메뉴 건너뛰기




Volumn 12, Issue 8, 2016, Pages

Efficient Reconstruction of Predictive Consensus Metabolic Network Models

Author keywords

[No Author keywords available]

Indexed keywords

METABOLISM;

EID: 84988961501     PISSN: 1553734X     EISSN: 15537358     Source Type: Journal    
DOI: 10.1371/journal.pcbi.1005085     Document Type: Article
Times cited : (15)

References (51)
  • 1
    • 75149129569 scopus 로고    scopus 로고
    • A protocol for generating a high-quality genome-scale metabolic reconstruction
    • Thiele I, Palsson BØ, (2010) A protocol for generating a high-quality genome-scale metabolic reconstruction. Nature protocols5: 93–121. doi: 10.1038/nprot.2009.20320057383
    • (2010) Nature protocols , vol.5 , pp. 93-121
    • Thiele, I.1    Palsson, B.Ø.2
  • 3
    • 35348934254 scopus 로고    scopus 로고
    • Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data
    • 17573341,: –
    • Oh Y-K, Palsson BO, Park SM, Schilling CH, Mahadevan R, (2007) Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data. Journal of Biological Chemistry282: 28791–28799. 17573341
    • (2007) Journal of Biological Chemistry , vol.282 , pp. 28791-28799
    • Oh, Y.-K.1    Palsson, B.O.2    Park, S.M.3    Schilling, C.H.4    Mahadevan, R.5
  • 4
    • 79951745716 scopus 로고    scopus 로고
    • iMAT: an integrative metabolic analysis tool
    • 21081510,: –
    • Zur H, Ruppin E, Shlomi T, (2010) iMAT: an integrative metabolic analysis tool. Bioinformatics26: 3140–3142. doi: 10.1093/bioinformatics/btq60221081510
    • (2010) Bioinformatics , vol.26 , pp. 3140-3142
    • Zur, H.1    Ruppin, E.2    Shlomi, T.3
  • 5
    • 78049255973 scopus 로고    scopus 로고
    • Probabilistic integrative modeling of genome-scale metabolic and regulatory networks in Escherichia coli and Mycobacterium tuberculosis
    • Chandrasekaran S, Price ND, (2010) Probabilistic integrative modeling of genome-scale metabolic and regulatory networks in Escherichia coli and Mycobacterium tuberculosis. Proceedings of the National Academy of Sciences107: 17845–17850.
    • (2010) Proceedings of the National Academy of Sciences , vol.107 , pp. 17845-17850
    • Chandrasekaran, S.1    Price, N.D.2
  • 6
    • 70049110173 scopus 로고    scopus 로고
    • Interpreting expression data with metabolic flux models: predicting Mycobacterium tuberculosis mycolic acid production
    • 19714220,.:
    • Colijn C, Brandes A, Zucker J, Lun DS, Weiner B, et al. (2009) Interpreting expression data with metabolic flux models: predicting Mycobacterium tuberculosis mycolic acid production. PLoS computational biology5: e1000489. doi: 10.1371/journal.pcbi.100048919714220
    • (2009) PLoS computational biology , vol.5 , pp. e1000489
    • Colijn, C.1    Brandes, A.2    Zucker, J.3    Lun, D.S.4    Weiner, B.5
  • 7
    • 34548861262 scopus 로고    scopus 로고
    • GSMN-TB: a web-based genome-scale network model of Mycobacterium tuberculosis metabolism
    • 17521419,.:
    • Beste DJV, Hooper T, Stewart G, Bonde B, Avignone-Rossa C, et al. (2007) GSMN-TB: a web-based genome-scale network model of Mycobacterium tuberculosis metabolism. Genome biology8: R89. 17521419
    • (2007) Genome biology , vol.8 , pp. R89
    • Beste, D.J.V.1    Hooper, T.2    Stewart, G.3    Bonde, B.4    Avignone-Rossa, C.5
  • 8
    • 55449096123 scopus 로고    scopus 로고
    • Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology
    • 18974823,.:
    • Puchalka J, Oberhardt MA, Godinho M, Bielecka A, Regenhardt D, et al. (2008) Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology. PLoS computational biology4: e1000210. doi: 10.1371/journal.pcbi.100021018974823
    • (2008) PLoS computational biology , vol.4 , pp. e1000210
    • Puchalka, J.1    Oberhardt, M.A.2    Godinho, M.3    Bielecka, A.4    Regenhardt, D.5
  • 9
    • 84890290025 scopus 로고    scopus 로고
    • Genome-scale metabolic reconstructions of multiple Escherichia coli strains highlight strain-specific adaptations to nutritional environments
    • Monk JM, Charusanti P, Aziz RK, Lerman JA, Premyodhin N, et al. (2013) Genome-scale metabolic reconstructions of multiple Escherichia coli strains highlight strain-specific adaptations to nutritional environments. Proceedings of the National Academy of Sciences110: 20338–20343.
