메뉴 건너뛰기




Volumn 534, Issue 7608, 2016, Pages 500-505

Author Correction: Defining the consequences of genetic variation on a proteome-wide scale (Nature, (2016), 534, 7608, (500-505), 10.1038/nature18270);Defining the consequences of genetic variation on a proteome-wide scale

Author keywords

[No Author keywords available]

Indexed keywords

CHAPERONIN CONTAINING TCP1; PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR; PROTEOME; MESSENGER RNA; TRANSCRIPTOME;

EID: 84975717746     PISSN: 00280836     EISSN: 14764687     Source Type: Journal    
DOI: 10.1038/s41586-022-04920-w     Document Type: Erratum
Times cited : (285)

References (58)
  • 1
    • 0014937223 scopus 로고
    • Central dogma of molecular biology
    • Crick, F. Central dogma of molecular biology. Nature 227, 561-563 (1970).
    • (1970) Nature , vol.227 , pp. 561-563
    • Crick, F.1
  • 2
    • 0033016717 scopus 로고    scopus 로고
    • Correlation between protein and mRNA abundance in yeast
    • Gygi, S. P., Rochon, Y., Franza, B. R. & Aebersold, R. Correlation between protein and mRNA abundance in yeast. Mol. Cell. Biol. 19, 1720-1730 (1999).
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 1720-1730
    • Gygi, S.P.1    Rochon, Y.2    Franza, B.R.3    Aebersold, R.4
  • 3
    • 79956322553 scopus 로고    scopus 로고
    • Global quantification of mammalian gene expression control
    • Schwanhäusser, B. et al. Global quantification of mammalian gene expression control. Nature 473, 337-342 (2011).
    • (2011) Nature , vol.473 , pp. 337-342
    • Schwanhäusser, B.1
  • 4
    • 79959812980 scopus 로고    scopus 로고
    • Comparative analysis of proteome and transcriptome variation in mouse
    • Ghazalpour, A. et al. Comparative analysis of proteome and transcriptome variation in mouse. PLoS Genet. 7, e1001393 (2011).
    • (2011) PLoS Genet. , vol.7 , pp. e1001393
    • Ghazalpour, A.1
  • 5
    • 84883698933 scopus 로고    scopus 로고
    • Integrative phenomics reveals insight into the structure of phenotypic diversity in budding yeast
    • Skelly, D. A. et al. Integrative phenomics reveals insight into the structure of phenotypic diversity in budding yeast. Genome Res. 23, 1496-1504 (2013).
    • (2013) Genome Res. , vol.23 , pp. 1496-1504
    • Skelly, D.A.1
  • 6
    • 84904036456 scopus 로고    scopus 로고
    • Deep proteomics of the xenopus laevis egg using an mRNAderived reference database
    • Wühr, M. et al. Deep proteomics of the Xenopus laevis egg using an mRNAderived reference database. Curr. Biol. 24, 1467-1475 (2014).
    • (2014) Curr. Biol. , vol.24 , pp. 1467-1475
    • Wühr, M.1
  • 7
    • 59149100506 scopus 로고    scopus 로고
    • System-wide molecular evidence for phenotypic buffering in arabidopsis
    • Fu, J. et al. System-wide molecular evidence for phenotypic buffering in Arabidopsis. Nat. Genet. 41, 166-167 (2009).
    • (2009) Nat. Genet. , vol.41 , pp. 166-167
    • Fu, J.1
  • 8
    • 33750204290 scopus 로고    scopus 로고
    • Genetics of global gene expression
    • Rockman, M. V. & Kruglyak, L. Genetics of global gene expression. Nat. Rev. Genet. 7, 862-872 (2006).
    • (2006) Nat. Rev. Genet. , vol.7 , pp. 862-872
    • Rockman, M.V.1    Kruglyak, L.2
  • 9
    • 0037177625 scopus 로고    scopus 로고
    • Genetic dissection of transcriptional regulation in budding yeast
    • Brem, R. B., Yvert, G., Clinton, R. & Kruglyak, L. Genetic dissection of transcriptional regulation in budding yeast. Science 296, 752-755 (2002).
