-
1
-
-
84940771118
-
Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations
-
1 Liu, J.Z., van Sommeren, S., Huang, H., et al. Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations. Nat Genet 47 (2015), 979–986.
-
(2015)
Nat Genet
, vol.47
, pp. 979-986
-
-
Liu, J.Z.1
van Sommeren, S.2
Huang, H.3
-
2
-
-
84868336049
-
Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease
-
2 Jostins, L., Ripke, S., Weersma, R.K., et al. Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. Nature 491 (2012), 119–124.
-
(2012)
Nature
, vol.491
, pp. 119-124
-
-
Jostins, L.1
Ripke, S.2
Weersma, R.K.3
-
3
-
-
0035978651
-
Association of NOD2 leucine-rich repeat variants with susceptibility to Crohn's disease
-
3 Hugot, J.P., Chamaillard, M., Zouali, H., et al. Association of NOD2 leucine-rich repeat variants with susceptibility to Crohn's disease. Nature 411 (2001), 599–633.
-
(2001)
Nature
, vol.411
, pp. 599-633
-
-
Hugot, J.P.1
Chamaillard, M.2
Zouali, H.3
-
4
-
-
0035978533
-
A frameshift mutation in NOD2 associated with susceptibility to Crohn's disease
-
4 Ogura, Y., Bonen, D.K., Inohara, N., et al. A frameshift mutation in NOD2 associated with susceptibility to Crohn's disease. Nature 411 (2001), 603–606.
-
(2001)
Nature
, vol.411
, pp. 603-606
-
-
Ogura, Y.1
Bonen, D.K.2
Inohara, N.3
-
5
-
-
4444332518
-
Regulation of IL-8 and IL-1beta expression in Crohn's disease associated NOD2/CARD15 mutations
-
5 Li, J., Moran, T., Swanson, E., et al. Regulation of IL-8 and IL-1beta expression in Crohn's disease associated NOD2/CARD15 mutations. Hum Mol Genet 13 (2004), 1715–1725.
-
(2004)
Hum Mol Genet
, vol.13
, pp. 1715-1725
-
-
Li, J.1
Moran, T.2
Swanson, E.3
-
6
-
-
84899476119
-
Guidelines for investigating causality of sequence variants in human disease
-
6 MacArthur, D.G., Manolio, T.A., Dimmock, D.P., et al. Guidelines for investigating causality of sequence variants in human disease. Nature 508 (2014), 469–476.
-
(2014)
Nature
, vol.508
, pp. 469-476
-
-
MacArthur, D.G.1
Manolio, T.A.2
Dimmock, D.P.3
-
7
-
-
33646566332
-
A population-based case control study of potential risk factors for IBD
-
7 Bernstein, C.N., Rawsthorne, P., Cheang, M., et al. A population-based case control study of potential risk factors for IBD. Am J Gastroenterol 101 (2006), 993–1002.
-
(2006)
Am J Gastroenterol
, vol.101
, pp. 993-1002
-
-
Bernstein, C.N.1
Rawsthorne, P.2
Cheang, M.3
-
8
-
-
0022999823
-
Crohn's disease in Jewish people–an epidemiological study in south-east Wales
-
8 Mayberry, J.F., Judd, D., Smart, H., et al. Crohn's disease in Jewish people–an epidemiological study in south-east Wales. Digestion 35 (1986), 237–240.
-
(1986)
Digestion
, vol.35
, pp. 237-240
-
-
Mayberry, J.F.1
Judd, D.2
Smart, H.3
-
9
-
-
84874782510
-
The population genetics of the Jewish people
-
9 Ostrer, H., Skorecki, K., The population genetics of the Jewish people. Hum Genet 132 (2013), 119–127.
-
(2013)
Hum Genet
, vol.132
, pp. 119-127
-
-
Ostrer, H.1
Skorecki, K.2
-
10
-
-
0031595693
-
The APCI1307K allele and cancer risk in a community-based study of Ashkenazi Jews
-
10 Woodage, T., King, S.M., Wacholder, S., et al. The APCI1307K allele and cancer risk in a community-based study of Ashkenazi Jews. Nat Genet 20 (1998), 62–65.