    • (2013) Proceedings of the National Academy of Sciences , vol.110 , pp. 20338-20343
    • Monk, J.M.1    Charusanti, P.2    Aziz, R.K.3    Lerman, J.A.4    Premyodhin, N.5
  • 10
    • 79953649492 scopus 로고    scopus 로고
    • Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis
    • 21483480,:
    • Oberhardt MA, Puchalka J, Martins dos Santos VAP, Papin JA, (2011) Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis. PLoS Comput Biol7: e1001116. doi: 10.1371/journal.pcbi.100111621483480
    • (2011) PLoS Comput Biol , vol.7 , pp. e1001116
    • Oberhardt, M.A.1    Puchalka, J.2    Martins dos Santos, V.A.P.3    Papin, J.A.4
  • 11
    • 84890893309 scopus 로고    scopus 로고
    • Comparative metabolic systems analysis of pathogenic Burkholderia
    • 24163337,: –
    • Bartell JA, Yen P, Varga JJ, Goldberg JB, Papin JA, (2014) Comparative metabolic systems analysis of pathogenic Burkholderia. Journal of bacteriology196: 210–226. doi: 10.1128/JB.00997-1324163337
    • (2014) Journal of bacteriology , vol.196 , pp. 210-226
    • Bartell, J.A.1    Yen, P.2    Varga, J.J.3    Goldberg, J.B.4    Papin, J.A.5
  • 12
    • 84896980593 scopus 로고    scopus 로고
    • Modeling the differences in biochemical capabilities of pseudomonas species by flux balance analysis: how good are genome-scale metabolic networks at predicting the differences?
    • Babaei P, Ghasemi-Kahrizsangi T, Marashi S-A, (2014) Modeling the differences in biochemical capabilities of pseudomonas species by flux balance analysis: how good are genome-scale metabolic networks at predicting the differences?The Scientific World Journal2014.
    • (2014) The Scientific World Journal , vol.2014
    • Babaei, P.1    Ghasemi-Kahrizsangi, T.2    Marashi, S.-A.3
  • 14
    • 34447317247 scopus 로고    scopus 로고
    • Investigating the metabolic capabilities of Mycobacterium tuberculosis H37Rv using the in silico strain iNJ661 and proposing alternative drug targets
    • 17555602,:
    • Jamshidi N, Palsson BØ, (2007) Investigating the metabolic capabilities of Mycobacterium tuberculosis H37Rv using the in silico strain iNJ661 and proposing alternative drug targets. BMC systems biology1: 26. 17555602
    • (2007) BMC systems biology , vol.1 , pp. 26
    • Jamshidi, N.1    Palsson, B.Ø.2
  • 15
    • 79959374585 scopus 로고    scopus 로고
    • Metabolic engineering of Escherichia coli for direct production of 1, 4-butanediol
    • 21602812,.: –
    • Yim H, Haselbeck R, Niu W, Pujol-Baxley C, Burgard A, et al. (2011) Metabolic engineering of Escherichia coli for direct production of 1, 4-butanediol. Nature chemical biology7: 445–452. doi: 10.1038/nchembio.58021602812
    • (2011) Nature chemical biology , vol.7 , pp. 445-452
    • Yim, H.1    Haselbeck, R.2    Niu, W.3    Pujol-Baxley, C.4    Burgard, A.5
  • 16
    • 84892788440 scopus 로고    scopus 로고
    • Constraint-based models predict metabolic and associated cellular functions
    • 24430943,: –
    • Bordbar A, Monk JM, King ZA, Palsson BO, (2014) Constraint-based models predict metabolic and associated cellular functions. Nature Reviews Genetics15: 107–120. doi: 10.1038/nrg364324430943
    • (2014) Nature Reviews Genetics , vol.15 , pp. 107-120
    • Bordbar, A.1    Monk, J.M.2    King, Z.A.3    Palsson, B.O.4
  • 18
    • 80053980945 scopus 로고    scopus 로고
    • Critical assessment of human metabolic pathway databases: a stepping stone for future integration
    • 21999653,:
