-
1
-
-
84879221884
-
Multi-objective optimization methods in drug design
-
Nicolaou CA, Brown N. Multi-objective optimization methods in drug design. Drug Discov. Today Technol. 10(3), e427-e435 (2013).
-
(2013)
Drug Discov. Today Technol.
, vol.10
, Issue.3
, pp. e427-e435
-
-
Nicolaou, C.A.1
Brown, N.2
-
2
-
-
84870401411
-
Fragment based drug design: From experimental to computational approaches
-
Kumar A, Voet A, Zhang KYJ. Fragment based drug design: from experimental to computational approaches. Curr. Med. Chem. 19(30), 5128-5147 (2012).
-
(2012)
Curr. Med. Chem.
, vol.19
, Issue.30
, pp. 5128-5147
-
-
Kumar, A.1
Voet, A.2
Zhang, K.Y.J.3
-
3
-
-
84889100044
-
Fragmentbased hit identification: Thinking in 3D
-
Morley AD, Pugliese A, Birchall K et al. Fragmentbased hit identification: thinking in 3D. Drug Discov. Today. 18(23-24), 1221-1227 (2013).
-
(2013)
Drug Discov. Today
, vol.18
, Issue.23-24
, pp. 1221-1227
-
-
Morley, A.D.1
Pugliese, A.2
Birchall, K.3
-
4
-
-
84893344225
-
Increasing the coverage of medicinal chemistry-relevant space in commercial fragments screening
-
Mok NY, Brenk R, Brown N. Increasing the coverage of medicinal chemistry-relevant space in commercial fragments screening. J. Chem. Inf. Model. 54(1), 79-85 (2014).
-
(2014)
J. Chem. Inf. Model
, vol.54
, Issue.1
, pp. 79-85
-
-
Mok, N.Y.1
Brenk, R.2
Brown, N.3
-
5
-
-
84898999830
-
Twoand three-dimensional rings in drugs
-
Aldeghi M, Malhotra S, Selwood DL, Chan AWE. Twoand three-dimensional rings in drugs. Chem. Biol. Drug Des. 83(4), 450-461 (2014).
-
(2014)
Chem. Biol. Drug Des.
, vol.83
, Issue.4
, pp. 450-461
-
-
Aldeghi, M.1
Malhotra, S.2
Selwood, D.L.3
Chan, A.W.E.4
-
6
-
-
84874436407
-
3D molecular descriptors important for clinical success
-
Kombo DC, Tallapragada K, Jain R et al. 3D molecular descriptors important for clinical success. J. Chem. Inf. Model. 53(2), 327-342 (2013).
-
(2013)
J. Chem. Inf. Model
, vol.53
, Issue.2
, pp. 327-342
-
-
Kombo, D.C.1
Tallapragada, K.2
Jain, R.3
-
7
-
-
71049126548
-
Escape from flatland: Increasing saturation as an approach to improving clinical success
-
Lovering F, Bikker J, Humblet C. Escape from flatland: increasing saturation as an approach to improving clinical success. J. Med. Chem. 52(21), 6752-6756 (2009).
-
(2009)
J. Med. Chem.
, vol.52
, Issue.21
, pp. 6752-6756
-
-
Lovering, F.1
Bikker, J.2
Humblet, C.3
-
8
-
-
84874464077
-
Escape from flatland 2: Complexity and promiscuity
-
Lovering F. Escape from flatland 2: complexity and promiscuity. MedChemComm 4(3), 515-519 (2013).
-
(2013)
MedChemComm
, vol.4
, Issue.3
, pp. 515-519
-
-
Lovering, F.1
-
9
-
-
61349117968
-
The importance of discerning shape in molecular pharmacology
-
Kortagere S, Krasowski MD, Ekins S. The importance of discerning shape in molecular pharmacology. Trends Pharmacol. Sci. 30(3), 138-147 (2009).
-
(2009)
Trends Pharmacol. Sci.
, vol.30
, Issue.3
, pp. 138-147
-
-
Kortagere, S.1
Krasowski, M.D.2
Ekins, S.3
-
10
-
-
84871599677
-
Natural-product-derived fragments for fragment-based ligand discovery
-
Over B, Wetzel S, Grütter C et al. Natural-product-derived fragments for fragment-based ligand discovery. Nat. Chem. 5(1), 21-28 (2013).
-
(2013)
Nat. Chem.
, vol.5
, Issue.1
, pp. 21-28
-
-
Over, B.1
Wetzel, S.2
Grütter, C.3
-
11
-
-
80053924872
-
3,5-Dimethylisoxazoles act as acetyl-lysine-mimetic bromodomain ligands
-
Hewings DS, Wang M, Philpott M et al. 3,5-Dimethylisoxazoles act as acetyl-lysine-mimetic bromodomain ligands. J. Med. Chem. 54(19), 6761-6770 (2011).