-
(1998)
Nat Genet
, vol.20
, pp. 62-65
-
-
Woodage, T.1
King, S.M.2
Wacholder, S.3
-
11
-
-
0030592517
-
Lessons from hereditary colorectal cancer
-
11 Kinzler, K.W., Vogelstein, B., Lessons from hereditary colorectal cancer. Cell 87 (1996), 159–170.
-
(1996)
Cell
, vol.87
, pp. 159-170
-
-
Kinzler, K.W.1
Vogelstein, B.2
-
12
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
12 Li, H., Durbin, R., Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25 (2009), 1754–1760.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
13
-
-
33644874573
-
The UCSC Genome Browser Database: update 2006
-
13 Hinrichs, A.S., Karolchik, D., Baertsch, R., et al. The UCSC Genome Browser Database: update 2006. Nucleic Acids Res 34 (2006), D590–D598.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. D590-D598
-
-
Hinrichs, A.S.1
Karolchik, D.2
Baertsch, R.3
-
14
-
-
77956295988
-
The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data
-
14 McKenna, A., Hanna, M., Banks, E., et al. The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res 20 (2010), 1297–1303.
-
(2010)
Genome Res
, vol.20
, pp. 1297-1303
-
-
McKenna, A.1
Hanna, M.2
Banks, E.3
-
15
-
-
84880062762
-
Best practices and joint calling of the HumanExome BeadChip: the CHARGE Consortium
-
15 Grove, M.L., Yu, B., Cochran, B.J., et al. Best practices and joint calling of the HumanExome BeadChip: the CHARGE Consortium. PLoS One, 8, 2013, e68095.
-
(2013)
PLoS One
, vol.8
, pp. e68095
-
-
Grove, M.L.1
Yu, B.2
Cochran, B.J.3
-
16
-
-
34548292504
-
PLINK: a tool set for whole-genome association and population-based linkage analyses
-
16 Purcell, S., Neale, B., Todd-Brown, K., et al. PLINK: a tool set for whole-genome association and population-based linkage analyses. Am J Hum Genet 81 (2007), 559–575.
-
(2007)
Am J Hum Genet
, vol.81
, pp. 559-575
-
-
Purcell, S.1
Neale, B.2
Todd-Brown, K.3
-
17
-
-
84906912010
-
Cytobank: providing an analytics platform for community cytometry data analysis and collaboration
-
17 Chen, T.J., Kotecha, N., Cytobank: providing an analytics platform for community cytometry data analysis and collaboration. Curr Top Microbiol Immunol 377 (2014), 127–157.
-
(2014)
Curr Top Microbiol Immunol
, vol.377
, pp. 127-157
-
-
Chen, T.J.1
Kotecha, N.2
-
18
-
-
80054768631
-
Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE
-
18 Qiu, P., Simonds, E.F., Bendall, S.C., et al. Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE. Nat Biotechnol 29 (2011), 886–891.
-
(2011)
Nat Biotechnol
, vol.29
, pp. 886-891
-
-
Qiu, P.1
Simonds, E.F.2
Bendall, S.C.3
-
19
-
-
84859253322
-
A genome-wide scan of Ashkenazi Jewish Crohn's disease suggests novel susceptibility loci
-
19 Kenny, E.E., Pe'er, I., Karban, A., et al. A genome-wide scan of Ashkenazi Jewish Crohn's disease suggests novel susceptibility loci. PLoS Genet, 8, 2012, e1002559.
-
(2012)
PLoS Genet
, vol.8
, pp. e1002559
-
-
Kenny, E.E.1
Pe'er, I.2
Karban, A.3
-
20
-
-
84876349699
-
Resident and pro-inflammatory macrophages in the colon represent alternative context-dependent fates of the same Ly6Chi monocyte precursors
-
20 Bain, C.C., Scott, C.L., Uronen-Hansson, H., et al. Resident and pro-inflammatory macrophages in the colon represent alternative context-dependent fates of the same Ly6Chi monocyte precursors. Mucosal Immunol 6 (2013), 498–510.
-
(2013)
Mucosal Immunol
, vol.6
, pp. 498-510
-
-
Bain, C.C.1
Scott, C.L.2
Uronen-Hansson, H.3
-
21
-
-
84897053496
-
Microbiota-dependent crosstalk between macrophages and ILC3 promotes intestinal homeostasis
-
21 Mortha, A., Chudnovskiy, A., Hashimoto, D., et al. Microbiota-dependent crosstalk between macrophages and ILC3 promotes intestinal homeostasis. Science, 343, 2014, 1249288.