    • (2002) Science , vol.296 , pp. 752-755
    • Brem, R.B.1    Yvert, G.2    Clinton, R.3    Kruglyak, L.4
  • 10
    • 4043128071 scopus 로고    scopus 로고
    • Genetic analysis of genome-wide variation in human gene expression
    • Morley, M. et al. Genetic analysis of genome-wide variation in human gene expression. Nature 430, 743-747 (2004).
    • (2004) Nature , vol.430 , pp. 743-747
    • Morley, M.1
  • 11
    • 0037456823 scopus 로고    scopus 로고
    • Genetics of gene expression surveyed in maize, mouse and man
    • Schadt, E. E. et al. Genetics of gene expression surveyed in maize, mouse and man. Nature 422, 297-302 (2003).
    • (2003) Nature , vol.422 , pp. 297-302
    • Schadt, E.E.1
  • 12
    • 0035400051 scopus 로고    scopus 로고
    • Genetical genomics: The added value from segregation
    • Jansen, R. C. & Nap, J. P. Genetical genomics: the added value from segregation. Trends Genet. 17, 388-391 (2001).
    • (2001) Trends Genet. , vol.17 , pp. 388-391
    • Jansen, R.C.1    Nap, J.P.2
  • 13
    • 20144386111 scopus 로고    scopus 로고
    • Complex trait analysis of gene expression uncovers polygenic and pleiotropic networks that modulate nervous system function
    • Chesler, E. J. et al. Complex trait analysis of gene expression uncovers polygenic and pleiotropic networks that modulate nervous system function. Nat. Genet. 37, 233-242 (2005).
    • (2005) Nat. Genet. , vol.37 , pp. 233-242
    • Chesler, E.J.1
  • 14
    • 80053337795 scopus 로고    scopus 로고
    • Genetic variation shapes protein networks mainly through non-transcriptional mechanisms
    • Foss, E. J. et al. Genetic variation shapes protein networks mainly through non-transcriptional mechanisms. PLoS Biol. 9, e1001144 (2011).
    • (2011) PLoS Biol. , vol.9 , pp. e1001144
    • Foss, E.J.1
  • 15
    • 35648969195 scopus 로고    scopus 로고
    • Genetic basis of proteome variation in yeast
    • Foss, E. J. et al. Genetic basis of proteome variation in yeast. Nat. Genet. 39, 1369-1375 (2007).
    • (2007) Nat. Genet. , vol.39 , pp. 1369-1375
    • Foss, E.J.1
  • 17
    • 84908077262 scopus 로고    scopus 로고
    • Multilayered genetic and omics dissection of mitochondrial activity in a mouse reference population
    • Wu, Y. et al. Multilayered genetic and omics dissection of mitochondrial activity in a mouse reference population. Cell 158, 1415-1430 (2014).
    • (2014) Cell , vol.158 , pp. 1415-1430
    • Wu, Y.1
  • 18
    • 84879879014 scopus 로고    scopus 로고
    • Variation and genetic control of protein abundance in humans
    • Wu, L. et al. Variation and genetic control of protein abundance in humans. Nature 499, 79-82 (2013).
    • (2013) Nature , vol.499 , pp. 79-82
    • Wu, L.1
  • 19
    • 0028285005 scopus 로고
    • Quantitative trait loci underlying gene product variation: A novel perspective for analyzing regulation of genome expression
    • Damerval, C., Maurice, A., Josse, J. M. & de Vienne, D. Quantitative trait loci underlying gene product variation: a novel perspective for analyzing regulation of genome expression. Genetics 137, 289-301 (1994).
    • (1994) Genetics , vol.137 , pp. 289-301
    • Damerval, C.1    Maurice, A.2    Josse, J.M.3    De Vienne, D.4
  • 20
    • 84896724814 scopus 로고    scopus 로고
    • Genetics of single-cell protein abundance variation in large yeast populations
    • Albert, F. W., Treusch, S., Shockley, A. H., Bloom, J. S. & Kruglyak, L. Genetics of single-cell protein abundance variation in large yeast populations. Nature 506, 494-497 (2014).
