-
1
-
-
0242643743
-
A Bayesian missing value estimation method for gene expression profile data
-
Oba S, Sato MA, Takemasa I, Monden M, Matsubara K, Ishii S: A Bayesian missing value estimation method for gene expression profile data. Bioinformatics. 2003, 19 (16): 2088-2096. 10.1093/bioinformatics/btg287.
-
(2003)
Bioinformatics
, vol.19
, Issue.16
, pp. 2088-2096
-
-
Oba, S.1
Sato, M.A.2
Takemasa, I.3
Monden, M.4
Matsubara, K.5
Ishii, S.6
-
2
-
-
13444304426
-
Missing value estimation for dna microarray gene expression data: local least squares imputation
-
Kim H, Golub GH, Park H: Missing value estimation for dna microarray gene expression data: local least squares imputation. Bioinformatics. 2005, 21 (2): 187-198. 10.1093/bioinformatics/bth499.
-
(2005)
Bioinformatics
, vol.21
, Issue.2
, pp. 187-198
-
-
Kim, H.1
Golub, G.H.2
Park, H.3
-
3
-
-
0003074296
-
Support vector machines
-
Hearst MA, Dumais ST, Osman E, Platt J, Scholkopf B: Support vector machines. IEEE. 1998, 13 (4): 18-28.
-
(1998)
IEEE
, vol.13
, Issue.4
, pp. 18-28
-
-
Hearst, M.A.1
Dumais, S.T.2
Osman, E.3
Platt, J.4
Scholkopf, B.5
-
4
-
-
0027333692
-
Principal components analysis (PCA)
-
Máckiewicz A, Ratajczak W: Principal components analysis (PCA). Computers & Geosciences. 1993, 19 (3): 303-342. 10.1016/0098-3004(93)90090-R.
-
(1993)
Computers & Geosciences
, vol.19
, Issue.3
, pp. 303-342
-
-
Máckiewicz, A.1
Ratajczak, W.2
-
5
-
-
0034730140
-
Singular value decomposition for genome-wide expression data processing and modeling
-
Alter O, Brown PO, Botstein D: Singular value decomposition for genome-wide expression data processing and modeling. Proceedings of the National Academy of Sciences. 2000, 97 (18): 10101-10106. 10.1073/pnas.97.18.10101.
-
(2000)
Proceedings of the National Academy of Sciences
, vol.97
, Issue.18
, pp. 10101-10106
-
-
Alter, O.1
Brown, P.O.2
Botstein, D.3
-
6
-
-
15844413351
-
A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis
-
Statnikov A, Aliferis CF, Tsamardinos I, Hardin D, Levy S: A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis. Bioinformatics. 2005, 21 (5): 631-643. 10.1093/bioinformatics/bti033.
-
(2005)
Bioinformatics
, vol.21
, Issue.5
, pp. 631-643
-
-
Statnikov, A.1
Aliferis, C.F.2
Tsamardinos, I.3
Hardin, D.4
Levy, S.5
-
7
-
-
77249129377
-
Comparative analysis of missing value imputation methods to improve clustering and interpretation of microarray experiments
-
Celton M, Malpertuy A, Lelandais G, De Brevern AG: Comparative analysis of missing value imputation methods to improve clustering and interpretation of microarray experiments. BMC Genomics. 2010, 11 (1): 15-10.1186/1471-2164-11-15.
-
(2010)
BMC Genomics
, vol.11
, Issue.1
, pp. 15
-
-
Celton, M.1
Malpertuy, A.2
Lelandais, G.3
De Brevern, A.G.4
-
8
-
-
33751358957
-
Effects of replacing the unreliable cDNA microarray measurements on the disease classification based on gene expression profiles and functional modules
-
Wang D, Lv Y, Guo Z, Li X, Li Y, Zhu J, et al: Effects of replacing the unreliable cDNA microarray measurements on the disease classification based on gene expression profiles and functional modules. Bioinformatics. 2006, 22 (23): 2883-2889. 10.1093/bioinformatics/btl339.
-
(2006)
Bioinformatics
, vol.22
, Issue.23
, pp. 2883-2889
-
-
Wang, D.1
Lv, Y.2
Guo, Z.3
Li, X.4
Li, Y.5
Zhu, J.6
-
9
-
-
0034598746
-
Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
-
Allzadeh A, Elsen M, Davis R, Chi M, Lossos I, Rosenwald A, et al: Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling. Nature. 2000, 403 (6769): 503-511. 10.1038/35000501.
-
(2000)
Nature
, vol.403
, Issue.6769
, pp. 503-511
-
-
Allzadeh, A.1
Elsen, M.2
Davis, R.3
Chi, M.4
Lossos, I.5
Rosenwald, A.6
-
10
-
-
77249112451
-
Gene expression clustering: Dealing with the missing values.
