-
1
-
-
0016629918
-
The bottleneck effect and genetic variability in populations
-
Nei M, Maruyama T, Chakaraborty R (1975) The bottleneck effect and genetic variability in populations. Evolution 29: 1-10.
-
(1975)
Evolution
, vol.29
, pp. 1-10
-
-
Nei, M.1
Maruyama, T.2
Chakaraborty, R.3
-
2
-
-
34547641090
-
Population bottlenecks as a potential major shaping force of human genome architecture
-
doi:10.1371/journal.pgen.0030119
-
Gherman A, Chen PE, Teslovich TM, Stankiewicz P, Withers M, et al. (2007) Population bottlenecks as a potential major shaping force of human genome architecture. PLoS Genet 3: e119. doi:10.1371/journal.pgen.0030119.
-
(2007)
PLoS Genet
, vol.3
-
-
Gherman, A.1
Chen, P.E.2
Teslovich, T.M.3
Stankiewicz, P.4
Withers, M.5
-
3
-
-
33644956987
-
The mutation load in small populations
-
Kimura M, Maruyama T, Crow JF (1963) The mutation load in small populations. Genetics 48: 1,303-1,312.
-
(1963)
Genetics
, vol.48
-
-
Kimura, M.1
Maruyama, T.2
Crow, J.F.3
-
4
-
-
0001771498
-
Evolution in Mendelian populations
-
Wright S (1931) Evolution in Mendelian populations. Genetics 16: 97-159.
-
(1931)
Genetics
, vol.16
, pp. 97-159
-
-
Wright, S.1
-
5
-
-
17444412727
-
Effective sizes of macroparasite populations: A conceptual model
-
Criscione CD, Blouin MS (2005) Effective sizes of macroparasite populations: a conceptual model. Trends Parasitol 21: 212-217.
-
(2005)
Trends Parasitol
, vol.21
, pp. 212-217
-
-
Criscione, C.D.1
Blouin, M.S.2
-
6
-
-
0019776310
-
Genetic drift and estimation of effective population size
-
Nei M, Tajima F (1981) Genetic drift and estimation of effective population size. Genetics 98: 625-640.
-
(1981)
Genetics
, vol.98
, pp. 625-640
-
-
Nei, M.1
Tajima, F.2
-
7
-
-
0021402210
-
Note on genetic drift and estimation of effective population size
-
Tajima F, Nei M (1984) Note on genetic drift and estimation of effective population size. Genetics 106: 569-574.
-
(1984)
Genetics
, vol.106
, pp. 569-574
-
-
Tajima, F.1
Nei, M.2
-
8
-
-
0015259854
-
The effective number of a population with overlapping generations: A correction and further discussion
-
Crow JF, Kimura M (1972) The effective number of a population with overlapping generations: a correction and further discussion. Am J Hum Genet 24: 1-10.
-
(1972)
Am J Hum Genet
, vol.24
, pp. 1-10
-
-
Crow, J.F.1
Kimura, M.2
-
9
-
-
34250157763
-
A potential bias in the temporal method for estimating Ne in admixed populations under natural selection
-
Araki H, Waples RS, Blouin MS (2007) A potential bias in the temporal method for estimating Ne in admixed populations under natural selection. Mol Ecol 16: 2,261-2,271.
-
(2007)
Mol Ecol
, vol.16
-
-
Araki, H.1
Waples, R.S.2
Blouin, M.S.3
-
10
-
-
31344454299
-
Estimation of effective population sizes from data on genetic markers
-
Wang J (2005) Estimation of effective population sizes from data on genetic markers. Philos Trans R Soc Lond B Biol Sci 360: 1,395-1,409.
-
(2005)
Philos Trans R Soc Lond B Biol Sci
, vol.360
-
-
Wang, J.1
-
11
-
-
4344571423
-
Temporal changes in allele frequencies and low effective population size in greater prairie-chickens
-
Johnson JA, Bellinger MR, Toepfer JE, Dunn P (2004) Temporal changes in allele frequencies and low effective population size in greater prairie-chickens. Mol Ecol 13: 2,617-2,630.
