Development of high-speed AFM and its biological applications

Atomic Force Microscopy in Nanobiology

Volumn , Issue , 2014, Pages 143-176

  Uchihashi, Takayuki ^a   Kodera, Noriyuki ^a   Ando, Toshio ^a  

^a KANAZAWA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL APPLICATIONS; HIGH-SPEED AFM;

EID: 84974731304     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.4032/9789814411592     Document Type: Chapter

References (54)

1. Binnig, G., Quate, C. F., and Gerber, C. (1986). Phys. Rev. Lett., 56, 930-933.
2. Ando, T., Kodera, N., Takai, E., Maruyama, D., Saito, K., and Toda, A. (2001). Proc. Natl. Acad. Sci. U. S. A., 98, 12468-12472.
3. Ando, T., Kodera, N., Maruyama, D., Takai, E., Saito, K., and Toda, A. (2002). Jpn. J. Appl. Phys., 41, 4851-4856.
4. Ando, T., Uchihashi, T., and Fukuma, T. (2008). Prog. Surf. Sci., 83, 337-437.
5. Yamamoto, D., Uchihashi, T., Kodera, N., Yamashita, H., Nishikori, S., Ogura, T., Shibata, M., and Ando, T. (2010). Methods Enzymol., 475, 541-564.
6. Zhomg, Q., Iniss, D., Kjoller, K., and Elings, V. (1993). Surf. Sci., 290, L688-L692.
7. Kodera, N., Sakashita, M., and Ando, T. (2006). Rev. Sci. Instrum., 77, 083704.
8. Kitazawa, M., Shiotani, K., and Toda, A. (2003). Jpn. J. Appl. Phys., 42, 4844-4847.
9. Wendel, M., Lorenz, H., and Kotthaus, J. P. (1995). Appl. Phys. Lett., 67, 3732.
10. Alexander, S., Hellemans, L., Marti, O., Schneir, J., Elings, V., Hansma, P. K., Longmire, M., and Gurley, J. (1989). J. Appl. Phys., 65, 164-167.
11. Hansma, P. K. (1996). J. Appl. Phys., 80, 3622.
12. Kassies, R., van der Werf, K. O., Bennink, M. L., and Otto, C. (2004). Rev. Sci. Instrum., 75, 689.
13. Kokavecz, J., Tóth, Z., Horváth, Z. L., Heszler, P., and Mechler, A. (2006). Nanotechnology, 17, S173-S177.
14. Ando, T., Kodera, N., Uchihashi, T., Miyagi, A., Nakakita, R., Yamashita, H., and Matada, K. (2005). e-J. Surf. Sci. Nanotechnol., 3, 384-392.
15. Kindt, J. H., Fantner, G. E., Cutroni, J. a and Hansma, P. K. (2004). Ultramicroscopy, 100, 259-265.
16. Fukuma, T., Okazaki, Y., Kodera, N., Uchihashi, T., and Ando, T. (2008). Appl. Phys. Lett., 92, 243119.
17. Kodera, N., Yamashita, H., and Ando, T. (2005). Rev. Sci. Instrum., 76, 053708.
18. Rodriguez, T. R., and Garcia, R. (2003). Appl. Phys. Lett., 82, 4821.
19. Schiener, J., Witt, S., Stark, M., and Guckenberger, R. (2004). Rev. Sci. Instrum., 75, 2564.
20. Yamamoto, D., Nagura, N., Omote, S., Taniguchi, M., and Ando, T. (2009). Biophys. J., 97, 2358-2367.
21. Green, N. M. (1990). Methods Enzymol., 184, 51-67.
22. Reviakine, I., and Brisson, A. (2001). Langmuir, 17, 8293-8299.
23. Darst, S. A., Ahlers, M., Meller, P. H., Kubalek, E.W., Blankenburg, R., Ribi, H. O., Ringsdorf, H., and Kornberg, R. D. (1991). Biophys. J., 59, 387-396.
24. Heyes, C. D., Kobitski, A. Y., Amirgoulova, E. V., and Nienhaus, G. U. (2004). J. Phys. Chem. B, 108, 13387-13394.
25. Gast, A. P., Robertson, C. R.,Wang, S.W., and Yatcilla,M. T. (1999). Biomol. Eng., 16, 21-27.
26. Ratanabanangkoon, P., and Gast, A. P. (2002). Langmuir, 19, 1794-1801.
