-
1
-
-
84877585171
-
Whole-brain functional imaging at cellular resolution using light-sheet microscopy
-
Ahrens, M. B., M. B. Orger, D. N. Robson, J. M. Li, and P. J. Keller. 2013. Whole-brain functional imaging at cellular resolution using light-sheet microscopy. Nat. Methods 10: 413-420.
-
(2013)
Nat. Methods
, vol.10
, pp. 413-420
-
-
Ahrens, M.B.1
Orger, M.B.2
Robson, D.N.3
Li, J.M.4
Keller, P.J.5
-
2
-
-
0019494948
-
Cell-substrate contacts illuminated by total internal reflection fluorescence
-
Axelrod, D. 1981. Cell-substrate contacts illuminated by total internal reflection fluorescence. J. Cell Biol. 89: 141-145.
-
(1981)
J. Cell Biol
, vol.89
, pp. 141-145
-
-
Axelrod, D.1
-
3
-
-
84866252908
-
Scanned light sheet microscopy with confocal slit detection
-
Baumgart, E., and U. Kubitscheck. 2012. Scanned light sheet microscopy with confocal slit detection. Opt. Express 20: 21805-21814.
-
(2012)
Opt. Express
, vol.20
, pp. 21805-21814
-
-
Baumgart, E.1
Kubitscheck, U.2
-
4
-
-
4544381360
-
Minimizing photobleaching during confocal microscopy of fluorescent probes bound to chromatin: Role of anoxia and photon flux
-
Bernas, T., M. Zarêbski, R. R. Cook, and J. W. Dobrucki. 2004. Minimizing photobleaching during confocal microscopy of fluorescent probes bound to chromatin: role of anoxia and photon flux. J. Microsc. 215: 281-296.
-
(2004)
J. Microsc
, vol.215
, pp. 281-296
-
-
Bernas, T.1
Zarêbski, M.2
Cook, R.R.3
Dobrucki, J.W.4
-
5
-
-
37549024176
-
An optical technique for remote focusing in microscopy
-
Botcherby, E. J., R. Juškaitis, M. J. Booth, and T. Wilson. 2008. An optical technique for remote focusing in microscopy. Opt. Commun. 281: 880-887.
-
(2008)
Opt. Commun
, vol.281
, pp. 880-887
-
-
Botcherby, E.J.1
Juškaitis, R.2
Booth, M.J.3
Wilson, T.4
-
6
-
-
84923071263
-
Swept confocally-aligned planar excitation (SCAPE) microscopy for highspeed volumetric imaging of behaving organisms
-
Bouchard, M. B., V. Voleti, C. S. Mendes, C. Lacefield, W. B. Grueber, R. S. Mann, R. M. Bruno, and E. M. C. Hillman. 2015. Swept confocally-aligned planar excitation (SCAPE) microscopy for highspeed volumetric imaging of behaving organisms. Nat. Photonics 9: 113-119.
-
(2015)
Nat. Photonics
, vol.9
, pp. 113-119
-
-
Bouchard, M.B.1
Voleti, V.2
Mendes, C.S.3
Lacefield, C.4
Grueber, W.B.5
Mann, R.S.6
Bruno, R.M.7
Hillman, E.M.C.8
-
7
-
-
34247552261
-
Design and quantitative resolution measurements of an optical virtual sectioning three-dimensional imaging technique for biomedical specimens, featuring twomicrometer slicing resolution
-
Buytaert, J. A. N., and J. J. J. Dirckx. 2007. Design and quantitative resolution measurements of an optical virtual sectioning three-dimensional imaging technique for biomedical specimens, featuring twomicrometer slicing resolution. J. Biomed. Opt. 12: 014039.
-
(2007)
J. Biomed. Opt
, vol.12
-
-
Buytaert, J.A.N.1
Dirckx, J.J.J.2
-
8
-
-
84908251017
-
Lattice light-sheet microscopy: Imaging molecules to embryos at high spatiotemporal resolution
-
Chen, B.-C., W. R. Legant, K. Wang, L. Shao, D. E. Milkie, M. W. Davidson, C. Janetopoulos, X. S. Wu, J. A. Hammer III, Z. Liu et al. 2014. Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution. Science 346: 1257998.
-
(2014)
Science
, vol.346
-
-
Chen, B.-C.1
Legant, W.R.2
Wang, K.3
Shao, L.4
Milkie, D.E.5
Davidson, M.W.6
Janetopoulos, C.7
Wu, X.S.8
Hammer, J.A.9
Liu, Z.10
-
9
-
-
84928128746
-
Fast imaging of live organisms with sculpted light sheets
-
Chmielewski, A. K., A. Kyrsting, P. Mahou, M. T. Wayland, L. Muresan, J. F. Evers, and C. F. Kaminski. 2015. Fast imaging of live organisms with sculpted light sheets. Sci. Rep. 5: 9385-9389.
-
(2015)
Sci. Rep
, vol.5
, pp. 9385-9389
-
-
Chmielewski, A.K.1
Kyrsting, A.2
Mahou, P.3
Wayland, M.T.4
Muresan, L.5
Evers, J.F.6
Kaminski, C.F.7
-
10
-
-
84900279721
-
Confocal microscopy of living cells
-
3rd ed., J. B. Pawley, ed. Springer, New York
-
Dailey, M. E., E. Manders, D. R. Soll, and M. Terasaki. 2006. Confocal microscopy of living cells. Pp. 381-403 in Handbook Of Biological Confocal Microscopy, 3rd ed., J. B. Pawley, ed. Springer, New York.
-
(2006)
Handbook of Biological Confocal Microscopy
, pp. 381-403
-
-
Dailey, M.E.1
Manders, E.2
Soll, D.R.3
Terasaki, M.4
-
11
-
-
84948685100
-
Confocal multiview light-sheet microscopy
-
De Medeiros, G., N. Norlin, S. Gunther, M. Albert, L. Panavaite, U.-M. Fiuza, F. Peri, T. Hiiragi, U. Krzic, and L. Hufnagel. 2015. Confocal multiview light-sheet microscopy. Nat. Commun. 6: 8881.