-
(2004)
Mol Ecol
, vol.13
-
-
Johnson, J.A.1
Bellinger, M.R.2
Toepfer, J.E.3
Dunn, P.4
-
12
-
-
0035102156
-
Transition between stochastic evolution and deterministic evolution in the presence of selection: General theory and application to virology
-
Rouzine IM, Rodrigo A, Coffin JM (2001) Transition between stochastic evolution and deterministic evolution in the presence of selection: general theory and application to virology. Microbiol Mol Biol Rev 65: 151-185.
-
(2001)
Microbiol Mol Biol Rev
, vol.65
, pp. 151-185
-
-
Rouzine, I.M.1
Rodrigo, A.2
Coffin, J.M.3
-
13
-
-
34249002682
-
Deterministic and stochastic regimes of asexual evolution on rugged fitness landscapes
-
Jain K, Krug J (2007) Deterministic and stochastic regimes of asexual evolution on rugged fitness landscapes. Genetics 175: 1,275-1,288.
-
(2007)
Genetics
, vol.175
-
-
Jain, K.1
Krug, J.2
-
14
-
-
0033756453
-
Models of experimental evolution: The role of genetic chance and selective necessity
-
Wahl LM, Krakauer DC (2000) Models of experimental evolution: the role of genetic chance and selective necessity. Genetics 156: 1,437-1,448.
-
(2000)
Genetics
, vol.156
-
-
Wahl, L.M.1
Krakauer, D.C.2
-
15
-
-
21044446722
-
Rapid evolutionary escape by large populations from local fitness peaks is likely in nature
-
Weinreich DM, Chao L (2005) Rapid evolutionary escape by large populations from local fitness peaks is likely in nature. Evolution Int J Org Evolution 59: 1,175-1,182.
-
(2005)
Evolution Int J Org Evolution
, vol.59
-
-
Weinreich, D.M.1
Chao, L.2
-
16
-
-
28344452016
-
Genetic rescue in interconnected populations of small and large size of the self-incompatible Ranunculus reptans
-
Willi Y, Fischer M (2005) Genetic rescue in interconnected populations of small and large size of the self-incompatible Ranunculus reptans. Heredity 95: 437-443.
-
(2005)
Heredity
, vol.95
, pp. 437-443
-
-
Willi, Y.1
Fischer, M.2
-
17
-
-
0027509085
-
Genetic bottlenecks and population passages cause profound fitness differences in RNA viruses
-
Clarke DK, Duarte EA, Moya A, Elena SF, Domingo E, et al. (1993) Genetic bottlenecks and population passages cause profound fitness differences in RNA viruses. J Virol 67: 222-228.
-
(1993)
J Virol
, vol.67
, pp. 222-228
-
-
Clarke, D.K.1
Duarte, E.A.2
Moya, A.3
Elena, S.F.4
Domingo, E.5
-
18
-
-
0025244957
-
Fitness of RNA virus decreased by Muller's ratchet
-
Chao L (1990) Fitness of RNA virus decreased by Muller's ratchet. Nature 348: 454-455.
-
(1990)
Nature
, vol.348
, pp. 454-455
-
-
Chao, L.1
-
20
-
-
0032902001
-
Exponential fitness gains of RNA virus populations are limited by bottleneck effects
-
Novella IS, Quer J, Domingo E, Holland JJ (1999) Exponential fitness gains of RNA virus populations are limited by bottleneck effects. J Virol 73: 1,668-1,671.
-
(1999)
J Virol
, vol.73
-
-
Novella, I.S.1
Quer, J.2
Domingo, E.3
Holland, J.J.4
-
21
-
-
0345471842
-
Drastic fitness loss in human immunodeficiency virus type 1 upon serial bottleneck events
-
Yuste E, Sanchez-Palomino S, Casado C, Domingo E, Lopez-Galindez C (1999) Drastic fitness loss in human immunodeficiency virus type 1 upon serial bottleneck events. J Virol 73: 2,745-2,751.
