메뉴 건너뛰기




Volumn 94, Issue 6, 2016, Pages 2506-2518

Age and feeding system (Supplemental feeding versus grazing) modulates colonic bacterial succession and host mucosal immune maturation in goats

Author keywords

Animal development process; Colon; Feeding system; Microbiota; Mucosal immune maturation

Indexed keywords

CYTOKINE; RNA 16S;

EID: 84975889776     PISSN: 00218812     EISSN: 15253163     Source Type: Journal    
DOI: 10.2527/jas.2015-0081     Document Type: Article
Times cited : (19)

References (45)
  • 1
    • 0034886143 scopus 로고    scopus 로고
    • Toll-like receptors: Critical proteins linking innate and acquired immunity
    • Akira, S., K. Takeda, and T. Kaisho. 2001. Toll-like receptors: Critical proteins linking innate and acquired immunity. Nat. Immunol. 2:675–680. doi:10.1038/90609
    • (2001) Nat. Immunol , vol.2 , pp. 675-680
    • Akira, S.1    Takeda, K.2    Kaisho, T.3
  • 2
    • 77953229243 scopus 로고    scopus 로고
    • First report of Parabacteroides goldsteinii bacteraemia in a patient with complicated intra-abdominal infection
    • Awadel-Kariem, F. M., P. Patel, J. Kapoor, J. S. Brazier, and E. J. Goldstein. 2010. First report of Parabacteroides goldsteinii bacteraemia in a patient with complicated intra-abdominal infection. Anaerobe 16:223–225. doi:10.1016/j.anaerobe.2010.01.001
    • (2010) Anaerobe , vol.16 , pp. 223-225
    • Awadel-Kariem, F.M.1    Patel, P.2    Kapoor, J.3    Brazier, J.S.4    Goldstein, E.J.5
  • 4
    • 25444518195 scopus 로고    scopus 로고
    • Cutting edge: Bacterial modulation of epithelial signaling via changes in neddylation of cullin-1
    • Collier-Hyams, L. S., V. Sloane, B. C. Batten, and A. S. Neish. 2005. Cutting edge: Bacterial modulation of epithelial signaling via changes in neddylation of cullin-1. J. Immunol. 175:4194–4198. doi:10.4049/jimmunol.175.7.4194
    • (2005) J. Immunol , vol.175 , pp. 4194-4198
    • Collier-Hyams, L.S.1    Sloane, V.2    Batten, B.C.3    Neish, A.S.4
  • 5
    • 33751016342 scopus 로고    scopus 로고
    • Development of a realtime PCR assay for monitoring anaerobic fungal and cellulolytic bacterial populations within the rumen
    • Denman, S. E., and C. S. McSweeney. 2006. Development of a realtime PCR assay for monitoring anaerobic fungal and cellulolytic bacterial populations within the rumen. FEMS Microbiol. Ecol. 58:572–582. doi:10.1111/j.1574-6941.2006.00190.x
    • (2006) FEMS Microbiol. Ecol , vol.58 , pp. 572-582
    • Denman, S.E.1    McSweeney, C.S.2
  • 6
    • 5444248493 scopus 로고    scopus 로고
    • Akkermansia muciniphila gen. Nov., sp nov., a human intestinal mucin-degrading bacterium
    • Derrien, M., E. E. Vaughan, C. M. Plugge, and W. M. de Vos. 2004. Akkermansia muciniphila gen. nov., sp nov., a human intestinal mucin-degrading bacterium. Int. J. Syst. Evol. Microbiol. 54:1469–1476. doi:10.1099/ijs.0.02873-0
    • (2004) Int. J. Syst. Evol. Microbiol , vol.54 , pp. 1469-1476
    • Derrien, M.1    Vaughan, E.E.2    Plugge, C.M.3    De Vos, W.M.4
  • 8
    • 84884904719 scopus 로고    scopus 로고
    • UPARSE: Highly accurate OTU sequences from microbial amplicon reads
    • Edgar, R. C. 2013. UPARSE: Highly accurate OTU sequences from microbial amplicon reads. Nat. Methods 10:996–998. doi:10.1038/nmeth.2604
    • (2013) Nat. Methods , vol.10 , pp. 996-998
    • Edgar, R.C.1
  • 9
    • 79961181125 scopus 로고    scopus 로고
    • UCHIME improves sensitivity and speed of chimera detection
    • Edgar, R. C., B. J. Haas, J. C. Clemente, C. Quince, and R. Knight. 2011. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 27:2194–2200. doi:10.1093/bioinformatics/btr381
    • (2011) Bioinformatics , vol.27 , pp. 2194-2200
    • Edgar, R.C.1    Haas, B.J.2    Clemente, J.C.3    Quince, C.4    Knight, R.5
  • 10
    • 34547145165 scopus 로고    scopus 로고
    • G*Power 3: A flexible statistical power analysis program for the social, behavioral, and biomedical sciences
    • Faul, F., Erdfelder, E., Lang, A.-G., & Buchner, A. (2007). G*Power 3: A flexible statistical power analysis program for the social, behavioral, and biomedical sciences. Behavior Research Methods, 39, 175-191.
