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Volumn 93, Issue 6, 2015, Pages 2745-2758

Divergent selection for residual feed intake affects the transcriptomic and proteomic profiles of pig skeletal muscle

Author keywords

Feed efficiency; Muscle; Pig; Proteome; Transcriptome

Indexed keywords

MITOCHONDRIAL PROTEIN;

EID: 84991227631     PISSN: 00218812     EISSN: 15253163     Source Type: Journal    
DOI: 10.2527/jas.2015-8928     Document Type: Article
Times cited : (65)

References (33)
  • 1
    • 77952856248 scopus 로고    scopus 로고
    • Energy utilization in pigs selected for high and low residual feed intake
    • Barea, R., S. Dubois, H. Gilbert, P. Sellier, J. van Milgen, and J. Noblet. 2010. Energy utilization in pigs selected for high and low residual feed intake. J. Anim. Sci. 88:2062–2072. doi:10.2527/jas.2009-2395
    • (2010) J. Anim. Sci , vol.88 , pp. 2062-2072
    • Barea, R.1    Dubois, S.2    Gilbert, H.3    Sellier, P.4    van Milgen, J.5    Noblet, J.6
  • 2
    • 84883498556 scopus 로고    scopus 로고
    • Mitochondrial redox metabolism in aging: Effect of exercise interventions
    • Bo, H., N. Jiang, L. L. Ji, and Y. Zhang. 2013. Mitochondrial redox metabolism in aging: Effect of exercise interventions. J. Sport Health Sci. 2:67–74. doi:10.1016/j.jshs.2013.03.006
    • (2013) J. Sport Health Sci , vol.2 , pp. 67-74
    • Bo, H.1    Jiang, N.2    Ji, L.L.3    Zhang, Y.4
  • 3
    • 65549154306 scopus 로고    scopus 로고
    • Association of mitochondrial function and feed efficiency in poultry and livestock species
    • Bottje, W. G., and G. E. Carstens. 2009. Association of mitochondrial function and feed efficiency in poultry and livestock species. J. Anim. Sci. 87(E. Suppl.):E48–E63.
    • (2009) J. Anim. Sci , vol.87 , pp. E48-E63
    • Bottje, W.G.1    Carstens, G.E.2
  • 4
    • 72549113914 scopus 로고    scopus 로고
    • SigReannot: An oligo-set re-annotation pipeline based on similarities with the Ensembl transcripts and Unigene clusters
    • Casel, P., F. Moreews, S. Lagarrigue, and C. Klopp. 2009. SigReannot: An oligo-set re-annotation pipeline based on similarities with the Ensembl transcripts and Unigene clusters. BMC Proc. 3(Suppl. 4):S3.
    • (2009) BMC Proc , vol.3 , pp. S3
    • Casel, P.1    Moreews, F.2    Lagarrigue, S.3    Klopp, C.4
  • 5
    • 84857517743 scopus 로고    scopus 로고
    • Metabolic and proteomic profiling of diapause in the aphid parasitoid praon volucre
    • Colinet, H., D. Renault, B. Charoy-Guevel, and E. Com. 2012. Metabolic and proteomic profiling of diapause in the aphid parasitoid praon volucre. PLoS ONE 7:e32606. doi:10.1371/journal.pone.0032606
    • (2012) Plos ONE , vol.7
    • Colinet, H.1    Renault, D.2    Charoy-Guevel, B.3    Com, E.4
  • 7
    • 0000538256 scopus 로고
    • Relations among individual (Residual) feed intake, growth-performance and feed-intake pattern of growing pigs in-group housing
    • De Haer, L. C. M., P. Luiting, and H. L. M. Aarts. 1993. Relations among individual (residual) feed intake, growth-performance and feed-intake pattern of growing pigs in-group housing. Livest. Prod. Sci. 36:233–253. doi:10.1016/0301-6226(93)90056-N
    • (1993) Livest. Prod. Sci , vol.36 , pp. 233-253
    • De Haer, L.C.M.1    Luiting, P.2    Aarts, H.L.M.3
  • 9
    • 0021687082 scopus 로고
    • Actin and tropomyosin variants in smooth muscles –Dependence on tissue type