-
(1999)
J Virol
, vol.73
-
-
Yuste, E.1
Sanchez-Palomino, S.2
Casado, C.3
Domingo, E.4
Lopez-Galindez, C.5
-
22
-
-
33751021082
-
Stochastic or deterministic: What is the effective population size of HIV-1?
-
Kouyos RD, Althaus CL, Bonhoeffer S (2006) Stochastic or deterministic: what is the effective population size of HIV-1? Trends Microbiol 14: 507-511.
-
(2006)
Trends Microbiol
, vol.14
, pp. 507-511
-
-
Kouyos, R.D.1
Althaus, C.L.2
Bonhoeffer, S.3
-
24
-
-
4544331687
-
Genetic bottlenecks reduce population variation in an experimental RNA virus population
-
Li H, Roossinck MJ (2004) Genetic bottlenecks reduce population variation in an experimental RNA virus population. J Virol 78: 10,582-10,587.
-
(2004)
J Virol
, vol.78
-
-
Li, H.1
Roossinck, M.J.2
-
25
-
-
33144462048
-
Distinct viral populations differentiate and evolve independently in a single perennial host plant
-
Jridi C, Martin JF, Marie-Jeanne V, Labonne G, Blanc S (2006) Distinct viral populations differentiate and evolve independently in a single perennial host plant. J Virol 80: 2,349-2,357.
-
(2006)
J Virol
, vol.80
-
-
Jridi, C.1
Martin, J.F.2
Marie-Jeanne, V.3
Labonne, G.4
Blanc, S.5
-
26
-
-
0242406908
-
Evolution of Wheat streak mosaic virus: Dynamics of population growth within plants may explain limited variation
-
French R, Stenger DC (2003) Evolution of Wheat streak mosaic virus: dynamics of population growth within plants may explain limited variation. Annu Rev Phytopathol 41: 199-214.
-
(2003)
Annu Rev Phytopathol
, vol.41
, pp. 199-214
-
-
French, R.1
Stenger, D.C.2
-
27
-
-
0141458956
-
Estimation of population bottlenecks during movement of tobacco mosaic virus in tobacco plants
-
Sacristan S, Malpica JM, Fraile A, Garcia-Arenal F (2003) Estimation of population bottlenecks during movement of tobacco mosaic virus in tobacco plants. J Virol 77: 9,906-9,911.
-
(2003)
J Virol
, vol.77
-
-
Sacristan, S.1
Malpica, J.M.2
Fraile, A.3
Garcia-Arenal, F.4
-
29
-
-
27744473493
-
Population structure within lineages of Wheat streak mosaic virus derived from a common founding event exhibits stochastic variation inconsistent with the deterministic quasi-species model
-
French R, Stenger DC (2005) Population structure within lineages of Wheat streak mosaic virus derived from a common founding event exhibits stochastic variation inconsistent with the deterministic quasi-species model. Virology 343: 179-189.
-
(2005)
Virology
, vol.343
, pp. 179-189
-
-
French, R.1
Stenger, D.C.2
-
30
-
-
41549155482
-
Quantitative Single-letter Sequencing: A method for simultaneously monitoring numerous known allelic variants in single DNA samples
-
Monsion B, Duborjal H, Blanc S (2008) Quantitative Single-letter Sequencing: a method for simultaneously monitoring numerous known allelic variants in single DNA samples. BMC Genomics 9: 85.
-
(2008)
BMC Genomics
, vol.9
, pp. 85
-
-
Monsion, B.1
Duborjal, H.2
Blanc, S.3
-
31
-
-
0019046844
-
Nucleotide sequence of cauliflower mosaic virus DNA
-
Franck A, Guilley H, Jonard J, Richards K, Hirth L (1980) Nucleotide sequence of cauliflower mosaic virus DNA. Cell 21: 285-294.