    • (2014) Nature , vol.506 , pp. 494-497
    • Albert, F.W.1    Treusch, S.2    Shockley, A.H.3    Bloom, J.S.4    Kruglyak, L.5
  • 21
    • 80155124832 scopus 로고    scopus 로고
    • MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics
    • Ting, L., Rad, R., Gygi, S. P. & Haas, W. MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics. Nat. Methods 8, 937-940 (2011).
    • (2011) Nat. Methods , vol.8 , pp. 937-940
    • Ting, L.1    Rad, R.2    Gygi, S.P.3    Haas, W.4
  • 22
    • 84904325891 scopus 로고    scopus 로고
    • MultiNotch MS3 enables accurate, sensitive, and multiplexed detection of differential expression across cancer cell line proteomes
    • McAlister, G. C. et al. MultiNotch MS3 enables accurate, sensitive, and multiplexed detection of differential expression across cancer cell line proteomes. Anal. Chem. 86, 7150-7158 (2014).
    • (2014) Anal. Chem. , vol.86 , pp. 7150-7158
    • McAlister, G.C.1
  • 23
    • 14644441018 scopus 로고    scopus 로고
    • The collaborative cross, a community resource for the genetic analysis of complex traits
    • Churchill, G. A. et al. The Collaborative Cross, a community resource for the genetic analysis of complex traits. Nat. Genet. 36, 1133-1137 (2004).
    • (2004) Nat. Genet. , vol.36 , pp. 1133-1137
    • Churchill, G.A.1
  • 25
    • 84857433366 scopus 로고    scopus 로고
    • Ten years of the collaborative cross
    • Threadgill, D. W. & Churchill, G. A. Ten years of the collaborative cross. Genetics 190, 291-294 (2012).
    • (2012) Genetics , vol.190 , pp. 291-294
    • Threadgill, D.W.1    Churchill, G.A.2
  • 26
    • 80052851950 scopus 로고    scopus 로고
    • Mouse genomic variation and its effect on phenotypes and gene regulation
    • Keane, T. M. et al. Mouse genomic variation and its effect on phenotypes and gene regulation. Nature 477, 289-294 (2011).
    • (2011) Nature , vol.477 , pp. 289-294
    • Keane, T.M.1
  • 27
    • 84907911617 scopus 로고    scopus 로고
    • Quantitative trait locus mapping methods for diversity outbred mice
    • Gatti, D. M. et al. Quantitative trait locus mapping methods for diversity outbred mice. G3 (Bethesda) 4, 1623-1633 (2014).
    • (2014) G3 (Bethesda) , vol.4 , pp. 1623-1633
    • Gatti, D.M.1
  • 28
    • 20944448234 scopus 로고    scopus 로고
    • A genetic and physiological study of impaired glucose homeostasis control in C57BL/6J mice
    • Toye, A. A. et al. A genetic and physiological study of impaired glucose homeostasis control in C57BL/6J mice. Diabetologia 48, 675-686 (2005).
    • (2005) Diabetologia , vol.48 , pp. 675-686
    • Toye, A.A.1
  • 29
    • 84879825604 scopus 로고    scopus 로고
    • A spontaneous mutation in the nicotinamide nucleotide transhydrogenase gene of C57BL/6J mice results in mitochondrial redox abnormalities
    • Ronchi, J. A. et al. A spontaneous mutation in the nicotinamide nucleotide transhydrogenase gene of C57BL/6J mice results in mitochondrial redox abnormalities. Free Radic. Biol. Med. 63, 446-456 (2013).
    • (2013) Free Radic. Biol. Med. , vol.63 , pp. 446-456
    • Ronchi, J.A.1
  • 30
    • 33747032052 scopus 로고    scopus 로고
    • Deletion of nicotinamide nucleotide transhydrogenase: A new quantitive trait locus accounting for glucose intolerance in C57BL/6J mice
    • Freeman, H. C., Hugill, A., Dear, N. T., Ashcroft, F. M. & Cox, R. D. Deletion of nicotinamide nucleotide transhydrogenase: a new quantitive trait locus accounting for glucose intolerance in C57BL/6J mice. Diabetes 55, 2153-2156 (2006).
