochastic Blockmodels and Community Structure in Networks, Phys. Rev. E 83, 016107 (2011).
    • (2011) Phys. Rev. E , vol.83
    • Karrer, B.1    Newman, M.E.J.2
  • 35
    • 84862006668 scopus 로고    scopus 로고
    • Entropy of Stochastic Blockmodel Ensembles
    • T. P. Peixoto, Entropy of Stochastic Blockmodel Ensembles, Phys. Rev. E 85, 056122 (2012).
    • (2012) Phys. Rev. E , vol.85
    • Peixoto, T.P.1
  • 36
    • 84961288934 scopus 로고    scopus 로고
    • Model Selection and Hypothesis Testing for Large-Scale Network Models with Overlapping Groups
    • T. P. Peixoto, Model Selection and Hypothesis Testing for Large-Scale Network Models with Overlapping Groups, Phys. Rev. X 5, 011033 (2015).
    • (2015) Phys. Rev. X , vol.5
    • Peixoto, T.P.1
  • 38
    • 34250655368 scopus 로고    scopus 로고
    • An Information-Theoretic Framework for Resolving Community Structure in Complex Networks
    • M. Rosvall and C. T. Bergstrom, An Information-Theoretic Framework for Resolving Community Structure in Complex Networks, Proc. Natl. Acad. Sci. U.S.A. 104, 7327 (2007).
    • (2007) Proc. Natl. Acad. Sci. U.S.A , vol.104 , pp. 7327
    • Rosvall, M.1    Bergstrom, C.T.2
  • 39
    • 0003998828 scopus 로고    scopus 로고
    • edited by G. Larry Bretthorst, Cambridge University Press, Cambridge, England
    • E. T. Jaynes, in Probability Theory: The Logic of Science, edited by G. Larry Bretthorst (Cambridge University Press, Cambridge, England, 2003).
    • (2003) Probability Theory: The Logic of Science
    • Jaynes, E.T.1
  • 40
    • 84875974381 scopus 로고    scopus 로고
    • Parsimonious Module Inference in Large Networks
    • T. P. Peixoto, Parsimonious Module Inference in Large Networks, Phys. Rev. Lett. 110, 148701 (2013).
    • (2013) Phys. Rev. Lett , vol.110
    • Peixoto, T.P.1
  • 41
    • 84555195640 scopus 로고    scopus 로고
    • Asymptotic Analysis of the Stochastic Block Model for Modular Networks and Its Algorithmic Applications
    • A. Decelle, F. Krzakala, C. Moore, and L. Zdeborová, Asymptotic Analysis of the Stochastic Block Model for Modular Networks and Its Algorithmic Applications, Phys. Rev. E 84, 066106 (2011).
    • (2011) Phys. Rev. E , vol.84
    • Decelle, A.1    Krzakala, F.2    Moore, C.3    Zdeborová, L.4
  • 42
    • 84894537759 scopus 로고    scopus 로고
    • Efficient Monte Carlo and Greedy Heuristic for the Inference of Stochastic Block Models
    • T. P. Peixoto, Efficient Monte Carlo and Greedy Heuristic for the Inference of Stochastic Block Models, Phys. Rev. E 89, 012804 (2014).
    • (2014) Phys. Rev. E , vol.89
    • Peixoto, T.P.1
  • 44
    • 0037062448 scopus 로고    scopus 로고
    • Community Structure in Social and Biological Networks
    • M. Girvan and M. E. J. Newman, Community Structure in Social and Biological Networks, Proc. Natl. Acad. Sci. U.S.A. 99, 7821 (2002).
    • (2002) Proc. Natl. Acad. Sci. U.S.A , vol.99 , pp. 7821
    • Girvan, M.1    Newman, M.E.J.2
  • 45
    • 84881648653 scopus 로고    scopus 로고
    • Clique Graphs and Overlapping Communities
    • T. S. Evans, Clique Graphs and Overlapping Communities, J. Stat. Mech. (2010) P12037.