    • Stobbe MD, Houten SM, Jansen GA, van Kampen AHC, Moerland PD, (2011) Critical assessment of human metabolic pathway databases: a stepping stone for future integration. BMC systems biology5: 165. doi: 10.1186/1752-0509-5-16521999653
    • (2011) BMC systems biology , vol.5 , pp. 165
    • Stobbe, M.D.1    Houten, S.M.2    Jansen, G.A.3    van Kampen, A.H.C.4    Moerland, P.D.5
  • 20
    • 53749085229 scopus 로고    scopus 로고
    • A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology
    • 18846089,.: –
    • Herrgård MJ, Swainston N, Dobson P, Dunn WB, Arga KY, et al. (2008) A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology. Nat Biotechnol26: 1155–1160. doi: 10.1038/nbt149218846089
    • (2008) Nat Biotechnol , vol.26 , pp. 1155-1160
    • Herrgård, M.J.1    Swainston, N.2    Dobson, P.3    Dunn, W.B.4    Arga, K.Y.5
  • 21
    • 77955534569 scopus 로고    scopus 로고
    • Integration of metabolic databases for the reconstruction of genome-scale metabolic networks
    • 20712863,.:
    • Radrich K, Tsuruoka Y, Dobson P, Gevorgyan A, Swainston N, et al. (2010) Integration of metabolic databases for the reconstruction of genome-scale metabolic networks. BMC Syst Biol4: 114. doi: 10.1186/1752-0509-4-11420712863
    • (2010) BMC Syst Biol , vol.4 , pp. 114
    • Radrich, K.1    Tsuruoka, Y.2    Dobson, P.3    Gevorgyan, A.4    Swainston, N.5
  • 22
    • 34347332311 scopus 로고    scopus 로고
    • A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information
    • Feist AM, Henry CS, Reed JL, Krummenacker M, Joyce AR, et al. (2007) A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information. Molecular systems biology3.
    • (2007) Molecular systems biology , vol.3
    • Feist, A.M.1    Henry, C.S.2    Reed, J.L.3    Krummenacker, M.4    Joyce, A.R.5
  • 23
    • 84855499408 scopus 로고    scopus 로고
    • MetRxn: a knowledgebase of metabolites and reactions spanning metabolic models and databases
    • 22233419,:
    • Kumar A, Suthers PF, Maranas CD, (2012) MetRxn: a knowledgebase of metabolites and reactions spanning metabolic models and databases. BMC bioinformatics13: 6. doi: 10.1186/1471-2105-13-622233419
    • (2012) BMC bioinformatics , vol.13 , pp. 6
    • Kumar, A.1    Suthers, P.F.2    Maranas, C.D.3
  • 24
    • 84877315835 scopus 로고    scopus 로고
    • A community-driven global reconstruction of human metabolism
    • 23455439,.: –
    • Thiele I, Swainston N, Fleming RMT, Hoppe A, Sahoo S, et al. (2013) A community-driven global reconstruction of human metabolism. Nat Biotechnol31: 419–425. doi: 10.1038/nbt.248823455439
    • (2013) Nat Biotechnol , vol.31 , pp. 419-425
    • Thiele, I.1    Swainston, N.2    Fleming, R.M.T.3    Hoppe, A.4    Sahoo, S.5
  • 25
    • 84920022371 scopus 로고    scopus 로고
    • Systems-level modeling of mycobacterial metabolism for the identification of new (multi-)drug targets
    • 25453232,: –
    • Rienksma RA, Suarez-Diez M, Spina L, Schaap PJ, Martins dos Santos VA, (2014) Systems-level modeling of mycobacterial metabolism for the identification of new (multi-)drug targets. Semin Immunol26: 610–622. 25453232
    • (2014) Semin Immunol , vol.26 , pp. 610-622
    • Rienksma, R.A.1    Suarez-Diez, M.2    Spina, L.3    Schaap, P.J.4    Martins dos Santos, V.A.5
  • 26
    • 84900303762 scopus 로고    scopus 로고
    • Optimizing genome-scale network reconstructions
    • 24811519,: –
    • Monk J, Nogales J, Palsson BO, (2014) Optimizing genome-scale network reconstructions. Nat Biotechnol32: 447–452. doi: 10.1038/nbt.287024811519
    • (2014) Nat Biotechnol , vol.32 , pp. 447-452