    • (2006) Diabetes , vol.55 , pp. 2153-2156
    • Freeman, H.C.1    Hugill, A.2    Dear, N.T.3    Ashcroft, F.M.4    Cox, R.D.5
  • 31
    • 84937213168 scopus 로고    scopus 로고
    • The BioPlex network: A systematic exploration of the human interactome
    • Huttlin, E. L. et al. The BioPlex Network: a systematic exploration of the human interactome. Cell 162, 425-440 (2015).
    • (2015) Cell , vol.162 , pp. 425-440
    • Huttlin, E.L.1
  • 32
    • 84870541192 scopus 로고    scopus 로고
    • Molecular basis for SNX-BAR-mediated assembly of distinct endosomal sorting tubules
    • van Weering, J. R. T. et al. Molecular basis for SNX-BAR-mediated assembly of distinct endosomal sorting tubules. EMBO J. 31, 4466-4480 (2012).
    • (2012) EMBO J. , vol.31 , pp. 4466-4480
    • Van Weering, J.R.T.1
  • 33
    • 0032478691 scopus 로고    scopus 로고
    • Identification of the binding partners for flightless I, A novel protein bridging the leucine-rich repeat and the gelsolin superfamilies
    • Liu, Y.-T. & Yin, H. L. Identification of the binding partners for flightless I, A novel protein bridging the leucine-rich repeat and the gelsolin superfamilies. J. Biol. Chem. 273, 7920-7927 (1998).
    • (1998) J. Biol. Chem. , vol.273 , pp. 7920-7927
    • Liu, Y.-T.1    Yin, H.L.2
  • 34
    • 78650466243 scopus 로고    scopus 로고
    • A tissue-specific atlas of mouse protein phosphorylation and expression
    • Huttlin, E. L. et al. A tissue-specific atlas of mouse protein phosphorylation and expression. Cell 143, 1174-1189 (2010).
    • (2010) Cell , vol.143 , pp. 1174-1189
    • Huttlin, E.L.1
  • 35
    • 84922469439 scopus 로고    scopus 로고
    • Genomic varation. Impact of regulatory variation from RNA to protein
    • Battle, A. et al. Genomic varation. Impact of regulatory variation from RNA to protein. Science 347, 664-667 (2013).
    • (2013) Science , vol.347 , pp. 664-667
    • Battle, A.1
  • 36
    • 78649642467 scopus 로고    scopus 로고
    • Protein abundances are more conserved than mRNA abundances across diverse taxa
    • Laurent, J. M. et al. Protein abundances are more conserved than mRNA abundances across diverse taxa. Proteomics 10, 4209-4212 (2010).
    • (2010) Proteomics , vol.10 , pp. 4209-4212
    • Laurent, J.M.1
  • 37
    • 84858439862 scopus 로고    scopus 로고
    • Insights into the regulation of protein abundance from proteomic and transcriptomic analyses
    • Vogel, C. & Marcotte, E. M. Insights into the regulation of protein abundance from proteomic and transcriptomic analyses. Nat. Rev. Genet. 13, 227-232 (2012).
    • (2012) Nat. Rev. Genet. , vol.13 , pp. 227-232
    • Vogel, C.1    Marcotte, E.M.2
  • 38
    • 84867333071 scopus 로고    scopus 로고
    • Status and access to the collaborative cross population
    • Welsh, C. E. et al. Status and access to the Collaborative Cross population. Mamm. Genome 23, 706-712 (2012).
    • (2012) Mamm. Genome , vol.23 , pp. 706-712
    • Welsh, C.E.1
  • 39
    • 52549103273 scopus 로고    scopus 로고
    • The collaborative cross at oak ridge national laboratory: Developing a powerful resource for systems genetics
    • Chesler, E. J. et al. The Collaborative Cross at Oak Ridge National Laboratory: developing a powerful resource for systems genetics. Mamm. Genome 19, 382-389 (2008).