    • Fatigati, V., and R. A. Murphy. 1984. Actin and tropomyosin variants in smooth muscles –Dependence on tissue type. J. Biol. Chem. 259:4383–4388.
    • (1984) J. Biol. Chem , vol.259 , pp. 4383-4388
    • Fatigati, V.1    Murphy, R.A.2
  • 10
    • 84866995845 scopus 로고    scopus 로고
    • Consequences of divergent selection for residual feed intake in pigs on muscle energy metabolism and meat quality
    • Faure, J., L. Lefaucheur, N. Bonhomme, P. Ecolan, K. Meteau, S. M. Coustard, M. Kouba, H. Gilbert, and B. Lebret. 2013. Consequences of divergent selection for residual feed intake in pigs on muscle energy metabolism and meat quality. Meat Sci. 93:37–45. doi:10.1016/j.meatsci.2012.07.006
    • (2013) Meat Sci , vol.93 , pp. 37-45
    • Faure, J.1    Lefaucheur, L.2    Bonhomme, N.3    Ecolan, P.4    Meteau, K.5    Coustard, S.M.6    Kouba, M.7    Gilbert, H.8    Lebret, B.9
  • 11
    • 37049029612 scopus 로고    scopus 로고
    • Genetic parameters for residual feed intake in growing pigs, with emphasis on genetic relationships with carcass and meat quality traits
    • Gilbert, H., J. P. Bidanel, J. Gruand, J. C. Caritez, Y. Billon, P. Guillouet, H. Lagant, J. Noblet, and P. Sellier. 2007. Genetic parameters for residual feed intake in growing pigs, with emphasis on genetic relationships with carcass and meat quality traits. J. Anim. Sci. 85:3182–3188. doi:10.2527/jas.2006-590
    • (2007) J. Anim. Sci , vol.85 , pp. 3182-3188
    • Gilbert, H.1    Bidanel, J.P.2    Gruand, J.3    Caritez, J.C.4    Billon, Y.5    Guillouet, P.6    Lagant, H.7    Noblet, J.8    Sellier, P.9
  • 12
    • 84882685825 scopus 로고    scopus 로고
    • Divergent genetic selection for residual feed intake impacts mitochondria reactive oxygen species production in pigs
    • Grubbs, J. K., A. N. Fritchen, E. Huff-Lonergan, J. C. M. Dekkers, N. K. Gabler, and S. M. Lonergan. 2013a. Divergent genetic selection for residual feed intake impacts mitochondria reactive oxygen species production in pigs. J. Anim. Sci. 91:2133–2140. doi:10.2527/jas.2012-5894
    • (2013) J. Anim. Sci , vol.91 , pp. 2133-2140
    • Grubbs, J.K.1    Fritchen, A.N.2    Huff-Lonergan, E.3    Dekkers, J.C.M.4    Gabler, N.K.5    Lonergan, S.M.6
  • 13
    • 84874797532 scopus 로고    scopus 로고
    • Selection for residual feed intake alters the mitochondria protein profile in pigs
    • Grubbs, J. K., A. N. Fritchen, E. Huff-Lonergan, N. K. Gabler, and S. M. Lonergan. 2013b. Selection for residual feed intake alters the mitochondria protein profile in pigs. J. Proteomics 80:334–345. doi:10.1016/j.jprot.2013.01.017
    • (2013) J. Proteomics , vol.80 , pp. 334-345
    • Grubbs, J.K.1    Fritchen, A.N.2    Huff-Lonergan, E.3    Gabler, N.K.4    Lonergan, S.M.5
  • 14
    • 0028788730 scopus 로고
    • VEGF gene expression is upregulated in electrically stimulated rat skeletal muscle
    • Hang, J., L. Kong, J. W. Gu, and T. H. Adair. 1995. VEGF gene expression is upregulated in electrically stimulated rat skeletal muscle. Am. J. Physiol. 269:H1827–H1831.
    • (1995) Am. J. Physiol , vol.269 , pp. H1827-H1831
    • Hang, J.1    Kong, L.2    Gu, J.W.3    Adair, T.H.4
  • 16
    • 5744228466 scopus 로고    scopus 로고
    • Assessment of postmortem proteolysis by gel-based proteome analysis and its relationship to meat quality traits in pig longissimus
