메뉴 건너뛰기




Volumn 38, Issue , 2016, Pages 274-284

Enhanced protein and biochemical production using CRISPRi-based growth switches

Author keywords

CRISPRi; Growth switch; Metabolic engineering; Mevalonate production; Protein production

Indexed keywords

CARBON; ESCHERICHIA COLI; MACHINERY; METABOLIC ENGINEERING;

EID: 84988911466     PISSN: 10967176     EISSN: 10967184     Source Type: Journal    
DOI: 10.1016/j.ymben.2016.09.003     Document Type: Article
Times cited : (78)

References (28)
  • 1
    • 85029195585 scopus 로고    scopus 로고
    • Production of mevalonate, isoprene, and isoprenoids using genes encoding polypeptides having thiolase, HMG-CoA synthase and HMG-CoA reductase enzymatic activities
    • 12149469
    • Beck, Z.Q., Miller, M.C., Peres, C.M., PRIMAK, Y.A., Pucci, J.P., Wells, D.H., Production of mevalonate, isoprene, and isoprenoids using genes encoding polypeptides having thiolase, HMG-CoA synthase and HMG-CoA reductase enzymatic activities. WO2, 012149469, 2012, A1.
    • (2012) WO2 , pp. A1
    • Beck, Z.Q.1    Miller, M.C.2    Peres, C.M.3    PRIMAK, Y.A.4    Pucci, J.P.5    Wells, D.H.6
  • 2
    • 84988952167 scopus 로고    scopus 로고
    • Growth Arrested Cells Useful for Producing Compounds, U
    • S. Patent No. 20,150,353,939
    • Bokinsky, G.E., Keasling, J.D., 2015. Growth Arrested Cells Useful for Producing Compounds, U.S. Patent No. 20,150,353,939.
    • (2015)
    • Bokinsky, G.E.1    Keasling, J.D.2
  • 4
    • 84920747663 scopus 로고    scopus 로고
    • Dynamic knockdown of E. coli central metabolism for redirecting fluxes of primary metabolites
    • Brockman, I.M., Prather, K.L.J., Dynamic knockdown of E. coli central metabolism for redirecting fluxes of primary metabolites. Metab. Eng. 28 (2015), 104–113, 10.1016/j.ymben.2014.12.005.
    • (2015) Metab. Eng. , vol.28 , pp. 104-113
    • Brockman, I.M.1    Prather, K.L.J.2
  • 5
    • 84898613992 scopus 로고    scopus 로고
    • Environmental dependence of stationary-phase metabolism in Bacillus subtilis and Escherichia coli
    • Chubukov, V., Sauer, U., Environmental dependence of stationary-phase metabolism in Bacillus subtilis and Escherichia coli. Appl. Environ. Microbiol. 80 (2014), 2901–2909, 10.1128/AEM.00061-14.
    • (2014) Appl. Environ. Microbiol. , vol.80 , pp. 2901-2909
    • Chubukov, V.1    Sauer, U.2
  • 6
    • 0012320836 scopus 로고
    • Studies on unbalanced growth in Escherichia coli
    • Cohen, S.S., Barner, H.D., Studies on unbalanced growth in Escherichia coli. Proc. Natl. Acad. Sci. USA 40 (1954), 885–893.
    • (1954) Proc. Natl. Acad. Sci. USA , vol.40 , pp. 885-893
    • Cohen, S.S.1    Barner, H.D.2
  • 8
    • 0027692795 scopus 로고
    • Sustaining protein synthesis in the absence of rapid cell division: an investigation of plasmid-encoded protein expression in Escherichia coli during very slow growth
    • Flickinger, M.C., Rouse, M.P., Sustaining protein synthesis in the absence of rapid cell division: an investigation of plasmid-encoded protein expression in Escherichia coli during very slow growth. Biotechnol. Prog. 9 (1993), 555–572, 10.1021/bp00024a001.
    • (1993) Biotechnol. Prog. , vol.9 , pp. 555-572
    • Flickinger, M.C.1    Rouse, M.P.2
  • 9
    • 84889099159 scopus 로고    scopus 로고
    • Microfluidic picoliter bioreactor for microbial single-cell analysis: fabrication, system setup, and operation
    • Gruenberger, A., Probst, C., Heyer, A., Wiechert, W., Frunzke, J., Kohlheyer, D., Microfluidic picoliter bioreactor for microbial single-cell analysis: fabrication, system setup, and operation. J. Vis. Exp., 2013, 50560, 10.3791/50560.