-
(1980)
Cell
, vol.21
, pp. 285-294
-
-
Franck, A.1
Guilley, H.2
Jonard, J.3
Richards, K.4
Hirth, L.5
-
32
-
-
0026540733
-
Temporal fluctuations in demographic parameters and the genetic variance among populations
-
Whitlock MC (1992) Temporal fluctuations in demographic parameters and the genetic variance among populations. Evolution 46: 608-615.
-
(1992)
Evolution
, vol.46
, pp. 608-615
-
-
Whitlock, M.C.1
-
33
-
-
0024821459
-
Competition between isolates and variants of cauliflower mosaic virus in infected turnip plants
-
Zhang XS, Melcher U (1989) Competition between isolates and variants of cauliflower mosaic virus in infected turnip plants. J Gen Virol 70: 3,427-3,437.
-
(1989)
J Gen Virol
, vol.70
-
-
Zhang, X.S.1
Melcher, U.2
-
34
-
-
0026762341
-
The mode of cauliflower mosaic virus propagation in the plant allows rapid amplification of viable mutant strains
-
Riederer MA, Grimsley NH, Hohn B, Jiricny J (1992) The mode of cauliflower mosaic virus propagation in the plant allows rapid amplification of viable mutant strains. J Gen Virol 73(Part 6): 1449-1456.
-
(1992)
J Gen Virol
, vol.73
, Issue.PART 6
, pp. 1449-1456
-
-
Riederer, M.A.1
Grimsley, N.H.2
Hohn, B.3
Jiricny, J.4
-
35
-
-
0141730419
-
Fluorescent labelling reveals spatial separation of potyvirus populations in mixed infected Nicotiana benthamiana plants
-
Dietrich C, Maiss E (2003) Fluorescent labelling reveals spatial separation of potyvirus populations in mixed infected Nicotiana benthamiana plants. J Gen Virol 84: 2,871-2,876.
-
(2003)
J Gen Virol
, vol.84
-
-
Dietrich, C.1
Maiss, E.2
-
36
-
-
33749536223
-
Rapid high-yield expression of full-size IgG antibodies in plants coinfected with noncompeting viral vectors
-
Giritch A, Marillonnet S, Engler C, van Eldik G, Botterman J, et al. (2006) Rapid high-yield expression of full-size IgG antibodies in plants coinfected with noncompeting viral vectors. Proc Natl Acad Sci U S A 103: 14,701-14,706.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
-
-
Giritch, A.1
Marillonnet, S.2
Engler, C.3
van Eldik, G.4
Botterman, J.5
-
37
-
-
42649119104
-
Analysis of the spatial distribution of identical and two distinct virus populations differently labeled with cyan and yellow fluorescent proteins in coinfected plants
-
Takahashi T, Sugawara T, Yamatsuta T, Isogai M, Natsuaki T, et al. (2007) Analysis of the spatial distribution of identical and two distinct virus populations differently labeled with cyan and yellow fluorescent proteins in coinfected plants. Phypathology 97: 1,200-1,206.
-
(2007)
Phypathology
, vol.97
-
-
Takahashi, T.1
Sugawara, T.2
Yamatsuta, T.3
Isogai, M.4
Natsuaki, T.5
-
38
-
-
18044386958
-
Recombination every day: Abundant recombination in a virus during a single multi-cellular host infection
-
doi:10.1371/journal.pbio. 0030089
-
Froissart R, Roze D, Uzest M, Galibert L, Blanc S, et al. (2005) Recombination every day: abundant recombination in a virus during a single multi-cellular host infection. PLoS Biol 3: e89. doi:10.1371/journal.pbio. 0030089.
-
(2005)
PLoS Biol
, vol.3
-
-
Froissart, R.1
Roze, D.2
Uzest, M.3
Galibert, L.4
Blanc, S.5
|