Translational control by 5′-untranslated regions of eukaryotic mRNAs

Science

Volumn 352, Issue 6292, 2016, Pages 1413-1416

  Hinnebusch, Alan G ^a   Ivanov, Ivaylo P ^a   Sonenberg, Nahum ^b  

^a EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH AND HUMAN DEVELOPMENT   (United States)

^b MCGILL UNIVERSITY   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

GUANINE NUCLEOTIDE EXCHANGE FACTOR; INITIATION FACTOR 2; INITIATION FACTOR 2ALPHA; INITIATION FACTOR 4F; MESSENGER RNA; PHOSPHOPROTEIN PHOSPHATASE 1; PROTEOME; 5' UNTRANSLATED REGION; START CODON;

DISEASE TREATMENT; EUKARYOTE; GENETIC ANALYSIS; LEARNING; MEMORY; PROTEOMICS; RNA;

5' UNTRANSLATED REGION; ENDOPLASMIC RETICULUM STRESS; EUKARYOTE; INTERNAL RIBOSOME ENTRY SITE; NONHUMAN; OPEN READING FRAME; PRIORITY JOURNAL; PROTEIN PHOSPHORYLATION; REVIEW; RIBOSOME; RNA STRUCTURE; START CODON; TRANSLATION INITIATION; ANIMAL; DEGENERATIVE DISEASE; GENETICS; HUMAN; MEMORY; METABOLISM; NEOPLASM; PHYSIOLOGY; REGULATORY SEQUENCE; RNA TRANSLATION;

EUKARYOTA;

5' UNTRANSLATED REGIONS; ANIMALS; CODON, INITIATOR; EUKARYOTIC INITIATION FACTOR-2; HUMANS; MEMORY; NEOPLASMS; NEURODEGENERATIVE DISEASES; OPEN READING FRAMES; PEPTIDE CHAIN INITIATION, TRANSLATIONAL; REGULATORY ELEMENTS, TRANSCRIPTIONAL; RIBOSOMES;

EID: 84975072542     PISSN: 00368075     EISSN: 10959203     Source Type: Journal    
DOI: 10.1126/science.aad9868     Document Type: Review

References (60)

