메뉴 건너뛰기




Volumn 2, Issue , 2015, Pages 161-179

Matters of Size: Genetic Bottlenecks in Virus Infection and Their Potential Impact on Evolution

Author keywords

Genetic random drift; Genetic variability; Horizontal transmission; Independent action hypothesis; Vertical transmission; Virus evolution

Indexed keywords

CELL LEVEL; DOSE RESPONSE; GENETIC DRIFT; GENETIC VARIABILITY; HUMAN; MOLECULAR EVOLUTION; PRIMARY INFECTION; PRIORITY JOURNAL; REVIEW; VERTICAL TRANSMISSION; VIRION; VIRUS INFECTION; VIRUS TRANSMISSION; ANIMAL; CLASSIFICATION; EVOLUTION; GENETICS; GENOME SIZE; ISOLATION AND PURIFICATION; VIRAL PHENOMENA AND FUNCTIONS; VIROLOGY; VIRUS;

EID: 84969264802     PISSN: 2327056X     EISSN: 23270578     Source Type: Journal    
DOI: 10.1146/annurev-virology-100114-055135     Document Type: Review
Times cited : (116)

References (89)
  • 1
    • 12144286761 scopus 로고    scopus 로고
    • Molecular evolution of the SARS coronavirus during the course of the SARS epidemic in China
    • Chin. SARS Mol. Epidemiol. Consort. 2004. Molecular evolution of the SARS coronavirus during the course of the SARS epidemic in China. Science 303:1666-69
    • (2004) Science , vol.303 , pp. 1666-1669
    • Chin. SARS Mol. Epidemiol. Consort1
  • 2
    • 84907193791 scopus 로고    scopus 로고
    • Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak
    • Gire SK, Goba A, Andersen KG, Sealfon RSG, Park DJ, et al. 2014. Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak. Science 345:1369-72
    • (2014) Science , vol.345 , pp. 1369-1372
    • Gire, S.K.1    Goba, A.2    Andersen, K.G.3    Sealfon, R.S.G.4    Park, D.J.5
  • 4
    • 37749019678 scopus 로고    scopus 로고
    • Virus evolution: Insights from an experimental approach
    • Elena SF, Sanjúan R. 2007. Virus evolution: insights from an experimental approach. Annu. Rev. Ecol. Evol. Syst. 38:27-52
    • (2007) Annu. Rev. Ecol. Evol. Syst. , vol.38 , pp. 27-52
    • Elena, S.F.1    Sanjúan, R.2
  • 5
    • 66749097890 scopus 로고    scopus 로고
    • An experimental test of the independent action hypothesis in virus-insect pathosystems
    • Zwart MP, Hemerik L, Cory JS, de Visser JAGM, Bianchi FJ, et al. 2009. An experimental test of the independent action hypothesis in virus-insect pathosystems. Proc. R. Soc. B 276:2233-42
    • (2009) Proc. R. Soc. B , vol.276 , pp. 2233-2242
    • Zwart, M.P.1    Hemerik, L.2    Cory, J.S.3    De Visser, J.A.G.M.4    Bianchi, F.J.5
  • 6
    • 84857972280 scopus 로고    scopus 로고
    • Visual tracking of plant virus infection and movement using a reporterMYB transcription factor that activates anthocyanin biosynthesis
    • Bedoya LC, Martínez F, OrźaezD,Daròs JA. 2012. Visual tracking of plant virus infection and movement using a reporterMYB transcription factor that activates anthocyanin biosynthesis. Plant Physiol. 158:1130-38
    • (2012) Plant Physiol. , vol.158 , pp. 1130-1138
    • Bedoya, L.C.1    Martínez, F.2    Orźaez, D.3    Daròs, J.A.4
  • 7
    • 79960959730 scopus 로고
    • The use of numbers of infections for comparing the concentration of plant virus suspensions. I. Dilution experiments with purified suspensions
    • Bald J. 1937. The use of numbers of infections for comparing the concentration of plant virus suspensions. I. Dilution experiments with purified suspensions. Ann. Appl. Biol. 24:33-55
    • (1937) Ann. Appl. Biol. , vol.24 , pp. 33-55
    • Bald, J.1
  • 8
    • 0024075841 scopus 로고
    • In vivo isolation of baculovirus genotypes
    • Smith IR, Crook NE. 1988. In vivo isolation of baculovirus genotypes. Virology 166:240-44
    • (1988) Virology , vol.166 , pp. 240-244
    • Smith, I.R.1    Crook, N.E.2
  • 9
    • 0034581623 scopus 로고    scopus 로고
    • The Beta Poisson dose-response model is not a single-hit model
    • Teunis PFM, Havelaar AH. 2000. The Beta Poisson dose-response model is not a single-hit model. Risk Anal. 20:513-20
    • (2000) Risk Anal. , vol.20 , pp. 513-520
    • Teunis, P.F.M.1    Havelaar, A.H.2
  • 10
    • 0035836375 scopus 로고    scopus 로고
    • Three distinct mechanisms facilitate genetic isolation of sympatric wheat streak mosaic virus lineages
    • Hall JS, French R, Hein GL, Morris TJ, Stenger DC. 2001. Three distinct mechanisms facilitate genetic isolation of sympatric wheat streak mosaic virus lineages. Virology 282:230-36
    • (2001) Virology , vol.282 , pp. 230-236
    • Hall, J.S.1    French, R.2    Hein, G.L.3    Morris, T.J.4    Stenger, D.C.5
  • 11
    • 0141458956 scopus 로고    scopus 로고
    • Estimation of population bottlenecks during systemic movement of Tobacco mosaic virus in tobacco plants