    • (2013) J. Vis. Exp. , pp. 50560
    • Gruenberger, A.1    Probst, C.2    Heyer, A.3    Wiechert, W.4    Frunzke, J.5    Kohlheyer, D.6
  • 10
    • 84862166539 scopus 로고    scopus 로고
    • A disposable picolitre bioreactor for cultivation and investigation of industrially relevant bacteria on the single cell level
    • Grünberger, A., Paczia, N., Probst, C., Schendzielorz, G., Eggeling, L., Noack, S., Wiechert, W., Kohlheyer, D., A disposable picolitre bioreactor for cultivation and investigation of industrially relevant bacteria on the single cell level. Lab Chip 12 (2012), 2060–2068, 10.1039/C2LC40156H.
    • (2012) Lab Chip , vol.12 , pp. 2060-2068
    • Grünberger, A.1    Paczia, N.2    Probst, C.3    Schendzielorz, G.4    Eggeling, L.5    Noack, S.6    Wiechert, W.7    Kohlheyer, D.8
  • 12
    • 79952705671 scopus 로고    scopus 로고
    • Utilizing high-throughput experimentation to enhance specific productivity of an E. coli T7 expression system by phosphate limitation
    • Huber, R., Roth, S., Rahmen, N., Büchs, J., Utilizing high-throughput experimentation to enhance specific productivity of an E. coli T7 expression system by phosphate limitation. BMC Biotechnol., 11, 2011, 22, 10.1186/1472-6750-11-22.
    • (2011) BMC Biotechnol. , vol.11 , pp. 22
    • Huber, R.1    Roth, S.2    Rahmen, N.3    Büchs, J.4
  • 13
    • 84886993480 scopus 로고    scopus 로고
    • CRISPR interference (CRISPRi) for sequence-specific control of gene expression
    • Larson, M.H., Gilbert, L.A., Wang, X., Lim, W.A., Weissman, J.S., Qi, L.S., CRISPR interference (CRISPRi) for sequence-specific control of gene expression. Nat. Protoc. 8 (2013), 2180–2196, 10.1038/nprot.2013.132.
    • (2013) Nat. Protoc. , vol.8 , pp. 2180-2196
    • Larson, M.H.1    Gilbert, L.A.2    Wang, X.3    Lim, W.A.4    Weissman, J.S.5    Qi, L.S.6
  • 14
    • 84861440312 scopus 로고    scopus 로고
    • Systems metabolic engineering of microorganisms for natural and non-natural chemicals
    • Lee, J.W., Na, D., Park, J.M., Lee, J., Choi, S., Lee, S.Y., Systems metabolic engineering of microorganisms for natural and non-natural chemicals. Nat. Chem. Biol. 8 (2012), 536–546, 10.1038/nchembio.970.
    • (2012) Nat. Chem. Biol. , vol.8 , pp. 536-546
    • Lee, J.W.1    Na, D.2    Park, J.M.3    Lee, J.4    Choi, S.5    Lee, S.Y.6
  • 15
    • 84926645319 scopus 로고    scopus 로고
    • Application of CRISPRi for prokaryotic metabolic engineering involving multiple genes, a case study: controllable P(3HB-co-4HB) biosynthesis
    • Lv, L., Ren, Y.-L., Chen, J.-C., Wu, Q., Chen, G.-Q., Application of CRISPRi for prokaryotic metabolic engineering involving multiple genes, a case study: controllable P(3HB-co-4HB) biosynthesis. Metab. Eng. 29 (2015), 160–168, 10.1016/j.ymben.2015.03.013.
    • (2015) Metab. Eng. , vol.29 , pp. 160-168
    • Lv, L.1    Ren, Y.-L.2    Chen, J.-C.3    Wu, Q.4    Chen, G.-Q.5
  • 16
    • 0038391517 scopus 로고    scopus 로고
    • Engineering a mevalonate pathway in Escherichia coli for production of terpenoids
    • Martin, V.J.J., Pitera, D.J., Withers, S.T., Newman, J.D., Keasling, J.D., Engineering a mevalonate pathway in Escherichia coli for production of terpenoids. Nat. Biotechnol. 21 (2003), 796–802, 10.1038/nbt833.
    • (2003) Nat. Biotechnol. , vol.21 , pp. 796-802
    • Martin, V.J.J.1    Pitera, D.J.2    Withers, S.T.3    Newman, J.D.4    Keasling, J.D.5
  • 17
    • 34247271405 scopus 로고    scopus 로고