-
Edited by: Klopotek, M.A. 2005, Springer, Gdansk, Poland
-
Gruzdž A, Ihnatowicz A, Ślkezak D: Gene expression clustering: Dealing with the missing values. Intelligent Information Processing and Web Mining. Edited by: Klopotek, M.A. 2005, Springer, Gdansk, Poland, 521-530.
-
Intelligent Information Processing and Web Mining.
, pp. 521-530
-
-
Gruzdž, A.1
Ihnatowicz, A.2
Ślkezak, D.3
-
11
-
-
84900840331
-
A bicluster-based bayesian principal component analysis method for microarray missing value estimation
-
Meng F, Cai C, Yan H: A bicluster-based bayesian principal component analysis method for microarray missing value estimation. Biomedical and Health Informatics, IEEE Journal. 2014, 18 (3): 863-871.
-
(2014)
Biomedical and Health Informatics, IEEE Journal
, vol.18
, Issue.3
, pp. 863-871
-
-
Meng, F.1
Cai, C.2
Yan, H.3
-
12
-
-
80053185923
-
Missing value imputation for gene expression data: computational techniques to recover missing data from available information
-
Liew AWC, Law NF, Yan H: Missing value imputation for gene expression data: computational techniques to recover missing data from available information. Briefings in Bioinformatics. 2011, 12 (5): 498-513. 10.1093/bib/bbq080.
-
(2011)
Briefings in Bioinformatics
, vol.12
, Issue.5
, pp. 498-513
-
-
Liew, A.W.C.1
Law, N.F.2
Yan, H.3
-
13
-
-
0036004157
-
Comparison of methods for image analysis on cDNA microarray data
-
Yang YH, Buckley MJ, Dudoit S, Speed TP: Comparison of methods for image analysis on cDNA microarray data. Journal of Computational and Graphical Statistics. 2002, 11 (1): 108-136. 10.1198/106186002317375640.
-
(2002)
Journal of Computational and Graphical Statistics
, vol.11
, Issue.1
, pp. 108-136
-
-
Yang, Y.H.1
Buckley, M.J.2
Dudoit, S.3
Speed, T.P.4
-
14
-
-
0034960264
-
Missing value estimation methods for DNA microarrays
-
Troyanskaya O, Cantor M, Sherlock G, Brown P, Hastie T, Tibshirani R, et al: Missing value estimation methods for DNA microarrays. Bioinformatics. 2001, 17 (6): 520-525. 10.1093/bioinformatics/17.6.520.
-
(2001)
Bioinformatics
, vol.17
, Issue.6
, pp. 520-525
-
-
Troyanskaya, O.1
Cantor, M.2
Sherlock, G.3
Brown, P.4
Hastie, T.5
Tibshirani, R.6
-
16
-
-
53049097990
-
Sequential local least squares imputation estimating missing value of microarray data
-
Zhang X, Song X, Wang H, Zhang H: Sequential local least squares imputation estimating missing value of microarray data. Computers in Biology and Medicine. 2008, 38 (10): 1112-1120. 10.1016/j.compbiomed.2008.08.006.
-
(2008)
Computers in Biology and Medicine
, vol.38
, Issue.10
, pp. 1112-1120
-
-
Zhang, X.1
Song, X.2
Wang, H.3
Zhang, H.4
-
17
-
-
77953156609
-
A weighted local least squares imputation method for missing value estimation in microarray gene expression data
-
Ching WK, Li L, Tsing NK, Tai CW, Ng TW, Wong A, Cheng KW: A weighted local least squares imputation method for missing value estimation in microarray gene expression data. International Journal of Data Mining and Bioinformatics. 2010, 4 (3): 331-347. 10.1504/IJDMB.2010.033524.
-
(2010)
International Journal of Data Mining and Bioinformatics
, vol.4
, Issue.3
, pp. 331-347
-
-
Ching, W.K.1
Li, L.2
Tsing, N.K.3
Tai, C.W.4
Ng, T.W.5
Wong, A.6
Cheng, K.W.7
-
18
-
-
27944450456
-
DNA microarray data imputation and significance analysis of differential expression
-
Jörnsten R, Wang HY, Welsh WJ, Ouyang M: DNA microarray data imputation and significance analysis of differential expression. Bioinformatics. 2005, 21 (22): 4155-4161. 10.1093/bioinformatics/bti638.
-
(2005)
Bioinformatics
, vol.21
, Issue.22
, pp. 4155-4161
-
-
Jörnsten, R.1
Wang, H.Y.2
Welsh, W.J.3
Ouyang, M.4
-
19
-
-
79955522081
-
Towards better accuracy for missing value estimation of epistatic miniarray profiling data by a novel ensemble approach
-
Pan XY, Tian Y, Huang Y, Shen HB: Towards better accuracy for missing value estimation of epistatic miniarray profiling data by a novel ensemble approach. Genomics. 2011, 97 (5): 257-264. 10.1016/j.ygeno.2011.03.001.