    • (2007) Behavior Research Methods , vol.39 , pp. 175-191
    • Faul, F.1    Erdfelder, E.2    Lang, A.-G.3    Buchner, A.4
  • 12
    • 34548040099 scopus 로고
    • The digestion of cellulose by sheep-the extent of cellulose digestion at successive levels of the alimentary tract
    • Gray, F. V. 1947. The digestion of cellulose by sheep-the extent of cellulose digestion at successive levels of the alimentary tract. J. Exp. Biol. 24:15–19.
    • (1947) J. Exp. Biol , vol.24 , pp. 15-19
    • Gray, F.V.1
  • 13
    • 0035459250 scopus 로고    scopus 로고
    • Past, present, and future perspectives of small ruminant dairy research
    • Haenlein, G. F. 2001. Past, present, and future perspectives of small ruminant dairy research. J. Dairy Sci. 84:2097–2115. doi:10.3168/jds.S0022-0302(01)74655-3
    • (2001) J. Dairy Sci , vol.84 , pp. 2097-2115
    • Haenlein, G.F.1
  • 14
    • 84882620172 scopus 로고    scopus 로고
    • Rumen bacterial, archaeal, and fungal diversity of dairy cows in response to ingestion of lauric or myristic acid
    • Hristov, A. N., T. R. Callaway, C. Lee, and S. E. Dowd. 2012. Rumen bacterial, archaeal, and fungal diversity of dairy cows in response to ingestion of lauric or myristic acid. J. Anim. Sci. 90:4449–4457. doi:10.2527/jas.2011-4624
    • (2012) J. Anim. Sci , vol.90 , pp. 4449-4457
    • Hristov, A.N.1    Callaway, T.R.2    Lee, C.3    Dowd, S.E.4
  • 15
    • 84878276427 scopus 로고    scopus 로고
    • Exploring the bovine rumen bacterial community from birth to adulthood
    • Jami, E., A. Israel, A. Kotser, and I. Mizrahi. 2013. Exploring the bovine rumen bacterial community from birth to adulthood. ISME J. 7:1069–1079. doi:10.1038/ismej.2013.2
    • (2013) ISME J , vol.7 , pp. 1069-1079
    • Jami, E.1    Israel, A.2    Kotser, A.3    Mizrahi, I.4
  • 16
    • 84903830699 scopus 로고    scopus 로고
    • In vitro evaluation of effects of gut region and fiber structure on the intestinal dominant bacterial diversity and functional bacterial species
    • Jiao, J. Z., Q. Lu, Z. L. Tan, L. L. Guan, C. S. Zhou, S. X. Tang, and X. F. Han. 2014a. In vitro evaluation of effects of gut region and fiber structure on the intestinal dominant bacterial diversity and functional bacterial species. Anaerobe 28:168–177. doi:10.1016/j.anaerobe.2014.06.008
    • (2014) Anaerobe , vol.28 , pp. 168-177
    • Jiao, J.Z.1    Lu, Q.2    Tan, Z.L.3    Guan, L.L.4    Zhou, C.S.5    Tang, S.X.6    Han, X.F.7