    • Sacristán S, Malpica JM, Fraile A, García-Arenal F. 2003. Estimation of population bottlenecks during systemic movement of Tobacco mosaic virus in tobacco plants. J. Virol. 77:9906-11
    • (2003) J. Virol. , vol.77 , pp. 9906-9911
    • Sacristán, S.1    Malpica, J.M.2    Fraile, A.3    García-Arenal, F.4
  • 12
    • 4544331687 scopus 로고    scopus 로고
    • Genetic bottlenecks reduce population variation in an experimental RNA virus population
    • Li H, RoossinckMJ. 2004. Genetic bottlenecks reduce population variation in an experimental RNA virus population. J. Virol. 78:10582-87
    • (2004) J. Virol. , vol.78 , pp. 10582-10587
    • Li, H.1    Roossinck, M.J.2
  • 13
    • 77954537969 scopus 로고    scopus 로고
    • Genetic bottlenecks during systemic movement of Cucumber mosaic virus vary in different host plants
    • Ali A, Roossinck MJ. 2010. Genetic bottlenecks during systemic movement of Cucumber mosaic virus vary in different host plants. Virology 404:279-83
    • (2010) Virology , vol.404 , pp. 279-283
    • Ali, A.1    Roossinck, M.J.2
  • 15
    • 38949093857 scopus 로고    scopus 로고
    • Venezuelan equine encephalitis virus in the mosquito vector Aedes taeniorhynchus: Infection initiated by a small number of susceptible epithelial cells and a population bottleneck
    • Smith DR, Adams AP, Kenney JL, Wang E, Weaver SC. 2008. Venezuelan equine encephalitis virus in the mosquito vector Aedes taeniorhynchus: infection initiated by a small number of susceptible epithelial cells and a population bottleneck. Virology 372:176-86
    • (2008) Virology , vol.372 , pp. 176-186
    • Smith, D.R.1    Adams, A.P.2    Kenney, J.L.3    Wang, E.4    Weaver, S.C.5
  • 16
    • 79960939505 scopus 로고    scopus 로고
    • One is enough: In vivo effective population size is dose-dependent for a plant RNA virus
    • Zwart MP, Daròs JA, Elena SF. 2011. One is enough: In vivo effective population size is dose-dependent for a plant RNA virus. PLOS Pathog. 7:e1002122
    • (2011) PLOS Pathog. , vol.7 , pp. e1002122
    • Zwart, M.P.1    Daròs, J.A.2    Elena, S.F.3
  • 17
  • 18
    • 84893815689 scopus 로고    scopus 로고
    • Narrow bottlenecks affect Pea seedborne mosaic virus populations during vertical seed transmission but not during leaf colonization
    • Fabré F, Moury B, Johansen EI, Simon V, Jacquemond M, Senoussi R. 2014. Narrow bottlenecks affect Pea seedborne mosaic virus populations during vertical seed transmission but not during leaf colonization. PLOS Pathog. 10:e1003833
    • (2014) PLOS Pathog. , vol.10 , pp. e1003833
    • Fabré, F.1    Moury, B.2    Johansen, E.I.3    Simon, V.4    Jacquemond, M.5    Senoussi, R.6
  • 19
    • 36749045200 scopus 로고    scopus 로고
    • Estimation of the number of virus particles transmitted by an insect vector
    • Moury B, Fabré F, Senoussi R. 2007. Estimation of the number of virus particles transmitted by an insect vector. PNAS 104:17891-96
    • (2007) PNAS , vol.104 , pp. 17891-17896
    • Moury, B.1    Fabré, F.2    Senoussi, R.3
  • 20
    • 0034691052 scopus 로고    scopus 로고
    • The evolution of RNA viruses: A population genetics view
    • Moya A, Elena SF, Bracho A, Miralles R, Barrio E. 2000. The evolution of RNA viruses: A population genetics view. PNAS 97:6967-73
    • (2000) PNAS , vol.97 , pp. 6967-6973
    • Moya, A.1    Elena, S.F.2    Bracho, A.3    Miralles, R.4    Barrio, E.5
  • 21
    • 33745289077 scopus 로고    scopus 로고
    • Dynamics of deletion genotypes in an experimental insect virus population
    • Simón O, Williams T, Caballero P, López-Ferber M. 2006. Dynamics of deletion genotypes in an experimental insect virus population. Proc. R. Soc. B 273:783-90
    • (2006) Proc. R. Soc. B , vol.273 , pp. 783-790
    • Simón, O.1    Williams, T.2    Caballero, P.3    López-Ferber, M.4
  • 22
    • 70450159535 scopus 로고    scopus 로고
    • Mixed infections of Pepino mosaic virus strains modulate the evolutionary dynamics of this emergent virus
    • Gómez P, Sempere RN, Elena SF, Aranda MA. 2009. Mixed infections of Pepino mosaic virus strains modulate the evolutionary dynamics of this emergent virus. J. Virol. 83:12378-87
    • (2009) J. Virol. , vol.83 , pp. 12378-12387
    • Gómez, P.1    Sempere, R.N.2    Elena, S.F.3    Aranda, M.A.4
  • 23
    • 18044386958 scopus 로고    scopus 로고
    • Recombination every day: Abundant recombination in a virus during a single multi-cellular host infection
    • Froissart R, Roze D, UzestM,GalibertL,Blanc S,Michalakis Y. 2005. Recombination every day: Abundant recombination in a virus during a single multi-cellular host infection. PLOS Biol. 3:e89
    • (2005) PLOS Biol. , vol.3 , pp. e89
    • Froissart, R.1    Roze, D.2    Uzest, M.3    Galibert, L.4    Blanc, S.5    Michalakis, Y.6