-
(2015)
Nat. Commun
, vol.6
, pp. 8881
-
-
De Medeiros, G.1
Norlin, N.2
Gunther, S.3
Albert, M.4
Panavaite, L.5
Fiuza, U.-M.6
Peri, F.7
Hiiragi, T.8
Krzic, U.9
Hufnagel, L.10
-
12
-
-
84905842354
-
Mitigating phototoxicity during multiphoton microscopy of live Drosophila embryos in the 1.0-1.2 μm wavelength range
-
Débarre, D., N. Olivier, W. Supatto, and E. Beaurepaire. 2014. Mitigating phototoxicity during multiphoton microscopy of live Drosophila embryos in the 1.0-1.2 μm wavelength range. PLoS One 9: e104250.
-
(2014)
Plos One
, vol.9
-
-
Débarre, D.1
Olivier, N.2
Supatto, W.3
Beaurepaire, E.4
-
13
-
-
0142134227
-
Cell damage and reactive oxygen species production induced by fluorescence microscopy: Effect on mitosis and guidelines for non-invasive fluorescence microscopy
-
Dixit, R., and R. Cyr. 2003. Cell damage and reactive oxygen species production induced by fluorescence microscopy: effect on mitosis and guidelines for non-invasive fluorescence microscopy. Plant J. 36: 280-290.
-
(2003)
Plant J
, vol.36
, pp. 280-290
-
-
Dixit, R.1
Cyr, R.2
-
14
-
-
57349144500
-
Optically sectioned imaging by oblique plane microscopy
-
Dunsby, C. 2008. Optically sectioned imaging by oblique plane microscopy. Opt. Express 16: 20306-20316.
-
(2008)
Opt. Express
, vol.16
, pp. 20306-20316
-
-
Dunsby, C.1
-
15
-
-
33745505322
-
Resolution enhancement in a light-sheet-based microscope (SPIM)
-
Engelbrecht, C. J., and E. H. Stelzer. 2006. Resolution enhancement in a light-sheet-based microscope (SPIM). Opt. Lett. 31: 1477-1479.
-
(2006)
Opt. Lett
, vol.31
, pp. 1477-1479
-
-
Engelbrecht, C.J.1
Stelzer, E.H.2
-
16
-
-
4444339833
-
Oxidative DNA damage and disease: Induction, repair and significance
-
Evans, M. D., M. Dizdaroglu, and M. S. Cooke. 2004. Oxidative DNA damage and disease: induction, repair and significance. Mutat. Res. 567: 1-61.
-
(2004)
Mutat. Res
, vol.567
, pp. 1-61
-
-
Evans, M.D.1
Dizdaroglu, M.2
Cooke, M.S.3
-
17
-
-
84856747244
-
Propagation stability of self-reconstructing Bessel beams enables contrast-enhanced imaging in thick media
-
Fahrbach, F. O., and A. Rohrbach. 2012. Propagation stability of self-reconstructing Bessel beams enables contrast-enhanced imaging in thick media. Nat. Commun. 3: 632.
-
(2012)
Nat. Commun
, vol.3
, pp. 632
-
-
Fahrbach, F.O.1
Rohrbach, A.2
-
19
-
-
84884578338
-
Rapid 3D light-sheet microscopy with a tunable lens
-
Fahrbach, F. O., F. F. Voigt, B. Schmid, F. Helmchen, and J. Huisken. 2013. Rapid 3D light-sheet microscopy with a tunable lens. Opt. Express 21: 21010-21026.
-
(2013)
Opt. Express
, vol.21
, pp. 21010-21026
-
-
Fahrbach, F.O.1
Voigt, F.F.2
Schmid, B.3
Helmchen, F.4
Huisken, J.5
-
20
-
-
66949149178
-
Live-cell microscopy: Tips and tools
-
Frigault, M. M., J. Lacoste, J. L. Swift, and C. M. Brown. 2009. Live-cell microscopy: tips and tools. J. Cell Sci. 122: 753-767.
-
(2009)
J. Cell Sci
, vol.122
, pp. 753-767
-
-
Frigault, M.M.1
Lacoste, J.2
Swift, J.L.3
Brown, C.M.4
-
21
-
-
84962231349
-
Imaging multicellular specimens with real-time optimized tiling light-sheet selective plane illumination microscopy
-
Fu, Q., B. L. Martin, D. Q. Matus, and L. Gao. 2016. Imaging multicellular specimens with real-time optimized tiling light-sheet selective plane illumination microscopy. Nat. Commun. 7: 11088.
-
(2016)
Nat. Commun
, vol.7
, pp. 11088
-
-
Fu, Q.1
Martin, B.L.2
Matus, D.Q.3
Gao, L.4
-
22
-
-
84931289172
-
Extend the field of view of selective plan illumination microscopy by tiling the excitation light sheet
-
Gao, L. 2015. Extend the field of view of selective plan illumination microscopy by tiling the excitation light sheet. Opt. Express 23: 6102-6111.
-
(2015)
Opt. Express
, vol.23
, pp. 6102-6111
-
-
Gao, L.1
-
23
-
-
84881437733
-
The transience of transient overexpression
-
Gibson, T. J., M. Seiler, and R. A. Veitia. 2013. The transience of transient overexpression. Nat. Methods 10: 715-721.
-
(2013)
Nat. Methods
, vol.10
, pp. 715-721
-
-
Gibson, T.J.1
Seiler, M.2
Veitia, R.A.3
-
25
-
-
84879693031
-
OpenSpinMicroscopy: An open-source integrated microscopy platform
-
Gualda, E. J., T. Vale, P. Almada, J. A. Feijo´, G. G. Martins, and N. Moreno. 2013. OpenSpinMicroscopy: an open-source integrated microscopy platform. Nat. Methods 10: 599-600.
-
(2013)
Nat. Methods
, vol.10
, pp. 599-600
-
-
Gualda, E.J.1
Vale, T.2
Almada, P.3
Feijo´, J.A.4
Martins, G.G.5
Moreno, N.6
-
26
-
-
84905653532
-
Imaging of human differentiated 3D neural aggregates using light sheet fluorescence microscopy
-
Gualda, E. J., D. Simão, C. Pinto, P. M. Alves, and C. Brito. 2014. Imaging of human differentiated 3D neural aggregates using light sheet fluorescence microscopy. Front Cell Neurosci. 8: 221.