  • 17
    • 84901767651 scopus 로고    scopus 로고
    • In vitro evaluation on neutral detergent fiber and cellulose digestion by post-ruminal microorganisms in goats
    • Jiao, J. Z., P. P. Wang, Z. X. He, S. X. Tang, C. S. Zhou, X. F. Han, M. Wang, D. Q. Wu, J. L. Kang, and Z. L. Tan. 2014b. In vitro evaluation on neutral detergent fiber and cellulose digestion by post-ruminal microorganisms in goats. J. Sci. Food Agric. 94:1745–1752. doi:10.1002/jsfa.6485
    • (2014) J. Sci. Food Agric , vol.94 , pp. 1745-1752
    • Jiao, J.Z.1    Wang, P.P.2    He, Z.X.3    Tang, S.X.4    Zhou, C.S.5    Han, X.F.6    Wang, M.7    Wu, D.Q.8    Kang, J.L.9    Tan, Z.L.10
  • 18
    • 84975744009 scopus 로고    scopus 로고
    • Postnatal bacterial succession and functional establishment of hindgut in supplemental feeding and grazing goats
    • Jiao, J. Z., Z. Wang, L. L. Guan, Z. L. Tan, X. F. Han, S. X. Tang, and C. S. Zhou. 2015. Postnatal bacterial succession and functional establishment of hindgut in supplemental feeding and grazing goats. J. Anim. Sci. 93:3528–3538. doi:10.2527/jas.2014-8706
    • (2015) J. Anim. Sci , vol.93 , pp. 3528-3538
    • Jiao, J.Z.1    Wang, Z.2    Guan, L.L.3    Tan, Z.L.4    Han, X.F.5    Tang, S.X.6    Zhou, C.S.7
  • 19
    • 84906936433 scopus 로고    scopus 로고
    • Recent advances in adherence and invasion of pathogenic Escherichia coli
    • Kalita, A., J. Hu, and A. G. Torres. 2014. Recent advances in adherence and invasion of pathogenic Escherichia coli. Curr. Opin. Infect. Dis. 27:459–464. doi:10.1097/QCO.0000000000000092
    • (2014) Curr. Opin. Infect. Dis , vol.27 , pp. 459-464
    • Kalita, A.1    Hu, J.2    Torres, A.G.3
  • 20
    • 77951260924 scopus 로고    scopus 로고
    • The role of pattern-recognition receptors in innate immunity: Update on Toll-like receptors
    • Kawai, T., and S. Akira. 2010. The role of pattern-recognition receptors in innate immunity: Update on Toll-like receptors. Nat. Immunol. 11:373–384. doi:10.1038/ni.1863
    • (2010) Nat. Immunol , vol.11 , pp. 373-384
    • Kawai, T.1    Akira, S.2
  • 21
    • 0016043840 scopus 로고
    • Ponies vs. Steers: Microbial and chemical characteristics of intestinal ingesta
    • Kern, D. L., L. L. Slyter, E. C. Leffel, J. M. Weaver, and R. R. Oltjen. 1974. Ponies vs. steers: Microbial and chemical characteristics of intestinal ingesta. J. Anim. Sci. 38:559–564.