1. A. G. Hinnebusch, Microbiol. Mol. Biol. Rev. 75, 434-467 (2011).
2. M. Kozak, Cell 44, 283-292 (1986).
3. S. R. Starck et al., Science 336, 1719-1723 (2012).
4. G. Loughran, M. S. Sachs, J. F. Atkins, I. P. Ivanov, Nucleic Acids Res. 40, 2898-2906 (2012).
5. I. P. Ivanov, G. Loughran, M. S. Sachs, J. F. Atkins, Proc. Natl. Acad. Sci. U.S.A. 107, 18056-18060 (2010).
6. T. F. Donahue, A. M. Cigan, E. K. Pabich, B. Castilho Valavicius, Cell 54, 621-632 (1988).
7. K. Berthelot, M. Muldoon, L. Rajkowitsch, J. Hughes, J. E. McCarthy, Mol. Microbiol. 51, 987-1001 (2004).
8. T. V. Pestova, V. G. Kolupaeva, Genes Dev. 16, 2906-2922 (2002).
9. J. A. Arribere, W. V. Gilbert, Genome Res. 23, 977-987 (2013).
10. S. A. Sedman, G. W. Gelembiuk, J. E. Mertz, J. Virol. 64, 453-457 (1990).
11. H. Sinvani et al., Cell Metab. 21, 479-492 (2015).
12. M. Kozak, Proc. Natl. Acad. Sci. U.S.A. 87, 8301-8305 (1990).
13. A. E. Koromilas, A. Lazaris-Karatzas, N. Sonenberg, EMBO J. 11, 4153-4158 (1992).
14. I. S. Abaeva, A. Marintchev, V. P. Pisareva, C. U. Hellen, T. V. Pestova, EMBO J. 30, 115-129 (2011).
15. N. D. Sen, F. Zhou, N. T. Ingolia, A. G. Hinnebusch, Genome Res. 25, 1196-1205 (2015).
16. C. A. Rubio et al., Genome Biol. 15, 476 (2014).
17. A. L. Wolfe et al., Nature 513, 65-70 (2014).
18. Y. V. Svitkin et al., RNA 7, 382-394 (2001).
19. J. Pelletier, N. Sonenberg, Mol. Cell. Biol. 5, 3222-3230 (1985).
20. R. Soto-Rifo et al., EMBO J. 31, 3745-3756 (2012).
21. M. W. Hentze, F. Gebauer, T. Preiss, in Translational Control in Biology and Medicine, M. B. Mathews, N. Sonenberg, J. W. B. Hershey, Eds. (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 2007), pp. 269-295.
22. N. T. Ingolia, S. Ghaemmaghami, J. R. Newman, J. S. Weissman, Science 324, 218-223 (2009).
23. S. Lee et al., Proc. Natl. Acad. Sci. U.S.A. 109, E2424-E2432 (2012).
24. T. G. Johnstone, A. A. Bazzini, A. J. Giraldez, EMBO J. 35, 706-723 (2016).
25. B. Vanderperre et al., PLOS ONE 8, e70698 (2013).
26. F. Zhang, A. G. Hinnebusch, Nucleic Acids Res. 39, 3128-3140 (2011).
27. M. V. Gerashchenko, V. N. Gladyshev, Nucleic Acids Res. 42, e134 (2014).
28. S. E. Calvo, D. J. Pagliarini, V. K. Mootha, Proc. Natl. Acad. Sci. U.S.A. 106, 7507-7512 (2009).
29. G. A. Brar et al., Science 335, 552-557 (2012).
30. A. Gaba, A. Jacobson, M. S. Sachs, Mol. Cell 20, 449-460 (2005).
31. M. Werner, A. Feller, F. Messenguy, A. Piérard, Cell 49, 805-813 (1987).
32. J. Wei, C. Wu, M. S. Sachs, Mol. Cell. Biol. 32, 2396-2406 (2012).
33. A. Raney, G. L. Law, G. J. Mize, D. R. Morris, J. Biol. Chem. 277, 5988-5994 (2002).
34. I. P. Ivanov, J. F. Atkins, A. J. Michael, Nucleic Acids Res. 38, 353-359 (2010).
35. D. E. Andreev et al., eLife 4, e03971 (2015).
36. S. K. Young, J. A. Willy, C. Wu, M. S. Sachs, R. C. Wek, J. Biol. Chem. 290, 28257-28271 (2015).
37. A. G. Hinnebusch, Annu. Rev. Microbiol. 59, 407-450 (2005).
38. P. D. Lu, H. P. Harding, D. Ron, J. Cell Biol. 167, 27-33 (2004).
39. K. M. Vattem, R. C. Wek, Proc. Natl. Acad. Sci. U.S.A. 101, 11269-11274 (2004).
40. B. Szamecz et al., Genes Dev. 22, 2414-2425 (2008).
41. C. Luttermann, G. Meyers, Genes Dev. 23, 331-344 (2009).
42. A. Zinoviev, C. U. Hellen, T. V. Pestova, Mol. Cell 57, 1059-1073 (2015).
43. S. A. Chappell, J. Dresios, G. M. Edelman, V. P. Mauro, Proc. Natl. Acad. Sci. U.S.A. 103, 9488-9493 (2006).
44. S. Weingarten-Gabbay et al., Science 351, 4939 (2016).
45. H. S. Park, A. Himmelbach, K. S. Browning, T. Hohn, L. A. Ryabova, Cell 106, 723-733 (2001).
46. B. Roy et al., RNA 16, 748-761 (2010).
47. S. Schleich et al., Nature 512, 208-212 (2014).
48. M. Costa-Mattioli et al., Nature 436, 1166-1173 (2005).
49. K. Wethmar et al., Genes Dev. 24, 15-20 (2010).
50. J. Medenbach, M. Seiler, M. W. Hentze, Cell 145, 902-913 (2011).
51. J. Somers et al., Genes Dev. 29, 1891-1896 (2015).
52. J. Tcherkezian et al., Genes Dev. 28, 357-371 (2014).
53. V. Gandin et al., Genome Res. 26, 636-648 (2016).
54. K. D. Meyer et al., Cell 163, 999-1010 (2015).
55. N. E. Shirokikh, A. S. Spirin, Proc. Natl. Acad. Sci. U.S.A. 105, 10738-10743 (2008).
56. S. C. Agalarov, P. A. Sakharov, D. Kh. Fattakhova, E. A. Sogorin, A. S. Spirin, Sci. Rep. 4, 4438 (2014).
57. M. A. Algire et al., RNA 8, 382-397 (2002).
58. W. V. Gilbert, K. Zhou, T. K. Butler, J. A. Doudna, Science 317, 1224-1227 (2007).
59. J. S. Kieft, Trends Biochem. Sci. 33, 274-283 (2008).
60. R. J. Jackson, Cold Spring Harb. Perspect. Biol. 5, a011569 (2013).