-
(2014)
Front Cell Neurosci
, vol.8
, pp. 221
-
-
Gualda, E.J.1
Simão, D.2
Pinto, C.3
Alves, P.M.4
Brito, C.5
-
27
-
-
84961855141
-
SPIM-fluid: Open source light-sheet based platform for high-throughput imaging
-
Gualda, E. J., H. Pereira, T. Vale, M. F. Estrada, C. Brito, and N. Moreno. 2015. SPIM-fluid: open source light-sheet based platform for high-throughput imaging. Biomed. Opt. Express 6: 4447-4456.
-
(2015)
Biomed. Opt. Express
, vol.6
, pp. 4447-4456
-
-
Gualda, E.J.1
Pereira, H.2
Vale, T.3
Estrada, M.F.4
Brito, C.5
Moreno, N.6
-
28
-
-
84870855300
-
Quantitative analysis of embryogenesis: A perspective for light sheet microscopy
-
Höckendorf, B., T. Thumberger, and J. Wittbrodt. 2012. Quantitative analysis of embryogenesis: a perspective for light sheet microscopy. Dev. Cell 23: 1111-1120.
-
(2012)
Dev. Cell
, vol.23
, pp. 1111-1120
-
-
Höckendorf, B.1
Thumberger, T.2
Wittbrodt, J.3
-
29
-
-
33846888749
-
Controlled light-exposure microscopy reduces photobleaching and phototoxicity in fluorescence live-cell imaging
-
Hoebe, R. A., C. H. Van Oven, T. W. J. Gadella Jr., P. B. Dhonukshe, C. J. F. Van Noorden, and E. M. M. Manders. 2007. Controlled light-exposure microscopy reduces photobleaching and phototoxicity in fluorescence live-cell imaging. Nat. Biotechnol. 25: 249-253.
-
(2007)
Nat. Biotechnol
, vol.25
, pp. 249-253
-
-
Hoebe, R.A.1
Van Oven, C.H.2
Gadella, T.W.J.3
Dhonukshe, P.B.4
Van Noorden, C.J.F.5
Manders, E.M.M.6
-
30
-
-
40349093061
-
Fast threedimensional fluorescence imaging of activity in neural populations by objective-coupled planar illumination microscopy
-
Holekamp, T. F., D. Turaga, and T. E. Holy. 2008. Fast threedimensional fluorescence imaging of activity in neural populations by objective-coupled planar illumination microscopy. Neuron 57: 661-672.
-
(2008)
Neuron
, vol.57
, pp. 661-672
-
-
Holekamp, T.F.1
Turaga, D.2
Holy, T.E.3
-
31
-
-
84902096048
-
Development and applications of CRISPR-Cas9 for genome engineering
-
Hsu, P. D., E. S. Lander, and F. Zhang. 2014. Development and applications of CRISPR-Cas9 for genome engineering. Cell 157: 1262-1278.
-
(2014)
Cell
, vol.157
, pp. 1262-1278
-
-
Hsu, P.D.1
Lander, E.S.2
Zhang, F.3
-
32
-
-
84859842913
-
Slicing embryos gently with laser light sheets
-
Huisken, J. 2012. Slicing embryos gently with laser light sheets. Bioessays 34: 406-411.
-
(2012)
Bioessays
, vol.34
, pp. 406-411
-
-
Huisken, J.1
-
33
-
-
38449091551
-
Even fluorescence excitation by multidirectional selective plane illumination microscopy (MSPIM)
-
Huisken, J., and D. Y. R. Stainier. 2007. Even fluorescence excitation by multidirectional selective plane illumination microscopy (mSPIM). Opt. Lett. 32: 2608-2610.
-
(2007)
Opt. Lett
, vol.32
, pp. 2608-2610
-
-
Huisken, J.1
Stainier, D.Y.R.2
-
34
-
-
4043090758
-
Optical sectioning deep inside live embryos by selective plane illumination microscopy
-
Huisken, J., J. Swoger, F. Del Bene, J. Wittbrodt, and E. H. K. Stelzer. 2004. Optical sectioning deep inside live embryos by selective plane illumination microscopy. Science 305: 1007-1009.
-
(2004)
Science
, vol.305
, pp. 1007-1009
-
-
Huisken, J.1
Swoger, J.2
Del Bene, F.3
Wittbrodt, J.4
Stelzer, E.H.K.5
-
35
-
-
84879980720
-
Live imaging of whole mouse embryos during gastrulation: Migration analyses of epiblast and mesodermal cells
-
Ichikawa, T., K. Nakazato, P. J. Keller, H. Kajiura-Kobayashi, E. H. K. Stelzer, A. Mochizuki, and S. Nonaka. 2013. Live imaging of whole mouse embryos during gastrulation: migration analyses of epiblast and mesodermal cells. PLoS One 8: e64506
-
(2013)
Plos One
, vol.8
-
-
Ichikawa, T.1
Nakazato, K.2
Keller, P.J.3
Kajiura-Kobayashi, H.4
Stelzer, E.H.K.5
Mochizuki, A.6
Nonaka, S.7
-
36
-
-
0001943161
-
Foundations of confocal scanned imaging in light microscopy
-
J. B. Pawley, ed. Plenum Press, New York
-
Inoué, S. 1995. Foundations of confocal scanned imaging in light microscopy. Pp. 1-17 in Handbook of Biological Confocal Microscopy, J. B. Pawley, ed. Plenum Press, New York.
-
(1995)
Handbook of Biological Confocal Microscopy
, pp. 1-17
-
-
Inoué, S.1
-
37
-
-
84936985709
-
3D print customized sample holders for live light sheet microscopy
-
Jeandupeux, E., V. Lobjois, and B. Ducommun. 2015. 3D print customized sample holders for live light sheet microscopy. Biochem. Biophys. Res. Commun. 463: 1141-1143.
-
(2015)
Biochem. Biophys. Res. Commun
, vol.463
, pp. 1141-1143
-
-
Jeandupeux, E.1
Lobjois, V.2
Ducommun, B.3
-
38
-
-
84888601834
-
Comparing phototoxicity during the development of a zebrafish craniofacial bone using confocal and light sheet fluorescence microscopy techniques
-
Jemielita, M., M. J. Taormina, A. DeLaurier, C. B. Kimmel, and R. Parthasarathy. 2013. Comparing phototoxicity during the development of a zebrafish craniofacial bone using confocal and light sheet fluorescence microscopy techniques. J. Biophotonics 6: 920-928.