  • 24
    • 0001771498 scopus 로고
    • Evolution in Mendelian populations
    • Wright S. 1931. Evolution in Mendelian populations. Genetics 16:97-159
    • (1931) Genetics , vol.16 , pp. 97-159
    • Wright, S.1
  • 25
    • 73949145225 scopus 로고    scopus 로고
    • Infection with strains of Citrus tristeza virus does not exclude superinfection by other strains of the virus
    • Folimonova SY, Robertson CJ, Shilts T, Folimonov AS, Hilf ME, et al. 2010. Infection with strains of Citrus tristeza virus does not exclude superinfection by other strains of the virus. J. Virol. 84:1314-25
    • (2010) J. Virol. , vol.84 , pp. 1314-1325
    • Folimonova, S.Y.1    Robertson, C.J.2    Shilts, T.3    Folimonov, A.S.4    Hilf, M.E.5
  • 26
    • 84880307979 scopus 로고    scopus 로고
    • The role of virulence in in vivo superinfection fitness of the vertebrate RNA virus infectious hematopoietic necrosis virus
    • Kell AM, Wargo AR, Kurath G. 2013. The role of virulence in in vivo superinfection fitness of the vertebrate RNA virus infectious hematopoietic necrosis virus. J. Virol. 87:8145-57
    • (2013) J. Virol. , vol.87 , pp. 8145-8157
    • Kell, A.M.1    Wargo, A.R.2    Kurath, G.3
  • 27
    • 84906971689 scopus 로고    scopus 로고
    • A viral protein mediates superinfection exclusion at the whole-organism level but is not required for exclusion at the cellular level
    • Bergua M, Zwart MP, El-Mohtar C, Shilts T, Elena SF, Folimonova SY. 2014. A viral protein mediates superinfection exclusion at the whole-organism level but is not required for exclusion at the cellular level. J. Virol. 88:11327-38
    • (2014) J. Virol. , vol.88 , pp. 11327-11338
    • Bergua, M.1    Zwart, M.P.2    El-Mohtar, C.3    Shilts, T.4    Elena, S.F.5    Folimonova, S.Y.6
  • 28
    • 0026448774 scopus 로고
    • Tagging of plant potyvirus replication and movement by insertion of β-glucuronidase into the viral polyprotein
    • Dolja VV, McBride HJ, Carrington JC. 1992. Tagging of plant potyvirus replication and movement by insertion of β-glucuronidase into the viral polyprotein. PNAS 89:10208-12
    • (1992) PNAS , vol.89 , pp. 10208-10212
    • Dolja, V.V.1    McBride, H.J.2    Carrington, J.C.3
  • 29
    • 0142149034 scopus 로고    scopus 로고
    • The infection rate of Daphnia magna by Pasteuria ramosa conforms with the mass-action principle
    • Regoes RR, Hottinger JW, Sygnarski L, Ebert D. 2003. The infection rate of Daphnia magna by Pasteuria ramosa conforms with the mass-action principle. Epidemiol. Infect. 131:957-66
    • (2003) Epidemiol. Infect. , vol.131 , pp. 957-966
    • Regoes, R.R.1    Hottinger, J.W.2    Sygnarski, L.3    Ebert, D.4
  • 30
    • 0343857659 scopus 로고
    • Bacterial invasion
    • Druett HA. 1952. Bacterial invasion. Nature 170:288
    • (1952) Nature , vol.170 , pp. 288
    • Druett, H.A.1
  • 31
    • 0027786493 scopus 로고
    • A generalized one-hit model for bioassays of insect viruses
    • Ridout MJ, Fenlon JS, Hughes PR. 1993. A generalized one-hit model for bioassays of insect viruses. Biometrics 49:1136-41
    • (1993) Biometrics , vol.49 , pp. 1136-1141
    • Ridout, M.J.1    Fenlon, J.S.2    Hughes, P.R.3
  • 32
    • 39149118887 scopus 로고    scopus 로고
    • A quantitative test of the relationship between parasite dose and infection probability across different host-parasite combinations
    • Ben-Ami F, Regoes RR, Ebert D. 2008. A quantitative test of the relationship between parasite dose and infection probability across different host-parasite combinations. Proc. R. Soc. B 275:853-59
    • (2008) Proc. R. Soc. B , vol.275 , pp. 853-859
    • Ben-Ami, F.1    Regoes, R.R.2    Ebert, D.3
  • 33
    • 79959839009 scopus 로고    scopus 로고
    • Heterogeneous host susceptibility enhances prevalence of mixed-genotype micro-parasite infections
    • Van der Werf W, Hemerik L, Vlak JM, Zwart MP. 2011. Heterogeneous host susceptibility enhances prevalence of mixed-genotype micro-parasite infections. PLOS Comput. Biol. 7:e1002097
    • (2011) PLOS Comput. Biol. , vol.7 , pp. e1002097
    • Van Der Werf, W.1    Hemerik, L.2    Vlak, J.M.3    Zwart, M.P.4
  • 34
    • 84869238266 scopus 로고    scopus 로고
    • Dynamics of the establishment of systemic potyvirus infection: Independent yet cumulative action of primary infection sites
    • Lafforgue G, Tromas N, Elena SF, ZwartMP. 2012. Dynamics of the establishment of systemic potyvirus infection: independent yet cumulative action of primary infection sites. J. Virol. 86:12912-22
    • (2012) J. Virol. , vol.86 , pp. 12912-12922
    • Lafforgue, G.1    Tromas, N.2    Elena, S.F.3    Zwart, M.P.4
  • 35