-
(2014)
Science
, vol.343
, pp. 1249288
-
-
Mortha, A.1
Chudnovskiy, A.2
Hashimoto, D.3
-
22
-
-
62949238310
-
Granulocyte-macrophage colony-stimulating factor autoantibodies in murine ileitis and progressive ileal Crohn's disease
-
e1-3
-
22 Han, X., Uchida, K., Jurickova, I., et al. Granulocyte-macrophage colony-stimulating factor autoantibodies in murine ileitis and progressive ileal Crohn's disease. Gastroenterology 136 (2009), 1261–1271 e1-3.
-
(2009)
Gastroenterology
, vol.136
, pp. 1261-1271
-
-
Han, X.1
Uchida, K.2
Jurickova, I.3
-
23
-
-
48449102092
-
The structure of the GM-CSF receptor complex reveals a distinct mode of cytokine receptor activation
-
23 Hansen, G., Hercus, T.R., McClure, B.J., et al. The structure of the GM-CSF receptor complex reveals a distinct mode of cytokine receptor activation. Cell 134 (2008), 496–507.
-
(2008)
Cell
, vol.134
, pp. 496-507
-
-
Hansen, G.1
Hercus, T.R.2
McClure, B.J.3
-
24
-
-
0031931409
-
Definition of the role of tyrosine residues of the common beta subunit regulating multiple signaling pathways of granulocyte-macrophage colony-stimulating factor receptor
-
24 Itoh, T., Liu, R., Yokota, T., et al. Definition of the role of tyrosine residues of the common beta subunit regulating multiple signaling pathways of granulocyte-macrophage colony-stimulating factor receptor. Mol Cell Biol 18 (1998), 742–752.
-
(1998)
Mol Cell Biol
, vol.18
, pp. 742-752
-
-
Itoh, T.1
Liu, R.2
Yokota, T.3
-
25
-
-
0033519629
-
Regulation and function of protein kinase B and MAP kinase activation by the IL-5/GM-CSF/IL-3 receptor
-
25 Dijkers, P.F., van Dijk, T.B., de Groot, R.P., et al. Regulation and function of protein kinase B and MAP kinase activation by the IL-5/GM-CSF/IL-3 receptor. Oncogene 18 (1999), 3334–3342.
-
(1999)
Oncogene
, vol.18
, pp. 3334-3342
-
-
Dijkers, P.F.1
van Dijk, T.B.2
de Groot, R.P.3
-
26
-
-
0031718359
-
Regulation of proliferation, differentiation and survival by the IL-3/IL-5/GM-CSF receptor family
-
26 de Groot, R.P., Coffer, P.J., Koenderman, L., Regulation of proliferation, differentiation and survival by the IL-3/IL-5/GM-CSF receptor family. Cell Signal 10 (1998), 619–628.
-
(1998)
Cell Signal
, vol.10
, pp. 619-628
-
-
de Groot, R.P.1
Coffer, P.J.2
Koenderman, L.3
-
27
-
-
84917712273
-
Sequencing an Ashkenazi reference panel supports population-targeted personal genomics and illuminates Jewish and European origins
-
27 Carmi, S., Hui, K.Y., Kochav, E., et al. Sequencing an Ashkenazi reference panel supports population-targeted personal genomics and illuminates Jewish and European origins. Nat Commun, 5, 2014, 4835.
-
(2014)
Nat Commun
, vol.5
, pp. 4835
-
-
Carmi, S.1
Hui, K.Y.2
Kochav, E.3
-
28
-
-
69449105914
-
Disordered macrophage cytokine secretion underlies impaired acute inflammation and bacterial clearance in Crohn's disease
-
28 Smith, A.M., Rahman, F.Z., Hayee, B., et al. Disordered macrophage cytokine secretion underlies impaired acute inflammation and bacterial clearance in Crohn's disease. J Exp Med 206 (2009), 1883–1897.
-
(2009)
J Exp Med
, vol.206
, pp. 1883-1897
-
-
Smith, A.M.1
Rahman, F.Z.2
Hayee, B.3
-
29
-
-
33846889015
-
GM-CSF autoantibodies and neutrophil dysfunction in pulmonary alveolar proteinosis
-
29 Uchida, K., Beck, D.C., Yamamoto, T., et al. GM-CSF autoantibodies and neutrophil dysfunction in pulmonary alveolar proteinosis. N Engl J Med 356 (2007), 567–579.
-
(2007)
N Engl J Med
, vol.356
, pp. 567-579
-
-
Uchida, K.1
Beck, D.C.2
Yamamoto, T.3
-
30
-
-
79960030561
-
Defective leukocyte GM-CSF receptor (CD116) expression and function in inflammatory bowel disease
-
30 Goldstein, J.I., Kominsky, D.J., Jacobson, N., et al. Defective leukocyte GM-CSF receptor (CD116) expression and function in inflammatory bowel disease. Gastroenterology 141 (2011), 208–216.