-
(2013)
J. Biophotonics
, vol.6
, pp. 920-928
-
-
Jemielita, M.1
Taormina, M.J.2
Delaurier, A.3
Kimmel, C.B.4
Parthasarathy, R.5
-
39
-
-
84864813869
-
Multilayer mounting enables long-term imaging of zebrafish development in a light sheet microscope
-
Kaufmann, A., M. Mickoleit, M. Weber, and J. Huisken. 2012. Multilayer mounting enables long-term imaging of zebrafish development in a light sheet microscope. Development 139: 3242-3247.
-
(2012)
Development
, vol.139
, pp. 3242-3247
-
-
Kaufmann, A.1
Mickoleit, M.2
Weber, M.3
Huisken, J.4
-
40
-
-
84922021732
-
Visualizing whole-brain activity and development at the single-cell level using light-sheet microscopy
-
Keller, P. J., and M. B. Ahrens. 2015. Visualizing whole-brain activity and development at the single-cell level using light-sheet microscopy. Neuron 85: 462-483.
-
(2015)
Neuron
, vol.85
, pp. 462-483
-
-
Keller, P.J.1
Ahrens, M.B.2
-
41
-
-
84857687847
-
Light sheet microscopy of living or cleared specimens
-
Keller, P. J., and H.-U. Dodt. 2012. Light sheet microscopy of living or cleared specimens. Curr. Opin. Neurobiol. 22: 138-143.
-
(2012)
Curr. Opin. Neurobiol
, vol.22
, pp. 138-143
-
-
Keller, P.J.1
Dodt, H.-U.2
-
42
-
-
56449123775
-
Reconstruction of zebrafish early embryonic development by scanned light sheet microscopy
-
Keller, P. J., A. D. Schmidt, J. Wittbrodt, and E. H. K. Stelzer. 2008. Reconstruction of zebrafish early embryonic development by scanned light sheet microscopy. Science 322: 1065-1069.
-
(2008)
Science
, vol.322
, pp. 1065-1069
-
-
Keller, P.J.1
Schmidt, A.D.2
Wittbrodt, J.3
Stelzer, E.H.K.4
-
43
-
-
77955172060
-
Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy
-
Keller, P. J., A. D. Schmidt, A. Santella, K. Khairy, Z. Bao, J. Wittbrodt, and E. H. K. Stelzer. 2010. Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy. Nat. Methods 7: 637-642.
-
(2010)
Nat. Methods
, vol.7
, pp. 637-642
-
-
Keller, P.J.1
Schmidt, A.D.2
Santella, A.3
Khairy, K.4
Bao, Z.5
Wittbrodt, J.6
Stelzer, E.H.K.7
-
44
-
-
79960150491
-
Reconstructing embryonic development
-
Khairy, K., and P. J. Keller. 2011. Reconstructing embryonic development. Genesis 49: 488-513.
-
(2011)
Genesis
, vol.49
, pp. 488-513
-
-
Khairy, K.1
Keller, P.J.2
-
45
-
-
84863198418
-
Multiview light-sheet microscope for rapid in toto imaging
-
Krzic, U., S. Gunther, T. E. Saunders, S. J. Streichan, and L. Hufnagel. 2012. Multiview light-sheet microscope for rapid in toto imaging. Nat. Methods 9: 730-733.
-
(2012)
Nat. Methods
, vol.9
, pp. 730-733
-
-
Krzic, U.1
Gunther, S.2
Saunders, T.E.3
Streichan, S.J.4
Hufnagel, L.5
-
46
-
-
84988968167
-
Using stage-and slit-scanning to improve contrast and optical sectioning in dual-view inverted light sheet microscopy (DiSPIM)
-
Kumar, A., R. Christensen, M. Guo, P. Chandris, W. Duncan, Y. Wu, A. Santella, M. Moyle, P. W. Winter, D. Colün-Ramos, Z. Bao, and H. Shroff. 2016. Using stage-and slit-scanning to improve contrast and optical sectioning in dual-view inverted light sheet microscopy (diSPIM). Biol. Bull. 231: 26-39.
-
(2016)
Biol. Bull
, vol.231
, pp. 26-39
-
-
Kumar, A.1
Christensen, R.2
Guo, M.3
Chandris, P.4
Duncan, W.5
Wu, Y.6
Santella, A.7
Moyle, M.8
Winter, P.W.9
Colün-Ramos, D.10
Bao, Z.11
Shroff, H.12
-
47
-
-
79960504724
-
High-speed 2D and 3D fluorescence microscopy of cardiac myocytes
-
Kumar, S., D. Wilding, M. B. Sikkel, A. R. Lyon, K. T. MacLeod, and C. Dunsby. 2011. High-speed 2D and 3D fluorescence microscopy of cardiac myocytes. Opt. Express 19: 13839-13847.
-
(2011)
Opt. Express
, vol.19
, pp. 13839-13847
-
-
Kumar, S.1
Wilding, D.2
Sikkel, M.B.3
Lyon, A.R.4
MacLeod, K.T.5
Dunsby, C.6
-
48
-
-
76249094577
-
Dynamical models for position measurement with global shutter and rolling shutter cameras
-
Institute of Electrical and Electronics Engineers (IEEE), New York
-
Laroche, E., and S. Kagami. 2009. Dynamical models for position measurement with global shutter and rolling shutter cameras. Pp. 5204-5209 in 2009 IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS 2009). Institute of Electrical and Electronics Engineers (IEEE), New York.
-
(2009)
2009 IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS 2009)
, pp. 5204-5209
-
-
Laroche, E.1
Kagami, S.2
-
49
-
-
84939132208
-
Whole-central nervous system functional imaging in larval Drosophila
-
Lemon, W. C., S. R. Pulver, B. Höckendorf, K. McDole, K. Branson, J. Freeman, and P. J. Keller. 2015. Whole-central nervous system functional imaging in larval Drosophila. Nat. Commun. 6: 7924.