    • 84885997702 scopus 로고    scopus 로고
    • Effects of the number of genome segments on primary and systemic infections with a multipartite plant RNA virus
    • ͆anchez-Navarro JA, Zwart MP, Elena SF. 2013. Effects of the number of genome segments on primary and systemic infections with a multipartite plant RNA virus. J. Virol. 87:10805-15
    • (2013) J. Virol. , vol.87 , pp. 10805-10815
    • ͆anchez-Navarro, J.A.1    Zwart, M.P.2    Elena, S.F.3
  • 36
    • 0242406908 scopus 로고    scopus 로고
    • Evolution of Wheat streak mosaic virus: Dynamics of population growth within plants may explain limited variation
    • French R, Stenger DC. 2003. Evolution of Wheat streak mosaic virus: dynamics of population growth within plants may explain limited variation. Annu. Rev. Phytopathol. 41:199-214
    • (2003) Annu. Rev. Phytopathol. , vol.41 , pp. 199-214
    • French, R.1    Stenger, D.C.2
  • 37
    • 0002768404 scopus 로고
    • Some hypotheses on the aetiology of fatal infections in partially resistant hosts and their application to mice challenged with Salmonella paratyphi-b or Salmonella typhimurium by intraperitoneal injection
    • Meynell GG, Stocker BAD. 1957. Some hypotheses on the aetiology of fatal infections in partially resistant hosts and their application to mice challenged with Salmonella paratyphi-b or Salmonella typhimurium by intraperitoneal injection. J. Gen. Microbiol. 16:38-58
    • (1957) J. Gen. Microbiol. , vol.16 , pp. 38-58
    • Meynell, G.G.1    Stocker, B.A.D.2
  • 38
    • 0040851012 scopus 로고
    • Haemophilus influenzae bacteremia and meningitis resulting from survival of a single organism
    • Moxon ER, Murphy PA. 1978. Haemophilus influenzae bacteremia and meningitis resulting from survival of a single organism. PNAS 75:1534-36
    • (1978) PNAS , vol.75 , pp. 1534-1536
    • Moxon, E.R.1    Murphy, P.A.2
  • 39
    • 84890417804 scopus 로고
    • The genetical structure of populations
    • Wright S. 1951. The genetical structure of populations. Ann. Eugen. 15:323-54
    • (1951) Ann. Eugen. , vol.15 , pp. 323-354
    • Wright, S.1
  • 40
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir BS, Cockerham CC. 1984. Estimating F-statistics for the analysis of population structure. Evolution 38:1358-70
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 41
    • 55449111891 scopus 로고    scopus 로고
    • Large bottleneck size in Cauliflower mosaic virus populations during host plant colonization
    • Monsion B, Froissart R, Michalakis Y, Blanc S. 2008. Large bottleneck size in Cauliflower mosaic virus populations during host plant colonization. PLOS Pathog. 4:e1000174
    • (2008) PLOS Pathog. , vol.4 , pp. e1000174
    • Monsion, B.1    Froissart, R.2    Michalakis, Y.3    Blanc, S.4
  • 42
    • 0007162455 scopus 로고
    • Interpreting relationships between the concentrations of plant viruses and number of local lesions
    • Kleczkowski A. 1950. Interpreting relationships between the concentrations of plant viruses and number of local lesions. J. Gen. Microbiol. 4:53-69
    • (1950) J. Gen. Microbiol. , vol.4 , pp. 53-69
    • Kleczkowski, A.1
  • 43
    • 0014093486 scopus 로고
    • A mathematical model for infectivity-dilution curve of tobacco mosaic virus: Experimental tests
    • Furumoto WA, Mickey R. 1967. A mathematical model for infectivity-dilution curve of tobacco mosaic virus: experimental tests. Virology 32:224-33
    • (1967) Virology , vol.32 , pp. 224-233
    • Furumoto, W.A.1    Mickey, R.2
  • 44
    • 84919363401 scopus 로고    scopus 로고
    • Testing the independent action hypothesis of plant pathogen mode of action: A simple and powerful new approach
    • ZwartMP, Elena SF. 2015. Testing the independent action hypothesis of plant pathogen mode of action: A simple and powerful new approach. Phytopathology 105:18-25
    • (2015) Phytopathology , vol.105 , pp. 18-25
    • Zwart, M.P.1    Elena, S.F.2
  • 45
    • 75449117466 scopus 로고    scopus 로고
    • Estimation of the size of genetic bottlenecks in cell-to-cell movement of Soil-borne wheat mosaic virus and the possible role of the bottlenecks in speeding up selection of variations in trans-acting genes or elements
    • Miyashita S, Kishino H. 2010. Estimation of the size of genetic bottlenecks in cell-to-cell movement of Soil-borne wheat mosaic virus and the possible role of the bottlenecks in speeding up selection of variations in trans-acting genes or elements. J. Virol. 84:1828-37
    • (2010) J. Virol. , vol.84 , pp. 1828-1837
    • Miyashita, S.1    Kishino, H.2
  • 46
    • 77956132506 scopus 로고    scopus 로고
    • Can VNTRs be used to study genetic variation within white spot syndrome virus isolates?