    • (1974) J. Anim. Sci , vol.38 , pp. 559-564
    • Kern, D.L.1    Slyter, L.L.2    Leffel, E.C.3    Weaver, J.M.4    Oltjen, R.R.5
  • 22
    • 0034782218 scopus 로고    scopus 로고
    • Ecologically meaningful transformations for ordination of species data
    • Legendre, P., and E. Gallagher. 2001. Ecologically meaningful transformations for ordination of species data. Oecologia 129:271–280. doi:10.1007/s004420100716
    • (2001) Oecologia , vol.129 , pp. 271-280
    • Legendre, P.1    Gallagher, E.2
  • 24
    • 84855275498 scopus 로고    scopus 로고
    • Characterization of the rumen microbiota of pre-ruminant calves using metagenomic tools
    • Li, R. W., E. E. Connor, C. Li, R. L. Baldwin, and M. E. Sparks. 2012. Characterization of the rumen microbiota of pre-ruminant calves using metagenomic tools. Environ. Microbiol. 14:129–139. doi:10.1111/j.1462-2920.2011.02543.x
    • (2012) Environ. Microbiol , vol.14 , pp. 129-139
    • Li, R.W.1    Connor, E.E.2    Li, C.3    Baldwin, R.L.4    Sparks, M.E.5
  • 26
    • 0242657434 scopus 로고    scopus 로고
    • Ecology of uncultivated Oscillospira species in the rumen of cattle, sheep, and reindeer as assessed by microscopy and molecular approaches
    • Mackie, R. I., R. I. Aminov, W. P. Hu, A. V. Klieve, D. Ouwerkerk, M. A. Sundset, and Y. Kamagata. 2003. Ecology of uncultivated Oscillospira species in the rumen of cattle, sheep, and reindeer as assessed by microscopy and molecular approaches. Appl. Environ. Microbiol. 69:6808–6815. doi:10.1128/AEM.69.11.6808-6815.2003
    • (2003) Appl. Environ. Microbiol , vol.69 , pp. 6808-6815
    • Mackie, R.I.1    Aminov, R.I.2    Hu, W.P.3    Klieve, A.V.4    Ouwerkerk, D.5    Sundset, M.A.6    Kamagata, Y.7
  • 27
    • 2942625911 scopus 로고    scopus 로고
    • Interactions between commensal intestinal bacteria and the immune system
    • Macpherson, A. J., and N. L. Harris. 2004. Interactions between commensal intestinal bacteria and the immune system. Nat. Rev. Immunol. 4:478–485. doi:10.1038/nri1373
    • (2004) Nat. Rev. Immunol , vol.4 , pp. 478-485
    • Macpherson, A.J.1    Harris, N.L.2
  • 28
    • 0034802944 scopus 로고    scopus 로고
    • IgA responses in the intestinal mucosa against pathogenic and non-pathogenic microorganisms
    • Macpherson, A. J., L. Hunziker, K. McCoy, and A. Lamarre. 2001. IgA responses in the intestinal mucosa against pathogenic and non-pathogenic microorganisms. Microbes Infect. 3:1021–1035. doi:10.1016/S1286-4579(01)01460-5
    • (2001) Microbes Infect , vol.3 , pp. 1021-1035
    • Macpherson, A.J.1    Hunziker, L.2    McCoy, K.3    Lamarre, A.4
  • 29
    • 84862815821 scopus 로고    scopus 로고
    • Regional and age dependent changes in gene expression of Tolllike receptors and key antimicrobial defence molecules throughout the gastrointestinal tract of dairy calves
    • Malmuthuge, N., M. J. Li, P. Fries, P. J. Griebel, and L. L. Guan. 2012. Regional and age dependent changes in gene expression of Tolllike receptors and key antimicrobial defence molecules throughout the gastrointestinal tract of dairy calves. Vet. Immunol. Immunopathol. 146:18–26. doi:10.1016/j.vetimm.2012.01.010
    • (2012) Vet. Immunol. Immunopathol , vol.146 , pp. 18-26
    • Malmuthuge, N.1    Li, M.J.2    Fries, P.3    Griebel, P.J.4    Guan, L.L.5
  • 30
    • 84875588848 scopus 로고    scopus 로고
    • Grain-rich diets differently alter ruminal and colonic abundance of microbial populations and lipopolysaccharide in goats