-
(2015)
Nat. Commun
, vol.6
, pp. 7924
-
-
Lemon, W.C.1
Pulver, S.R.2
Höckendorf, B.3
McDole, K.4
Branson, K.5
Freeman, J.6
Keller, P.J.7
-
50
-
-
84929483932
-
Endothelial cell self-fusion during vascular pruning
-
Lenard, A., S. Daetwyler, C. Betz, E. Ellertsdottir, H.-G. Belting, J. Huisken, and M. Affolter. 2015. Endothelial cell self-fusion during vascular pruning. PLoS Biol. 13: e1002126.
-
(2015)
Plos Biol
, vol.13
-
-
Lenard, A.1
Daetwyler, S.2
Betz, C.3
Ellertsdottir, E.4
Belting, H.-G.5
Huisken, J.6
Affolter, M.7
-
51
-
-
0037418882
-
Development and use of fluorescent protein markers in living cells
-
Lippincott-Schwartz, J., and G. H. Patterson. 2003. Development and use of fluorescent protein markers in living cells. Science 300: 87-91.
-
(2003)
Science
, vol.300
, pp. 87-91
-
-
Lippincott-Schwartz, J.1
Patterson, G.H.2
-
52
-
-
83155185449
-
Live cell division dynamics monitoring in 3D large spheroid tumor models using light sheet microscopy
-
Lorenzo, C., C. Frongia, R. Jorand, J. Fehrenbach, P. Weiss, A. Maandhui, G. Gay, B. Ducommun, and V. Lobjois. 2011. Live cell division dynamics monitoring in 3D large spheroid tumor models using light sheet microscopy. Cell Div. 6: 22.
-
(2011)
Cell Div
, vol.6
, pp. 22
-
-
Lorenzo, C.1
Frongia, C.2
Jorand, R.3
Fehrenbach, J.4
Weiss, P.5
Maandhui, A.6
Gay, G.7
Ducommun, B.8
Lobjois, V.9
-
53
-
-
84901773219
-
Multicolor two-photon light-sheet microscopy
-
Mahou, P., J. Vermot, E. Beaurepaire, and W. Supatto. 2014. Multicolor two-photon light-sheet microscopy. Nat. Methods 11: 600-601.
-
(2014)
Nat. Methods
, vol.11
, pp. 600-601
-
-
Mahou, P.1
Vermot, J.2
Beaurepaire, E.3
Supatto, W.4
-
54
-
-
80054059077
-
High-resolution live imaging of plant growth in near physiological bright conditions using light sheet fluorescence microscopy
-
Maizel, A., D. von Wangenheim, F. Federici, J. Haseloff, and E. H. K. Stelzer. 2011. High-resolution live imaging of plant growth in near physiological bright conditions using light sheet fluorescence microscopy. Plant J. 68: 377-385.
-
(2011)
Plant J
, vol.68
, pp. 377-385
-
-
Maizel, A.1
Von Wangenheim, D.2
Federici, F.3
Haseloff, J.4
Stelzer, E.H.K.5
-
55
-
-
0028382613
-
Real-time scanning slit confocal microscopy of the in vivo human cornea
-
Masters, B. R., and A. A. Thaer. 1994. Real-time scanning slit confocal microscopy of the in vivo human cornea. Appl. Opt. 33: 695-701.
-
(1994)
Appl. Opt
, vol.33
, pp. 695-701
-
-
Masters, B.R.1
Thaer, A.A.2
-
56
-
-
84907019681
-
High-resolution reconstruction of the beating zebrafish heart
-
Mickoleit, M., B. Schmid, M. Weber, F. O. Fahrbach, S. Hombach, S. Reischauer, and J. Huisken. 2014. High-resolution reconstruction of the beating zebrafish heart. Nat. Methods 11: 919-922.
-
(2014)
Nat. Methods
, vol.11
, pp. 919-922
-
-
Mickoleit, M.1
Schmid, B.2
Weber, M.3
Fahrbach, F.O.4
Hombach, S.5
Reischauer, S.6
Huisken, J.7
-
57
-
-
84941218313
-
Decoupled illumination detection in light sheet microscopy for fast volumetric imaging
-
Olarte, O. E., J. Andilla, D. Artigas, and P. Loza-Alvarez. 2015. Decoupled illumination detection in light sheet microscopy for fast volumetric imaging. Optica 2: 702-705.
-
(2015)
Optica
, vol.2
, pp. 702-705
-
-
Olarte, O.E.1
Andilla, J.2
Artigas, D.3
Loza-Alvarez, P.4
-
58
-
-
84939989940
-
Light sheetbased fluorescence microscopy (LSFM) for the quantitative imaging of cells and tissues
-
Pampaloni, F., B.-J. Chang, and E. H. K. Stelzer. 2015. Light sheetbased fluorescence microscopy (LSFM) for the quantitative imaging of cells and tissues. Cell Tissue Res. 360: 129-141.
-
(2015)
Cell Tissue Res
, vol.360
, pp. 129-141
-
-
Pampaloni, F.1
Chang, B.-J.2
Stelzer, E.H.K.3
-
59
-
-
84875497075
-
Fast functional imaging of multiple brain regions in intact zebrafish larvae using Selective Plane Illumination Microscopy
-
Panier, T., S. A. Romano, R. Olive, T. Pietri, G. Sumbre, R. Candelier, and G. Debrégeas. 2013. Fast functional imaging of multiple brain regions in intact zebrafish larvae using Selective Plane Illumination Microscopy. Front. Neural Circuits 7: 65.
-
(2013)
Front. Neural Circuits
, vol.7
, pp. 65
-
-
Panier, T.1
Romano, S.A.2
Olive, R.3
Pietri, T.4
Sumbre, G.5
Candelier, R.6
Debrégeas, G.7
-
60
-
-
84879691531
-
OpenSPIM: An open-access light-sheet microscopy platform
-
Pitrone, P. G., J. Schindelin, L. Stuyvenberg, S. Preibisch, M. Weber, K. W. Eliceiri, J. Huisken, and P. Tomancak. 2013. OpenSPIM: an open-access light-sheet microscopy platform. Nat. Methods 10: 598-599.