    • Dieu BTM, ZwartMP, Vlak JM. 2010. Can VNTRs be used to study genetic variation within white spot syndrome virus isolates? J. Fish Dis. 33:689-93
    • (2010) J. Fish Dis. , vol.33 , pp. 689-693
    • Dieu, B.T.M.1    Zwart, M.P.2    Vlak, J.M.3
  • 47
    • 0005245059 scopus 로고
    • Two hypotheses on the aetiology response of plants to phytopathogenic bacteria
    • Ercolani GL. 1973. Two hypotheses on the aetiology response of plants to phytopathogenic bacteria. J. Gen. Microbiol. 74:83-95
    • (1973) J. Gen. Microbiol. , vol.74 , pp. 83-95
    • Ercolani, G.L.1
  • 48
    • 67650885886 scopus 로고    scopus 로고
    • The multiplicity of infection of a plant virus varies during colonization of its eukaryotic host
    • Gonźalez-Jara P, Fraile A, Cantó T, García-Arenal F. 2009. The multiplicity of infection of a plant virus varies during colonization of its eukaryotic host. J. Virol. 83:7487-94
    • (2009) J. Virol. , vol.83 , pp. 7487-7494
    • Gonźalez-Jara, P.1    Fraile, A.2    Cantó, T.3    García-Arenal, F.4
  • 50
    • 0035511877 scopus 로고    scopus 로고
    • Persistence of an occlusion-negative recombinant nucleopolyhedrovirus in Trichoplusia ni indicates high multiplicity of cellular infection
    • Bull JC, Godfray HC, O'Reilly DR. 2001. Persistence of an occlusion-negative recombinant nucleopolyhedrovirus in Trichoplusia ni indicates high multiplicity of cellular infection. Appl. Environ. Microbiol. 67:5204-9
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 5204-5209
    • Bull, J.C.1    Godfray, H.C.2    O'Reilly, D.R.3
  • 51
    • 0242668355 scopus 로고    scopus 로고
    • A few-polyhedra mutant and wild-type nucleopolyhedrovirus remain as a stable polymorphism during serial coinfection in Trichoplusia ni
    • Bull JC, Godfray HCJ, O'Reilly DR. 2003. A few-polyhedra mutant and wild-type nucleopolyhedrovirus remain as a stable polymorphism during serial coinfection in Trichoplusia ni. Appl. Environ. Microbiol. 69:2052-57
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 2052-2057
    • Bull, J.C.1    Godfray, H.C.J.2    O'Reilly, D.R.3
  • 52
    • 84878418533 scopus 로고    scopus 로고
    • Model-selection-based approach for calculating cellular multiplicity of infection during virus colonization of multi-cellular hosts
    • Zwart MP, Tromas N, Elena SF. 2013. Model-selection-based approach for calculating cellular multiplicity of infection during virus colonization of multi-cellular hosts. PLOS ONE 8:e64657
    • (2013) PLOS ONE , vol.8 , pp. e64657
    • Zwart, M.P.1    Tromas, N.2    Elena, S.F.3
  • 53
    • 77950278204 scopus 로고    scopus 로고
    • Mixed genotype transmission bodies and virions contribute to the maintenance of diversity in an insect virus
    • Clavijo G, Williams T, Munoz D, Caballero P, López-Ferber M. 2010. Mixed genotype transmission bodies and virions contribute to the maintenance of diversity in an insect virus. Proc. R. Soc. B 277:943-51
    • (2010) Proc. R. Soc. B , vol.277 , pp. 943-951
    • Clavijo, G.1    Williams, T.2    Munoz, D.3    Caballero, P.4    López-Ferber, M.5
  • 54
    • 84894072848 scopus 로고    scopus 로고
    • Within-host spatiotemporal dynamics of plant virus infection at the cellular level
    • Tromas N, ZwartMP, Lafforgue G, Elena SF. 2014. Within-host spatiotemporal dynamics of plant virus infection at the cellular level. PLOS Genet. 10:e1004186
    • (2014) PLOS Genet. , vol.10 , pp. e1004186
    • Tromas, N.1    Zwart, M.P.2    Lafforgue, G.3    Elena, S.F.4
  • 55
    • 84873804432 scopus 로고    scopus 로고
    • Author's correction: The multiplicity of infection of a plant virus varies during colonization of its eukaryotic host
    • Gonźalez-Jara P, Fraile A, Cantó T, Garcia-Arenal F. 2013. Author's correction: The multiplicity of infection of a plant virus varies during colonization of its eukaryotic host. J. Virol. 87:2374
    • (2013) J. Virol. , vol.87 , pp. 2374
    • Gonźalez-Jara, P.1    Fraile, A.2    Cantó, T.3    Garcia-Arenal, F.4
  • 56
    • 84864950131 scopus 로고    scopus 로고
    • Evolutionary dynamics of genome segmentation in multipartite viruses
    • Iranzo J, Manrubia SC. 2012. Evolutionary dynamics of genome segmentation in multipartite viruses. Proc. R. Soc. B 279:3812-19
    • (2012) Proc. R. Soc. B , vol.279 , pp. 3812-3819
    • Iranzo, J.1    Manrubia, S.C.2
  • 57