    • Monk, J.1    Nogales, J.2    Palsson, B.O.3
  • 27
    • 78651467275 scopus 로고    scopus 로고
    • A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2
    • 21244678,.:
    • Thiele I, Hyduke DR, Steeb B, Fankam G, Allen DK, et al. (2011) A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2. BMC systems biology5: 8. doi: 10.1186/1752-0509-5-821244678
    • (2011) BMC systems biology , vol.5 , pp. 8
    • Thiele, I.1    Hyduke, D.R.2    Steeb, B.3    Fankam, G.4    Allen, D.K.5
  • 28
    • 84881540727 scopus 로고    scopus 로고
    • Revising the representation of fatty acid, glycerolipid, and glycerophospholipid metabolism in the consensus model of yeast metabolism
    • 24678285,: –
    • Aung HW, Henry SA, Walker LP, (2013) Revising the representation of fatty acid, glycerolipid, and glycerophospholipid metabolism in the consensus model of yeast metabolism. Industrial Biotechnology9: 215–228. 24678285
    • (2013) Industrial Biotechnology , vol.9 , pp. 215-228
    • Aung, H.W.1    Henry, S.A.2    Walker, L.P.3
  • 29
    • 84856314687 scopus 로고    scopus 로고
    • MetaMerge: scaling up genome-scale metabolic reconstructions with application to Mycobacterium tuberculosis
    • 22292986,.:
    • Chindelevitch L, Stanley S, Hung D, Regev A, Berger B, et al. (2012) MetaMerge: scaling up genome-scale metabolic reconstructions with application to Mycobacterium tuberculosis. Genome Biol13: r6. doi: 10.1186/gb-2012-13-1-r622292986
    • (2012) Genome Biol , vol.13 , pp. r6
    • Chindelevitch, L.1    Stanley, S.2    Hung, D.3    Regev, A.4    Berger, B.5
  • 30
    • 84879452989 scopus 로고    scopus 로고
    • Consensus and conflict cards for metabolic pathway databases
    • 23803311,.:
    • Stobbe MD, Swertz MA, Thiele I, Rengaw T, van Kampen AH, et al. (2013) Consensus and conflict cards for metabolic pathway databases. BMC Syst Biol7: 50. doi: 10.1186/1752-0509-7-5023803311
    • (2013) BMC Syst Biol , vol.7 , pp. 50
    • Stobbe, M.D.1    Swertz, M.A.2    Thiele, I.3    Rengaw, T.4    van Kampen, A.H.5
  • 32
    • 0037342537 scopus 로고    scopus 로고
    • The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models
    • 12611808,.: –
    • Hucka M, Finney A, Sauro HM, Bolouri H, Doyle JC, et al. (2003) The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinformatics19: 524–531. 12611808
    • (2003) Bioinformatics , vol.19 , pp. 524-531
    • Hucka, M.1    Finney, A.2    Sauro, H.M.3    Bolouri, H.4    Doyle, J.C.5
  • 33
    • 54449092307 scopus 로고    scopus 로고
    • A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory
    • 18793442,:
    • Nogales J, Palsson BO, Thiele I, (2008) A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory. BMC systems biology2: 79. doi: 10.1186/1752-0509-2-7918793442
    • (2008) BMC systems biology , vol.2 , pp. 79
    • Nogales, J.1    Palsson, B.O.2    Thiele, I.3
  • 34
    • 63549108441 scopus 로고    scopus 로고
    • GrowMatch: An Automated Method for Reconciling In Silico/In Vivo Growth Predictions
    • Kumar VS, Maranas CD, (2009) GrowMatch: An Automated Method for Reconciling In Silico/In Vivo Growth Predictions. Plos Computational Biology5.
    • (2009) Plos Computational Biology , vol.5
    • Kumar, V.S.1    Maranas, C.D.2
  • 35
    • 0016772212 scopus 로고
    • Comparison of the predicted and observed secondary structure of T4 phage lysozyme
    • Matthews BW, (1975) Comparison of the predicted and observed secondary structure of T4 phage lysozyme. Biochimica et Biophysica Acta (BBA)-Protein Structure405: 442–451.