    • Hwang, I. H., B. Y. Park, J. H. Kim, S. H. Cho, and J. M. Lee. 2005. Assessment of postmortem proteolysis by gel-based proteome analysis and its relationship to meat quality traits in pig longissimus. Meat Sci. 69:79–91. doi:10.1016/j.meatsci.2004.06.019
    • (2005) Meat Sci , vol.69 , pp. 79-91
    • Hwang, I.H.1    Park, B.Y.2    Kim, J.H.3    Cho, S.H.4    Lee, J.M.5
  • 17
    • 84873439774 scopus 로고    scopus 로고
    • Metabolic changes and tissue responses to selection on residual feed intake in growing pigs
    • Le Naou, T., N. Le Floc’h, I. Louveau, H. Gilbert, and F. Gondret. 2012. Metabolic changes and tissue responses to selection on residual feed intake in growing pigs. J. Anim. Sci. 90:4771–4780. doi:10.2527/jas.2012-5226
    • (2012) J. Anim. Sci , vol.90 , pp. 4771-4780
    • Le Naou, T.1    Le Floc’H, N.2    Louveau, I.3    Gilbert, H.4    Gondret, F.5
  • 18
    • 79960991407 scopus 로고    scopus 로고
    • Muscle characteristics and meat quality traits are affected by divergent selection on residual feed intake in pigs
    • Lefaucheur, L., B. Lebret, P. Ecolan, I. Louveau, M. Damon, A. Prunier, Y. Billon, P. Sellier, and H. Gilbert. 2011. Muscle characteristics and meat quality traits are affected by divergent selection on residual feed intake in pigs. J. Anim. Sci. 89:996–1010. doi:10.2527/jas.2010-3493
    • (2011) J. Anim. Sci , vol.89 , pp. 996-1010
    • Lefaucheur, L.1    Lebret, B.2    Ecolan, P.3    Louveau, I.4    Damon, M.5    Prunier, A.6    Billon, Y.7    Sellier, P.8    Gilbert, H.9
  • 20
    • 0034760422 scopus 로고    scopus 로고
    • Meat quality and the calpain system of feedlot steers following a single generation of divergent selection for residual feed intake
    • McDonagh, M. B., R. M. Herd, E. C. Richardson, V. H. Oddy, J. A. Archer, and P. F. Arthur. 2001. Meat quality and the calpain system of feedlot steers following a single generation of divergent selection for residual feed intake. Aust. J. Exp. Agric. 41:1013–1021. doi:10.1071/EA00024
    • (2001) Aust. J. Exp. Agric , vol.41 , pp. 1013-1021
    • McDonagh, M.B.1    Herd, R.M.2    Richardson, E.C.3    Oddy, V.H.4    Archer, J.A.5    Arthur, P.F.6
  • 21
    • 84914678499 scopus 로고    scopus 로고
    • Divergent selection for residual feed intake in group-housed growing pigs: Characteristics of physical and behavioural activity according to line and sex
    • Meunier-Salaün, M. C., C. Guérin, Y. Billon, P. Sellier, J. Noblet, and H. Gilbert. 2014. Divergent selection for residual feed intake in group-housed growing pigs: Characteristics of physical and behavioural activity according to line and sex. Animal 8:1898–1906. doi:10.1017/S1751731114001839
    • (2014) Animal , vol.8 , pp. 1898-1906
    • Meunier-Salaün, M.C.1    Guérin, C.2    Billon, Y.3    Sellier, P.4    Noblet, J.5    Gilbert, H.6
  • 22
    • 0032907687 scopus 로고    scopus 로고
    • Vascular endothelial growth factor (VEGF) and its receptors
    • Neufeld, G., T. Cohen, S. Gengrinovitch, and Z. Poltorak. 1999. Vascular endothelial growth factor (VEGF) and its receptors. FASEB J. 13:9–22.
    • (1999) FASEB J , vol.13 , pp. 9-22
    • Neufeld, G.1    Cohen, T.2    Gengrinovitch, S.3    Poltorak, Z.4
  • 23
    • 0031023872 scopus 로고    scopus 로고
    • Mammalian skeletal muscle fiber type transitions
    • Pette, D., and R. S. Staron. 1997. Mammalian skeletal muscle fiber type transitions. Int. Rev. Cytol. 170:143–223. doi:10.1016/S0074-7696(08)61622-8
    • (1997) Int. Rev. Cytol , vol.170 , pp. 143-223