    • 33144462048 scopus 로고    scopus 로고
    • Distinct viral populations differentiate and evolve independently in a single perennial host plant
    • Jridi C, Martin JF, Marie-Jeanne V, Labonne G, Blanc S. 2006. Distinct viral populations differentiate and evolve independently in a single perennial host plant. J. Virol. 80:2349-57
    • (2006) J. Virol. , vol.80 , pp. 2349-2357
    • Jridi, C.1    Martin, J.F.2    Marie-Jeanne, V.3    Labonne, G.4    Blanc, S.5
  • 58
    • 84867396278 scopus 로고    scopus 로고
    • Circulating virus load determines the size of bottlenecks in viral populations progressing within a host
    • Gutiérrez S, Yvon M, Pirolles E, Garzo E, Fereres A, et al. 2012. Circulating virus load determines the size of bottlenecks in viral populations progressing within a host. PLOS Pathog. 8:e1003009
    • (2012) PLOS Pathog. , vol.8 , pp. e1003009
    • Gutiérrez, S.1    Yvon, M.2    Pirolles, E.3    Garzo, E.4    Fereres, A.5
  • 59
    • 84908413420 scopus 로고    scopus 로고
    • Arboviral bottlenecks and challenges to maintaining diversity and fitness during mosquito transmission
    • Forrester NL,Coffey LL, Weaver SC. 2014. Arboviral bottlenecks and challenges to maintaining diversity and fitness during mosquito transmission. Viruses 6:3991-4004
    • (2014) Viruses , vol.6 , pp. 3991-4004
    • Forrester, N.L.1    Coffey, L.L.2    Weaver, S.C.3
  • 60
    • 80052609090 scopus 로고    scopus 로고
    • West Nile virus genetic diversity is maintained during transmission by Culex pipiens quinquefasciatus mosquitoes
    • Brackney DE, Pesko KN, Brown IK, Deardorff ER, Kawatachi J, Ebel GD. 2011. West Nile virus genetic diversity is maintained during transmission by Culex pipiens quinquefasciatus mosquitoes. PLOS ONE 6:e24466
    • (2011) PLOS ONE , vol.6 , pp. e24466
    • Brackney, D.E.1    Pesko, K.N.2    Brown, I.K.3    Deardorff, E.R.4    Kawatachi, J.5    Ebel, G.D.6
  • 61
    • 46449112090 scopus 로고    scopus 로고
    • Multiple host barriers restrict poliovirus trafficking in mice
    • Kuss SK, Etheredge CA, Pfeiffer JK. 2008. Multiple host barriers restrict poliovirus trafficking in mice. PLOS Pathog. 4:e1000082
    • (2008) PLOS Pathog. , vol.4 , pp. e1000082
    • Kuss, S.K.1    Etheredge, C.A.2    Pfeiffer, J.K.3
  • 62
    • 33646129465 scopus 로고    scopus 로고
    • Mixed infection with multiple strains of murine cytomegalovirus occurs following simultaneous or sequential infection of immunocompetent mice
    • Gorman S, Harvey NL, Moro D, Lloyd ML, Voigt V, et al. 2006. Mixed infection with multiple strains of murine cytomegalovirus occurs following simultaneous or sequential infection of immunocompetent mice. J. Gen. Virol. 87:1123-32
    • (2006) J. Gen. Virol. , vol.87 , pp. 1123-1132
    • Gorman, S.1    Harvey, N.L.2    Moro, D.3    Lloyd, M.L.4    Voigt, V.5
  • 63
    • 0028144803 scopus 로고
    • Cycles, chaos, and evolution in virus cultures: A model of defective interfering particles
    • Kirkwood TB, Bangham CR. 1994. Cycles, chaos, and evolution in virus cultures: A model of defective interfering particles. PNAS 91:8685-89
    • (1994) PNAS , vol.91 , pp. 8685-8689
    • Kirkwood, T.B.1    Bangham, C.R.2
  • 65
    • 80053439798 scopus 로고    scopus 로고
    • Sequential bottlenecks drive viral evolution in early acute hepatitis C virus infection
    • Bull RA, Luciani F, McElroy K, Gaudieri S, Pham ST, et al. 2011. Sequential bottlenecks drive viral evolution in early acute hepatitis C virus infection. PLOS Pathog. 7:e1002243
    • (2011) PLOS Pathog. , vol.7 , pp. e1002243
    • Bull, R.A.1    Luciani, F.2    McElroy, K.3    Gaudieri, S.4    Pham, S.T.5
  • 66
    • 57349095446 scopus 로고    scopus 로고
    • Estimation of the effective number of founders that initiate an infection after aphid transmission of a multipartite plant virus
    • BetancourtM, Fereres A, Fraile A, Garćia-Arenal F. 2008. Estimation of the effective number of founders that initiate an infection after aphid transmission of a multipartite plant virus. J. Virol. 82:12416-21
    • (2008) J. Virol. , vol.82 , pp. 12416-12421
    • Betancourt, M.1    Fereres, A.2    Fraile, A.3    Garćia-Arenal, F.4
  • 67
    • 79955373168 scopus 로고    scopus 로고
    • Contact transmission of Tobacco mosaic virus: A quantitative analysis of parameters relevant for virus evolution