-
(2013)
Nat. Methods
, vol.10
, pp. 598-599
-
-
Pitrone, P.G.1
Schindelin, J.2
Stuyvenberg, L.3
Preibisch, S.4
Weber, M.5
Eliceiri, K.W.6
Huisken, J.7
Tomancak, P.8
-
61
-
-
79955586247
-
Rapid three-dimensional isotropic imaging of living cells using Bessel beam plane illumination
-
Planchon, T. A., L. Gao, D. E. Milkie, M. W. Davidson, J. A. Galbraith, C. G. Galbraith, and E. Betzig. 2011. Rapid three-dimensional isotropic imaging of living cells using Bessel beam plane illumination. Nat. Methods 8: 417-423.
-
(2011)
Nat. Methods
, vol.8
, pp. 417-423
-
-
Planchon, T.A.1
Gao, L.2
Milkie, D.E.3
Davidson, M.W.4
Galbraith, J.A.5
Galbraith, C.G.6
Betzig, E.7
-
62
-
-
65649134709
-
Globally optimal stitching of tiled 3D microscopic image acquisitions
-
Preibisch, S., S. Saalfeld, and P. Tomancak. 2009. Globally optimal stitching of tiled 3D microscopic image acquisitions. Bioinformatics 25: 1463-1465.
-
(2009)
Bioinformatics
, vol.25
, pp. 1463-1465
-
-
Preibisch, S.1
Saalfeld, S.2
Tomancak, P.3
-
63
-
-
84901836129
-
Efficient Bayesian-based multiview deconvolution
-
Preibisch, S., F. Amat, E. Stamataki, M. Sarov, R. H. Singer, E. Myers, and P. Tomancak. 2014. Efficient Bayesian-based multiview deconvolution. Nat. Methods 11: 645-648.
-
(2014)
Nat. Methods
, vol.11
, pp. 645-648
-
-
Preibisch, S.1
Amat, F.2
Stamataki, E.3
Sarov, M.4
Singer, R.H.5
Myers, E.6
Tomancak, P.7
-
64
-
-
84885901112
-
MRT letter: Light sheet based imaging flow cytometry on a microfluidic platform
-
Regmi, R., K. Mohan, and P. P. Mondal. 2013. MRT letter: light sheet based imaging flow cytometry on a microfluidic platform. Microsc. Res. Tech. 76: 1101-1107.
-
(2013)
Microsc. Res. Tech
, vol.76
, pp. 1101-1107
-
-
Regmi, R.1
Mohan, K.2
Mondal, P.P.3
-
65
-
-
84907482096
-
High resolution light-sheet based high-throughput imaging cytometry system enables visualization of intra-cellular organelles
-
Regmi, R., K. Mohan, and P. P. Mondal. 2014. High resolution light-sheet based high-throughput imaging cytometry system enables visualization of intra-cellular organelles. AIP Advances 4: 097125.
-
(2014)
AIP Advances
, vol.4
-
-
Regmi, R.1
Mohan, K.2
Mondal, P.P.3
-
66
-
-
68049104410
-
Light sheet-based fluorescence microscopy: More dimensions, more photons, and less photodamage
-
Reynaud, E. G., U. Kržiè, K. Greger, and E. H. K. Stelzer. 2008. Light sheet-based fluorescence microscopy: more dimensions, more photons, and less photodamage. HFSP J. 2: 266-275.
-
(2008)
HFSP J
, vol.2
, pp. 266-275
-
-
Reynaud, E.G.1
Kržiè, U.2
Greger, K.3
Stelzer, E.H.K.4
-
67
-
-
77955401774
-
Light sheet microscopy for single molecule tracking in living tissue
-
Ritter, J. G., R. Veith, A. Veenendaal, J. P. Siebrasse, and U. Kubitscheck. 2010. Light sheet microscopy for single molecule tracking in living tissue. PLoS One 5: e11639.
-
(2010)
Plos One
, vol.5
-
-
Ritter, J.G.1
Veith, R.2
Veenendaal, A.3
Siebrasse, J.P.4
Kubitscheck, U.5
-
68
-
-
84900314611
-
CRISPR-Cas systems for editing, regulating and targeting genomes
-
Sander, J. D., and J. K. Joung. 2014. CRISPR-Cas systems for editing, regulating and targeting genomes. Nat. Biotechnol. 32: 347-355.
-
(2014)
Nat. Biotechnol
, vol.32
, pp. 347-355
-
-
Sander, J.D.1
Joung, J.K.2
-
69
-
-
79953778457
-
Light sheet fluorescence microscopy: A review
-
Santi, P. A. 2011. Light sheet fluorescence microscopy: a review. J. Histochem. Cytochem. 59: 129-138.
-
(2011)
J. Histochem. Cytochem
, vol.59
, pp. 129-138
-
-
Santi, P.A.1
-
70
-
-
85032750912
-
Deconvolution methods for 3-D fluorescence microscopy images
-
Sarder, P., and A. Nehorai. 2006. Deconvolution methods for 3-D fluorescence microscopy images. IEEE Signal Processing Magazine 23: 32-45.
-
(2006)
IEEE Signal Processing Magazine
, vol.23
, pp. 32-45
-
-
Sarder, P.1
Nehorai, A.2
-
71
-
-
84938878004
-
The smart and gentle microscope
-
Scherf, N., and J. Huisken. 2015. The smart and gentle microscope. Nat. Biotechnol. 33: 815-818.
-
(2015)
Nat. Biotechnol
, vol.33
, pp. 815-818
-
-
Scherf, N.1
Huisken, J.2
-
72
-
-
42549123659
-
High-speed imaging of developing heart valves reveals interplay of morphogenesis and function
-
Scherz, P. J., J. Huisken, P. Sahai-Hernandez, and D. Y. R. Stainier. 2008. High-speed imaging of developing heart valves reveals interplay of morphogenesis and function. Development 135: 1179-1187.
-
(2008)
Development
, vol.135
, pp. 1179-1187
-
-
Scherz, P.J.1
Huisken, J.2
Sahai-Hernandez, P.3
Stainier, D.Y.R.4
-
73
-
-
84947790214
-
Real-time multi-view deconvolution
-
Schmid, B., and J. Huisken. 2015. Real-time multi-view deconvolution. Bioinformatics 31: 3398-3400.