    • (2010) J. Stat. Mech
    • Evans, T.S.1
  • 47
    • 36348947993 scopus 로고    scopus 로고
    • Modularity from Fluctuations in Random Graphs and Complex Networks
    • R. Guimerà, M. Sales-Pardo, and L. A. N. Amaral, Modularity from Fluctuations in Random Graphs and Complex Networks, Phys. Rev. E 70, 025101 (2004).
    • (2004) Phys. Rev. E , vol.70
    • Guimerà, R.1    Sales-Pardo, M.2    Amaral, L.A.N.3
  • 48
    • 77951138987 scopus 로고    scopus 로고
    • Performance of Modularity Maximization in Practical Contexts
    • B. H. Good, Y.-A. de Montjoye, and A. Clauset, Performance of Modularity Maximization in Practical Contexts, Phys. Rev. E 81, 046106 (2010).
    • (2010) Phys. Rev. E , vol.81
    • Good, B.H.1    de Montjoye, Y.-A.2    Clauset, A.3
  • 49
    • 55849088356 scopus 로고    scopus 로고
    • Benchmark Graphs for Testing Community Detection Algorithms
    • A. Lancichinetti, S. Fortunato, and F. Radicchi, Benchmark Graphs for Testing Community Detection Algorithms, Phys. Rev. E 78, 046110 (2008).
    • (2008) Phys. Rev. E , vol.78
    • Lancichinetti, A.1    Fortunato, S.2    Radicchi, F.3
  • 50
    • 84992636277 scopus 로고    scopus 로고
    • https://sites.google.com/site/santofortunato/inthepress2.
  • 51
    • 84992599308 scopus 로고    scopus 로고
    • Retrieved from http://geneontology.org/.
  • 53
    • 53349117774 scopus 로고    scopus 로고
    • High-Quality Binary Protein Interaction Map of the Yeast Interactome Network
    • H. Yu et al., High-Quality Binary Protein Interaction Map of the Yeast Interactome Network, Science 322, 104 (2008).
    • (2008) Science , vol.322 , pp. 104
    • Yu, H.1
  • 54
    • 78651317907 scopus 로고    scopus 로고
    • IsoBase: A Database of Functionally Related Proteins across PPI Networks
    • D. Park, R. Singh, M. Baym, C.-S. Liao, and B. Berger, IsoBase: A Database of Functionally Related Proteins across PPI Networks, Nucleic Acids Res. 39, D295 (2011).
    • (2011) Nucleic Acids Res , vol.39 , pp. D295
    • Park, D.1    Singh, R.2    Baym, M.3    Liao, C.-S.4    Berger, B.5
  • 55
    • 84875216538 scopus 로고    scopus 로고
    • PrePPI: A Structure-Informed Database of Protein-Protein Interactions
    • Q. C. Zhang, D. Petrey, J. I. Garzón, L. Deng, and B. Honig, PrePPI: A Structure-Informed Database of Protein-Protein Interactions, Nucleic Acids Res. 41, D828 (2013).
    • (2013) Nucleic Acids Res , vol.41 , pp. D828
    • Zhang, Q.C.1    Petrey, D.2    Garzón, J.I.3    Deng, L.4    Honig, B.5
  • 57
    • 84992550777 scopus 로고    scopus 로고
    • See www.caida.org/.
  • 59
    • 84992671161 scopus 로고    scopus 로고
    • Retrieved from http://snap.stanford.edu/data/com-DBLP.html.
  • 62
    • 79953680487 scopus 로고    scopus 로고
    • Trust Transitivity in Social Networks
    • O. Richters and T. P. Peixoto, Trust Transitivity in Social Networks, PLoS One 6, e18384 (2011).
    • (2011) PLoS One , vol.6
    • Richters, O.1    Peixoto, T.P.2
  • 65
    • 84992671142 scopus 로고    scopus 로고
    • http://www.debian.org.
  • 66
    • 84992576581 scopus 로고    scopus 로고
    • https://wiki.debian.org/Debtags.
  • 69
    • 84992542333 scopus 로고    scopus 로고
    • http://snap.stanford.edu/data/amazon-meta.html.
  • 70
    • 84992657331 scopus 로고    scopus 로고
    • http://www.imdb.com.
  • 71
    • 84992542328 scopus 로고    scopus 로고
    • Retrieved from http://publish.aps.org/dataset.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.