    • Sacristán S, Díaz M, Fraile A, Garćia-Arenal F. 2011. Contact transmission of Tobacco mosaic virus: A quantitative analysis of parameters relevant for virus evolution. J. Virol. 85:4974-81
    • (2011) J. Virol. , vol.85 , pp. 4974-4981
    • Sacristán, S.1    Díaz, M.2    Fraile, A.3    Garćia-Arenal, F.4
  • 68
    • 17844405607 scopus 로고    scopus 로고
    • An empirical study of the evolution of virulence under both horizontal and vertical transmission
    • Stewart AD, Logsdon JM Jr., Kelley SE. 2005. An empirical study of the evolution of virulence under both horizontal and vertical transmission. Evolution 59:730-39
    • (2005) Evolution , vol.59 , pp. 730-739
    • Stewart, A.D.1    Logsdon, J.M.2    Kelley, S.E.3
  • 69
    • 84905372005 scopus 로고    scopus 로고
    • Vertical transmission selects for reduced virulence in a plant virus and for increased resistance in the host
    • Pagán I, Montes N, Milgroom MG, Garćia-Arenal F. 2014. Vertical transmission selects for reduced virulence in a plant virus and for increased resistance in the host. PLOS Pathog. 10:e1004293
    • (2014) PLOS Pathog. , vol.10 , pp. e1004293
    • Pagán, I.1    Montes, N.2    Milgroom, M.G.3    Garćia-Arenal, F.4
  • 70
    • 0002315524 scopus 로고    scopus 로고
    • Transmission bottlenecks and the evolution of fitness in rapidly evolving RNA viruses
    • Elena SF, Sanjúan R, Bordeŕia AV, Turner PE. 2001. Transmission bottlenecks and the evolution of fitness in rapidly evolving RNA viruses. Infect. Genet. Evol. 1:41-48
    • (2001) Infect. Genet. Evol. , vol.1 , pp. 41-48
    • Elena, S.F.1    Sanjúan, R.2    Bordeŕia, A.V.3    Turner, P.E.4
  • 71
    • 79961174964 scopus 로고    scopus 로고
    • The genetic bottleneck in vertical transmission of subtype C HIV-1 is not driven by selection of especially neutralization-resistant virus from the maternal viral population
    • Russell ES, Kwiek JJ, Keys J, Barton K, Mwapasa V, et al. 2011. The genetic bottleneck in vertical transmission of subtype C HIV-1 is not driven by selection of especially neutralization-resistant virus from the maternal viral population. J. Virol. 85:8253-62
    • (2011) J. Virol. , vol.85 , pp. 8253-8262
    • Russell, E.S.1    Kwiek, J.J.2    Keys, J.3    Barton, K.4    Mwapasa, V.5
  • 72
    • 0025244957 scopus 로고
    • Fitness of RNA virus decreased by Muller's ratchet
    • Chao L. 1990. Fitness of RNA virus decreased by Muller's ratchet. Nature 348:454-55
    • (1990) Nature , vol.348 , pp. 454-455
    • Chao, L.1
  • 73
    • 0026729636 scopus 로고
    • Rapid fitness losses in mammalian RNA virus clones due to Muller's ratchet
    • Duarte EA, Clarke DK, Moya A, Domingo E, Holland JJ. 1992. Rapid fitness losses in mammalian RNA virus clones due to Muller's ratchet. PNAS 89:6015-19
    • (1992) PNAS , vol.89 , pp. 6015-6019
    • Duarte, E.A.1    Clarke, D.K.2    Moya, A.3    Domingo, E.4    Holland, J.J.5
  • 74
    • 0345471842 scopus 로고    scopus 로고
    • Drastic fitness loss in human immunodeficiency virus type 1 upon serial bottleneck events
    • Yuste E, ͆anchez-Palomino S, Casado C, Domingo E, López-Gaĺindez C. 1999. Drastic fitness loss in human immunodeficiency virus type 1 upon serial bottleneck events. J. Virol. 73:2745-51
    • (1999) J. Virol. , vol.73 , pp. 2745-2751
    • Yuste, E.1    ͆anchez-Palomino, S.2    Casado, C.3    Domingo, E.4    López-Gaĺindez, C.5
  • 75
    • 0141633021 scopus 로고    scopus 로고
    • Resistance of virus to extinction on bottleneck passages: Study of a decaying and fluctuating pattern of fitness loss
    • LazaroE,Escarmís C,Pérez-Mercader J, Manrubia SC, DomingoE. 2003. Resistance of virus to extinction on bottleneck passages: study of a decaying and fluctuating pattern of fitness loss. PNAS 100:10830-35
    • (2003) PNAS , vol.100 , pp. 10830-10835
    • Lazaro, E.1    Escarmís, C.2    Pérez-Mercader, J.3    Manrubia, S.C.4    Domingo, E.5
  • 76
    • 34248359479 scopus 로고    scopus 로고
    • Fitness declines in Tobacco etch virus upon serial bottleneck transfers
    • de la Iglesia F, Elena SF. 2007. Fitness declines in Tobacco etch virus upon serial bottleneck transfers. J. Virol. 81:4941-47
    • (2007) J. Virol. , vol.81 , pp. 4941-4947
    • De La Iglesia, F.1    Elena, S.F.2
  • 78
    • 0028983653 scopus 로고
    • Mutation accumulation and the extinction of small populations