    • DNA replication initiation: mechanisms and regulation in bacteria
    • Mott, M.L., Berger, J.M., DNA replication initiation: mechanisms and regulation in bacteria. Nat. Rev. Microbiol. 5 (2007), 343–354, 10.1038/nrmicro1640.
    • (2007) Nat. Rev. Microbiol. , vol.5 , pp. 343-354
    • Mott, M.L.1    Berger, J.M.2
  • 18
    • 84959482163 scopus 로고    scopus 로고
    • Engineering of high yield production of L-serine in Escherichia coli
    • Mundhada, H., Schneider, K., Christensen, H.B., Nielsen, A.T., Engineering of high yield production of L-serine in Escherichia coli. Biotechnol. Bioeng. 113 (2016), 807–816, 10.1002/bit.25844.
    • (2016) Biotechnol. Bioeng. , vol.113 , pp. 807-816
    • Mundhada, H.1    Schneider, K.2    Christensen, H.B.3    Nielsen, A.T.4
  • 20
    • 84874687019 scopus 로고    scopus 로고
    • Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression
    • Qi, L.S., Larson, M.H., Gilbert, L.A., Doudna, J.A., Weissman, J.S., Arkin, A.P., Lim, W.A., Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression. Cell 152 (2013), 1173–1183, 10.1016/j.cell.2013.02.022.
    • (2013) Cell , vol.152 , pp. 1173-1183
    • Qi, L.S.1    Larson, M.H.2    Gilbert, L.A.3    Doudna, J.A.4    Weissman, J.S.5    Arkin, A.P.6    Lim, W.A.7
  • 21
    • 0033009725 scopus 로고    scopus 로고
    • The quiescent-cell expression system for protein synthesis in Escherichia coli, Appl
    • Rowe, D.C., Summers, D.K., 1999. The quiescent-cell expression system for protein synthesis in Escherichia coli, Appl. Environ. Microbiol., vol. 65, p. 2710–5.
    • (1999) Environ. Microbiol. , vol.65 , pp. 2710-2715
    • Rowe, D.C.1    Summers, D.K.2
  • 22
    • 0037337680 scopus 로고    scopus 로고
    • The Escherichia coli mazEF suicide module mediates thymineless death
    • Sat, B., Reches, M., Engelberg-Kulka, H., The Escherichia coli mazEF suicide module mediates thymineless death. J. Bacteriol. 185 (2003), 1803–1807, 10.1128/JB.185.6.1803-1807.2003.
    • (2003) J. Bacteriol. , vol.185 , pp. 1803-1807
    • Sat, B.1    Reches, M.2    Engelberg-Kulka, H.3
  • 23
  • 24
    • 84899628032 scopus 로고    scopus 로고
    • Metabolic flux redirection from a central metabolic pathway toward a synthetic pathway using a metabolic toggle switch
    • Soma, Y., Tsuruno, K., Wada, M., Yokota, A., Hanai, T., Metabolic flux redirection from a central metabolic pathway toward a synthetic pathway using a metabolic toggle switch. Metab. Eng. 23 (2014), 175–184, 10.1016/j.ymben.2014.02.008.
    • (2014) Metab. Eng. , vol.23 , pp. 175-184
    • Soma, Y.1    Tsuruno, K.2    Wada, M.3    Yokota, A.4    Hanai, T.5
  • 26
    • 34548575649 scopus 로고    scopus 로고
    • Single protein production (SPP) system in Escherichia coli
    • Suzuki, M., Mao, L., Inouye, M., Single protein production (SPP) system in Escherichia coli. Nat. Protoc. 2 (2007), 1802–1810, 10.1038/nprot.2007.252.
    • (2007) Nat. Protoc. , vol.2 , pp. 1802-1810
    • Suzuki, M.1    Mao, L.2    Inouye, M.3
  • 28
    • 0032766128 scopus 로고    scopus 로고
    • Does microbial life always feed on negative entropy? Thermodynamic analysis of microbial growth
    • von Stockar, U., Liu, J.-S., Does microbial life always feed on negative entropy? Thermodynamic analysis of microbial growth. Biochim. Biophys. Acta Bioenerg. 1412 (1999), 191–211, 10.1016/S0005-2728(99)00065-1.
    • (1999) Biochim. Biophys. Acta Bioenerg. , vol.1412 , pp. 191-211
    • von Stockar, U.1    Liu, J.-S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.