-
(2015)
Bioinformatics
, vol.31
, pp. 3398-3400
-
-
Schmid, B.1
Huisken, J.2
-
74
-
-
84887420049
-
High-speed panoramic light-sheet microscopy reveals global endodermal cell dynamics
-
Schmid, B., G. Shah, N. Scherf, M. Weber, K. Thierbach, C. P. Campos, I. Roeder, P. Aanstad, and J. Huisken. 2013. High-speed panoramic light-sheet microscopy reveals global endodermal cell dynamics. Nat. Commun. 4: 2207.
-
(2013)
Nat. Commun
, vol.4
, pp. 2207
-
-
Schmid, B.1
Shah, G.2
Scherf, N.3
Weber, M.4
Thierbach, K.5
Campos, C.P.6
Roeder, I.7
Aanstad, P.8
Huisken, J.9
-
75
-
-
79959481655
-
Quantitation of cellular dynamics in growing Arabidopsis roots with light sheet microscopy
-
Sena, G., Z. Frentz, K. D. Birnbaum, and S. Leibler. 2011. Quantitation of cellular dynamics in growing Arabidopsis roots with light sheet microscopy. PLoS One 6: e21303.
-
(2011)
Plos One
, vol.6
-
-
Sena, G.1
Frentz, Z.2
Birnbaum, K.D.3
Leibler, S.4
-
76
-
-
84900170520
-
Comparison of widefield/deconvolution and confocal microscopy for three-dimensional imaging
-
3rd ed., J. B. Pawley, ed. Springer, New York
-
Shaw, P. J. 2006. Comparison of widefield/deconvolution and confocal microscopy for three-dimensional imaging. Pp. 453-467 in Handbook of Biological Confocal Microscopy, 3rd ed., J. B. Pawley, ed. Springer, New York.
-
(2006)
Handbook of Biological Confocal Microscopy
, pp. 453-467
-
-
Shaw, P.J.1
-
77
-
-
0030029881
-
Influence of the triplet excited state on the photobleaching kinetics of fluorescein in microscopy
-
Song, L., C. A. Varma, J. W. Verhoeven, and H. J. Tanke. 1996. Influence of the triplet excited state on the photobleaching kinetics of fluorescein in microscopy. Biophys. J. 70: 2959-2968.
-
(1996)
Biophys. J
, vol.70
, pp. 2959-2968
-
-
Song, L.1
Varma, C.A.2
Verhoeven, J.W.3
Tanke, H.J.4
-
78
-
-
84956704095
-
Inverted light-sheet microscope for imaging mouse pre-implantation development
-
Strnad, P., S. Gunther, J. Reichmann, U. Krzic, B. Balazs, G. de Medeiros, N. Norlin, T. Hiiragi, L. Hufnagel, and J. Ellenberg. 2015. Inverted light-sheet microscope for imaging mouse pre-implantation development. Nat. Methods 13: 139-142.
-
(2015)
Nat. Methods
, vol.13
, pp. 139-142
-
-
Strnad, P.1
Gunther, S.2
Reichmann, J.3
Krzic, U.4
Balazs, B.5
De Medeiros, G.6
Norlin, N.7
Hiiragi, T.8
Hufnagel, L.9
Ellenberg, J.10
-
79
-
-
84901469160
-
Non-invasive long-term fluorescence live imaging of Tribolium castaneum embryos
-
Strobl, F., and E. H. K. Stelzer. 2014. Non-invasive long-term fluorescence live imaging of Tribolium castaneum embryos. Development 141: 2331-2338.
-
(2014)
Development
, vol.141
, pp. 2331-2338
-
-
Strobl, F.1
Stelzer, E.H.K.2
-
80
-
-
84870828272
-
High-speed imaging of amoeboid movements using light-sheet microscopy
-
Takao, D., A. Taniguchi, T. Takeda, S. Sonobe, and S. Nonaka. 2012. High-speed imaging of amoeboid movements using light-sheet microscopy. PLoS One 7: e50846.
-
(2012)
Plos One
, vol.7
-
-
Takao, D.1
Taniguchi, A.2
Takeda, T.3
Sonobe, S.4
Nonaka, S.5
-
81
-
-
84866348016
-
Investigating bacterial-animal symbioses with light sheet microscopy
-
Taormina, M. J., M. Jemielita, W. Z. Stephens, A. R. Burns, J. V. Troll, R. Parthasarathy, and K. Guillemin. 2012. Investigating bacterial-animal symbioses with light sheet microscopy. Biol. Bull. 223: 7-20.
-
(2012)
Biol. Bull
, vol.223
, pp. 7-20
-
-
Taormina, M.J.1
Jemielita, M.2
Stephens, W.Z.3
Burns, A.R.4
Troll, J.V.5
Parthasarathy, R.6
Guillemin, K.7
-
82
-
-
84859400880
-
Real-time optical gating for threedimensional beating heart imaging
-
Taylor, J. M., C. D. Saunter, G. D. Love, J. M. Girkin, D. J. Henderson, and B. Chaudhry. 2011. Real-time optical gating for threedimensional beating heart imaging. J. Biomed. Opt. 16: 116021.
-
(2011)
J. Biomed. Opt
, vol.16
-
-
Taylor, J.M.1
Saunter, C.D.2
Love, G.D.3
Girkin, J.M.4
Henderson, D.J.5
Chaudhry, B.6
-
83
-
-
82455220240
-
Shedding light on the system: Studying embryonic development with light sheet microscopy
-
Tomer, R., K. Khairy, and P. J. Keller. 2011. Shedding light on the system: studying embryonic development with light sheet microscopy. Curr. Opin. Genet. Dev. 21: 558-565.
-
(2011)
Curr. Opin. Genet. Dev
, vol.21
, pp. 558-565
-
-
Tomer, R.1
Khairy, K.2
Keller, P.J.3
-
84
-
-
84863195203
-
Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy
-
Tomer, R., K. Khairy, F. Amat, and P. J. Keller. 2012. Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy. Nat. Methods 9: 755-763.
-
(2012)
Nat. Methods
, vol.9
, pp. 755-763
-
-
Tomer, R.1
Khairy, K.2
Amat, F.3
Keller, P.J.4
-
85
-
-
84950267885
-
SPED light sheet microscopy: Fast mapping of biological system structure and function
-
Tomer, R., M. Lovett-Barron, I. Kauvar, A. Andalman, V. M. Burns, S. Sankaran, L. Grosenick, M. Broxton, S. Yang, and K. Deisseroth. 2015. SPED light sheet microscopy: fast mapping of biological system structure and function. Cell 163: 1796-1806.