    • (2008) Mamm. Genome , vol.19 , pp. 382-389
    • Chesler, E.J.1
  • 40
    • 52549130734 scopus 로고    scopus 로고
    • The collaborative cross, developing a resource for mammalian systems genetics: A status report of the wellcome trust cohort
    • Iraqi, F. A., Churchill, G. & Mott, R. The Collaborative Cross, developing a resource for mammalian systems genetics: a status report of the Wellcome Trust cohort. Mamm. Genome 19, 379-381 (2008).
    • (2008) Mamm. Genome , vol.19 , pp. 379-381
    • Iraqi, F.A.1    Churchill, G.2    Mott, R.3
  • 41
    • 0000857494 scopus 로고
    • An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
    • Eng, J. K., McCormack, A. L. & Yates, J. R. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J. Am. Soc. Mass Spectrom. 5, 976-989 (1994).
    • (1994) J. Am. Soc. Mass Spectrom , vol.5 , pp. 976-989
    • Eng, J.K.1    McCormack, A.L.2    Yates, J.R.3
  • 42
    • 33847630405 scopus 로고    scopus 로고
    • Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
    • Elias, J. E. & Gygi, S. P. Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nat. Methods 4, 207-214 (2007).
    • (2007) Nat. Methods , vol.4 , pp. 207-214
    • Elias, J.E.1    Gygi, S.P.2
  • 44
    • 84863149726 scopus 로고    scopus 로고
    • Accelerating the inbreeding of multi-parental recombinant inbred lines generated by sibling matings
    • Welsh, C. E. & McMillan, L. Accelerating the inbreeding of multi-parental recombinant inbred lines generated by sibling matings. G3 (Bethesda) 2, 191-198 (2012).
    • (2012) G3 (Bethesda) , vol.2 , pp. 191-198
    • Welsh, C.E.1    McMillan, L.2
  • 45
    • 84857388664 scopus 로고    scopus 로고
    • Haplotype probabilities in advanced intercross populations
    • Broman, K. W. et al. Haplotype probabilities in advanced intercross populations. G3 (Bethesda) 2, 199-202 (2012).
    • (2012) G3 (Bethesda) , vol.2 , pp. 199-202
    • Broman, K.W.1
  • 46
    • 84908008732 scopus 로고    scopus 로고
    • RNA-seq alignment to individualized genomes improves transcript abundance estimates in multiparent populations
    • Munger, S. C. et al. RNA-Seq alignment to individualized genomes improves transcript abundance estimates in multiparent populations. Genetics 198, 59-73 (2014).
    • (2014) Genetics , vol.198 , pp. 59-73
    • Munger, S.C.1
  • 47
    • 79960693332 scopus 로고    scopus 로고
    • QTLRel: An R package for genome-wide association studies in which relatedness is a concern
    • Cheng, R., Abney, M., Palmer, A. A. & Skol, A. D. QTLRel: an R package for genome-wide association studies in which relatedness is a concern. BMC Genet. 12, 66 (2011).
    • (2011) BMC Genet. , vol.12 , pp. 66
    • Cheng, R.1    Abney, M.2    Palmer, A.A.3    Skol, A.D.4
  • 48
    • 4143076901 scopus 로고    scopus 로고
    • Efficient computation of significance levels for multiple associations in large studies of correlated data, including genomewide association studies
    • Dudbridge, F. & Koeleman, B. P. C. Efficient computation of significance levels for multiple associations in large studies of correlated data, including genomewide association studies. Am. J. Hum. Genet. 75, 424-435 (2004).
    • (2004) Am. J. Hum. Genet. , vol.75 , pp. 424-435
    • Dudbridge, F.1    Koeleman, B.P.C.2
  • 49
    • 1142273091 scopus 로고    scopus 로고
    • Strong control, conservative point estimation and simultaneous conservative consistency of false discovery rates: A unified approach
    • Storey, J. D., Taylor, J. E. & Siegmund, D. Strong control, conservative point estimation and simultaneous conservative consistency of false discovery rates: A unified approach. J. R. Stat. Soc. Series B 66, 187-205 (2004).