    • Pette, D.1    Staron, R.S.2
  • 24
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • Pfaffl, M. W. 2001. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 29:e45. doi:10.1093/nar/29.9.e45
    • (2001) Nucleic Acids Res , vol.29
    • Pfaffl, M.W.1
  • 25
    • 0032806261 scopus 로고    scopus 로고
    • Oxidative myocytes of heart and skeletal muscle express abundant sarcomeric mitochondrial creatine kinase
    • Qin, W. N., Z. Khuchua, J. Boero, R. M. Payne, and A. W. Strauss. 1999. Oxidative myocytes of heart and skeletal muscle express abundant sarcomeric mitochondrial creatine kinase. Histochem. J. 31:357–365. doi:10.1023/A:1003748108062
    • (1999) Histochem. J , vol.31 , pp. 357-365
    • Qin, W.N.1    Khuchua, Z.2    Boero, J.3    Payne, R.M.4    Strauss, A.W.5
  • 26
    • 84971211544 scopus 로고    scopus 로고
    • R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria, Accessed 8 December 2011
    • R Development Core Team. 2008. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. http://www.R-project.org. (Accessed 8 December 2011.)
    • (2008)
  • 27
    • 20044379872 scopus 로고    scopus 로고
    • Exercise and hormesis: Oxidative stress-related adaptation for successful aging
    • Radak, Z., H. Y. Chung, and S. Goto. 2005. Exercise and hormesis: Oxidative stress-related adaptation for successful aging. Biogerontology 6:71–75. doi:10.1007/s10522-004-7386-7
    • (2005) Biogerontology , vol.6 , pp. 71-75
    • Radak, Z.1    Chung, H.Y.2    Goto, S.3
  • 28
    • 3042703233 scopus 로고    scopus 로고
    • Biological basis for variation in residual feed intake in beef cattle. 2. Synthesis of results following divergent selection
    • Richardson, E. C., and R. M. Herd. 2004. Biological basis for variation in residual feed intake in beef cattle. 2. Synthesis of results following divergent selection. Aust. J. Exp. Agric. 44:431–440. doi:10.1071/EA02221
    • (2004) Aust. J. Exp. Agric , vol.44 , pp. 431-440
    • Richardson, E.C.1    Herd, R.M.2
  • 30
  • 31
    • 79960610118 scopus 로고    scopus 로고
    • REVIGO Summarizes and visualizes long lists of gene ontology terms
    • Supek, F., M. Bosnjak, N. Skunca, and T. Smuc. 2011. REVIGO Summarizes and visualizes long lists of gene ontology terms. PLoS ONE 6:e21800. doi:10.1371/journal.pone.0021800
    • (2011) Plos ONE , vol.6
    • Supek, F.1    Bosnjak, M.2    Skunca, N.3    Smuc, T.4
  • 32
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • RESEARCH0034
    • Vandesompele, J, K. De Preter, F. Pattyn, B. Poppe, N. Van Roy, A. De Paepe, and F. Speleman. 2002. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 3:RESEARCH0034.
    • (2002) Genome Biol , vol.3
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5    De Paepe, A.6    Speleman, F.7
  • 33
    • 84873259931 scopus 로고    scopus 로고
    • Mitochondrial function, fatty acid metabolism, and immune system are relevant features of pig adipose tissue development
    • Vincent, A., I. Louveau, F. Gondret, B. Lebret, and M. Damon. 2012. Mitochondrial function, fatty acid metabolism, and immune system are relevant features of pig adipose tissue development. Physiol. Genomics 44:1116–1124. doi:10.1152/physiolgenomics.00098.2012
    • (2012) Physiol. Genomics , vol.44 , pp. 1116-1124
    • Vincent, A.1    Louveau, I.2    Gondret, F.3    Lebret, B.4    Damon, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.