    • Metzler-Zebeli, B. U., S. Schmitz-Esser, F. Klevenhusen, L. Podstatzky-Lichtenstein, M. Wagner, and Q. Zebeli. 2013. Grain-rich diets differently alter ruminal and colonic abundance of microbial populations and lipopolysaccharide in goats. Anaerobe 20:65–73. doi:10.1016/j.anaerobe.2013.02.005
    • (2013) Anaerobe , vol.20 , pp. 65-73
    • Metzler-Zebeli, B.U.1    Schmitz-Esser, S.2    Klevenhusen, F.3    Podstatzky-Lichtenstein, L.4    Wagner, M.5    Zebeli, Q.6
  • 31
    • 84921786777 scopus 로고    scopus 로고
    • Regional specialization within the intestinal immune system
    • Mowat, A. M., and W. W. Agace. 2014. Regional specialization within the intestinal immune system. Nat. Rev. Immunol. 14:667–685. doi:10.1038/nri3738
    • (2014) Nat. Rev. Immunol , vol.14 , pp. 667-685
    • Mowat, A.M.1    Agace, W.W.2
  • 32
    • 84874211596 scopus 로고    scopus 로고
    • Intestinal antimicrobial peptides during homeostasis, infection, and disease
    • Muniz, L. R., C. Knosp, and G. Yeretssian. 2012. Intestinal antimicrobial peptides during homeostasis, infection, and disease. Front. Immunol. 3:310. doi:10.3389/fimmu.2012.00310
    • (2012) Front. Immunol , vol.3 , pp. 310
    • Muniz, L.R.1    Knosp, C.2    Yeretssian, G.3
  • 33
    • 84896739700 scopus 로고    scopus 로고
    • Characterization of the core rumen microbiome in cattle during transition from forage to concentrate as well as during and after an acidotic challenge
    • Petri, R. M., T. Schwaiger, G. B. Penner, K. A. Beauchemin, R. J. Forster, J. J. McKinnon, and T. A. McAllister. 2013. Characterization of the core rumen microbiome in cattle during transition from forage to concentrate as well as during and after an acidotic challenge. PLoS One 8:E83424. doi:10.1371/journal. pone.0083424
    • (2013) Plos One , vol.8
    • Petri, R.M.1    Schwaiger, T.2    Penner, G.B.3    Beauchemin, K.A.4    Forster, R.J.5    McKinnon, J.J.6    McAllister, T.A.7
  • 34
    • 1542376906 scopus 로고    scopus 로고
    • Weaning is associated with an upregulation of expression of inflammatory cytokines in the intestine of piglets
    • Pie, S., J. P. Lalles, F. Blazy, J. Laffitte, B. Seve, and I. P. Oswald. 2004. Weaning is associated with an upregulation of expression of inflammatory cytokines in the intestine of piglets. J. Nutr. 134:641–647.
    • (2004) J. Nutr , vol.134 , pp. 641-647
    • Pie, S.1    Lalles, J.P.2    Blazy, F.3    Laffitte, J.4    Seve, B.5    Oswald, I.P.6
  • 35
    • 84890317386 scopus 로고    scopus 로고
    • Bacterial diversity associated with feeding dry forage at different dietary concentrations in the rumen contents of Mehshana buffalo (Bubalus bubalis) using 16S pyrotags
    • Pitta, D. W., S. Kumar, B. Veiccharelli, N. Parmar, B. Reddy, and C. G. Joshi. 2014. Bacterial diversity associated with feeding dry forage at different dietary concentrations in the rumen contents of Mehshana buffalo (Bubalus bubalis) using 16S pyrotags. Anaerobe 25:31–41. doi:10.1016/j.anaerobe.2013.11.008
    • (2014) Anaerobe , vol.25 , pp. 31-41
    • Pitta, D.W.1    Kumar, S.2    Veiccharelli, B.3    Parmar, N.4    Reddy, B.5    Joshi, C.G.6
  • 36
    • 42149151606 scopus 로고    scopus 로고
    • Effect of Aloe vera whole leaf extract on short chain fatty acids production by Bacteroides fragilis, Bifidobacterium infantis and Eubacterium limosum
    • Pogribna, M., J. P. Freeman, D. Paine, and M. D. Boudreau. 2008. Effect of Aloe vera whole leaf extract on short chain fatty acids production by Bacteroides fragilis, Bifidobacterium infantis and Eubacterium limosum. Lett. Appl. Microbiol. 46:575–580. doi:10.1111/j.1472-765X.2008.02346.x