-
(2011)
J. Med. Chem.
, vol.54
, Issue.19
, pp. 6761-6770
-
-
Hewings, D.S.1
Wang, M.2
Philpott, M.3
-
12
-
-
77952553431
-
Rational design of smallmolecule inhibitors of the LEDGF/p75-integrase interaction and HIV replication
-
Christ F, Voet A, Marchand A et al. Rational design of smallmolecule inhibitors of the LEDGF/p75-integrase interaction and HIV replication. Nat. Chem. Biol. 6(6), 442-448 (2010).
-
(2010)
Nat. Chem. Biol.
, vol.6
, Issue.6
, pp. 442-448
-
-
Christ, F.1
Voet, A.2
Marchand, A.3
-
13
-
-
84860508708
-
Bcl-2 inhibitors: Emerging drugs in cancer therapy
-
Bodur C, Basaga H. Bcl-2 inhibitors: emerging drugs in cancer therapy. Curr. Med. Chem. 19(12), 1804-1820 (2012).
-
(2012)
Curr. Med. Chem.
, vol.19
, Issue.12
, pp. 1804-1820
-
-
Bodur, C.1
Basaga, H.2
-
14
-
-
84922813362
-
Small-molecule inhibitors of the MDM2-p53 protein-protein interaction (MDM2 inhibitors) in clinical trials for cancer treatment
-
Zhao Y, Aguilar A, Bernard D, Wang S. Small-molecule inhibitors of the MDM2-p53 protein-protein interaction (MDM2 inhibitors) in clinical trials for cancer treatment. J. Med. Chem. 58(3), 1038-1052 (2015).
-
(2015)
J. Med. Chem.
, vol.58
, Issue.3
, pp. 1038-1052
-
-
Zhao, Y.1
Aguilar, A.2
Bernard, D.3
Wang, S.4
-
15
-
-
84860267055
-
Beyond size, ionization state, and lipophilicity: Influence of molecular topology on absorption, distribution, metabolism, excretion, and toxicity for druglike compounds
-
Yang Y, Engkvist O, Llinàs A, Chen H. Beyond size, ionization state, and lipophilicity: influence of molecular topology on absorption, distribution, metabolism, excretion, and toxicity for druglike compounds. J. Med. Chem. 55(8), 3667-3677 (2012).
-
(2012)
J. Med. Chem.
, vol.55
, Issue.8
, pp. 3667-3677
-
-
Yang, Y.1
Engkvist, O.2
Llinàs, A.3
Chen, H.4
-
16
-
-
79952804851
-
Improvement in aqueous solubility in small molecule drug discovery programs by disruption of molecular planarity and symmetry
-
Ishikawa M, Hashimoto Y. Improvement in aqueous solubility in small molecule drug discovery programs by disruption of molecular planarity and symmetry. J. Med. Chem. 54(6), 1539-1554 (2011).
-
(2011)
J. Med. Chem.
, vol.54
, Issue.6
, pp. 1539-1554
-
-
Ishikawa, M.1
Hashimoto, Y.2
-
18
-
-
0038512037
-
Molecular shape diversity of combinatorial libraries: A prerequisite for broad bioactivity
-
Sauer W, Schwarz MK. Molecular shape diversity of combinatorial libraries: a prerequisite for broad bioactivity. J. Chem. Inf. Comput. Sci. 43(3), 987-1003 (2003).
-
(2003)
J. Chem. Inf. Comput. Sci.
, vol.43
, Issue.3
, pp. 987-1003
-
-
Sauer, W.1
Schwarz, M.K.2
-
19
-
-
84867774202
-
Plane of best fit: A novel method to characterize the three-dimensionality of molecules
-
Firth NC, Brown N, Blagg J. Plane of best fit: a novel method to characterize the three-dimensionality of molecules. J. Chem. Inf. Model. 52(10), 2516-2525 (2012).
-
(2012)
J. Chem. Inf. Model
, vol.52
, Issue.10
, pp. 2516-2525
-
-
Firth, N.C.1
Brown, N.2
Blagg, J.3
-
20
-
-
84862192766
-
ChEMBL: A largescale bioactivity database for drug discovery
-
Gaulton A, Bellis LJ, Bento AP et al. ChEMBL: a largescale bioactivity database for drug discovery. Nucl. Acids Res. 40(D1), D1100-D1107 (2011).
-
(2011)
Nucl. Acids Res.
, vol.40
, Issue.D1
, pp. D1100-D1107
-
-
Gaulton, A.1
Bellis, L.J.2
Bento, A.P.3
-
21
-
-
33846871027
-
The scaffold tree - Visualization of the scaffold universe by hierarchical scaffold classification
-
Schuffenhauer A, Ertl P, Roggo S, Wetzel S, Koch MA, Waldmann H. The scaffold tree - visualization of the scaffold universe by hierarchical scaffold classification. J. Chem. Inf. Model. 47(1), 47-58 (2007).
-
(2007)
J. Chem. Inf. Model
, vol.47
, Issue.1
, pp. 47-58
-
-
Schuffenhauer, A.1
Ertl, P.2
Roggo, S.3
Wetzel, S.4
Koch, M.A.5
Waldmann, H.6
-
22
-
-
84934980568
-
MOARF, an integrated workflow for multiobjective optimization: Implementation, synthesis, and biological evaluation
-
Firth NC, Atrash B, Brown N, Blagg J. MOARF, an integrated workflow for multiobjective optimization: implementation, synthesis, and biological evaluation. J. Chem. Inf. Model. 55(6), 1169-1180 (2015).