-
(2015)
Cell
, vol.163
, pp. 1796-1806
-
-
Tomer, R.1
Lovett-Barron, M.2
Kauvar, I.3
Andalman, A.4
Burns, V.M.5
Sankaran, S.6
Grosenick, L.7
Broxton, M.8
Yang, S.9
Deisseroth, K.10
-
86
-
-
84965191403
-
Whole-body tissue stabilization and selective extractions via tissue-hydrogel hybrids for high-resolution intact circuit mapping and phenotyping
-
Treweek, J. B., K. Y. Chan, N. C. Flytzanis, B. Yang, B. E. Deverman, A. Greenbaum, A. Lignell, C. Xiao, L. Cai, M. S. Ladinsky et al. 2015. Whole-body tissue stabilization and selective extractions via tissue-hydrogel hybrids for high-resolution intact circuit mapping and phenotyping. Nat. Protoc. 10: 1860-1896.
-
(2015)
Nat. Protoc
, vol.10
, pp. 1860-1896
-
-
Treweek, J.B.1
Chan, K.Y.2
Flytzanis, N.C.3
Yang, B.4
Deverman, B.E.5
Greenbaum, A.6
Lignell, A.7
Xiao, C.8
Cai, L.9
Ladinsky, M.S.10
-
87
-
-
84856660138
-
Organization of vomeronasal sensory coding revealed by fast volumetric calcium imaging
-
Turaga, D., and T. E. Holy. 2012. Organization of vomeronasal sensory coding revealed by fast volumetric calcium imaging. J. Neurosci. 32: 1612-1621.
-
(2012)
J. Neurosci
, vol.32
, pp. 1612-1621
-
-
Turaga, D.1
Holy, T.E.2
-
88
-
-
84908409740
-
Quantitative imaging of cell dynamics in mouse embryos using light-sheet microscopy
-
Udan, R. S., V. G. Piazza, C.-W. Hsu, A.-K. Hadjantonakis, and M. E. Dickinson. 2014. Quantitative imaging of cell dynamics in mouse embryos using light-sheet microscopy. Development 141: 4406-4414.
-
(2014)
Development
, vol.141
, pp. 4406-4414
-
-
Udan, R.S.1
Piazza, V.G.2
Hsu, C.-W.3
Hadjantonakis, A.-K.4
Dickinson, M.E.5
-
89
-
-
84899971983
-
Iz˘ma´r, F. J. Gunn-Moore, and K. Dholakia
-
Vettenburg, T., H. I. C. Dalgarno, J. Nylk, C. Coll-Llado´, D. E. K. Ferrier, T. C˘ iz˘ma´r, F. J. Gunn-Moore, and K. Dholakia. 2014. Light-sheet microscopy using an Airy beam. Nat. Methods 11: 541-544.
-
(2014)
Light-Sheet Microscopy Using an Airy Beam. Nat. Methods
, vol.11
, pp. 541-544
-
-
Vettenburg, T.1
Dalgarno, H.I.C.2
Nylk, J.3
Coll-Llado´, C.4
Ferrier, D.E.K.5
C˘, T.6
-
90
-
-
82455218973
-
Light sheet microscopy for real-time developmental biology
-
Weber, M., and J. Huisken. 2011. Light sheet microscopy for real-time developmental biology. Curr. Opin. Genet. Dev. 21: 566-572.
-
(2011)
Curr. Opin. Genet. Dev
, vol.21
, pp. 566-572
-
-
Weber, M.1
Huisken, J.2
-
91
-
-
84902962799
-
Light sheet microscopy
-
J. C. Waters and T. Wittman, eds. Elsevier, New York
-
Weber, M., M. Mickoleit, and J. Huisken. 2014. Light sheet microscopy. Pp. 193-215 in Quantitative Imaging in Cell Biology, Methods in Cell Biology 123, J. C. Waters and T. Wittman, eds. Elsevier, New York.
-
(2014)
Quantitative Imaging in Cell Biology, Methods in Cell Biology
, vol.123
, pp. 193-215
-
-
Weber, M.1
Mickoleit, M.2
Huisken, J.3
-
92
-
-
84879407063
-
A light sheet based high throughput 3D-imaging flow cytometer for phytoplankton analysis
-
Wu, J., J. Li, and R. K. Y. Chan. 2013. A light sheet based high throughput 3D-imaging flow cytometer for phytoplankton analysis. Opt. Express 21: 14474-14480.
-
(2013)
Opt. Express
, vol.21
, pp. 14474-14480
-
-
Wu, J.1
Li, J.2
Chan, R.K.Y.3
-
93
-
-
80055070317
-
Inverted selective plane illumination microscopy (ISPIM) enables coupled cell identity lineaging and neurodevelopmental imaging in Caenorhabditis elegans
-
Wu, Y., A. Ghitani, R. Christensen, A. Santella, Z. Du, G. Rondeau, Z. Bao, D. Colón-Ramos, and H. Shroff. 2011. Inverted selective plane illumination microscopy (iSPIM) enables coupled cell identity lineaging and neurodevelopmental imaging in Caenorhabditis elegans. Proc. Natl. Acad. Sci. USA 108: 17708-17713.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 17708-17713
-
-
Wu, Y.1
Ghitani, A.2
Christensen, R.3
Santella, A.4
Du, Z.5
Rondeau, G.6
Bao, Z.7
Colón-Ramos, D.8
Shroff, H.9
-
94
-
-
84887415312
-
Spatially isotropic four-dimensional imaging with dual-view plane illumination microscopy
-
Wu, Y., P. Wawrzusin, J. Senseney, R. S. Fischer, R. Christensen, A. Santella, A. G. York, P. W. Winter, C. M. Waterman, Z. Bao et al. 2013. Spatially isotropic four-dimensional imaging with dual-view plane illumination microscopy. Nat. Biotechnol. 31: 1032-1038.
-
(2013)
Nat. Biotechnol
, vol.31
, pp. 1032-1038
-
-
Wu, Y.1
Wawrzusin, P.2
Senseney, J.3
Fischer, R.S.4
Christensen, R.5
Santella, A.6
York, A.G.7
Winter, P.W.8
Waterman, C.M.9
Bao, Z.10
|