    • (1975) Biochimica et Biophysica Acta (BBA)-Protein Structure , vol.405 , pp. 442-451
    • Matthews, B.W.1
  • 36
    • 67650573077 scopus 로고    scopus 로고
    • iBsu1103: a new genome-scale metabolic model of Bacillus subtilis based on SEED annotations
    • 19555510,.:
    • Henry CS, Zinner JF, Cohoon MP, Stevens RL, et al. (2009) iBsu1103: a new genome-scale metabolic model of Bacillus subtilis based on SEED annotations. Genome Biol10: R69. doi: 10.1186/gb-2009-10-6-r6919555510
    • (2009) Genome Biol , vol.10 , pp. R69
    • Henry, C.S.1    Zinner, J.F.2    Cohoon, M.P.3    Stevens, R.L.4
  • 37
    • 65649126379 scopus 로고    scopus 로고
    • Connecting extracellular metabolomic measurements to intracellular flux states in yeast
    • 19321003,:
    • Mo ML, Palsson BO, Herrgård MJ, (2009) Connecting extracellular metabolomic measurements to intracellular flux states in yeast. BMC Syst Biol3: 37. doi: 10.1186/1752-0509-3-3719321003
    • (2009) BMC Syst Biol , vol.3 , pp. 37
    • Mo, M.L.1    Palsson, B.O.2    Herrgård, M.J.3
  • 38
    • 25844463806 scopus 로고    scopus 로고
    • Metabolic functions of duplicate genes in Saccharomyces cerevisiae
    • 16204195,: –
    • Kuepfer L, Sauer U, Blank LM, (2005) Metabolic functions of duplicate genes in Saccharomyces cerevisiae. Genome Res15: 1421–1430. 16204195
    • (2005) Genome Res , vol.15 , pp. 1421-1430
    • Kuepfer, L.1    Sauer, U.2    Blank, L.M.3
  • 40
    • 84865136870 scopus 로고    scopus 로고
    • An integrated open framework for thermodynamics of reactions that combines accuracy and coverage
    • 22645166,.: –
    • Noor E, Bar-Even A, Flamholz A, Lubling Y, Davidi D, et al. (2012) An integrated open framework for thermodynamics of reactions that combines accuracy and coverage. Bioinformatics28: 2037–2044. doi: 10.1093/bioinformatics/bts31722645166
    • (2012) Bioinformatics , vol.28 , pp. 2037-2044
    • Noor, E.1    Bar-Even, A.2    Flamholz, A.3    Lubling, Y.4    Davidi, D.5
  • 41
    • 66349097905 scopus 로고    scopus 로고
    • Network-based prediction of metabolic enzymes' subcellular localization
    • 19477995,: –
    • Mintz-Oron S, Aharoni A, Ruppin E, Shlomi T, (2009) Network-based prediction of metabolic enzymes' subcellular localization. Bioinformatics25: i247–i1252. doi: 10.1093/bioinformatics/btp20919477995
    • (2009) Bioinformatics , vol.25 , pp. i247-i1252
    • Mintz-Oron, S.1    Aharoni, A.2    Ruppin, E.3    Shlomi, T.4
  • 42
    • 84880783396 scopus 로고    scopus 로고
    • Reconstruction and validation of a genome-scale metabolic model for the filamentous fungus Neurospora crassa using FARM
    • 23935467,.:
    • Dreyfuss JM, Zucker JD, Hood HM, Ocasio LR, Sachs MS, et al. (2013) Reconstruction and validation of a genome-scale metabolic model for the filamentous fungus Neurospora crassa using FARM. PLoS computational biology9: e1003126. doi: 10.1371/journal.pcbi.100312623935467
    • (2013) PLoS computational biology , vol.9 , pp. e1003126
    • Dreyfuss, J.M.1    Zucker, J.D.2    Hood, H.M.3    Ocasio, L.R.4    Sachs, M.S.5
  • 43
    • 77956696072 scopus 로고    scopus 로고
    • High-throughput generation, optimization and analysis of genome-scale metabolic models
    • 20802497,.: –
    • Henry CS, DeJongh M, Best AA, Frybarger PM, Linsay B, et al. (2010) High-throughput generation, optimization and analysis of genome-scale metabolic models. Nat Biotechnol28: 977–982. doi: 10.1038/nbt.167220802497
    • (2010) Nat Biotechnol , vol.28 , pp. 977-982
    • Henry, C.S.1    DeJongh, M.2    Best, A.A.3    Frybarger, P.M.4    Linsay, B.5
  • 44
    • 79551662521 scopus 로고    scopus 로고
    • Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0
    • 21886097,.: –
    • Schellenberger J, Que R, Fleming RM, Thiele I, Orth JD, et al. (2011) Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0. Nat Protoc6: 1290–1307. doi: 10.1038/nprot.2011.30821886097
    • (2011) Nat Protoc , vol.6 , pp. 1290-1307
    • Schellenberger, J.1    Que, R.2    Fleming, R.M.3    Thiele, I.4    Orth, J.D.5
  • 45
    • 84988967589 scopus 로고    scopus 로고
    • The MathWorks I MATLAB. Natick, Massachusetts, United States
    • The MathWorks I MATLAB. Natick, Massachusetts, United States.