    • (2008) Lett. Appl. Microbiol , vol.46 , pp. 575-580
    • Pogribna, M.1    Freeman, J.P.2    Paine, D.3    Boudreau, M.D.4
  • 37
    • 67649327176 scopus 로고    scopus 로고
    • FastTree: Computing large minimum evolution trees with profiles instead of a distance matrix
    • Price, M. N., P. S. Dehal, and A. P. Arkin. 2009. FastTree: Computing large minimum evolution trees with profiles instead of a distance matrix. Mol. Biol. Evol. 26:1641–1650. doi:10.1093/molbev/msp077
    • (2009) Mol. Biol. Evol , vol.26 , pp. 1641-1650
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 40
    • 84858768479 scopus 로고    scopus 로고
    • New insights into the impact of the intestinal microbiota on health and disease: A symposium report
    • Thomas, L. V., and T. Ockhuizen. 2012. New insights into the impact of the intestinal microbiota on health and disease: A symposium report. Br. J. Nutr. 107(Suppl. 1):S1–S13. doi:10.1017/S0007114511006970
    • (2012) Br. J. Nutr , vol.107 , pp. SS1-S13
    • Thomas, L.V.1    Ockhuizen, T.2
  • 41
    • 77951238012 scopus 로고    scopus 로고
    • Beneficial effects of Bacteroides fragilis polysaccharides on the immune system. Front
    • Troy, E. B., and D. L. Kasper. 2010. Beneficial effects of Bacteroides fragilis polysaccharides on the immune system. Front. Biosci. 15:25–34. doi:10.2741/3603
    • (2010) Biosci , vol.15 , pp. 25-34
    • Troy, E.B.1    Kasper, D.L.2
  • 42
    • 84877136407 scopus 로고    scopus 로고
    • Regulation of intestinal homeostasis and immunity with probiotic lactobacilli
    • van Baarlen, P., J. M. Wells, and M. Kleerebezem. 2013. Regulation of intestinal homeostasis and immunity with probiotic lactobacilli. Trends Immunol. 34:208–215. doi:10.1016/j.it.2013.01.005
    • (2013) Trends Immunol , vol.34 , pp. 208-215
    • Van Baarlen, P.1    Wells, J.M.2    Kleerebezem, M.3
  • 43
    • 84888425488 scopus 로고    scopus 로고
    • Linking microbial community structure, interactions and function in anaerobic digesters using new molecular techniques
    • Vanwonterghem, I., P. D. Jensen, D. P. Ho, D. J. Batstone, and G. W. Tyson. 2014. Linking microbial community structure, interactions and function in anaerobic digesters using new molecular techniques. Curr. Opin. Biotechnol. 27:55–64. doi:10.1016/j. copbio.2013.11.004
    • (2014) Curr. Opin. Biotechnol , vol.27 , pp. 55-64
    • Vanwonterghem, I.1    Jensen, P.D.2    Ho, D.P.3    Batstone, D.J.4    Tyson, G.W.5
  • 44
    • 50049098340 scopus 로고    scopus 로고
    • Ecological role of lactobacilli in the gastrointestinal tract: Implications for fundamental and biomedical research
    • Walter, J. 2008. Ecological role of lactobacilli in the gastrointestinal tract: Implications for fundamental and biomedical research. Appl. Environ. Microbiol. 74:4985–4996. doi:10.1128/AEM.00753-08
    • (2008) Appl. Environ. Microbiol , vol.74 , pp. 4985-4996
    • Walter, J.1
  • 45
    • 0042335166 scopus 로고
    • The post-natal growth of the visceral organs of the lamb I. The growth of the visceral organs of the grazing lamb from birth to sixteen weeks of age
    • Wardrop, I., and J. Coombe. 1960. The post-natal growth of the visceral organs of the lamb I. The growth of the visceral organs of the grazing lamb from birth to sixteen weeks of age. J. Agric. Sci. 54:140–143. doi:10.1017/S0021859600021523
    • (1960) J. Agric. Sci , vol.54 , pp. 140-143
    • Wardrop, I.1    Coombe, J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.