Na+-Induced Conformational Change of Pb2+-Stabilized G-Quadruplex and Its Influence on Pb2+ Detection

Analytical Chemistry

Volumn 88, Issue 19, 2016, Pages 9375-9380

  Yu, Ze ^a   Zhou, Wei ^a   Han, Juan ^a   Li, Yunchao ^a   Fan, Louzhen ^a   Li, Xiaohong ^a  

^a BEIJING NORMAL UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

CIRCULAR DICHROISM SPECTROSCOPY; DESORPTION; DICHROISM; DNA; ELECTROPHORESIS; FLUORESCENCE; MASS SPECTROMETRY; POLYACRYLATES; PROBES; SIGNAL TO NOISE RATIO; THERMODYNAMICS;

CONFORMATIONAL CHANGE; CONFORMATIONAL TRANSITIONS; DOUBLE-STRANDED DNA (DS-DNA); FLUORESCENCE PROBES; LOWER DETECTION LIMIT; MATRIX-ASSISTED LASER DESORPTION/IONIZATION-TIME-OF-FLIGHT MASS SPECTROMETRY; POLYACRYLAMIDE GEL ELECTROPHORESIS; THERMAL DENATURATIONS;

SODIUM;

EID: 84989841280     PISSN: 00032700     EISSN: 15206882     Source Type: Journal    
DOI: 10.1021/acs.analchem.6b02466     Document Type: Article

References (57)