  • 46
    • 84988925905 scopus 로고    scopus 로고
    • Gurobi Optimization I (2015) Gurobi Optimizer Reference Manual
    • Gurobi Optimization I (2015) Gurobi Optimizer Reference Manual.
  • 47
    • 84875144546 scopus 로고    scopus 로고
    • MetaNetX.org: a website and repository for accessing, analysing and manipulating metabolic networks
    • 23357920,: –
    • Ganter M, Bernard T, Moretti S, Stelling J, Pagni M, (2013) MetaNetX.org: a website and repository for accessing, analysing and manipulating metabolic networks. Bioinformatics29: 815–816. doi: 10.1093/bioinformatics/btt03623357920
    • (2013) Bioinformatics , vol.29 , pp. 815-816
    • Ganter, M.1    Bernard, T.2    Moretti, S.3    Stelling, J.4    Pagni, M.5
  • 48
    • 52649105455 scopus 로고    scopus 로고
    • The genome-scale metabolic model iIN800 of Saccharomyces cerevisiae and its validation: a scaffold to query lipid metabolism
    • 18687109,.:
    • Nookaew I, Jewett MC, Meechai A, Thammarongtham C, Laoteng K, et al. (2008) The genome-scale metabolic model iIN800 of Saccharomyces cerevisiae and its validation: a scaffold to query lipid metabolism. BMC Syst Biol2: 71. doi: 10.1186/1752-0509-2-7118687109
    • (2008) BMC Syst Biol , vol.2 , pp. 71
    • Nookaew, I.1    Jewett, M.C.2    Meechai, A.3    Thammarongtham, C.4    Laoteng, K.5
  • 49
    • 3843128481 scopus 로고    scopus 로고
    • Reconstruction and validation of Saccharomyces cerevisiae iND750, a fully compartmentalized genome-scale metabolic model
    • 15197165,: –
    • Duarte NC, Herrgård MJ, Palsson BO, (2004) Reconstruction and validation of Saccharomyces cerevisiae iND750, a fully compartmentalized genome-scale metabolic model. Genome Res14: 1298–1309. 15197165
    • (2004) Genome Res , vol.14 , pp. 1298-1309
    • Duarte, N.C.1    Herrgård, M.J.2    Palsson, B.O.3
  • 50
    • 77957963526 scopus 로고    scopus 로고
    • Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome-wide mutant library
    • 20158506,.: –
    • Molina-Henares MA, De La Torre Jus, García-S A, Molina-Henares AJus, Herrera MC, et al. (2010) Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome-wide mutant library. Environmental Microbiology12: 1468–1485. doi: 10.1111/j.1462-2920.2010.02166.x20158506
    • (2010) Environmental Microbiology , vol.12 , pp. 1468-1485
    • Molina-Henares, M.A.1    De La Torre, J.2    García, S.A.3    Molina-Henares, A.J.4    Herrera, M.C.5
  • 51
    • 0345701347 scopus 로고    scopus 로고
    • Genes required for mycobacterial growth defined by high density mutagenesis
    • 12657046,: –
    • Sassetti CM, Boyd DH, Rubin EJ, (2003) Genes required for mycobacterial growth defined by high density mutagenesis. Molecular microbiology48: 77–84. 12657046
    • (2003) Molecular microbiology , vol.48 , pp. 77-84
    • Sassetti, C.M.1    Boyd, D.H.2    Rubin, E.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.