    • (2004) J. R. Stat. Soc. Series B , vol.66 , pp. 187-205
    • Storey, J.D.1    Taylor, J.E.2    Siegmund, D.3
  • 50
    • 0023020183 scopus 로고
    • The moderator-mediator variable distinction in social psychological research: Conceptual, strategic, and statistical considerations
    • Baron, R. M. & Kenny, D. A. The moderator-mediator variable distinction in social psychological research: conceptual, strategic, and statistical considerations. J. Pers. Soc. Psychol. 51, 1173-1182 (1986).
    • (1986) J. Pers. Soc. Psychol. , vol.51 , pp. 1173-1182
    • Baron, R.M.1    Kenny, D.A.2
  • 51
    • 33847179367 scopus 로고    scopus 로고
    • Required sample size to detect the mediated effect
    • Fritz, M. S. & Mackinnon, D. P. Required sample size to detect the mediated effect. Psychol. Sci. 18, 233-239 (2007).
    • (2007) Psychol. Sci. , vol.18 , pp. 233-239
    • Fritz, M.S.1    Mackinnon, D.P.2
  • 52
    • 0042856391 scopus 로고    scopus 로고
    • Trans-acting regulatory variation in saccharomyces cerevisiae and the role of transcription factors
    • Yvert, G. et al. Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factors. Nat. Genet. 35, 57-64 (2003).
    • (2003) Nat. Genet. , vol.35 , pp. 57-64
    • Yvert, G.1
  • 53
    • 84884592445 scopus 로고    scopus 로고
    • Genic intolerance to functional variation and the interpretation of personal genomes
    • Petrovski, S., Wang, Q., Heinzen, E. L., Allen, A. S. & Goldstein, D. B. Genic intolerance to functional variation and the interpretation of personal genomes. PLoS Genet. 9, e1003709 (2013).
    • (2013) PLoS Genet. , vol.9 , pp. e1003709
    • Petrovski, S.1    Wang, Q.2    Heinzen, E.L.3    Allen, A.S.4    Goldstein, D.B.5
  • 54
    • 0036529479 scopus 로고    scopus 로고
    • An efficient algorithm for large-scale detection of protein families
    • Enright, A. J., Van Dongen, S. & Ouzounis, C. A. An efficient algorithm for large-scale detection of protein families. Nucleic Acids Res. 30, 1575-1584 (2002).
    • (2002) Nucleic Acids Res. , vol.30 , pp. 1575-1584
    • Enright, A.J.1    Van Dongen, S.2    Ouzounis, C.A.3
  • 55
    • 84891782659 scopus 로고    scopus 로고
    • Pfam: The protein families database
    • Finn, R. D. et al. Pfam: the protein families database. Nucleic Acids Res. 42, D222-D230 (2014).
    • (2014) Nucleic Acids Res. , vol.42 , pp. D222-D230
    • Finn, R.D.1
  • 56
    • 79960976768 scopus 로고    scopus 로고
    • UniProt knowledgebase: A hub of integrated protein data
    • Magrane, M. & UniProt Consortium. UniProt Knowledgebase: a hub of integrated protein data. Database (Oxford) 2011, bar009 (2011).
    • (2011) Database (Oxford) , vol.2011 , pp. bar009
    • Magrane, M.1
  • 57
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: Tool for the unification of biology
    • Ashburner, M. et al. Gene ontology: tool for the unification of biology. Nat. Genet. 25, 25-29 (2000).
    • (2000) Nat. Genet. , vol.25 , pp. 25-29
    • Ashburner, M.1
  • 58
    • 84975703837 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing on JSTOR
    • Benjamini, Y. & Hochberg, Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing on JSTOR. J. R. Stat. Soc. B 57, 289-300 (1995).
    • (1995) J. R. Stat. Soc. B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.