-
(2015)
J. Chem. Inf. Model
, vol.55
, Issue.6
, pp. 1169-1180
-
-
Firth, N.C.1
Atrash, B.2
Brown, N.3
Blagg, J.4
-
23
-
-
78650727351
-
Conformations and 3D pharmacophore searching
-
Schwab CH. Conformations and 3D pharmacophore searching. Drug Discov. Today Technol. 7(4), e245-e253 (2010).
-
(2010)
Drug Discov. Today Technol.
, vol.7
, Issue.4
, pp. e245-e253
-
-
Schwab, C.H.1
-
24
-
-
2342586724
-
Conformational analysis of druglike molecules bound to proteins: An extensive study of ligand reorganization upon binding
-
Perola E, Charifson PS. Conformational analysis of druglike molecules bound to proteins: an extensive study of ligand reorganization upon binding. J. Med. Chem. 47(10), 2499-2510 (2004).
-
(2004)
J. Med. Chem.
, vol.47
, Issue.10
, pp. 2499-2510
-
-
Perola, E.1
Charifson, P.S.2
-
25
-
-
0028466540
-
Comparison of automatic three-dimensional model builders using 639 x-ray structures
-
Sadowski J, Gasteiger J, Klebe G. Comparison of automatic three-dimensional model builders using 639 x-ray structures. J. Chem. Inf. Model. 34(4), 1000-1008 (1994).
-
(1994)
J. Chem. Inf. Model
, vol.34
, Issue.4
, pp. 1000-1008
-
-
Sadowski, J.1
Gasteiger, J.2
Klebe, G.3
-
26
-
-
84986314259
-
-
ChEMBL v21. www.ebi.ac.uk/chembl/downloads
-
-
-
-
27
-
-
0031024171
-
Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings
-
Lipinski CA, Lombardo F, Dominy BW, Feeney PJ. Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Adv. Drug Deliv. Rev. 23(1-3), 3-25 (1997).
-
(1997)
Adv. Drug Deliv. Rev.
, vol.23
, Issue.1-3
, pp. 3-25
-
-
Lipinski, C.A.1
Lombardo, F.2
Dominy, B.W.3
Feeney, P.J.4
-
28
-
-
84864679725
-
Macrocycles in new drug discovery
-
Mallinson J, Collins I. Macrocycles in new drug discovery. Future Med. Chem. 4(11), 1409-1438 (2012).
-
(2012)
Future Med. Chem.
, vol.4
, Issue.11
, pp. 1409-1438
-
-
Mallinson, J.1
Collins, I.2
-
30
-
-
84986314591
-
-
Molecular Networks GmbH: Erlangen, Germany
-
CORINA, version 3.4, Molecular Networks GmbH: Erlangen, Germany (2013).
-
(2013)
CORINA, Version 3.4
-
-
-
34
-
-
84880922581
-
Protein pocket and ligand shape comparison and its application in virtual screening
-
Wirth M, Volkamer A, Zoete V et al. Protein pocket and ligand shape comparison and its application in virtual screening. J. Comput. Aided Mol. Des. 27(6), 511-524 (2013).
-
(2013)
J. Comput. Aided Mol. Des.
, vol.27
, Issue.6
, pp. 511-524
-
-
Wirth, M.1
Volkamer, A.2
Zoete, V.3
-
36
-
-
84969617464
-
Analysis of past and present synthetic methodologies on medicinal chemistry: Where have all the new reactions gone?
-
Brown DG, Boström J. Analysis of past and present synthetic methodologies on medicinal chemistry: where have all the new reactions gone? J. Med. Chem. 59(10), 4443-4458 (2016).
-
(2016)
J. Med. Chem.
, vol.59
, Issue.10
, pp. 4443-4458
-
-
Brown, D.G.1
Boström, J.2
-
37
-
-
80053322606
-
Scaffold diversity of exemplified medicinal chemistry space
-
Langdon SR, Brown N, Blagg J. Scaffold diversity of exemplified medicinal chemistry space. J. Chem. Inf. Model. 51(9), 2174-2185 (2011).
-
(2011)
J. Chem. Inf. Model
, vol.51
, Issue.9
, pp. 2174-2185
-
-
Langdon, S.R.1
Brown, N.2
Blagg, J.3
-
38
-
-
0035324944
-
Molecular complexity and its impact on the probability of finding leads for drug discovery
-
Hann MM, Leach AR, Harper G. Molecular complexity and its impact on the probability of finding leads for drug discovery. J. Chem. Inf. Comput. Sci. 41(3), 856-864 (2001).
-
(2001)
J. Chem. Inf. Comput. Sci.
, vol.41
, Issue.3
, pp. 856-864
-
-
Hann, M.M.1
Leach, A.R.2
Harper, G.3
|