Risk-conscious correction of batch effects: Maximising information extraction from high-throughput genomic datasets

BMC Bioinformatics

Volumn 17, Issue 1, 2016, Pages

  Oytam, Yalchin ^a   Sobhanmanesh, Fariborz ^a   Duesing, Konsta ^a   Bowden, Joshua C ^a   Osmond McLeod, Megan ^a   Ross, Jason ^a  

^a CSIRO   (Australia)

Author keywords

Batch effects; ComBat; Guided PCA; High throughput genomic data; Measurement noise; Principal component analysis; Singular value decomposition

Indexed keywords

DATA INTEGRATION; ECONOMIC AND SOCIAL EFFECTS; GENES; RISK ASSESSMENT; SINGULAR VALUE DECOMPOSITION; SPURIOUS SIGNAL NOISE; THROUGHPUT;

BATCH EFFECT; COMBAT; GENOMIC DATA; GUIDED PCA; MEASUREMENT NOISE;

PRINCIPAL COMPONENT ANALYSIS;

GENOMICS; HUMAN; INFORMATION RETRIEVAL; PRINCIPAL COMPONENT ANALYSIS; PROCEDURES; SEQUENCE ANALYSIS;

GENOMICS; HUMANS; INFORMATION STORAGE AND RETRIEVAL; PRINCIPAL COMPONENT ANALYSIS; SEQUENCE ANALYSIS, RNA;

EID: 84987705044     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/s12859-016-1212-5     Document Type: Article

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