27. Yamamoto, D., Uchihashi, T., Kodera, N., and Ando, T. (2008). Nanotechnology, 19, 384009.
28. Sellers, J. R. (2008). Myosins: A Superfamily of Molecular Motors, Proteins and Cell Regulation, ed. Coluccio, L. M. (Springer, the Netherlands), 289-324.
29. Mehta, A. D., Rock, R. S., Rief, M., Spudich, J. A., Mooseker, M. S., and Cheney, R. E. (1999). Nature, 400, 59-593.
30. Rief, M., Rock, R. S., Mehta, A. D., Mooseker, M. S., Cheney, R. E., and Spudich, J. A. (2000). Proc. Natl Acad. Sci. U. S. A., 97, 9482-9486.
31. Sakamoto, T., Amitani, I., Yokota, E., and Ando, T. (2000). Biochem. Biophys. Res. Commun., 272, 586-590.
32. Forkey, J. N., Quinlan, M. E., Shaw, M. A., Corrie, J. E. T., and Goldman, Y. E. (2003). Nature, 422, 399-404.
33. Sakamoto, T., Webb, M. R., Forgacs, E., White, H. D., and Sellers, J. R. (2008). Nature, 455, 128-132.
34. Walker, M. L., Burgess, S. A., Sellers, J. R.,Wang, F., Hammer, J. A., Trinick, J., and Knight, P. J. (2000). Nature, 405, 804-807.
35. Burgess, S., Walker, M., Wang, F., Sellers, J. R., White, H. D., Knight, P. J., and Trinick, J. (2002). J. Cell Biol., 159, 983-991.
36. Oke, O. A., Burgess, S. A., Forgacs, E., Knight, P. J., Sakamoto, T., Sellers, J. R., White, H., and Trinick, J. (2010). Proc. Natl. Acad. Sci. U. S. A., 107, 2509-2514.
37. Kodera, N., Yamamoto, D., Ishikawa, R., and Ando, T. (2010). Nature, 468, 72-76.
38. Huxley, H. E. (1969). Science, 164, 1356-1366.
39. De La Cruz, E. M.,Wells, A. L., Rosenfeld, S. S., Ostap, E. M., and Sweeney, H. L. (1999). Proc. Natl. Acad. Sci. U. S. A., 96, 13726-13731.
40. Sellers, J. R., and Veigel, C. (2010). Nat. Struct. Mol. Biol., 17, 59-595.
41. Lanyi, J. K. (2004). Annu. Rev. Physiol., 66, 665-688.
42. Haupts, U., Tittor, J., and Oesterhelt, D. (1999). Annu. Rev. Biophys. Biomol. Struct., 28, 367-399.
43. Kimura, Y., Vassylyev, D. G., Miyazawa, A., Kidera, A., Matsushima, M., Mitsuoka, K., Murata, K., Hirai, T., and Fujiyoshi, Y. (1997). Nature, 389, 206-211.
44. Oesterhelt, D., and Stoeckenius,W. (1971). Nat. New Biol., 233, 149-152.
45. Sass, H. J., Büldt, G., Gessenich, R., Hehn, D., Neff, D., Schlesinger, R., Berendzen, J., and Ormos, P. (2000). Nature, 406, 649-653.
46. Subramaniam, S., and Henderson, R. (2000). Nature, 406, 653-657.
47. Vonck, J. (2000). EMBO J., 19, 2152-2160.
48. Thorgeirsson, T. E., Xiao,W., Brown, L. S., Needleman, R., Lanyi, J. K., and Shin, Y. K. (1997). J. Mol. Biol., 273, 951-957.
49. Brown, L. S., Needleman, R., and Lanyi, J. K. (2002). J. Mol. Biol., 317, 471-478.
50. Otto, H., Marti, T., Holz, M., Mogi, T., Lindau, M., Khorana, H. G., and Heyn, M. P. (1989). Proc. Natl. Acad. Sci. U. S. A., 86, 9228-9232.
51. Shibata,M., Yamashita, H., Uchihashi, T., Kandori, H., and Ando, T. (2010). Nat. Nanotechnol., 5, 208-212.
52. Engel, A., and Müller, D. J. (2000). Nat. Struct. Biol., 7, 715-718.
53. Druckmann, S., Friedman, N., Lanyi, J. K., Needleman, R., Ottolenghi, M., and Sheves, M. (1992). Photochem. Photobiol., 56, 1041-1047.
54. Shibata,M., Uchihashi, T., Yamashita, H., Kandori, H., and Ando, T. (2011). Angew. Chem., Int. Ed., 50, 441-4413.