-
(2011)
Genomics
, vol.97
, Issue.5
, pp. 257-264
-
-
Pan, X.Y.1
Tian, Y.2
Huang, Y.3
Shen, H.B.4
-
20
-
-
58049171175
-
Estimating missing value in microarray data using fuzzy clustering and gene ontology.
-
BIBM'08. IEEE International Conference. 2008, IEEE
-
Mohammadi A, Saraee MH: Estimating missing value in microarray data using fuzzy clustering and gene ontology. Bioinformatics and Biomedicine, 2008. BIBM'08. IEEE International Conference. 2008, IEEE, 382-385.
-
(2008)
Bioinformatics and Biomedicine
, pp. 382-385
-
-
Mohammadi, A.1
Saraee, M.H.2
-
21
-
-
33645468884
-
Microarray missing data imputation based on a set theoretic framework and biological knowledge
-
Gan X, Liew AWC, Yan H: Microarray missing data imputation based on a set theoretic framework and biological knowledge. Nucleic Acids Research. 2006, 34 (5): 1608-1619. 10.1093/nar/gkl047.
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.5
, pp. 1608-1619
-
-
Gan, X.1
Liew, A.W.C.2
Yan, H.3
-
22
-
-
83255175012
-
A bicluster-based missing value imputation method for gene expression data
-
Ji R, Liu D, Zhou Z: A bicluster-based missing value imputation method for gene expression data. Journal of Computational Information Systems. 2011, 7 (13): 4810-4818.
-
(2011)
Journal of Computational Information Systems
, vol.7
, Issue.13
, pp. 4810-4818
-
-
Ji, R.1
Liu, D.2
Zhou, Z.3
-
23
-
-
83655163701
-
Iterative bicluster-based least square framework for estimation of missing values in microarray gene expression data
-
Cheng KO, Law NF, Siu WC: Iterative bicluster-based least square framework for estimation of missing values in microarray gene expression data. Pattern Recognition. 2012, 45 (4): 1281-1289. 10.1016/j.patcog.2011.10.012.
-
(2012)
Pattern Recognition
, vol.45
, Issue.4
, pp. 1281-1289
-
-
Cheng, K.O.1
Law, N.F.2
Siu, W.C.3
-
28
-
-
39749093807
-
Which missing value imputation method to use in expression profiles: a comparative study and two selection schemes
-
Brock GN, Shaffer JR, Blakesley RE, Lotz MJ, Tseng GC: Which missing value imputation method to use in expression profiles: a comparative study and two selection schemes. BMC Bioinformatics. 2008, 9 (1): 12-10.1186/1471-2105-9-12.
-
(2008)
BMC Bioinformatics
, vol.9
, Issue.1
, pp. 12
-
-
Brock, G.N.1
Shaffer, J.R.2
Blakesley, R.E.3
Lotz, M.J.4
Tseng, G.C.5
-
29
-
-
0031742022
-
Comprehensive identification of cell cycle-regulated genes of the yeast saccharomyces cerevisiae by microarray hybridization
-
Spellman PT, Sherlock G, Zhang MQ, Iyer VR, Anders K, Eisen MB, et al: Comprehensive identification of cell cycle-regulated genes of the yeast saccharomyces cerevisiae by microarray hybridization. Molecular Biology of the Cell. 1998, 9 (12): 3273-3297. 10.1091/mbc.9.12.3273.
-
(1998)
Molecular Biology of the Cell
, vol.9
, Issue.12
, pp. 3273-3297
-
-
Spellman, P.T.1
Sherlock, G.2
Zhang, M.Q.3
Iyer, V.R.4
Anders, K.5
Eisen, M.B.6
-
31
-
-
0034812459
-
Construction of preferential cdna microarray specialized for human colorectal carcinoma: molecular sketch of colorectal cancer
-
Takemasa I, Higuchi H, Yamamoto H, Sekimoto M, Tomita N, Nakamori S, et al: Construction of preferential cdna microarray specialized for human colorectal carcinoma: molecular sketch of colorectal cancer. Biochemical and Biophysical Research Communications. 2001, 285 (5): 1244-1249. 10.1006/bbrc.2001.5277.
-
(2001)
Biochemical and Biophysical Research Communications
, vol.285
, Issue.5
, pp. 1244-1249
-
-
Takemasa, I.1
Higuchi, H.2
Yamamoto, H.3
Sekimoto, M.4
Tomita, N.5
Nakamori, S.6
|