-
(2011)
Gastroenterology
, vol.141
, pp. 208-216
-
-
Goldstein, J.I.1
Kominsky, D.J.2
Jacobson, N.3
-
31
-
-
84934969613
-
MOR103, a human monoclonal antibody to granulocyte-macrophage colony-stimulating factor, in the treatment of patients with moderate rheumatoid arthritis: results of a phase Ib/IIa randomised, double-blind, placebo-controlled, dose-escalation trial
-
31 Behrens, F., Tak, P.P., Ostergaard, M., et al. MOR103, a human monoclonal antibody to granulocyte-macrophage colony-stimulating factor, in the treatment of patients with moderate rheumatoid arthritis: results of a phase Ib/IIa randomised, double-blind, placebo-controlled, dose-escalation trial. Ann Rheum Dis 74 (2015), 1058–1064.
-
(2015)
Ann Rheum Dis
, vol.74
, pp. 1058-1064
-
-
Behrens, F.1
Tak, P.P.2
Ostergaard, M.3
-
32
-
-
84862177873
-
Sargramostim (GM-CSF) for induction of remission in Crohn's disease: a cochrane inflammatory bowel disease and functional bowel disorders systematic review of randomized trials
-
32 Roth, L., MacDonald, J.K., McDonald, J.W., et al. Sargramostim (GM-CSF) for induction of remission in Crohn's disease: a cochrane inflammatory bowel disease and functional bowel disorders systematic review of randomized trials. Inflamm Bowel Dis 18 (2012), 1333–1339.
-
(2012)
Inflamm Bowel Dis
, vol.18
, pp. 1333-1339
-
-
Roth, L.1
MacDonald, J.K.2
McDonald, J.W.3
-
33
-
-
84873542232
-
GM-CSF produced by nonhematopoietic cells is required for early epithelial cell proliferation and repair of injured colonic mucosa
-
33 Egea, L., McAllister, C.S., Lakhdari, O., et al. GM-CSF produced by nonhematopoietic cells is required for early epithelial cell proliferation and repair of injured colonic mucosa. J Immunol 190 (2013), 1702–1713.
-
(2013)
J Immunol
, vol.190
, pp. 1702-1713
-
-
Egea, L.1
McAllister, C.S.2
Lakhdari, O.3
-
34
-
-
84896730900
-
A Crohn's disease variant in Atg16l1 enhances its degradation by caspase 3
-
34 Murthy, A., Li, Y., Peng, I., et al. A Crohn's disease variant in Atg16l1 enhances its degradation by caspase 3. Nature 506 (2014), 456–462.
-
(2014)
Nature
, vol.506
, pp. 456-462
-
-
Murthy, A.1
Li, Y.2
Peng, I.3
-
35
-
-
84901660514
-
Atg16L1 T300A variant decreases selective autophagy resulting in altered cytokine signaling and decreased antibacterial defense
-
35 Lassen, K.G., Kuballa, P., Conway, K.L., et al. Atg16L1 T300A variant decreases selective autophagy resulting in altered cytokine signaling and decreased antibacterial defense. Proc Natl Acad Sci U S A 111 (2014), 7741–7746.
-
(2014)
Proc Natl Acad Sci U S A
, vol.111
, pp. 7741-7746
-
-
Lassen, K.G.1
Kuballa, P.2
Conway, K.L.3
-
36
-
-
3442877820
-
Gastrointestinal involvement in chronic granulomatous disease
-
36 Marciano, B.E., Rosenzweig, S.D., Kleiner, D.E., et al. Gastrointestinal involvement in chronic granulomatous disease. Pediatrics 114 (2004), 462–468.
-
(2004)
Pediatrics
, vol.114
, pp. 462-468
-
-
Marciano, B.E.1
Rosenzweig, S.D.2
Kleiner, D.E.3
-
37
-
-
69549121823
-
Revisiting Crohn's disease as a primary immunodeficiency of macrophages
-
37 Casanova, J.L., Abel, L., Revisiting Crohn's disease as a primary immunodeficiency of macrophages. J Exp Med 206 (2009), 1839–1843.
-
(2009)
J Exp Med
, vol.206
, pp. 1839-1843
-
-
Casanova, J.L.1
Abel, L.2
|