1. He, Q.; Miller, E. W.; Wong, A. P.; Chang, C. J. J. Am. Chem. Soc. 2006, 128, 9316-9317 10.1021/ja063029x
2. Xiang, Y.; Tong, A.; Lu, Y. J. Am. Chem. Soc. 2009, 131, 15352-15357 10.1021/ja905854a
3. Wang, H.; Kim, Y.; Liu, H.; Zhu, Z.; Bamrungsap, S.; Tan, W. J. Am. Chem. Soc. 2009, 131, 8221-8226 10.1021/ja901132y
4. Kuo, S. Y.; Li, H. H.; Wu, P. J.; Chen, C. P.; Huang, Y. C.; Chan, Y. H. Anal. Chem. 2015, 87, 4765-4771 10.1021/ac504845t
5. Yetisen, A. K.; Montelongo, Y.; Qasim, M. M.; Butt, H.; Wilkinson, T. D.; Monteiro, M. J.; Yun, S. H. Anal. Chem. 2015, 87, 5101-5108 10.1021/ac504274q
6. Huang, P. J.; Liu, J. Anal. Chem. 2014, 86, 5999-6005 10.1021/ac501070a
7. Panich, S.; Wilson, K. A.; Nuttall, P.; Wood, C. K.; Albrecht, T.; Edel, J. B. Anal. Chem. 2014, 86, 6299-6306 10.1021/ac500845h
8. Lin, Z.; Li, X.; Kraatz, H. B. Anal. Chem. 2011, 83, 6896-6901 10.1021/ac2014096
9. Li, T.; Wang, E.; Dong, S. Anal. Chem. 2010, 82, 1515-1520 10.1021/ac902638v
10. Li, C. L.; Liu, K. T.; Lin, Y. W.; Chang, H. T. Anal. Chem. 2011, 83, 225-230 10.1021/ac1028787
11. Li, C. L.; Huang, C. C.; Chen, W. H.; Chiang, C. K.; Chang, H. T. Analyst 2012, 137, 5222-5228 10.1039/c2an35599j
12. Xu, L.; Shen, X.; Hong, S.; Wang, J.; Zhang, Y.; Wang, H.; Zhang, J.; Pei, R. Chem. Commun. (Cambridge, U. K.) 2015, 51, 8165-8168 10.1039/C5CC01590A
13. Jacobi, Z. E.; Li, L.; Liu, J. Analyst 2012, 137, 704-709 10.1039/C2AN15754C
14. Li, T.; Dong, S.; Wang, E. J. Am. Chem. Soc. 2010, 132, 13156-13157 10.1021/ja105849m
15. Li, F.; Feng, Y.; Zhao, C.; Tang, B. Chem. Commun. (Cambridge, U. K.) 2011, 47, 11909-11911 10.1039/c1cc15023e
16. Li, F.; Yang, L.; Chen, M.; Li, P.; Tang, B. Analyst 2013, 138, 461-466 10.1039/C2AN36227A
17. Li, F.; Yang, L.; Chen, M.; Qian, Y.; Tang, B. Biosens. Bioelectron. 2013, 41, 903-906 10.1016/j.bios.2012.09.048
18. Zhan, S.; Wu, Y.; Luo, Y.; Liu, L.; He, L.; Xing, H.; Zhou, P. Anal. Biochem. 2014, 462, 19-25 10.1016/j.ab.2014.01.010
19. Wang, H.; Wang, D. M.; Huang, C. Z. Analyst 2015, 140, 5742-5747 10.1039/C5AN00884K
20. Zang, Y.; Lei, J.; Hao, Q.; Ju, H. ACS Appl. Mater. Interfaces 2014, 6, 15991-15997 10.1021/am503804g
21. Yang, C.; Liu, L.; Zeng, T.; Yang, D.; Yao, Z.; Zhao, Y.; Wu, H. C. Anal. Chem. 2013, 85, 7302-7307 10.1021/ac401198d
22. Zhu, X.; Gao, X.; Liu, Q.; Lin, Z.; Qiu, B.; Chen, G. Chem. Commun. (Cambridge, U. K.) 2011, 47, 7437-7439 10.1039/c1cc11349f
23. Liu, C. W.; Huang, C. C.; Chang, H. T. Anal. Chem. 2009, 81, 2383-2387 10.1021/ac8022185
24. Zhang, L.; Wong, J. X.; Li, X.; Li, Y.; Yu, H. Z. Anal. Chem. 2015, 87, 5062-5067 10.1021/acs.analchem.5b00899
25. Moy, A.; Merlet, C.; Dugne, O. Anal. Chem. 2015, 87, 7779-7786 10.1021/acs.analchem.5b01443
26. Lei, Y. M.; Huang, W. X.; Zhao, M.; Chai, Y. Q.; Yuan, R.; Zhuo, Y. Anal. Chem. 2015, 87, 7787-7794 10.1021/acs.analchem.5b01445
27. Cui, L.; Wu, J.; Li, J.; Ju, H. Anal. Chem. 2015, 87, 10635-10641 10.1021/acs.analchem.5b03287
28. Lien, C. W.; Tseng, Y. T.; Huang, C. C.; Chang, H. T. Anal. Chem. 2014, 86, 2065-2072 10.1021/ac4036789
29. Kang, D. H.; Jung, H. S.; Ahn, N.; Yang, S. M.; Seo, S.; Suh, K. Y.; Chang, P. S.; Jeon, N. L.; Kim, J.; Kim, K. ACS Appl. Mater. Interfaces 2014, 6, 10631-10637 10.1021/am502319m