    • Lynch M, Conery JS, Bürger R. 1995. Mutation accumulation and the extinction of small populations. Am. Nat. 146:489-518
    • (1995) Am. Nat. , vol.146 , pp. 489-518
    • Lynch, M.1    Conery, J.S.2    Bürger, R.3
  • 79
    • 31144465690 scopus 로고    scopus 로고
    • Quasispecies diversity determines pathogenesis through cooperative interactions within a viral population
    • Vignuzzi M, Stone JK, Arnold JJ, Cameron CE, Andino R. 2006. Quasispecies diversity determines pathogenesis through cooperative interactions within a viral population. Nature 439:344-48
    • (2006) Nature , vol.439 , pp. 344-348
    • Vignuzzi, M.1    Stone, J.K.2    Arnold, J.J.3    Cameron, C.E.4    Andino, R.5
  • 80
    • 80053164707 scopus 로고    scopus 로고
    • Arbovirus high fidelity variant loses fitness in mosquitoes and mice
    • Coffey LL, Beeharry Y, Bordería AV, Blanc H, Vignuzzi M. 2011. Arbovirus high fidelity variant loses fitness in mosquitoes and mice. PNAS 108:16038-43
    • (2011) PNAS , vol.108 , pp. 16038-16043
    • Coffey, L.L.1    Beeharry, Y.2    Bordería, A.V.3    Blanc, H.4    Vignuzzi, M.5
  • 81
    • 84891753551 scopus 로고    scopus 로고
    • Experimental evolution of pseudogenization and gene loss in a plant RNA virus
    • Zwart MP, Willemsen A, Daròs JA, Elena SF. 2014. Experimental evolution of pseudogenization and gene loss in a plant RNA virus. Mol. Biol. Evol. 31:121-34
    • (2014) Mol. Biol. Evol. , vol.31 , pp. 121-134
    • Zwart, M.P.1    Willemsen, A.2    Daròs, J.A.3    Elena, S.F.4
  • 82
    • 44649128788 scopus 로고    scopus 로고
    • Low multiplicity of infection in vivo results in purifying selection against baculovirus deletion mutants
    • ZwartMP, Erro E, van Oers MM, de Visser JAGM, Vlak JM. 2008. Low multiplicity of infection in vivo results in purifying selection against baculovirus deletion mutants. J. Gen. Virol. 89:1220-24
    • (2008) J. Gen. Virol. , vol.89 , pp. 1220-1224
    • Zwart, M.P.1    Erro, E.2    Van Oers, M.M.3    De Visser, J.A.G.M.4    Vlak, J.M.5
  • 83
    • 0000907353 scopus 로고
    • The roles of mutation, inbreeding, crossbreeding and selection in evolution
    • Ithaca, N.Y., ed. DF Jones. Menasha, WI: Brooklyn Bot. Garden
    • Wright S. 1932. The roles of mutation, inbreeding, crossbreeding and selection in evolution. In Proc. Int. Congr. Genet., 6th, Ithaca, N.Y., ed. DF Jones, pp. 356-66. Menasha, WI: Brooklyn Bot. Garden
    • (1932) Proc. Int. Congr. Genet., 6th , pp. 356-366
    • Wright, S.1
  • 84
    • 84924919448 scopus 로고    scopus 로고
    • Simple genomes, complex interactions: Epistasis in RNA virus
    • Elena SF, Solé RV, Sardanyés J. 2010. Simple genomes, complex interactions: epistasis in RNA virus. Chaos 20:026106
    • (2010) Chaos , vol.20 , pp. 026106
    • Elena, S.F.1    Solé, R.V.2    Sardanyés, J.3
  • 85
    • 84864290431 scopus 로고    scopus 로고
    • Magnitude and sign epistasis among deleterious mutations in a positive-sense plant RNA virus
    • Lalíc J, Elena SF. 2012. Magnitude and sign epistasis among deleterious mutations in a positive-sense plant RNA virus. Heredity 109:71-77
    • (2012) Heredity , vol.109 , pp. 71-77
    • Lalíc, J.1    Elena, S.F.2
  • 86
    • 84894282840 scopus 로고    scopus 로고
    • Fitness valleys constrain HIV-1's adaptation to its secondary chemokine coreceptor
    • Da Silva J, Wyatt SK. 2014. Fitness valleys constrain HIV-1's adaptation to its secondary chemokine coreceptor. J. Evol. Biol. 27:604-15
    • (2014) J. Evol. Biol. , vol.27 , pp. 604-615
    • Da Silva, J.1    Wyatt, S.K.2
  • 87
    • 78650592680 scopus 로고    scopus 로고
    • Reciprocal sign epistasis is a necessary condition for multi-peaked fitness landscapes
    • Poelwijk FJ, Tənase-Nicola S, Kiviet DJ, Tans SJ. 2011. Reciprocal sign epistasis is a necessary condition for multi-peaked fitness landscapes. J. Theor. Biol. 272:141-44
    • (2011) J. Theor. Biol. , vol.272 , pp. 141-144
    • Poelwijk, F.J.1    Tənase-Nicola, S.2    Kiviet, D.J.3    Tans, S.J.4
  • 88
    • 0034632830 scopus 로고    scopus 로고
    • Evolvability of an RNA virus is determined by its mutational neighbourhood
    • Burch CL, Chao L. 2000. Evolvability of an RNA virus is determined by its mutational neighbourhood. Nature 406:625-28
    • (2000) Nature , vol.406 , pp. 625-628
    • Burch, C.L.1    Chao, L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.