30. Hwang, K.; Wu, P.; Kim, T.; Lei, L.; Tian, S.; Wang, Y.; Lu, Y. Angew. Chem., Int. Ed. 2014, 53, 13798-13802 10.1002/anie.201408333
31. Lu, H.; Li, S.; Chen, J.; Xia, J.; Zhang, J.; Huang, Y.; Liu, X.; Wu, H. C.; Zhao, Y.; Chai, Z.; Hu, Y. Metallomics 2015, 7, 1508-1514 10.1039/C5MT00188A
32. Kim, B. G.; Evans, H. M.; Dubins, D. N.; Chalikian, T. V. Biochemistry 2015, 54, 3420-3430 10.1021/acs.biochem.5b00097
33. Phan, A. T. FEBS J. 2010, 277, 1107-1117 10.1111/j.1742-4658.2009.07464.x
34. Noer, S. L.; Preus, S.; Gudnason, D.; Aznauryan, M.; Mergny, J.-L. L.; Birkedal, V. Nucleic Acids Res. 2016, 44, 464 10.1093/nar/gkv1320
35. Kuo, M.; Wang, Z.-F.; Tseng, T.-Y.; Li, M.-H.; Hsu, S.-T.; Lin, J.-J.; Chang, T.-C. J. Am. Chem. Soc. 2015, 137, 210-218 10.1021/ja5089327
36. Bončina, M.; Podlipnik, Č.; Piantanida, I.; Eilmes, J.; Teulade-Fichou, M.-P. P.; Vesnaver, G.; Lah, J. Nucleic Acids Res. 2015, 43, 10376-10386 10.1093/nar/gkv1167
37. Liu, W.; Zhu, H.; Zheng, B.; Cheng, S.; Fu, Y.; Li, W.; Lau, T.-C.; Liang, H. Nucleic Acids Res. 2012, 40, 4229-4236 10.1093/nar/gkr1310
38. Mukundan, V.; Do, N.; Phan, A. Nucleic Acids Res. 2011, 39, 8984-8991 10.1093/nar/gkr540
39. Zhou, J.; Yuan, G.; Liu, J.; Zhan, C.-G. G. Chem.-Eur. J. 2007, 13, 945-949 10.1002/chem.200600424
40. Sun, H.; Xiang, J.; Gai, W.; Liu, Y.; Guan, A.; Yang, Q.; Li, Q.; Shang, Q.; Su, H.; Tang, Y.; Xu, G. Chem. Commun. (Cambridge, U. K.) 2013, 49, 4510-4512 10.1039/c3cc39020a
41. Vega, M.; Pardo, R.; Barrado, E.; Debán, L. Water Res. 1998, 32, 3581-3592 10.1016/S0043-1354(98)00138-9
42. Ng, H. Y.; Ong, S. L.; Ng, W. J. J. Environ. Eng. 2005, 131, 1557 10.1061/(ASCE)0733-9372(2005)131:11(1557)
43. Lerman, A.; Weiler, R. R. Earth Planet. Sci. Lett. 1970, 10, 150-156 10.1016/0012-821X(70)90077-4
44. Hesp, R.; Ramsbottom, B. Nature 1965, 208, 1341-1342 10.1038/2081341a0
45. Culkin, F.; Cox, R. A. Deep-Sea Res. Oceanogr. Abstr. 1976, 13, 789-804 10.1016/0011-7471(76)90905-0
46. Kotch, F. W.; Fettinger, J. C.; Davis, J. T. Org. Lett. 2000, 2, 3277-3280 10.1021/ol0065120
47. Gu, J.; Leszczynski, J. J. Phys. Chem. A 2002, 106, 529-532 10.1021/jp012739g
48. Liu, W.; Zhu, H.; Zheng, B.; Cheng, S.; Fu, Y.; Li, W.; Lau, T. C.; Liang, H. Nucleic Acids Res. 2012, 40, 4229-4236 10.1093/nar/gkr1310
49. Liu, W.; Fu, Y.; Zheng, B.; Cheng, S.; Li, W.; Lau, T. C.; Liang, H. J. Phys. Chem. B 2011, 115, 13051-13056 10.1021/jp2074489
50. Olsen, C. M.; Gmeiner, W. H.; Marky, L. A. J. Phys. Chem. B 2006, 110, 6962-6969 10.1021/jp0574697
51. Wang, Y.; Hamasaki, K.; Rando, R. R. Biochemistry 1997, 36, 768-779 10.1021/bi962095g
52. Xu, Y.; Kaminaga, K.; Komiyama, M. J. Am. Chem. Soc. 2008, 130, 11179-11184 10.1021/ja8031532
53. Tóthová, P.; Krafčíková, P.; Víglaský, V. Biochemistry 2014, 53, 7013-7027 10.1021/bi500773c
54. Li, T.; Wang, E.; Dong, S. J. Am. Chem. Soc. 2009, 131, 15082-15083 10.1021/ja9051075
55. Mergny, J.-L.; Lacroix, L. In Current Protocols in Nucleic Acid Chemistry; John Wiley and Sons: New York, 2009, Chapter 17, Unit 17.1.11.
56. Hatzakis, E.; Okamoto, K.; Yang, D. Biochemistry 2010, 49, 9152-9160 10.1021/bi100946g
57. Li, T.; Wang, E.; Dong, S. Anal. Chem. 2010, 82, 7576-7580 10.1021/ac1019446